|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.08e-180 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 502.43 E-value: 3.08e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 58618544 321 ISPLIPILVTASITLLPLSPTIASIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.40e-142 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 407.27 E-value: 1.40e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSlNPYPLIIMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQW--HTN 318
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWrlPST 319
|
330 340
....*....|....*....|....*...
gi 58618544 319 KPISPLiPILVTASITLLPLSPTIASIV 346
Cdd:MTH00135 320 QLTLPL-AISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.93e-142 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 405.84 E-value: 4.93e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 58618544 321 ISPLIPILVTASITLLPLSPTIASI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
2.47e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 360.70 E-value: 2.47e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPhTTNHMK-QWH-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfEN 319
|
330 340
....*....|....*....|....
gi 58618544 319 KPISPLIPILVTASITLLPLSPTI 342
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPML 343
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.17e-104 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 308.82 E-value: 6.17e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*
gi 58618544 321 ISPLIPILVTASITLLPLSPTIASI 345
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-328 |
7.86e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 272.96 E-value: 7.86e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
....*...
gi 58618544 321 ISPLIPIL 328
Cdd:MTH00041 321 ITVYGVIL 328
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.25e-65 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 210.45 E-value: 1.25e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 1 MNPQAKLICAISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 81 NGqwditqLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNpypLIIMAIL 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNF---IIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCAtITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 58618544 321 ISpLIPILVTASITLLPLSPTIASI 345
Cdd:MTH00160 312 SL-ILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-302 |
1.03e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 174.30 E-value: 1.03e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 13 LLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITqltcp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 93 iscLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNP-YPLIIMAILSAALGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 172 QTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLnSMKALKLSTLMTSWVKTPALSATLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL-WSGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 58618544 252 AGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-337 |
1.98e-51 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 173.43 E-value: 1.98e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 12 SLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSmtnawhNGQWDITQLTC 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 92 PISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLT-LFFMTSQSLNPYpLIIMAILSAALGGWMGL 170
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSiLFFFTSHNILPM-MTSMAAMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 171 NQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPALSATLMLTLLS 250
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 251 LAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYcATITLPPHTTNHMkqwHTNKPISPLIPI-LV 329
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSLK---SAPYEPKTKILIsMC 322
|
....*...
gi 58618544 330 TASITLLP 337
Cdd:MTH00011 323 TLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-298 |
2.28e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.13 E-value: 2.28e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 11 ISLLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 91 CPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLtlFFMTSQSLNPYPLIIMAILSAALGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPL--LILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 171 NQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPALSATLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 58618544 251 LAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAY 298
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
4.13e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 141.41 E-value: 4.13e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 14 LLGSAITISSNHWVMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALMLF--------------SSMTNA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 79 WHNGQWDITQLTcpISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMK----FPPLTLFFMTSQSLNPY-- 152
Cdd:COG1007 192 LAAGGANSPLLL--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAADwq 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 153 -PLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLAL--LNFYL--YTLMTAAVFLTLNSM-KALK 226
Cdd:COG1007 270 lLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLsRKGG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 58618544 227 LSTLMTSW----VKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAY 298
Cdd:COG1007 350 EAEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
4.03e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 125.32 E-value: 4.03e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 14 LLGSAITISSNHWVMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALML--------------FSSMTNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 79 WHNGQWDITQLTcpISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMK---FPPLT-LFFMTSQSLNP--- 151
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEdwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 152 YPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLAL--LNFYL--YTLMTAAVFLTLNSM-KALK 226
Cdd:PRK05777 271 QVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLrRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 58618544 227 LSTLMTSW---VKT-PALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRL 296
Cdd:PRK05777 351 EAESISDFaglSKRsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
7.04e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.75 E-value: 7.04e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 13 LLLGSAITISSNHWVMAWTGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASALMLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 79 WHNGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFmtSQSLNPYPLIIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 159 ILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVIL----IYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSW 234
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 58618544 235 V--KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
6.67e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 112.79 E-value: 6.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 23 SNHWVMAWTGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 91 CPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLL-STAMKFPPL-----TLFFMTSQSLNPYPLIIMAILSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 165 GGWMGLNQTQTRKILAFSSISHLGWMTVIL----IYSPKLALLNFYLYTLMTAAVFLTLNS----MKALKLSTLMTS-WV 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrRVHTRNIRDYGGlAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 58618544 236 KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.59e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.89 E-value: 3.59e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 14 LLGSAITISSNHWVMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALMLFSSM--------------TNA 78
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISliygftgslnfedlLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 79 WHNGQWDITQLTcpISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMK---FPPLTLFFMTSQSLNPYPLI 155
Cdd:TIGR01770 192 LSNGMLNISLLL--LGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFGFSEAWQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 156 IM----AILSAALGGWMGLNQTQTRKILAFSSISHLGW--MTVILIYSPKLALLNFYL--YTLMTAAVFLTLNSMKALKL 227
Cdd:TIGR01770 270 IFlaiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKD 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 58618544 228 S-----TLMTSWVKT-PALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLA 297
Cdd:TIGR01770 350 EwieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.49e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 106.64 E-value: 1.49e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 13 LLLGSAITISSNHWVMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 88 QLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAmkfPPLTLFFMTSQ-SLNPYPLIIMAILSAALGG 166
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV---PKIGVFSILVQiGPVTNVVLICAVLSIIYGA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 167 WMGLNQTQTRKILAFSSISHLGW----MTVILIYSPKLALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTSWV--KTPAL 240
Cdd:MTH00199 263 IGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKGLIVEVSGLsrKNPVI 342
|
250 260
....*....|....*....|....*..
