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Conserved domains on  [gi|585657826|ref|XP_006885580|]
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PREDICTED: olfactory receptor 51G2-like [Elephantulus edwardii]

Protein Classification

olfactory receptor family 51 protein( domain architecture ID 11607012)

olfactory receptor family 51 protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
29-303 0e+00

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320350  Cd Length: 275  Bit Score: 503.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15222    1 HWISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15222   81 HTFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15222  161 MKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15222  241 GKHASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
 
Name Accession Description Interval E-value
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
29-303 0e+00

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 503.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15222    1 HWISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15222   81 HTFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15222  161 MKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15222  241 GKHASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-312 6.40e-140

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 396.49  E-value: 6.40e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826   35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  195 DIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPH 274
Cdd:pfam13853 161 DIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 585657826  275 LVQVIMGFVYLLVPPLMNPIVYSVKTKQIRDRVTRAFC 312
Cdd:pfam13853 241 LLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
 
Name Accession Description Interval E-value
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
29-303 0e+00

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 503.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15222    1 HWISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15222   81 HTFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15222  161 MKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15222  241 GKHASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
29-303 4.36e-146

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 411.68  E-value: 4.36e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15917    1 IWLSIPFCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15917   81 HSFTAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15917  161 VKLACGDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15917  241 GHHVPPHVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
35-312 6.40e-140

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 396.49  E-value: 6.40e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826   35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  195 DIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPH 274
Cdd:pfam13853 161 DIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 585657826  275 LVQVIMGFVYLLVPPLMNPIVYSVKTKQIRDRVTRAFC 312
Cdd:pfam13853 241 LLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
29-303 2.48e-122

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 351.59  E-value: 2.48e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15221    1 VWISIPFCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15221   81 HFVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15221  161 ARLACADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15221  241 GRHIPRHVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
29-303 7.88e-122

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 350.41  E-value: 7.88e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15953    1 IWISIPFCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15953   81 HTLSIMESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15953  161 VKLACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15953  241 GQGIAPHIHIILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
29-303 4.32e-118

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 340.86  E-value: 4.32e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15951    1 VWISIPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15951   81 HSFSTMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15951  161 VKLACADTRVSRAYGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15951  241 GHNVPPHVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
28-304 2.14e-116

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 336.88  E-value: 2.14e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  28 HIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFF 107
Cdd:cd15948    1 HPWISIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 108 IHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQE 187
Cdd:cd15948   81 LHSFSIMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 188 VMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHR 267
Cdd:cd15948  161 VVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHR 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 585657826 268 FGKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15948  241 FARHVAPHVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
29-303 6.67e-113

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 327.83  E-value: 6.67e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15950    1 FWIAIPFCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15950   81 HSFTAVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15950  161 VKLACADPRPSSLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15950  241 GQGVPPHTQVLLADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
14-304 1.59e-110

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 322.50  E-value: 1.59e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  14 SAFLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGM 93
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  94 REIGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYC 173
Cdd:cd15949   82 NEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWY 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 174 GSSVLSHSYCLHQEVMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVL 253
Cdd:cd15949  162 RTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAIL 241
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 585657826 254 LFYTPMIGLSVIHRFGKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15949  242 AFYVPIAVSSLIHRFGQNVPPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-303 8.90e-110

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 319.71  E-value: 8.90e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15952    1 FWIGFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15952   81 HTFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIvSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15952  161 AKLACASIRINIIYGLFAI-SVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRF 239
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15952  240 GHNIPRYIHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
30-307 2.32e-99

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 293.43  E-value: 2.32e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIH 109
Cdd:cd15223    2 WLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 110 CLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVM 189
Cdd:cd15223   82 FFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFG 269
Cdd:cd15223  162 SLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRFG 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 585657826 270 KQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIRDRV 307
Cdd:cd15223  242 KTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
30-303 4.39e-94

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 280.12  E-value: 4.39e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIH 109
Cdd:cd15955    2 WIGIPFCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 110 CLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLK-RFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15955   82 TLQAFESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLIKlRLHHFRSTVISHSYCEHMAV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15955  162 VKLAADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRF 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15955  242 GHHVAPYVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
29-303 1.41e-91

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 273.66  E-value: 1.41e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15956    1 VWLSLPFCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15956   81 HAFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15956  161 VKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15956  241 GHSVPSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
29-303 6.01e-90

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 269.39  E-value: 6.01e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15954    1 IWISIPFCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15954   81 HTFTGMESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRF 268
Cdd:cd15954  161 VKLACANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 585657826 269 GKQ--APHlVQVIMGFVYLLVPPLMNPIVYSVKTKQI 303
Cdd:cd15954  241 GGHhiTPH-IHIIMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
29-299 3.74e-83

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 252.02  E-value: 3.74e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd13954    1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVihRF 268
Cdd:cd13954  161 LKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYV--RP 238
                        250       260       270
                 ....*....|....*....|....*....|.
gi 585657826 269 GKQAPHLVQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd13954  239 SSSYSSDLDKVVSVFYTVVTPMLNPIIYSLR 269
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
35-305 4.37e-53

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 174.95  E-value: 4.37e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:cd15225    7 FLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:cd15225   87 ECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 DIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTpMIGLSVIHRFGKQAPH 274
Cdd:cd15225  167 DTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYG-CASFTYLRPKSSYSPE 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 585657826 275 LVQVImGFVYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15225  246 TDKLL-SLFYTVVTPMLNPIIYSLRNKEVKG 275
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
37-304 1.15e-52

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 173.95  E-value: 1.15e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15235   10 AMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDS 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15235   90 FLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCSDT 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSV--IHRFGKQAPH 274
Cdd:cd15235  170 SLNELLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFqpSSSYSADKDR 249
                        250       260       270
                 ....*....|....*....|....*....|
gi 585657826 275 LVQVimgfVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15235  250 VATV----MYTVVTPMLNPFIYSLRNKDVK 275
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
37-304 2.91e-50

