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Conserved domains on  [gi|608624849|gb|AHW53149|]
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olfactory receptor family 13, partial [Vampyrum spectrum]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
1-234 2.67e-130

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15430:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 270  Bit Score: 368.24  E-value: 2.67e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15430   36 YFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15430  116 LCVQMAAGSWVTGFLNSLVETVLAMQLPFCGnNVINHFTCEILAVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15430  196 FILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
 
Name Accession Description Interval E-value
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
1-234 2.67e-130

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 368.24  E-value: 2.67e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15430   36 YFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15430  116 LCVQMAAGSWVTGFLNSLVETVLAMQLPFCGnNVINHFTCEILAVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15430  196 FILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
1-233 5.39e-32

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 117.99  E-value: 5.39e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849    1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:pfam13853  30 YLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVDRFVAICSPLRYTTILTNP 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   81 VCVQMATVSWMTGCLTALLETSLALRLPLCGN-LIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:pfam13853 110 VISRIGLGVSVRSFILVLPLPFLLRRLPFCGHhVLSHSYCLHMGLARLSCADIKVNNIYGLFVVTSTFGIDSLLIVLSYG 189
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849  160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAA--LSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:pfam13853 190 LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMigLSMVHRFGHNVPPLLQIMMANAYLFFPPVLNPIVYSVK 265
 
Name Accession Description Interval E-value
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
1-234 2.67e-130

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 368.24  E-value: 2.67e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15430   36 YFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15430  116 LCVQMAAGSWVTGFLNSLVETVLAMQLPFCGnNVINHFTCEILAVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15430  196 FILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
1-234 9.43e-120

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 341.74  E-value: 9.43e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15225   36 YFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15225  116 VCLQLVAGSWLSGILVSLGQTTLIFSLPFCGsNEINHFFCDIPPVLKLACADTSLNEIAIFVASVLVILVPFLLILVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15225  196 FIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLSLFYTVVTPMLNPIIYSLRN 270
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
1-234 4.87e-116

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 332.14  E-value: 4.87e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd13954   36 YFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd13954  116 VCILLAAGSWLIGFLNSLIHTVLISQLPFCGsNVINHFFCDIPPLLKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd13954  196 YIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSSSYSSDLDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
1-234 9.70e-110

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 316.14  E-value: 9.70e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15237   36 YFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15237  116 VCVRLAATSWASGFLNSLVLTSLTLRLPFCGpNHINHFFCEAPAVLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15237  196 RILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSPDQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
1-234 6.66e-107

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 309.15  E-value: 6.66e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15431   36 YFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLEtSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15431  116 VCIQLAAGSWVSAFLLTVIP-VLTMPLHFCGpNVINHFFCEVQALLKLACSDTSLNEILMFATSIFTLLLPFSFILVSYI 194
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15431  195 RIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKSSSDQDKIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
1-234 5.36e-103

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 299.04  E-value: 5.36e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15230   36 YFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15230  116 VCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGsNVINHFFCDIPPLLKLSCSDTHINELVLFAFSGFIGLSTLLIILISYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15230  196 YILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
1-234 1.56e-99

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 290.29  E-value: 1.56e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15947   36 YFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15947  116 LCVQLAALSWLSGLANSLLQTTLTLQLPLCGhHTLDHFFCEVPALIKLACVDTTFNELELFVASVFFLLVPLSLILVSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15947  196 FIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSSYSQDQGKFISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
1-234 1.67e-99

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 290.46  E-value: 1.67e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15429   36 YFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15429  116 LCIQLAAASWTSGFLNSLVQTAFTFRLPFCGhNTINHFSCELLAVVRLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15429  196 HIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSGSSALQEKMISLFYAVVTPMLNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
1-234 5.54e-99

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 289.07  E-value: 5.54e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15421   36 YFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCGNL-IDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15421  116 VCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSReIHHFFCEVPALLKLSCADTSAYETVVYVSGVLFLLIPFSLILASYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15421  196 LILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGSYHSPEQDKVVSVFYTILTPMLNPLIYSLRN 270
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
1-234 6.16e-99

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 289.16  E-value: 6.16e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15231   36 YFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15231  116 VCLQLAAASWLCGFLNSAVHTVLTFRLSFCGsNQISHFFCDIPPLLKLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15231  196 YIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSGYSLDKDTLISVLYSIVTPMLNPIIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
1-234 1.86e-98

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 287.46  E-value: 1.86e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15911   36 YFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLLAVMSYDRYLAICKPLHYASLMNGR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15911  116 LCLQLAAGSWISGFLASTITVILMSQLTFCGpNEIDHFFCDFAPLLKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15911  196 CIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTNTSRDLNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
1-234 4.41e-98