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
6.44e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.98 E-value: 6.44e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 13 LLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQLTCP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 93 IS----------CLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFppLTLFFMTSQSLNP-Y 152
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtkvgvyailRV--LTLLFGADPALFLgT 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 153 PLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMtviliyspkLALLNFYLYTLMTAAVFLTLNSM--KAL----- 225
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI---------LLGLGLGTPLGLAGALFHLLNHAlaKALlflaa 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 226 ----------KLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLR 295
Cdd:COG0651 345 gaieratgtrDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVR 424
|
.
gi 58618544 296 L 296
Cdd:COG0651 425 I 425
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-346 |
8.87e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 81.20 E-value: 8.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 51 RAIEAATKYFLVQAAASALML---------------FSSMTNAWHNGQWDITqLTCPISCLILTAAIAMKLGLVPFHFWF 115
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygfswlyglsggeieLQEIVNGLINTQMYNS-PGISIALIFITVGIGFKLSLAPFHQWT 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 116 PEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPY-------PLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:CHL00049 238 PDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 189 WMTVILI-------YSPKLALLNFYLytlmtaavFLTLNSMKALKLSTLMT----------SWVKTPALSATLMLTLLSL 251
Cdd:CHL00049 318 YVIIGIIvgdsndgYASMITYMLFYI--------FMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 252 AGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPHTTNHMKqwhtNKPISPLIPIlvtA 331
Cdd:CHL00049 390 GGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVR----NYRRSPLRSN---N 462
|
330
....*....|....*
gi 58618544 332 SITLLPLSPTIASIV 346
Cdd:CHL00049 463 SIELSMIVCVIASTI 477
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-302 |
3.74e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 79.52 E-value: 3.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 15 LGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAI---------EAATKYFLVQAAASALMLFSSMTNAWHNGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 84 ------------WDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLffMTSQSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYIL--LTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 152 YPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLY-------TLMTAAVFLTL----- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYavtylvsALASFTVICTLeefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 220 -------------NSMKALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330 340
....*....|....*....|...
gi 58618544 287 LLGL-------FFYLRLAycATI 302
Cdd:MTH00198 517 LFAIictcisaFYYIRIV--ATI 537
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.01e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 73.93 E-value: 2.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 50 PRAIEAATKYFLVQAAASALMLF-SSMTNAWHNGQwdiTQLT-------------CPISCLILTAAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSaialalitspslgLALALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 116 PEVLQGCSLTTGLLLST-------AMKFPPLTLFFMTSQSLNPYPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVgskaagfALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 189 WMTVILIYSPKLALLNFYLYtlMTAAVFLTLNSMKALKLSTLMTS----------WVKTPALSATLMLTLLSLAGLPPLT 258
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFY--LLAYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 58618544 259 GFLPK 263
Cdd:PRK02504 392 GFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-344 |
1.00e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.97 E-value: 1.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 33 LEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALMLFS-----------SMTNAWHNGQWDITQLTcPISCLILTA 100
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygtlNMAYLAVKMSENPTVVA-KIALALFIA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 101 AIAMKLGLVPFHFWFPEVLQGC--SLTTGLLLSTAMKFPPL--TLFFMTSQSLNP----YPLIIMAILSAALGGWMGLNQ 172
Cdd:PRK08376 229 GLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALarVLFSIYGPAINLatvgWVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 173 TQTRKILAFSSISHLGWMTV---ILIYSPKLALLNFYLYTLMTAAVFLTLNS--MKAL------------------KLST 229
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLglgVGLAALGDPAMASYGEIALAGGIYHIVNHalYKALlfltagaviyetgtrnlnELGG 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 230 LMTSWVKTpalSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMaLLSLLGLFFYLRLAYCATITLPPHTT 309
Cdd:PRK08376 389 LARTMPKT---TIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAM-IGSVLTLASFVKVFHTAFFGPPSEKV 464
|
330 340 350
....*....|....*....|....*....|....*.