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 167.75  E-value: 2.91e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15234    9 SMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15234   89 FLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIG----LSVIHRFGKQ 271
Cdd:cd15234  169 LINNIL-IYLATVIFGGIPLSgIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGvyisSAVTHSSRKT 247
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 272 APHLVqvimgfVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15234  248 AVASV------MYTVVTPMLNPFIYSLRNKDMK 274
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
37-297 3.12e-50

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 167.45  E-value: 3.12e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15237    9 LIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15237   89 VLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACADT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHRFGKQAPHLV 276
Cdd:cd15237  169 SLNEAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAI-FMYMRPHSTHSPDQD 247
                        250       260
                 ....*....|....*....|.
gi 585657826 277 QVIMGFvYLLVPPLMNPIVYS 297
Cdd:cd15237  248 KMISVF-YTIVTPMLNPLIYS 267
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
35-311 5.58e-50

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 166.96  E-value: 5.58e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:cd15421    7 ILLIFLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS--LGRSVALIFPLPFMlkRFPYCGSSVLSHSYCLHQEVMKLA 192
Cdd:cd15421   87 ECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSwlGGSLNSLIHTVYTM--HFPYCGSREIHHFFCEVPALLKLS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 193 CADIkanSIYGMFVIVSTVG---VDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHRFG 269
Cdd:cd15421  165 CADT---SAYETVVYVSGVLfllIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAI-FTYMRPGS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 585657826 270 KQAPHLVQVIMGFvYLLVPPLMNPIVYSVKTKQirdrVTRAF 311
Cdd:cd15421  241 YHSPEQDKVVSVF-YTILTPMLNPLIYSLRNKE----VLGAL 277
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
37-297 6.00e-50

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 166.64  E-value: 6.00e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15918    9 GMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15918   89 FLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSvihrFGKQAPHLV 276
Cdd:cd15918  169 HLNELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVY----LSPPSSHSA 244
                        250       260
                 ....*....|....*....|...
gi 585657826 277 Q--VIMGFVYLLVPPLMNPIVYS 297
Cdd:cd15918  245 SkdSVAAVMYTVVTPMLNPFIYS 267
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
29-297 4.57e-49

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 164.58  E-value: 4.57e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15912    1 ILLFLLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15912   81 FFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIK----ANSIYGMFVIVSTVgvdsLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSV 264
Cdd:cd15912  161 LKLSCSDTRlielLDFILASVVLLGSL----LLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYV 236
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 265 ihRFGKQAPHLVQVIMGFVYLLVPPLMNPIVYS 297
Cdd:cd15912  237 --RPSQSSSLDLNKVVALLNTVVTPLLNPFIYT 267
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
29-299 1.86e-47

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 160.23  E-value: 1.86e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15914    1 LLLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANS----IYGMFVIVSTVgvdsLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSV 264
Cdd:cd15914  161 LSLACTDTSLNVlvdfVIHAVIILLTF----LLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYL 236
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 265 ihRFGKQAPHLVQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15914  237 --RLSKSYSLDYDRAIAVVYAVLTPFFNPIIYSLR 269
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
37-309 3.66e-47

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 159.79  E-value: 3.66e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15411    9 VIYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNT-----AIGRIGLASLGRSVALIFplpfmLKRFPYCGSSVLSHSYCLHQEVMKL 191
Cdd:cd15411   89 FLLGLMAYDRYVAICNPLLYTVVMSRRvclklAAGSYAAGFLNSLIHTTL-----ISRLSFCGSNVINHFFCDTPPLLKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 192 ACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHRFGKQ 271
Cdd:cd15411  164 SCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGI-FTYLRPSSSY 242
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 585657826 272 APHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15411  243 SLGQDKVASVF-YTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
37-299 4.39e-47

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 159.21  E-value: 4.39e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15230    9 LIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15230   89 FLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLSCSDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHRFGKQAPHL 275
Cdd:cd15230  169 HINELV-LFAFSGFIGLSTLLiILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLI-FMYLRPSSSYSLDQ 246
                        250       260
                 ....*....|....*....|....
gi 585657826 276 VQVIMGFvYLLVPPLMNPIVYSVK 299
Cdd:cd15230  247 DKVVSVF-YTVVIPMLNPLIYSLR 269
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
37-297 5.83e-47

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 159.16  E-value: 5.83e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15227    9 LIYLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASEL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGR-------IGLASLGRSVALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVM 189
Cdd:cd15227   89 ALLTVMAYDRYVAICHPLHYEVIMNRGACVQmaaaswlSGLLYGALHTANTFSLPF-------CGSNVIHQFFCDIPQLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPmiGLSVIHRFG 269
Cdd:cd15227  162 KLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLST--GSFAYLKPP 239
                        250       260
                 ....*....|....*....|....*...
gi 585657826 270 KQAPHLVQVIMGFVYLLVPPLMNPIVYS 297
Cdd:cd15227  240 SDSPSLLDLLLSVFYSVVPPTLNPIIYS 267
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
38-304 1.79e-45

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 155.56  E-value: 1.79e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15420   10 LYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIK 197
Cdd:cd15420   90 LLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACADTW 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAphLVQ 277
Cdd:cd15420  170 INEILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSA--EQE 247
                        250       260
                 ....*....|....*....|....*..
gi 585657826 278 VIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15420  248 KILSLFYSLFNPMLNPLIYSLRNKQVK 274
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
37-304 3.59e-45