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 286.69  E-value: 4.41e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15912   36 YFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15912  116 VCLQLVLGSWVGGFLLILPPTILVFQLPFCGpNVINHFFCDSGPLLKLSCSDTRLIELLDFILASVVLLGSLLLTIVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15912  196 YIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQSSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
1-234 4.61e-97

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 284.22  E-value: 4.61e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15420   36 YFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15420  116 VCTTLAATSWACGFLLALVHVVLLLRLPFCGpNEVNHFFCEILAVLKLACADTWINEILIFAGCVFILLGPFSLILISYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15420  196 HILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSAEQEKILSLFYSLFNPMLNPLIYSLRN 270
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
1-234 8.75e-95

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 278.18  E-value: 8.75e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15227   36 YFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALLTVMAYDRYVAICHPLHYEVIMNRG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15227  116 ACVQMAAASWLSGLLYGALHTANTFSLPFCGsNVIHQFFCDIPQLLKLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15227  196 HIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDSPSLLDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
1-234 1.13e-94

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 278.33  E-value: 1.13e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15229   36 YFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15229  116 VCVQLVGGAWALGFLYALINTLLLLNLHFCGpNEINHFSCELPSLLPLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15229  196 HIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASSSVLDRVFSIQYSILTPMLNPIIYSLKN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
1-234 1.89e-92

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 272.59  E-value: 1.89e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15417   36 YFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15417  116 LCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGpNVIDHFFCDIPPLLSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15417  196 YIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSSSHSQDQDKVASVFYTVVIPMLNPLIYSLRN 270
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
1-234 2.15e-92

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 273.04  E-value: 2.15e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15408   49 YFFLSHLSFLDICYSSTITPKTLLNLLAERKVISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQR 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15408  129 VCVSLVAGSYLAGFLNSTVHTGFILRLSFCGsNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYT 208
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15408  209 YILATILRMRSAEGRHKAFSTCASHLTAVTLFYGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRN 283
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
1-234 5.33e-92

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 271.40  E-value: 5.33e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15235   37 YFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPK 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15235  117 RCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGsNEIPHFFCDLQPLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYA 196
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15235  197 RILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSSSYSADKDRVATVMYTVVTPMLNPFIYSLRN 271
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
1-234 4.05e-91

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 270.00  E-value: 4.05e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15943   50 YFFLSHLSFLDLCYSSAITPKMLVNFLAENKTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPR 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15943  130 VCIQLVAGSYLIGFVNALIQTICTFRLPFCGsNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYV 209
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15943  210 YILSAILRIHSSEGRRKAFSTCASHLMAVTIFYGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRN 284
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
1-234 4.28e-91

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 269.35  E-value: 4.28e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15432   36 YFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15432  116 LCQQLAAGAWISGFANSLVQSTLTLKMPRCGrRRVDHFFCEVPALLKLSCVDTTANEAELFVISVLLLLIPLGLILISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15432  196 FIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSNSSHDRGKMVALFYGIITPMLNPLIYTLRN 270
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
1-234 2.77e-90

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 267.32  E-value: 2.77e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15434   36 YFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCGN-LIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15434  116 LCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHhRVDHFFCEMPALIKLACVDTTAYEATIFALGVFILLFPLSLILVSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15434  196 YIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSVSQDQGKFLTLFYTIVTPSLNPLIYTLRN 270
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
1-234 2.08e-89

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 264.86  E-value: 2.08e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15918   36 YFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15918  116 LCILLVAASWVITNLHSLLHTLLMARLSFCAsNEIPHFFCDLNPLLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15918  196 RIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHSASKDSVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
1-234 5.51e-88

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 261.48  E-value: 5.51e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15411   36 YFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLLGLMAYDRYVAICNPLLYTVVMSRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15411  116 VCLKLAAGSYAAGFLNSLIHTTLISRLSFCGsNVINHFFCDTPPLLKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYT 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15411  196 YILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSSYSLGQDKVASVFYTVVIPMLNPLIYSLRN 270
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
1-234 2.24e-87

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 259.52  E-value: 2.24e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15224   36 YFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVLLAVMAYDRYVAICHPLRYPVIMTHQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15224  116 LCVQLAAGSWLSGFLISMIKVYFISQLSFCGpNVINHFFCDISPLLNLSCTDMSLAELVDFILALIILLVPLLVTVASYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15224  196 CIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAISSFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
1-234 4.22e-87