gi 58618544 310 NHMKQwhtnKPISPLIPILV-TASITLLPLSPTIAS 344
Cdd:PRK08376 465 MNVKE----PPKPMLVPMLIlAIAIIGMGLFPWQIS 496
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
1.86e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.80 E-value: 1.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 49 HPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQW-----DITQLTCPIS-----CLILTAAIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 119 LQGCSLTTGLLLSTAM---------KFPpLTLFFMTSQSLNPYpLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAPL-LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 190 MTV-ILIYSP---KLALLNFYLYTLMTAAVFLTLNSMKAlKLSTLMTS-----WVKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:COG1008 314 VLLgIFALNPlglQGAVLQMVSHGLITAALFLLVGVLYD-RTHTRDIAdlgglAKRMPVLAALFLLAALASLGLPGTSGF 392
|
250 260 270
....*....|....*....|....*....|..
gi 58618544 261 LPKWLIIQELTKqemapTATAMALLSLLGLFF 292
Cdd:COG1008 393 VGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
3.94e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.83 E-value: 3.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFS-----SMTnawhnGQWDITQLT--CPISCLILTA----- 100
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllyGVT-----GTLNMADLAgaLAENPTVVTAfgfvl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 101 -AIAMKLGLVPFHFWFPEVLQGCSLTTGLLLS-TAMKFPP-------LTLF---FMTSQSLNPyPLIIMAILSAALGGWM 168
Cdd:PRK08375 210 lALALKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVyaliriyFTVFggdFRFALGLGW-LLAVLALLSMLVGSLA 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 169 GLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLN--FYL--YTLMTAAVFLTLNSM----KALKLSTLMTSWVKTPAL 240
Cdd:PRK08375 289 ALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLT 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAYCATITLPPhttNHMKQWHTNKP 320
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPP---PGSEAPKQEAP 445
|
330
....*....|....*.
gi 58618544 321 ISPLIPILVTASITLL 336
Cdd:PRK08375 446 LGMLAPSLALALLSLL 461
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-294 |
1.41e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.40 E-value: 1.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 34 EINTLAVLPLISKSHHpRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQL-----------TCPISCLILTAAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqglindtstgFALIVFLFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 103 AMKLGLVPFHFWFPE-----------VLQGCSLTTG---LLLSTAMkFPPLTLF-----FMTSQSLNpYPLIIMAILSAA 163
Cdd:PRK08668 207 VAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-LPGTKLFsefgtYRGVPLFN-YILAWLGNISII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 164 LGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKL----ALLNFYLYTLMTAAVFLTLNSM----KALKLSTLMTSWV 235
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLIE 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 58618544 236 KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTAtAMALLSLLGLFFYL 294
Cdd:PRK08668 365 KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA-FMAFFGSIGSFLYV 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
3.27e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.19 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 50 PRAIEAATKYFLVQAAASALMLFSSMTNAW-HNGQWDITQL-TCPISC-------LILTAAIAMKLGLVPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELlNLPLPFgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 119 ---LQGCSLTTGLLLSTA----MKFpPLTLFFMTSQSLNPYpLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMT 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMGtygfLRF-NLPLFPDASLYFAPV-LAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 192 V-ILIYSP---KLALLNFYLYTLMTAAVFLTL----NSMKALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LgIFSFNElgiSGAVFQMISHGLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
....*
gi 58618544 264 WLIIQ 268
Cdd:TIGR01972 390 FLILL 394
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-298 |
1.16e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.48 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 23 SNHWVMAWTGLEINTLAVLPLISKSHH-PRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQL------------ 89
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 90 TCPISCLILTAAIAmKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFPPLtlFFMTSQSLnpYPLIIMAIL 160
Cdd:COG1009 210 LTLILLLLLLGAFG-KSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPL--FALSPVWL--TVVAIIGAI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFylytLMTAAVFltlnsmKAL--------------- 225
Cdd:COG1009 285 TALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFH----LLTHAFF------KALlflgagsvihatgtr 354
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 58618544 226 ---KLSTLmtsWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMAPTATAMALL-SLLGLFFYLRLAY 298
Cdd:COG1009 355 dirKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
2.54e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.78 E-value: 2.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 96 LILTAAIAmKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFPPLtlfFMTSQSLNPYpLIIMAILSAALGG 166
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPT-VLVLGLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 167 WMGLNQTQTRKILAFSSISHLGWMTVIL-IYSPKLALLNFYL---YTLMTAAVFLTLNSMKAL-------KLSTLmtsWV 235
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMllaHALFKAALFLVVGIIDHStgtrdirKLSGL---GR 359
|
170 180
....*....|....*....|....*...