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 154.73  E-value: 3.59e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15231    9 IIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNT----AIGRIGLASLGRSV---ALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVM 189
Cdd:cd15231   89 LLLAVMAYDRYVAICNPLHYAVIMSRKvclqLAAASWLCGFLNSAvhtVLTFRLSF-------CGSNQISHFFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIygMFVIVS-TVGVD-SLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHR 267
Cdd:cd15231  162 KLSCSDTSLNEV--LLLVASvFIGLTpFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAI-FNYNRP 238
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 585657826 268 FGKQAPHLVQVImGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15231  239 SSGYSLDKDTLI-SVLYSIVTPMLNPIIYSLRNKEVK 274
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
36-299 3.99e-45

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 154.28  E-value: 3.99e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLE 115
Cdd:cd15226    8 SLFYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 116 SSVLLSMAFDRFVAICRPLHYASILT-NTAIGRIGLASLGRSVALIFPLPFMLKrFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:cd15226   88 MVLLIAMAFDRYVAICKPLHYLTIMSpRMCILLVVASWIIGFIHSLSQLAFVVN-LPFCGPNVVDSFFCDLPLVIKLACT 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 DikansIYGM-FVIVSTVGVDSL----LILFSYALILRTVMSIASRAeRLKALNTCVSHICAVLLFYTPMIglsVIHRFG 269
Cdd:cd15226  167 D-----TYVLeLMVVANSGLISLvcflLLLISYIVILVTVRKHSSGG-SSKALSTCSAHITVVVLFFGPCI---FIYVWP 237
                        250       260       270
                 ....*....|....*....|....*....|
gi 585657826 270 KQAPHLVQVIMGFvYLLVPPLMNPIVYSVK 299
Cdd:cd15226  238 FSTFPVDKFLAVF-YTVITPLLNPIIYTLR 266
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
39-309 6.75e-45

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 153.95  E-value: 6.75e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15417   11 YLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS-LGRSVALIFPLPFMLKRFpYCGSSVLSHSYCLHQEVMKLACADIK 197
Cdd:cd15417   91 LAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAyLGGFLNSLIQTVSMFQLS-FCGPNVIDHFFCDIPPLLSLSCSDTF 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPmiGLSVIHRFGKQAPHLV 276
Cdd:cd15417  170 ISQVV-LFLVAVLFGVFSVLvVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGT--GLFVYLRPSSSHSQDQ 246
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 277 QVIMGFVYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15417  247 DKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
39-307 7.43e-45

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 153.74  E-value: 7.43e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15424   11 YLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAigRIGLASLGRSVALIFPLPFM--LKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15424   91 LGAMAYDRYLAICHPLLYAAAMGRWR--QLQLALSCWAIGFLLSVINVgcTLRHPFCGPNHINHFFCELPVVLKLACADT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANS--IYGMFVIVSTVGVDslLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPH 274
Cdd:cd15424  169 HITEaiVFGAGVLILLVPLS--VILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTPDR 246
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 275 LVQVimGFVYLLVPPLMNPIVYSVKTKQIRDRV 307
Cdd:cd15424  247 DKQI--AVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
16-304 7.63e-45

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 154.02  E-value: 7.63e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  16 FLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE 95
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  96 IGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNT-AIGRIGLASLGRSVALIFPLPFMLkRFPYCG 174
Cdd:cd15408   81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRvCVSLVAGSYLAGFLNSTVHTGFIL-RLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 175 SSVLSHSYCLHQEVMKLACADIKANSIYgMFVIVS-TVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVL 253
Cdd:cd15408  160 SNVINHFFCDGPPLLALSCSDTSLNEML-LFAFVGfNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLTAVT 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 585657826 254 LFYTPMIGLSViHRFGKQAPHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15408  239 LFYGSLAFMYL-RPSSRYSLDLDKVASVF-YTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
35-297 3.47e-44

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 151.61  E-value: 3.47e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:cd15431    7 LLIVYLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGIT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIgrIGLASLGRSVALIFPL-PFMLKRFPYCGSSVLSHSYCLHQEVMKLAC 193
Cdd:cd15431   87 ECLLLAVMAYDRFVAICNPLRYTLIMSWRVC--IQLAAGSWVSAFLLTViPVLTMPLHFCGPNVINHFFCEVQALLKLAC 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 194 ADIKANSIYgMFVI-VSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFgKQA 272
Cdd:cd15431  165 SDTSLNEIL-MFATsIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQS-KSS 242
                        250       260
                 ....*....|....*....|....*
gi 585657826 273 PHLVQVIMGFvYLLVPPLMNPIVYS 297
Cdd:cd15431  243 SDQDKIISVF-YGVVTPMLNPLIYS 266
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
37-299 5.40e-44

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 151.30  E-value: 5.40e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15915    9 LLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15915   89 MLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIA-SRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPHl 275
Cdd:cd15915  169 SLNLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVrSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDSLEQ- 247
                        250       260
                 ....*....|....*....|....
gi 585657826 276 vQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15915  248 -DRIVALLYTVVTPVLNPLIYTLR 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
39-305 7.10e-44

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 151.40  E-value: 7.10e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15412   11 YLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYM 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIgrIGLASL----GRSVALIFPLpfMLKRFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:cd15412   91 LAVMAYDRYMAICNPLLYSVKMSRRVC--ISLVTFpyiyGFLNGLIQTI--LTFRLSFCGSNVINHFYCADPPLIKLSCS 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 DIKaNSIYGMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVihrfgkQAP 273
Cdd:cd15412  167 DTY-VKETAMFIVAGFNLSSSLLiILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYL------RPP 239
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 585657826 274 HLVQV----IMGFVYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15412  240 SEESVeqskIVAVFYTFVSPMLNPLIYSLRNKDVKQ 275
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
37-299 7.76e-44