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 259.16  E-value: 4.22e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15419   36 YFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15419  116 VCVQLVAGSYLCGCINSIIQTSFTFSLSFCGsNEIDHFFCDVPPLLKLSCSDTFINELVMFVLCGLIIVSTILVILVSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15419  196 YILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGAVSSPEQSKVVSVFYTLVIPMLNPLIYSLRN 270
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
1-234 7.76e-85

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 254.12  E-value: 7.76e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15410   49 YFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKAISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRK 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15410  129 LCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGsNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYV 208
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15410  209 FIIVTILRIRSAEGRQKAFSTCASHLTAITIFHGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRN 283
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
1-234 1.29e-84

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 252.56  E-value: 1.29e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15232   36 YFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKE 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15232  116 VCVGLATGVWAIGMLNSAVHTGLMLRLSFCGpNIINHFFCEIPPLLLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15232  196 FIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSPEKDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
1-234 2.01e-84

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 252.23  E-value: 2.01e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15915   36 YFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15915  116 VCLLLAVACWVTGFFHALMHTVMTSRLPFCGpNKINHFFCDIKPLLKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRIS-SAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15915  196 YIISFLLLKVrSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDSLEQDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
1-234 2.36e-82

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 247.01  E-value: 2.36e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15946   36 YFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLFSVMAYDRYVAICHPLRYKVIMSWG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15946  116 LCILMVAGSWVCGVFSSLLHTFFTMRLPYCGpNEINHYFCEVPAVLKLACADTSLNEMVDFVLGVIVLVVPLSLILASYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15946  196 NIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYSPERDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
1-234 4.54e-82

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 246.55  E-value: 4.54e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15409   36 YFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15409  116 LCVQLITASYIGGFLHSMIHVGLTFRLSFCGsNEINHFFCDIPPLLKISCTDPSINELVLFIFSGSIQVFTILTVLISYS 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15409  196 YILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYALDQDMMDSLFYTIVIPLLNPFIYSLRN 270
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
1-234 7.32e-82

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 245.80  E-value: 7.32e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15424   36 YFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRW 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15424  116 RQLQLALSCWAIGFLLSVINVGCTLRHPFCGpNHINHFFCELPVVLKLACADTHITEAIVFGAGVLILLVPLSVILTSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15424  196 LILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTPDRDKQIAVFYIVITPLLNPIIYTLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
1-234 1.73e-81

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 245.00  E-value: 1.73e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15412   36 YFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15412  116 VCISLVTFPYIYGFLNGLIQTILTFRLSFCGsNVINHFYCADPPLIKLSCSDTYVKETAMFIVAGFNLSSSLLIILISYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15412  196 FILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVEQSKIVAVFYTFVSPMLNPLIYSLRN 270
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
1-234 5.86e-81

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 243.43  E-value: 5.86e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15416   36 YFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15416  116 VCVLLVAASYLGGCLNALVFTTCVFSLSFCGpNEINHFFCDFPPLLKLSCSDIRLAKILPSISSGIIILVTVLTIIISYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15416  196 YILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSMDQNKVVSVFYMVVIPMLNPLIYSLRN 270
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
1-234 2.11e-79

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 240.03  E-value: 2.11e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15945   49 YYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKSIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRR 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15945  129 VCYLLLVGAYLSGMATSLVHTTLTFRLSFCGsNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYC 208
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15945  209 YIIITVLKIRSAEGRFKAFSTCASHLTAVGLFYGTLLFMYLRPSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRN 283
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
1-234 8.47e-79

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 237.65  E-value: 8.47e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15914   36 YFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15914  116 LCTQLAAGCWLCGFLGPVPEIILISTLPFCGpNQIQHIFCDFPPLLSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15914  196 KIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKSYSLDYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
1-234 8.95e-79

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 238.42  E-value: 8.95e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15406   45 YYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPR 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15406  125 VCSLLVAGVYIMGLIGATVHTSCMLRLSFCGdNVINHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYA 204
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15406  205 FILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSSMTQEKVSSVFYTTVIPMLNPLIYSLRN 279
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
1-234 2.04e-78

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 237.09  E-value: 2.04e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15234   36 YFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPC 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCGNL-IDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15234  116 LCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVeIPHFFCELAQVLKLACSDTLINNILIYLATVIFGGIPLSGIIFSYY 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15234  196 KIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSAVTHSSRKTAVASVMYTVVTPMLNPFIYSLRN 270
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
1-234 3.55e-78