gi 58618544 236 KTPALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 360 RQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
3.75e-09 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 51.87 E-value: 3.75e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 58618544 291 FFYLRLAYCATITLPPHTTNHMKQWHTNKP-ISPLIPILVTASITLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTkNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-292 |
6.24e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 57.25 E-value: 6.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 20 TISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYF---------------LVQAAASALMLFSSMTNAW----- 79
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEMAILWtellk 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 80 HNGQWDITQLTcpISCLILTAAIAMKLGLVPFHFWFPEV-LQGCS----LTTGLLLSTAMkFPPLTLFFMTSQSLNPYP- 153
Cdd:PRK06458 204 HASLLDPTLMK--LAFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSpvsaLLSGVLLNVAL-YAVLRYYILIDAAIGSDFp 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 154 ---LIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLM----TAAVFLTLNSMkALK 226
Cdd:PRK06458 281 grlLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFASGNV-LQK 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 58618544 227 LSTLMTSWVK-----TPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQemAPTATAMALLSLLGLFF 292
Cdd:PRK06458 360 YGTRDINVIRgllkvSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLAR--GPLLIAILLLLLLTLAF 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
80-304 |
2.50e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 55.43 E-value: 2.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 80 HNGQW-DITQLTCPISCLILTAAIAmKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFPPLTLFFMTSQSL 149
Cdd:PRK12650 196 HSDVWaEKPGLTTVVAVLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVvkagiylllRFSPVFHDVAVWNWL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 150 npypLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWM-TVILIYSP---KLALLNFYLYTLMTAAVFLTLNSMK-- 223
Cdd:PRK12650 275 ----LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhq 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 224 --ALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMaPTATAMALLSLLGLFFYLRLAYCAT 301
Cdd:PRK12650 351 agTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSAR 429
|
...
gi 58618544 302 ITL 304
Cdd:PRK12650 430 LVL 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
3.29e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.96 E-value: 3.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQLTC--PISCLILTAAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 111 FHFWFPEVLQGCSLTTGLLLSTA-MKFPPLTLFFMTSQSLNPYPLI-IMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVvVKAGVFPLVRCALDVPGLDLIVrIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 189 WmtviLIYSPKLAllnfYLYTLMTAAVFLTLNSMKALKLSTLMTSWVKTPALSAT-LMLTL--LSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 F----ILAAPLVG----GLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKwIPLTMasFSIAGFPLLAGFVSKVL 354
|
....*.
gi 58618544 266 IIQELT 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
5.74e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.05 E-value: 5.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 50 PRAIEAATKYFLVQAAASALMLFSSMTNAWHN----GQWDITQL-TCPISC-------LILTAAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatGTFDIADLlNLPLPPgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 118 VLQ-----GCSLTTGLLLSTA----MKFPpLTLFFMTSQSLNPYpLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAPI-IITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 189 WMTvILIYSPKL-----ALLNFYLYTLMTAAVFLTLNSMKALKLSTLMTS----WVKTPALSATLMLTLLSLAGLPPLTG 259
Cdd:PRK05846 315 FVT-LGIFAGNQlgiqgAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
....*...