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 150.85  E-value: 7.76e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15947    9 IFYLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTA-IGRIGLASLGRSVALIFPLPFMLKrFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15947   89 VLLAVMAFDRYVAVCRPLHYTVIMHPRLcVQLAALSWLSGLANSLLQTTLTLQ-LPLCGHHTLDHFFCEVPALIKLACVD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIglSVIHRFGKQAPHL 275
Cdd:cd15947  168 TTFNELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAI--YMYLQPPSSYSQD 245
                        250       260
                 ....*....|....*....|....
gi 585657826 276 VQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15947  246 QGKFISLFYTVVTPTLNPLIYTLR 269
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
37-305 1.75e-43

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 150.15  E-value: 1.75e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15419    9 VIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEG 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS-LGRSVALIFPLPFMLkRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15419   89 FLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSyLCGCINSIIQTSFTF-SLSFCGSNEIDHFFCDVPPLLKLSCSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSI----YGMFVIVSTVGVdsllILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTpmiglSVIHRFGKQ 271
Cdd:cd15419  168 TFINELvmfvLCGLIIVSTILV----ILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYG-----TVFFMYAQP 238
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 585657826 272 A----PHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15419  239 GavssPEQSKVVSVF-YTLVIPMLNPLIYSLRNKDVKE 275
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
39-304 2.67e-43

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 149.67  E-value: 2.67e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15229   11 YLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS--LGRSVALIFPLPfmLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15229   91 LSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAwaLGFLYALINTLL--LLNLHFCGPNEINHFSCELPSLLPLSCSDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYgMFVIVSTVGVDS-LLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYtpMIGLSVIHRFGKQAPHL 275
Cdd:cd15229  169 FANKMV-LLTSSVIFGLGSfLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFY--GTGFFRYLRPNSASSSV 245
                        250       260
                 ....*....|....*....|....*....
gi 585657826 276 VQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15229  246 LDRVFSIQYSILTPMLNPIIYSLKNKEVK 274
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
38-305 3.18e-43

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 149.47  E-value: 3.18e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15429   10 MYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFI 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIK 197
Cdd:cd15429   90 LLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRLACVDTS 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHRFGKQAPHLVQ 277
Cdd:cd15429  170 LNEVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAI-FTYMRPRSGSSALQEK 248
                        250       260
                 ....*....|....*....|....*...
gi 585657826 278 VIMGFvYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15429  249 MISLF-YAVVTPMLNPLIYSLRNKEVKG 275
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
38-309 3.58e-43

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 149.44  E-value: 3.58e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15416   10 IYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTN-TAIGRIGLASLGRSV-ALIFPLPFMlkRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15416   90 LLAAMAYDRYVAICNPLLYSTIMSQkVCVLLVAASYLGGCLnALVFTTCVF--SLSFCGPNEINHFFCDFPPLLKLSCSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIH--RFGKQAP 273
Cdd:cd15416  168 IRLAKILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPnsSYSMDQN 247
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 585657826 274 HLVQVimgfVYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15416  248 KVVSV----FYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
39-297 1.56e-42

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 147.63  E-value: 1.56e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15911   11 YIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIKA 198
Cdd:cd15911   91 LAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCSDTSL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 199 NSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRfGKQAPHLVQV 278
Cdd:cd15911  171 VELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPS-TNTSRDLNKV 249
                        250
                 ....*....|....*....
gi 585657826 279 IMGFvYLLVPPLMNPIVYS 297
Cdd:cd15911  250 FSLF-YTVLTPLVNPLIYS 267
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
37-304 2.43e-42

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 147.24  E-value: 2.43e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15432    9 IFYILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15432   89 VLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIglSVIHRFGKQAPHLV 276
Cdd:cd15432  169 TANEAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAI--SMYLQPPSNSSHDR 246
                        250       260
                 ....*....|....*....|....*...
gi 585657826 277 QVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15432  247 GKMVALFYGIITPMLNPLIYTLRNKDVK 274
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
16-311 5.37e-42

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 146.65  E-value: 5.37e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  16 FLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE 95
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  96 IGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAigRIGLASLGRSVALIFPLPFM--LKRFPYC 173
Cdd:cd15410   81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKL--CVLLVAGSYLWGIVCSLIHTcgLLRLSFC 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 174 GSSVLSHSYCLHQEVMKLACADIKAN----SIYGMFVIVSTVgvdsLLILFSYALILRTVMSIASRAERLKALNTCVSHI 249
Cdd:cd15410  159 GSNVINHFFCDLPPLLSLSCSDTYLNelllFIFGSLNEASTL----LIILTSYVFIIVTILRIRSAEGRQKAFSTCASHL 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 585657826 250 CAVLLFYTPMIGLSVIHRfGKQAPHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIRDRVTRAF 311
Cdd:cd15410  235 TAITIFHGTILFMYCRPS-SSYSLDTDKVASVF-YTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
37-304 1.32e-41

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 145.26  E-value: 1.32e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15407    9 LIYLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVEN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNT-----AIGRIGLASLGRS--VALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVM 189
Cdd:cd15407   89 FLLASMAYDRHAAVCKPLHYTTTMTTKvcaclTIGCYVCGFLNASihTGNTFRLSF-------CKSNVINHFFCDIPPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYtpmiGLSVIHRFG 269
Cdd:cd15407  162 ALSCSDIHISEIVLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFY----GTVIFMYLQ 237
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 585657826 270 KQAPHLVQV--IMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15407  238 PSSSHSMDTdkMASVFYTMVIPMLNPLVYSLRNKEVK 274
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
16-311 1.61e-41

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 145.58  E-value: 1.61e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  16 FLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE 95
Cdd:cd15943    2 FILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  96 IGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGS 175
Cdd:cd15943   82 ISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCGS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 176 SVLSHSYCLHQEVMKLACADIKANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLL 254
Cdd:cd15943  162 NVINHFFCDVPPLLKLSCSDTHVNEIV-LFAFAIFLGIFTSLeILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVTI 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 585657826 255 FY--TPMIGLSVIHRFGKQAPHLVQVImgfvYLLVPPLMNPIVYSVKTKQIRDRVTRAF 311
Cdd:cd15943  241 FYgtTLFMYLRPSSSYSLDQDKVVSVF----YTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
39-296 3.24e-41