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 236.06  E-value: 3.55e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15913   36 YILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15913  116 LCGKLVAFCWVCGFLWFLIPVVLISQLPFCGpNIIDHFLCDPGPLLALSCVPAPGTELICYTLSSLIIFGTFLFILGSYT 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15913  196 LVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGNSTGMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
1-234 4.60e-78

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 235.57  E-value: 4.60e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15939   36 YFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15939  116 VCGLLVGVAWVGGFLHSTIQILLTLQLPFCGpNVIDHFFCDLFPLLKLACTDTYVIGLLVVANSGLICLLSFLILLISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTiLRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15939  196 VILYS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVTTFP--IDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
1-234 1.32e-77

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 235.00  E-value: 1.32e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15415   36 YFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15415  116 VCVQLVAGSYLGGLINSLTHTIGLLKLSFCGpNVINHYFCDIPPLLKLSCSDTHINELLLLTFSGVIAMSTLLTIIISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15415  196 FILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQYSLEQEKVSAVFYTLVIPMLNPLIYSLRN 270
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
1-234 5.19e-77

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 233.86  E-value: 5.19e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15414   36 YFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15414  116 VCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGpNVINHFFCDIPPLLSLSCADTQINKWVLFIMAGALGVLSGLIILVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15414  196 YILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSSSSSLDLDKVVSVFYTAVIPMLNPLIYSLRN 270
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
1-234 6.93e-77

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 233.14  E-value: 6.93e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15428   36 YFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECALLSVMSYDRYVAICLPLRYSLIMTWK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15428  116 VCISLATGSWVGGLLVSAVDTAFTLNLSFGGhNKINHFLCEMPALLKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYT 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15428  196 RIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSSTSKEYDKMISVFYIIVTPMLNPLIYSLRN 270
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
1-234 7.80e-77

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 232.98  E-value: 7.80e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15413   36 YFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLLSAMAYDRYVAICNPLLYTVIMSQR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15413  116 VCIVLVAIPYLYSFFVALFHTIKTFRLSFCGsNVINHFYCDDLPLLALSCSDTHEKELIILIFAGFNLISSLLIVLVSYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15413  196 FILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSLDTDKMASVFYTLVIPMLNPLIYSLRN 270
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
1-234 2.28e-73

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 223.62  E-value: 2.28e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15226   36 YFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15226  116 MCILLVVASWIIGFIHSLSQLAFVVNLPFCGpNVVDSFFCDLPLVIKLACTDTYVLELMVVANSGLISLVCFLLLLISYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTIlRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15226  196 VILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFP--VDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
1-234 7.01e-72

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 220.81  E-value: 7.01e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15944   49 YFFLCNLSFCDLGYSSAIAPRMLADFLTKHKVISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKR 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15944  129 VCLQLMAGSYLAGLVNLVIHTTATFSLSFCGsNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYL 208
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15944  209 FILVAILRMRSAEGRRKAFSTCASHFTGVTLFYGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRN 283
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
1-234 7.17e-72

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 220.01  E-value: 7.17e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15940   36 YFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15940  116 VCLWLVAALWLGGTVHSLAQTFLTIRLPYCGpNEIDSFFCDVPPVIKLACTDTYLIDILIVSNSGLISLVCFVALLGSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSaEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15940  196 VILVSLRKRST-EGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTSFS--EDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
1-234 1.08e-71

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 220.10  E-value: 1.08e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLS-SQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNR 79
Cdd:cd15941   37 YHFLGHLSFLDACLSSVTVPKVLAGLLTlSGRTISFEGCVVQLYAFHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNR 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  80 QVCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISY 158
Cdd:cd15941  117 RMCAGLAGGTWATGATHAAIHTSLTFRLPYCGpCQIAYFFCDIPPVLKLACADTTINELVILANIGIVAAGCFLLIVISY 196
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 159 IFILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPssSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15941  197 IYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQP--SSSQAGAGAPAVFYTIVTPMLNPFIYTLRN 270
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
1-234 1.41e-71

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 219.61  E-value: 1.41e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15228   36 YFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15228  116 VCALLAAGTWITSSFHATILTSLTFTLPYCGsNVVDYFFCDIFPVLKLACADTSIAETVSFTNVGLVPLTCFLLILASYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15228  196 RIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPV--LVTPVQIFNNVVTPMLNPLIYTLRN 268
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
1-234 1.94e-71

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 219.27  E-value: 1.94e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15418   37 YFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKK 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15418  117 LCMGLVAASYLGGFANAIIHTSNTFRLHFCGdNIIDHFFCDLPPLVKLACDDTRVYELILYFILGFNVIAPTALILASYT 196
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15418  197 FILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSHTPDRDKVVALFYTVVNPLLNPLIYSLRN 271
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
1-234 4.71e-71