gi 58618544 260 FLPKWLII 267
Cdd:PRK05846 394 FVGEFLIL 401
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
1.19e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.03 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 103 AMKLGLVPFHFWFPE----------VLQGCSLTTGLLLSTAMKFpplTLFFMTSQSLNPYPLIIMAILSAALGGWMGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 173 TQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYT----LMTAAVFLTLNSMKAL-------KLSTLMTSWvktPALS 241
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLG 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 58618544 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRL 296
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
4.46e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 51.13 E-value: 4.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAAS------ALMLFSSMTNAWHNGQWDITQLTCPISCLILTAAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 107 GLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYP------LIIMAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhvigyvGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 181 FSSISHLGWMTVIL---IYSPKLALLN--FYLYT---------LMTAAVFLTLNSMKALKLSTLMTswvKTPALSATLML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEGsiAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVLK---KLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 58618544 247 TLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
90-316 |
1.74e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.69 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 90 TCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAI-----LSAAL 164
Cdd:MTH00020 208 DITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFF 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 165 GGWMGLNQTQTRKILAFSSISHLGWMTVIL-IYSPKLALLNFYLYTLMTAAVFLTLNS-MKALKLSTLMTswvKTPALSA 242
Cdd:MTH00020 288 AATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSvIHALSDEQDMR---KMGGLIS 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 243 TLMLTL-------LSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLS-LLGLFFYLRLAYCATITLPPHTTNHMKQ 314
Cdd:MTH00020 365 FLPLTYiffligsLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFH 444
|
..
gi 58618544 315 WH 316
Cdd:MTH00020 445 LH 446
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
8.36e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 8.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 92 PISCLILTAAI--AMKLGLvpfHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYPLIIMAI-----LSAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 165 GGWMGLNQTQTRKILAFSSISHLGWMTVILIY--SPKLALLNFYLYTLMTAAVFL---------TLNSMKALKLSTLMTS 233
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|....*
gi 58618544 234 wvkTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 383 ---IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.49e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.86 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 55 AATKYFLVQAAASALMLFSSMTNAWHNGQWD------ITQLTCPISCLILTAAI----AMKLGLVPFHFWFPEVLQGCSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 125 TTGLLLSTAM---------KFPpLTLFFMTSQSLNPYPLIIMAIlSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILI 195
Cdd:PRK07363 238 AVAILLGGVLaklgtygllRFG-LQLFPQTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 196 YSPKLALL----NFYLYTLMTAAVFLTLNSMKAL-------KLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07363 316 AGTQLSLLgavaQMISHGLILALLFHLVGIVERKvgtrdldVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEF 395
|
....
gi 58618544 265 LIIQ 268
Cdd:PRK07363 396 IVFQ 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
92-289 |
2.90e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 92 PISCLILTAAIAmKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFPPL---TLFFMTSqslnpypLIIMAI 159
Cdd:PRK12647 196 AILLLVLGGAFT-KSAQFPFHFWLPNAMEAPTPVSAYLHSATMvkagiyllaRLNPVlggTPLWQTI-------LPLFGG 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLY----TLMTAAVFLTLNSMK-------ALKLS 228
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgtrdITKLG 347
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 58618544 229 TLmtsWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTkqEMAPTATAMALLSLLG 289
Cdd:PRK12647 348 GL---RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-267 |
3.58e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 154 LIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLY----TLMTAAVFLTLNSMK----AL 225
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTT 361
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 58618544 226 KLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-288 |
7.83e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 44.36 E-value: 7.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 13 LLLGSAITISSNHWVMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAA------SALMLFSSMTNAWHNGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 87 TQLT----------CPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMK----FPPLTLFFMTSQS---- 148
Cdd:PRK08676 191 TELAahasllspsvLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLnigiYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 149 LNPYPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLNFYLYTLMTAAVFLTL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 58618544 221 SMKALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTkqEMAPTATAMALLSLL 288
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLG--GISVWLVLAVLLLLL 416
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
90-296 |
8.87e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.17 E-value: 8.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 90 TCPISCLILTAAIAMKLGLVPFhFWFPEVLQGCSLTTGLLLSTAMK-------FPPLTLFFMTSQSLNPYPLIIMAILSA 162
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTViliyspKLALLN--------FYLYTLMT--AAVFLTLNSMKAL----KLS 228
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVHDMVvkTALFLIAGSLVRLtgyrSLQ 357
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 58618544 229 TLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRL 296
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
1.45e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.48 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 34 EINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQWDITQ-----LTCPISCLILTAAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 109 V------PFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLNPYP--------LIIMAILSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLSyfpsaqgvLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 175 TRKILAFSSISHLGWMTVILIYSPKLAL-------LNFYLYTLMTAAVFLTLNSM-KALKLSTLMTSWVKTPALSATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKSALFLGAGIVSYRtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 58618544 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.52e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 55 AATKYFLVQAAASALMLFSSMTNAWHNG--QWDITQL---TCPISC-LILTAAI----AMKLGLVPFHFWFPEVLQGCS- 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAHVEASt 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 124 ----LTTGLLLSTA----MKFPpLTLFFMTSQSLNPYpLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILI 195
Cdd:PRK06473 238 pvsvLLAGVLLKLGtyglLRFG-VGLFPEAWVYLAPW-LATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 196 YSPKLALLNFYL----YTLMTAAVFLTL-------NSMKALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVFqmisHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
..