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 143.96  E-value: 3.24e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15224   11 YVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIKA 198
Cdd:cd15224   91 LAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDMSL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 199 NSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIglsvihrFGKQAPHLVQV 278
Cdd:cd15224  171 AELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATL-------FMYARPKAISS 243
                        250       260
                 ....*....|....*....|...
gi 585657826 279 -----IMGFVYLLVPPLMNPIVY 296
Cdd:cd15224  244 fdsnkLVSVLYTVVTPLLNPIIY 266
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
38-304 8.81e-41

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 143.37  E-value: 8.81e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15236   10 MYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIK 197
Cdd:cd15236   90 LLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCSSTS 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAphLVQ 277
Cdd:cd15236  170 LNELVIFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSS--DKD 247
                        250       260
                 ....*....|....*....|....*..
gi 585657826 278 VIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15236  248 IVASVMYTVVTPMLNPFIYSLRNRDIK 274
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
37-304 1.38e-40

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 142.57  E-value: 1.38e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15228    9 AFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTN--TAIGRIGLASLGRSVALIF-PLPFMLkrfPYCGSSVLSHSYCLHQEVMKLAC 193
Cdd:cd15228   89 LLYTVMAYDRYVAICHPLRYLLIMNRrvCALLAAGTWITSSFHATILtSLTFTL---PYCGSNVVDYFFCDIFPVLKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 194 ADIKANSIygmfVIVSTVGVDS----LLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIglsVIHRFG 269
Cdd:cd15228  166 ADTSIAET----VSFTNVGLVPltcfLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCA---LIYTQP 238
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 585657826 270 KQAPHLVQVIMGFVYlLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15228  239 TPSPVLVTPVQIFNN-VVTPMLNPLIYTLRNKEVK 272
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
38-305 2.71e-40

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 141.80  E-value: 2.71e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15942   10 VYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS-LGRSVALIFPLPFMLkRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15942   90 LYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTwLGGCLHSTFQTSLTF-RLPYGQKNEVDYIFCDIPAMLKLACADT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYgMFVIVSTVGVDS-LLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMiglsVIHRFGKQAPHL 275
Cdd:cd15942  169 AFNELV-TFIDIGLVAMTCfLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPL----TFIYLRPGSQDP 243
                        250       260       270
                 ....*....|....*....|....*....|
gi 585657826 276 VQVIMGFVYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15942  244 LDGVVAVFYTTVTPLLNPVIYTLRNKEMKD 273
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
37-297 3.95e-40

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 141.24  E-value: 3.95e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIhcLSFLES 116
Cdd:cd15232    9 FLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF--TWSLGS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLL--SMAFDRFVAICRPLHYASILTN-------TAIGRIGLASLGRSVALIFPLPFmlkrfpyCGSSVLSHSYCLHQE 187
Cdd:cd15232   87 ELLLltAMAYDRYVAICHPLHYSTIMRKevcvglaTGVWAIGMLNSAVHTGLMLRLSF-------CGPNIINHFFCEIPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 188 VMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIgLSVIHR 267
Cdd:cd15232  160 LLLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVI-YTYIRP 238
                        250       260       270
                 ....*....|....*....|....*....|
gi 585657826 268 FGKQAPHLVQVImGFVYLLVPPLMNPIVYS 297
Cdd:cd15232  239 SSSYSPEKDKVV-AVLYSVVTPTLNPLIYS 267
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
37-299 6.09e-40

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 140.81  E-value: 6.09e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15939    9 LIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGR-IGLASLGRSVALIFPLPFMLkRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15939   89 FLLTVMAYDRYVAICKPLHYTTIMNRRVCGLlVGVAWVGGFLHSTIQILLTL-QLPFCGPNVIDHFFCDLFPLLKLACTD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKansIYGMFVIVSTvGVDSLLI----LFSYALILRTVMSIASRAERlKALNTCVSHICAVLLFYTPMIGLSVihRFGKQ 271
Cdd:cd15939  168 TY---VIGLLVVANS-GLICLLSflilLISYIVILYSLRTHSSEGRR-KALSTCGSHITVVVLFFVPCIFIYM--RPVTT 240
                        250       260
                 ....*....|....*....|....*...
gi 585657826 272 APhlVQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15939  241 FP--IDKVVAVFYTIITPMLNPLIYTLR 266
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
29-311 1.52e-39

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 140.25  E-value: 1.52e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15414    1 IPLFLLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAigRIGLASLGRSVALIFPLPFMLKRF--PYCGSSVLSHSYCLHQ 186
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRV--CVQLVVGPYVVGLLNTTTHTTAAFflPFCGPNVINHFFCDIP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 187 EVMKLACADIKANSIYgMFVIVSTVGVDS-LLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVi 265
Cdd:cd15414  159 PLLSLSCADTQINKWV-LFIMAGALGVLSgLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYV- 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 585657826 266 hRFGKQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIRDRVTRAF 311
Cdd:cd15414  237 -RPSSSSSLDLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTI 281
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
38-309 2.51e-39

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 139.46  E-value: 2.51e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15409   10 IYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTN-------TAIGRIGLASLGRSVALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVMK 190
Cdd:cd15409   90 LLAAMAYDRYVAICNPLLYPVVMSNrlcvqliTASYIGGFLHSMIHVGLTFRLSF-------CGSNEINHFFCDIPPLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 191 LACADIKANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFG 269
Cdd:cd15409  163 ISCTDPSINELV-LFIFSGSIQVFTILtVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSL 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 585657826 270 KQAPHlvQVIMGFVYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15409  242 YALDQ--DMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
16-309 6.37e-39