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 218.09  E-value: 4.71e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQ-KTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNR 79
Cdd:cd15916   36 YIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFFHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  80 QVCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISY 158
Cdd:cd15916  116 RLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGpNRIDYFFCDIPPLLKLACADTTINELVIFASIGVVALGCFILILLSY 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 159 IFILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15916  196 GNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEA--LDGVIAVFYTVVTPLLNPLIYTLRN 269
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
1-234 4.84e-71

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 218.12  E-value: 4.84e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15433   36 YYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15433  116 LCQTLASISWLSGFVNSVAQTGLLAERPLCGhRLLDHFFCEMPVFLKLACGDDETTEVQMFVARVVILLLPAALILGSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15433  196 HVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAHGKFVSLFYTVMTPALNPLIYTLRN 270
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
1-234 2.31e-70

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 216.52  E-value: 2.31e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15407   36 YFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLLASMAYDRHAAVCKPLHYTTTMTTK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15407  116 VCACLTIGCYVCGFLNASIHTGNTFRLSFCKsNVINHFFCDIPPVLALSCSDIHISEIVLFFLASFNVFFALLVILISYL 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15407  196 FIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMDTDKMASVFYTMVIPMLNPLVYSLRN 270
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
1-234 7.57e-68

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 209.88  E-value: 7.57e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15936   36 YFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15936  116 VCTGLVAGSWLGGFAHSIVQVALLLQLPFCGpNVLDNFYCDVPQVIKLACTDTFLLELLMVSNSGLVTLLIFFILLISYT 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTIlRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15936  196 VILVKI-RTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFP--MDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
1-234 2.55e-66

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 206.11  E-value: 2.55e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15405   36 YFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15405  116 VCSLLMLGSYVMGFAGAMAHTGCMLRLTFCdSNIINHYMCDILPLLQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15405  196 LILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSVNQGKVSSVFYTNVVPMLNPLIYSLRN 270
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
1-234 3.03e-64

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 200.76  E-value: 3.03e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15236   36 YFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPE 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15236  116 LCVLLVAGSWVLTCFHALLHTLLLARLSFCaDNVIPHFFCDLVALLKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15236  196 RIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSSDKDIVASVMYTVVTPMLNPFIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
1-234 4.30e-63

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 198.09  E-value: 4.30e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15233   36 YFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15233  116 VQTALVGISCACAFTNALTHTVAMSTLKFCGpNVINHFFCDLPPLFQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15233  196 HVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSVYSSDKDKVIGILNTVLSPMLNPLIYSLRN 270
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
1-234 1.27e-60

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 191.49  E-value: 1.27e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15942   36 YWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15942  116 ACLCLSLGTWLGGCLHSTFQTSLTFRLPYGqKNEVDYIFCDIPAMLKLACADTAFNELVTFIDIGLVAMTCFLLILMSYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15942  196 YIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQDP--LDGVVAVFYTTVTPLLNPVIYTLRN 268
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
1-234 5.90e-60

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 189.70  E-value: 5.90e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15938   36 YFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15938  116 LCWVLVAASWAGGFLHSIVQTLLTIQLPFCGpNQVNNFFCDVPPVIKLACTDTCVTELLMVSNSGLISTVCFVVLVTSYT 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILstiLRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15938  196 TIL---VTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFP--VDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
1-234 3.12e-58

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 185.35  E-value: 3.12e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15935   37 YFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQ 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15935  117 LCIKLLAACWAGGFLHSATQAALVLRLPFCGpNELDNFYCDVPQVIKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYG 196
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTiLRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15935  197 IILTT-LRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSS--VDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
1-234 4.14e-54

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 174.54  E-value: 4.14e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15937   36 YFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15937  116 VCCVLVGASWAGGFIHSIIQVALIIRLPFCGpNVLDNFFCDITQVIKLACTNTYTVELLMFSNSGLVILLCFLLLLISYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 608624849 160 FILSTiLRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKPSSSSSqeVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15937  196 FLLAK-LRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFP--MDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
1-234 2.45e-51

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 167.85  E-value: 2.45e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15223   36 YILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLVMALDRYVAICKPLRYPSIITKS 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15223  116 FILKLVLFALIRSGLLVLPIVVLASQLSYCSsNVIEHCYCDHMALVSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15223  196 LILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLtyRFGKTIPPDVHVLLSVLYILIPPALNPIIYGVRT 272
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
1-233 1.50e-46