gi 58618544 265 LI 266
Cdd:PRK06473 396 LV 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
2.92e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.80 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 55 AATKYFLVQAAASALMLFSSMTNAWHNGQWDITQLTCP-----ISCLILTAAIAMKLGLVPFHFWFPEVLQGC-----SL 124
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASpsnvsAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 125 TTGLLLSTAM-KFPPLTLFFMTSQSLNPYPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLG--------WMTVILI 195
Cdd:PRK08667 243 MSGVMLKVAVyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 196 YSPKLALLNF--YLYTLMTAAVFLTLNSMKA---------LKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggALFHSLNHALFKSLLFLTAgsvvhatgtRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*.
gi 58618544 265 LIIQEL 270
Cdd:PRK08667 403 LLYESF 408
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
70-268 |
3.73e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.06 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 70 MLFSSMTNAWHNGQWDITQLT----CPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLL----LSTAMKFPPLTL 141
Cdd:MTH00207 153 MLLLSIGWTLNQGHWSITNMWqtdmNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVhsstLVTAGVFLLIRF 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 142 F-FMTSQSLNPYPLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVIL-IYSPKLALLNFYLYTLMTAAVFLTL 219
Cdd:MTH00207 233 YpFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMPKLALFHLITHALFKALLFVCA 312
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 58618544 220 NSM-----KALKLSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 313 GSLihshhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-284 |
4.79e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 41.73 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 11 ISLLLGSAITISSNHWVMaWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMT---NAWHNGQWDIT 87
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 88 QL----TCPISCLILTAAIAmKLGLVPFHFWFPEVLQG----CSLTTGLLLSTAMKFPPLTLFFMTSQSLNP-------Y 152
Cdd:PRK06589 203 GLfsknQSIILLLMFIYGIA-KTAIFPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYLqrifaefN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 153 PLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVI-LIYSPK---LALLNFYLYTLMTAAVFLTLNSMKALK-- 226
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSaFILTPKalgAAILHLVSHSFAKICLFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 227 --LSTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMAL 284
Cdd:PRK06589 362 dqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
5.61e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.45 E-value: 5.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 101 AIAMKLGLVPFHFWFPEV-----LQGCSLTTGLLLSTA------MKFPPLTLffmTSQSLNPyPLIIMAILSAALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglvrLSWPILPL---GAQNLAP-AVIAMGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 170 LNQTQTRKILAFSSISHLGWMTVILIYSPKLALLN----FYLYTLMTAAVFLTLNSMKALKLSTLMTSW----VKTPALS 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGsifiMLAHGIVSSLLFILVTILYDRHHTRLIKYYrglsITMPIWG 394
|
170 180
....*....|....*....|....*.
gi 58618544 242 ATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-272 |
8.07e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 41.28 E-value: 8.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 92 PISCLILTAAIAmKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLTLFFMTSQSLN-----PYPLIIMAILSAALGG 166
Cdd:PRK12646 211 PMIFMFLLGAFT-KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGlsnmyIYIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 167 WMGLNQTQTRKILAFSSISHLGWMTVI------LIYSPKLALLNFY-------LYTLMTAAVFLTLNSMKA--------- 224
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMvgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCALFMGVgiidheagt 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 58618544 225 ---LKLSTLMTSWvktPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 370 rdiRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
34-188 |
1.43e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.40 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 34 EINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALMLFSSMTNAWHNGQ--WDITQLT-----------CPISCLIlta 100
Cdd:PRK12561 117 ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksyplalellLYAGFLI--- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 101 AIAMKLGLVPFHFWFPE-----------VLQGCSLTTG----------LLLSTAMKFPPLtlffmtsqslnpypLIIMAI 159
Cdd:PRK12561 194 AFGVKLPIFPLHTWLPDahgeasapvsmILAGVLLKMGgyalirfnvqMLPDAHVYFAPA--------------LAILGV 259
|
170 180
....*....|....*....|....*....