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 138.72  E-value: 6.37e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  16 FLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE 95
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  96 IGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTN-------TAIGRIGLASLGRSVALIFPLPFmlk 168
Cdd:cd15945   81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRrvcylllVGAYLSGMATSLVHTTLTFRLSF--- 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 169 rfpyCGSSVLSHSYCLHQEVMKLACADIKANSIYgMFVIVSTVGVDSLLILF-SYALILRTVMSIASRAERLKALNTCVS 247
Cdd:cd15945  158 ----CGSNTINHFFCDIPPLLALSCSDTQINELL-LFALCGFIQTSTFLAIIiSYCYIIITVLKIRSAEGRFKAFSTCAS 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 585657826 248 HICAVLLFYTPMIgLSVIHRFGKQAPHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15945  233 HLTAVGLFYGTLL-FMYLRPSSSYSLDTDKMTSVF-YTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
34-299 6.40e-39

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 138.27  E-value: 6.40e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  34 PLCF-MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLS 112
Cdd:cd15430    5 VLCLiMYLVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 113 FLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLA 192
Cdd:cd15430   85 STECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 193 CADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQa 272
Cdd:cd15430  165 CVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNA- 243
                        250       260
                 ....*....|....*....|....*..
gi 585657826 273 pHLVQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15430  244 -QISDKLITLFYGVVTPMLNPIIYSLR 269
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
38-305 7.31e-39

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 138.65  E-value: 7.31e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15406   19 IYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECY 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRI--GLASLGRSVALIFPLPFMlkRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15406   99 MLTAMAYDRYVAICNPLLYNVTMSPRVCSLLvaGVYIMGLIGATVHTSCML--RLSFCGDNVINHYFCDILPLLKLSCSS 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQaphL 275
Cdd:cd15406  177 TYINELLLFIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSS---M 253
                        250       260       270
                 ....*....|....*....|....*....|.
gi 585657826 276 VQVIMGFV-YLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15406  254 TQEKVSSVfYTTVIPMLNPLIYSLRNKDVKN 284
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
31-305 9.35e-39

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 137.90  E-value: 9.35e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHC 110
Cdd:cd15434    3 LSVVVLIFYLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 111 LSFLESSVLLSMAFDRFVAICRPLHYASI----LTNTAIGRIGLASLGRSVALIfPLPFMLkrfPYCGSSVLSHSYCLHQ 186
Cdd:cd15434   83 LGGTECVLLAVMAYDRYAAVCQPLHYTVVmhprLCWKLVAMSWLIGFGNSLVLS-PLTLSL---PRCGHHRVDHFFCEMP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 187 EVMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTpmiglSVIH 266
Cdd:cd15434  159 ALIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYG-----TIIY 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 585657826 267 RFGKQAPHLVQVIMGFV---YLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15434  234 MYLQPKNSVSQDQGKFLtlfYTIVTPSLNPLIYTLRNKDVKG 275
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
16-305 3.30e-38

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 136.84  E-value: 3.30e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  16 FLLSGIPGLEHLHIWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE 95
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  96 IGHDACFAQLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGS 175
Cdd:cd15944   81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 176 SVLSHSYCLHQEVMKLACADIKANSIYgMFVIVSTVGVDSLLILF-SYALILRTVMSIASRAERLKALNTCVSHICAVLL 254
Cdd:cd15944  161 NIINHFFCDVPPLLALSCSDTHINEIL-LYVFCGFVEMSSLSIILiSYLFILVAILRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 585657826 255 FYTPMIglsvihrFGKQAPHLVQVI-----MGFVYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15944  240 FYGTVI-------FMYLRPTSVYSLdqdkwASVFYTVVIPMLNPLIYSLRNKDVKE 288
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
37-304 4.67e-38

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 136.08  E-value: 4.67e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15233    9 LAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAigRIGLASLGRSVALIFPL--PFMLKRFPYCGSSVLSHSYCLHQEVMKLACA 194
Cdd:cd15233   89 FLLTAMAYDRYLAICQPLTYSVRMSWRV--QTALVGISCACAFTNALthTVAMSTLKFCGPNVINHFFCDLPPLFQLSCS 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 DIKANSIYgMFVIVSTVGVDSL-LILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYtpMIGLSVIHRFGKQAP 273
Cdd:cd15233  167 STHLNELL-LFVFAFFMALAPCvLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFY--GTGVFSYMRLGSVYS 243
                        250       260       270
                 ....*....|....*....|....*....|.
gi 585657826 274 HLVQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15233  244 SDKDKVIGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
38-304 6.35e-38

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 135.65  E-value: 6.35e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVL-GIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15916   10 IYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLaGFLEPGGKVISFGGCVAQLYFFHFLGSTEC 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS-LGRSVALIFPLPFMLkRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15916   90 FLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTwVAGSLHSAIHTSLTF-RLPFCGPNRIDYFFCDIPPLLKLACAD 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIygmfVIVSTVGVDSL----LILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPmiGLSVIHRFGKQ 271
Cdd:cd15916  169 TTINEL----VIFASIGVVALgcfiLILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVP--CVFIYLRPGSK 242
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 272 APhLVQVIMGFvYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15916  243 EA-LDGVIAVF-YTVVTPLLNPLIYTLRNKEVK 273
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
38-299 8.50e-38

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 135.26  E-value: 8.50e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15940   10 LYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTA-IGRIGLASLGRSVAlIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADi 196
Cdd:cd15940   90 LLTIMAYDRYVAICNPLHYPTVMNHKVcLWLVAALWLGGTVH-SLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTD- 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 kaNSIYGMFvIVSTVGVDSL----LILFSYALILRTVMSIASRAeRLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQA 272
Cdd:cd15940  168 --TYLIDIL-IVSNSGLISLvcfvALLGSYIVILVSLRKRSTEG-RRKALSTCASHLTVVTLFFGPCIFIYTRPSTSFSE 243
                        250       260
                 ....*....|....*....|....*..
gi 585657826 273 PHLVQVImgfvYLLVPPLMNPIVYSVK 299
Cdd:cd15940  244 DKVVSVF----YTVVTPLLNPIIYTLR 266
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
37-299 2.23e-37