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 155.65  E-value: 1.50e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15950   36 YYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGVLLAMAFDRYVAICHPLRYSAILTSQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15950  116 VIAQIGLAIVLRALLFMTPLTCLVTSLPYCGsRVVPHSYCEHMAVVKLACADPRPSSLYSITGSTLVVGTDSAFIAVSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYY-GAALSMYLKP-SSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15950  196 LILRAVLGLSSKEARLKAFSTCGSHVCVILLFYiPGLLSIYTQRfGQGVPPHTQVLLADLYLLVPPMLNPIIYGMR 271
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
1-234 9.76e-46

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 153.21  E-value: 9.76e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15917   36 YLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAMESGVLLAMAFDRYVAICYPLRYTTILTNT 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15917  116 VVGKIGLAILLRAVALIIPLPLLVRRLPYCGsNVISHSYCEHMAVVKLACGDTRVNSIYGLFVALLIVGFDLLFIALSYV 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15917  196 LILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLthRFGHHVPPHVHILLANLYLLLPPMLNPIVYGVRT 272
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
1-233 2.22e-42

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 144.74  E-value: 2.22e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15221   36 YLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAILLAMAFDRYVAICYPLRYTTILTHS 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15221  116 VIGKIGVAAVARSFCIVFPFVFLLKRLPYCGhNVIPHTYCEHMGIARLACADITVNIWYGLTVALLTVGLDVVLIAVSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15221  196 LILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLthRFGRHIPRHVHILLANLYVLVPPMLNPIVYGVK 271
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
1-234 5.98e-41

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 140.94  E-value: 5.98e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15951   36 YLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGIFVAMALDRYVAICNPLRHSTILTNS 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15951  116 VVAKIGLAVVLRGGILVSPHPFLLRRLPYCrTNIIPHTYCEHMAVVKLACADTRVSRAYGLSVAFLVGGLDVIFIAVSYI 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15951  196 QILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLthRFGHNVPPHVHILIANVYLLVPPMLNPIIYGVRT 272
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
1-234 9.73e-41

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 140.48  E-value: 9.73e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15953   36 YLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVLVAMAFDRYVAICNPLRYATILTNS 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCGN-LIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15953  116 RIAKLGLVGLIRGVLLILPLPLLLSRLPFCANrIIPHTYCEHMAVVKLACGDTTINRIYGLVVALLVVGLDLLLIALSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15953  196 LIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLthRFGQGIAPHIHIILANLYLLVPPMLNPIIYGVKT 272
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
1-233 1.30e-39

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 137.51  E-value: 1.30e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15952   36 FYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVLVAMAFDRYVAICNPLRYTTILTNK 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACAsSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15952  116 VISVIALGIVLRPLLLVLPFVFLILRLPFCGhNIIPHTYCEHMGIAKLACA-SIRINIIYGLFAISVLVLDVILIALSYV 194
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15952  195 LILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLthRFGHNIPRYIHILLANLYVVLPPMLNPVIYGVR 270
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
1-231 1.49e-38

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 134.94  E-value: 1.49e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMY----LSlAMGSTecVLLAvMAYDRYVAICNPLRYPVI 76
Cdd:cd15222   36 YYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFfihtFS-FMESS--VLLA-MAFDRFVAICNPLRYASI 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  77 MNRQVCVQMATVSWMTGCLTALLETSLALRLPLCG-NLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFIC 155
Cdd:cd15222  112 LTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHsNVLSHSYCLHQDVMKLACSDTRVNSIYGLFVVLSTMGLDSLLIL 191
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 608624849 156 ISYIFILSTILRISSAEGRNKAFSTCGAHLTVVILYYG--AALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYS 231
Cdd:cd15222  192 LSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVpmIGLSMVHRFGKHASPLVHVLMANVYLLVPPVLNPIIYS 269
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
1-233 3.05e-34

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 123.86  E-value: 3.05e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15948   37 FYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIMESAVLLAMAFDRYVAICNPLRYATILTNS 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15948  117 VITKIGLAALARAVTLMTPLPFLLRRLPYCrSHVIAHCYCEHMAVVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYV 196
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAAL--SMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15948  197 FILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVlsSTMHRFARHVAPHVHILLANFYLLFPPMMNPIVYGVK 272
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
1-233 1.44e-33

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 122.19  E-value: 1.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15949   52 YFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNT 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15949  132 TVIRIGLAAVIRGVLYISPLPLLVRRLPWYrTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYI 211
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYG--AALSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15949  212 MILRVVQRLATSEARLKTFGTCVSHVCAILAFYVpiAVSSLIHRFGQNVPPPTHILLANFYLLIPPMLNPIVYGVR 287
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
1-233 4.12e-33