gi 58618544 160 LSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12561 260 VNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-288 |
1.56e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 107 GLVPFHFWFPEVLQGCSLTTGLLLSTA-MKFPPLTLFFMTSQSLNP-----YPLIIMAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 181 FSSISHLG--------WMTVILIYSPKLALLNFY--LYTLMTAAVFLTLNSMKA---------LKLSTLMTSWVKTPALS 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVLFLGAgsvwfrtghRDIEKLGGIGKKMPVIS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 58618544 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSLL 288
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLL 401
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
2.13e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 15 LGSAITISSNHWVM---AWTGLEINTLAVLPLISKSHHPraieaATKYFLVQAAASALMLFSSMTNAWHNGQWDITQLTC 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRP-----AFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 92 PISCLILTAAIAMKLGLVPFHF--WFPEVLQGCSLTTGLLLSTAMKFPPL-----TLFFMTSQSLNPYPLIIMAI--LSA 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilkMTILTQTIPIGYFGLTILAIgaFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTV-----ILIYSPKLALLNFYLYTLMTAA---------VFLTLNSMKALKLS 228
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 58618544 229 TLMTSWVKTPALSATLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 318 YSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-267 |
2.88e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.55 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 68 ALMLFSSMTNAWHNGQWDITQLTCPISCLILTAAIAMKLGLVPFHFWFPEVLQGCSLTTGLLLSTAM---------KFPP 138
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMvvagvflliRLSP 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 139 LTLFFMTSQSLnpypLIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVIL-IYSPKLALLNFYLYTLMTAAVFL 217
Cdd:MTH00211 260 LFQNNQLILGA----VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLgLNQPQLAFLHICTHAFFKAMLFM 335
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 58618544 218 T-------------LNSMKALKLSTLMTswvktpalSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 336 CsgsiihglnneqdIRKMGGLSKNLPFT--------SSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-286 |
3.99e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 164 LGGWMGLNQTQTRKILAFSSISHLGWMTVILIYSPKLALLnfylytlmtAAVFLTLN--SMKAL---------------- 225
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIINhaTFKASlfmaagiidhetgtrd 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 58618544 226 --KLSTLmtsWVKTPaLSATL-MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPT--------ATAMALLS 286
Cdd:PRK12648 355 mrRLSGL---RRLMP-ITATLaMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldwllpvaATLAGAFS 422
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-272 |
4.30e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.31 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 104 MKLGLVPFHFWFPEVLQGCSLTTGLLLSTAMKFPPLtLFFMTSQSLNPYPLIIMAILSAALGGWMGLNqtqTRKILAFSS 183
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFL-LVLLQFFSKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 184 ISHLGWMTVILIYS-PKLALLNFYLYTLMTaavfltlnsmkalklsTLMTSWVKTPALSATLMLTLLSLAGLPPLTGFLP 262
Cdd:MTH00091 145 TESFNWLILSFFFSfFNVFFLFFYYFLLML----------------FLIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFV 208
|
170
....*....|
gi 58618544 263 KWLIIQELTK 272
Cdd:MTH00091 209 KIFSLSEILK 218
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
151-303 |
4.33e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 151 PYPLIIMAI---LSAALGGWMGLNQTQTRKILAFSSISHLGWMTVILiyspklALLNFY--LYTLMTAAVFLTLnsmkaL 225
Cdd:MTH00210 272 PLALTIVTIlgaLTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVC------GISNYStsLFHLMNHAFFKAL-----L 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 226 KLST--------------LMTSWVKTPALSATLMLT-LLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLS-LLG 289
Cdd:MTH00210 341 FLSAgsvihavsdeqdmrKMGGLIKSIPFTYVMILIgSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLT 420
|
170
....*....|....
gi 58618544 290 LFFYLRLAYCATIT 303
Cdd:MTH00210 421 AFYSIRLIYLTFIT 434
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
154-298 |
7.33e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.09 E-value: 7.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58618544 154 LIIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTVIL-IYSPKLALLNFYLYTLMTAAVFLTLNSM-------KAL 225
Cdd:MTH00209 242 LLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLgLNQPELAFFHLITHALFKALLFICAGNIihshghsQDI 321
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 58618544 226 KLSTLMtsWVKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPTATAMALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 322 RMVGNL--WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| |