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 133.98  E-value: 2.23e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15913    9 VIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIgLASLGRSVALIFPLP-FMLKRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15913   89 FFLSVMAFDRYLAICRPLHYPTIMTGQLCGKL-VAFCWVCGFLWFLIPvVLISQLPFCGPNIIDHFLCDPGPLLALSCVP 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIY----GMFVIVSTVgvdsLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGkq 271
Cdd:cd15913  168 APGTELIcytlSSLIIFGTF----LFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSG-- 241
                        250       260
                 ....*....|....*....|....*...
gi 585657826 272 APHLVQVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15913  242 NSTGMQKIVTLFYSVVTPLLNPLIYSLR 269
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
37-299 7.15e-37

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 132.60  E-value: 7.15e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15946    9 LIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITEC 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15946   89 TLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLACADT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVihRFGKQAPHLV 276
Cdd:cd15946  169 SLNEMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYM--RPGSNYSPER 246
                        250       260
                 ....*....|....*....|...
gi 585657826 277 QVIMGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15946  247 DKKISLFYNVFTALLNPVIYSLR 269
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
38-309 7.21e-37

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 132.92  E-value: 7.21e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15415   10 IYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIK 197
Cdd:cd15415   90 LLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLSCSDTH 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYgMFVIVSTVGVDSLL-ILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPmIGLSVIHRFGKQAPHLV 276
Cdd:cd15415  170 INELL-LLTFSGVIAMSTLLtIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGS-VSFSYIQPSSQYSLEQE 247
                        250       260       270
                 ....*....|....*....|....*....|...
gi 585657826 277 QVIMGFvYLLVPPLMNPIVYSVKTKQIRDRVTR 309
Cdd:cd15415  248 KVSAVF-YTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
37-305 9.29e-37

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 132.83  E-value: 9.29e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15413    9 VIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISEL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15413   89 FLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCSDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYgMFVIVSTVGVDSLLI-LFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVihrfGKQAPHL 275
Cdd:cd15413  169 HEKELI-ILIFAGFNLISSLLIvLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYL----QPKSSHS 243
                        250       260       270
                 ....*....|....*....|....*....|..
gi 585657826 276 VQV--IMGFVYLLVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15413  244 LDTdkMASVFYTLVIPMLNPLIYSLRNKEVKD 275
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
29-304 5.70e-36

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 130.68  E-value: 5.70e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15428    1 ILLFILFLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLAS-LGRSVALIFPLPFMLkRFPYCGSSVLSHSYCLHQE 187
Cdd:cd15428   81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSwVGGLLVSAVDTAFTL-NLSFGGHNKINHFLCEMPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 188 VMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHR 267
Cdd:cd15428  160 LLKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPK 239
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 585657826 268 fGKQAPHLVQVIMGFvYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15428  240 -SSTSKEYDKMISVF-YIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
37-299 1.30e-35

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 129.38  E-value: 1.30e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15936    9 LVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILT-NTAIGRIGLASLG------RSVALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVM 189
Cdd:cd15936   89 FLLSVMAYDRYIAIHKPLHYLTIMNqGVCTGLVAGSWLGgfahsiVQVALLLQLPF-------CGPNVLDNFYCDVPQVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIygmfVIVSTVGVDSLLILF----SYALILRTVMSIASRAERlKALNTCVSHICAVLLFYTPMIgLSVI 265
Cdd:cd15936  162 KLACTDTFLLEL----LMVSNSGLVTLLIFFilliSYTVILVKIRTHVTEGKR-KALSTCASQITVVTLIFVPCI-YIYA 235
                        250       260       270
                 ....*....|....*....|....*....|....
gi 585657826 266 HRFGKQAPHLVQVImgfVYLLVPPLMNPIVYSVK 299
Cdd:cd15936  236 RPFQTFPMDKAVSV---LYTVITPMLNPMIYTLR 266
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
33-304 2.71e-35

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 128.69  E-value: 2.71e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  33 IPLCF----MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15405    1 IPLFFlflgIYVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEV 188
Cdd:cd15405   81 CFFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFY--------TPMI 260
Cdd:cd15405  161 LQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFgsgafmylKPSS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 585657826 261 GLSVIHRfgkqaphlvqVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15405  241 VGSVNQG----------KVSSVFYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
37-310 4.40e-35

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 128.36  E-value: 4.40e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15418   10 LSYILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSEC 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15418   90 FLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDT 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRfGKQAPHLV 276
Cdd:cd15418  170 RVYELILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPS-SSHTPDRD 248
                        250       260       270
                 ....*....|....*....|....*....|....
gi 585657826 277 QVIMGFvYLLVPPLMNPIVYSVKTKQIRDRVTRA 310
Cdd:cd15418  249 KVVALF-YTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
37-299 1.28e-34

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 126.80  E-value: 1.28e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHE-PMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLE 115
Cdd:cd15935    9 ACYAAILLGNLLIVVTVHADPHLLQsPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSE 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 116 SSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACAD 195
Cdd:cd15935   89 MLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKLACMD 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIygmfVIVSTVGVDSL----LILFSYALILRTVMSiASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQ 271
Cdd:cd15935  169 TYVVEV----LMVANSGLLSLvcflVLLVSYGIILTTLRG-RFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSS 243
                        250       260
                 ....*....|....*....|....*...
gi 585657826 272 APHLVQVImgfvYLLVPPLMNPIVYSVK 299
Cdd:cd15935  244 VDKVASVF----YTLITPALNPLIYTLR 267
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
39-304 2.61e-34