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 120.74  E-value: 4.12e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15956   36 FLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAMESGVLVAMALDRFVAICNPLHYATILTLE 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLCGN-LIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15956  116 VVAKAGLLLALRGVAIVIPFPLLVCRLSFCAShTIAHTYCEHMAVVKLACGATTVDSLYGLALALFIGGGDVLFIAYSYG 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL----KPSSSSSQEVdkIISLLYGVLTPMLNPIIYSFR 233
Cdd:cd15956  196 LIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLmhrfGHSVPSAAHV--LLSNLYLLLPPALNPIVYGIR 271
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
1-230 1.14e-32

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 119.54  E-value: 1.14e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15954   36 YYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGVLMLMALDRYVAICYPLRYATILTNP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSLALRLPLC-GNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:cd15954  116 VITKAGLATFLRGVMLIIPFPLLTKRLPYCrGNFIPHTYCDHMSVVKLACANIRVDAIYGLMVALLIGGFDILCISVSYA 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 608624849 160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYLKP---SSSSSQEVDKIISLLYGVLTPMLNPIIY 230
Cdd:cd15954  196 MILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHrfgGHHITPHIHIIMANLYLLLPPMMNPIVY 269
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
1-233 5.39e-32

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 117.99  E-value: 5.39e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849    1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:pfam13853  30 YLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVDRFVAICSPLRYTTILTNP 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   81 VCVQMATVSWMTGCLTALLETSLALRLPLCGN-LIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYI 159
Cdd:pfam13853 110 VISRIGLGVSVRSFILVLPLPFLLRRLPFCGHhVLSHSYCLHMGLARLSCADIKVNNIYGLFVVTSTFGIDSLLIVLSYG 189
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 608624849  160 FILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAA--LSMYLKPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFR 233
Cdd:pfam13853 190 LILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMigLSMVHRFGHNVPPLLQIMMANAYLFFPPVLNPIVYSVK 265
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
1-230 4.52e-29

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 109.69  E-value: 4.52e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849    1 YFFLGNLSFMDICYTSASIPTLLV-NLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNR 79
Cdd:pfam00001  20 NIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAISIDRYLAIVHPLRYKRRRTP 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   80 QVCVQMATVSWMTGCLTALLETSLALRLPLCGNliDHFTCEILAVLKLACASSLLMdvtllVVSVLLLPIPMLFICISYI 159
Cdd:pfam00001 100 RRAKVLILVIWVLALLLSLPPLLFGWTLTVPEG--NVTVCFIDFPEDLSKPVSYTL-----LISVLGFLLPLLVILVCYT 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  160 FILSTILRISSAEGRN-------KAFSTCGAHLTVVIL----YYGAALSMYLKPSSSSSQEVDKIISL--LYGVLTPMLN 226
Cdd:pfam00001 173 LIIRTLRKSASKQKSSertqrrrKALKTLAVVVVVFILcwlpYHIVNLLDSLALDCELSRLLDKALSVtlWLAYVNSCLN 252

                  ....
gi 608624849  227 PIIY 230
Cdd:pfam00001 253 PIIY 256
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
1-234 2.99e-26

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 102.54  E-value: 2.99e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd15955   36 YIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGILLAMALDRYVAICHPLRHSSILTPQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLETSL-ALRLP-LCGNLIDHFTCEILAVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISY 158
Cdd:cd15955  116 VLLGIGVLVVVRAVVLIIPCPLLiKLRLHhFRSTVISHSYCEHMAVVKLAADDVRVNKIYGLFVAFSILGFDIIFITTSY 195
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 608624849 159 IFILSTILRISSAEGRNKAFSTCGAHLTVVILYYGAALSMYL--KPSSSSSQEVDKIISLLYGVLTPMLNPIIYSFRN 234
Cdd:cd15955  196 ALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFahRFGHHVAPYVHILLSNLYLLVPPVLNPIVYGVKT 273
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
1-234 2.41e-12

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 64.62  E-value: 2.41e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd00637   34 NYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRR 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALletslalrLPLCGNLIDHFTCEIlaVLKLACASSLLMDVTLLVVSVLLLPIPMLFICISYIF 160
Cdd:cd00637  114 RAKLLIALIWLLSLLLAL--------PPLLGWGVYDYGGYC--CCCLCWPDLTLSKAYTIFLFVLLFLLPLLVIIVCYVR 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849 161 ILSTILRISSAEGRNKAFSTCGAH-----------LTVVIL-------YYGAALSMYLKPSSSSSQEVDKIISLLYGVLT 222
Cdd:cd00637  184 IFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktlLIVVVVfllcwlpYFILLLLDVFGPDPSPLPRILYFLALLLAYLN 263
                        250
                 ....*....|..
gi 608624849 223 PMLNPIIYSFRN 234
Cdd:cd00637  264 SAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
1-234 1.19e-07

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 51.02  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd14967   35 NYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASILNLCAISLDRYLAITRPLRYRQLMTKK 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  81 VCVQMATVSWMTGCLTALLetSLALRLPLCGNLIDHFTCEILAVLKLACASSLLmdvtllvvsvlLLPIPMLFICISYIF 160
Cdd:cd14967  115 RALIMIAAVWVYSLLISLP--PLVGWRDETQPSVVDCECEFTPNKIYVLVSSVI-----------SFFIPLLIMIVLYAR 181
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 608624849 161 ILSTILRissaegRNKAFSTCGAHLTVVIL----YYGAALSMYLKPSSSSSQEVDKIISLLyGVLTPMLNPIIYSFRN 234
Cdd:cd14967  182 IFRVARR------ELKAAKTLAIIVGAFLLcwlpFFIIYLVSAFCPPDCVPPILYAVFFWL-GYLNSALNPIIYALFN 252
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
38-90 4.73e-05

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 43.31  E-value: 4.73e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 608624849  38 CALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQVCVQMATVSW 90
Cdd:cd15055   73 CKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCW 125
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
1-99 3.44e-04

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 40.74  E-value: 3.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   1 YFFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVmAYDRYVAICNPLRYPVIMNRQ 80
Cdd:cd14972   34 YILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLLASAYSLLAI-AVDRYISIVHGLTYVNNVTNK 112
                         90
                 ....*....|....*....
gi 608624849  81 VCVQMATVSWMTGCLTALL 99
Cdd:cd14972  113 RVKVLIALVWVWSVLLALL 131
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
2-99 3.61e-04

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 40.65  E-value: 3.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   2 FFLGNLSFMDICYTSASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQV 81
Cdd:cd14969   37 LFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRA 116
                         90
                 ....*....|....*...
gi 608624849  82 CVqMATVSWMTGCLTALL 99
Cdd:cd14969  117 LI-LIAFIWLYGLFWALP 133
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
38-91 7.40e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 39.74  E-value: 7.40e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 608624849  38 CALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQVCVQMATVSWM 91
Cdd:cd15317   73 CKFHTGLDLLLCTTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWL 126
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
55-99 1.39e-03

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 38.78  E-value: 1.39e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 608624849  55 LLAVmAYDRYVAICNPLRYPVIMNRQVCVQMATVSWMTGCLTALL 99
Cdd:cd14968   89 LLAI-AIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLT 132
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
56-99 3.82e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 37.74  E-value: 3.82e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 608624849  56 LAVMAYDRYVAICNPLRYPVIMNRQVCVQMATVSWMTGCLTALL 99
Cdd:cd15066   90 LCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFL 133
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
6-234 4.89e-03

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 37.45  E-value: 4.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849   6 NLSFMDICYTsASIPTLLVNLLSSQKTIVFSGCALQMYLSLAMGSTECVLLAVMAYDRYVAICNPLRYPVIMNRQVCVQM 85
Cdd:cd15094   41 NLAVADECFL-IGLPFLIVTMILKYWPFGAAMCKIYMVLTSINQFTSSFTLTVMSADRYLAVCHPIRSMRYRTPFIAKVV 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849  86 ATVSWMTGCLTALLETSLALRLPLCGNlidhFTCEILAVLKLACASsllMDVTLLVVSVLLLPIPMLFICISYIFIlstI 165
Cdd:cd15094  120 CATTWSISFLVMLPIILYASTVPDSGR----YSCTIVWPDSSAVNG---QKAFTLYTFLLGFAIPLLLISVFYTLV---I 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 608624849 166 LRISSAEGRNKAFSTCGAH-------LTVVILY-------YGAALSMYLKPSSSSSQEVDKIISLLYGVLT---PMLNPI 228
Cdd:cd15094  190 LRLRTVGPKNKSKEKRRSHrkvtrlvLTVISVYiicwlpyWAFQVHLIFLPPGTDMPKWEILMFLLLTVLSyanSMVNPL 269

                 ....*.
gi 608624849 229 IYSFRN 234
Cdd:cd15094  270 LYAFLS 275
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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