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 126.06  E-value: 2.61e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  39 YLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSV 118
Cdd:cd15433   11 YLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADIKA 198
Cdd:cd15433   91 LAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDET 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 199 NSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMI--GLSVIHRFGKQAPHLV 276
Cdd:cd15433  171 TEVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIytYLQPIHRYSQAHGKFV 250
                        250       260
                 ....*....|....*....|....*...
gi 585657826 277 QVImgfvYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15433  251 SLF----YTVMTPALNPLIYTLRNKDVK 274
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
37-299 1.18e-33

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 124.08  E-value: 1.18e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15937    9 LFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEM 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRS-------VALIFPLPFmlkrfpyCGSSVLSHSYCLHQEVM 189
Cdd:cd15937   89 FLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGfihsiiqVALIIRLPF-------CGPNVLDNFFCDITQVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 190 KLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERlKALNTCVSHICAVLLFYTPMIGLSViHRFg 269
Cdd:cd15937  162 KLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKS-KAASTCITHIIIVFVMFGPAIYIYA-RPF- 238
                        250       260       270
                 ....*....|....*....|....*....|
gi 585657826 270 kQAPHLVQVImGFVYLLVPPLMNPIVYSVK 299
Cdd:cd15937  239 -RSFPMDKVV-AVFHTVIFPLLNPMIYTLR 266
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
38-304 1.84e-33

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 123.81  E-value: 1.84e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHE-PMYLFLSMLALTDLGLSLCTLPTVL-GIFWIGMREIGHDACFAQLFFIHCLSFLE 115
Cdd:cd15941   10 IYLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLaGLLTLSGRTISFEGCVVQLYAFHFLASTE 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 116 SSVLLSMAFDRFVAICRPLHYASILT-NTAIGRIGLASLGRSV--ALIFPLPFmlkRFPYCGSSVLSHSYCLHQEVMKLA 192
Cdd:cd15941   90 CFLYTVMAYDRYLAICHPLHYPTAMNrRMCAGLAGGTWATGAThaAIHTSLTF---RLPYCGPCQIAYFFCDIPPVLKLA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 193 CADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQA 272
Cdd:cd15941  167 CADTTINELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSSQAG 246
                        250       260       270
                 ....*....|....*....|....*....|..
gi 585657826 273 PHLVQVImgfvYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15941  247 AGAPAVF----YTIVTPMLNPFIYTLRNKEVK 274
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
37-299 5.05e-33

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 122.67  E-value: 5.05e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15938    9 LAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEM 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACADI 196
Cdd:cd15938   89 FLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACTDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSiygmFVIVSTVGVDS----LLILFSYALILrtvMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQA 272
Cdd:cd15938  169 CVTE----LLMVSNSGLIStvcfVVLVTSYTTIL---VTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFPV 241
                        250       260
                 ....*....|....*....|....*..
gi 585657826 273 PHLVQVImgfvYLLVPPLMNPIVYSVK 299
Cdd:cd15938  242 DKHVSVL----YNVITPMLNPLIYTLR 264
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
31-299 3.34e-22

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 93.51  E-value: 3.34e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHC 110
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 111 LSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYClhqevmk 190
Cdd:cd00637   81 SLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWP------- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 191 lacaDIKANSIYGMFVIVSTVGVDSLLILFSYALILRTV--------------MSIASRAERLKALNTCVSHICAVLLFY 256
Cdd:cd00637  154 ----DLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLrrhrrrirssssnsSRRRRRRRERKVTKTLLIVVVVFLLCW 229
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 585657826 257 TPMIGLSVIHRFGKQAPHLVQVIMGFVYLLV--PPLMNPIVYSVK 299
Cdd:cd00637  230 LPYFILLLLDVFGPDPSPLPRILYFLALLLAylNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
45-296 3.08e-21

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 90.82  E-value: 3.08e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826   45 GNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP-----TVLGIFWIgmreIGHDACFAQLFFIHCLSFLESSVL 119
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPfwlvyYLNHGDWP----FGSALCKIVGALFVVNGYASILLL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  120 LSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSsvlSHSYCLHQEVMKLACadikaN 199
Cdd:pfam00001  77 TAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEG---NVTVCFIDFPEDLSK-----P 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  200 SIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERL-------KALNTCVSHICAVLLFYTP---MIGLSVIHRFG 269
Cdd:pfam00001 149 VSYTLLISVLGFLLPLLVILVCYTLIIRTLRKSASKQKSSertqrrrKALKTLAVVVVVFILCWLPyhiVNLLDSLALDC 228
                         250       260
                  ....*....|....*....|....*...
gi 585657826  270 KQAPHLVQVIMGFVYL-LVPPLMNPIVY 296
Cdd:pfam00001 229 ELSRLLDKALSVTLWLaYVNSCLNPIIY 256
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
30-311 2.89e-12

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 65.66  E-value: 2.89e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACfaqlFFIH 109
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLC----RFWI 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 110 CLSFLESSV----LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPlPFMLKRFPycGSSVLSHSYCLH 185
Cdd:cd14967   77 ALDVLCCTAsilnLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLP-PLVGWRDE--TQPSVVDCECEF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 186 QEvmklacadikaNSIYGMFVIVSTVGVDSLLILFSYALILRtvmsIASRAerLKALNTCVSHICAVLLFYTPMIGLSVI 265
Cdd:cd14967  154 TP-----------NKIYVLVSSVISFFIPLLIMIVLYARIFR----VARRE--LKAAKTLAIIVGAFLLCWLPFFIIYLV 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 585657826 266 HRFGKQAPHLVQVIMGFVYLL-VPPLMNPIVYSVKTKQIRdrvtRAF 311
Cdd:cd14967  217 SAFCPPDCVPPILYAVFFWLGyLNSALNPIIYALFNRDFR----RAF 259
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
35-164 1.49e-09

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 57.63  E-value: 1.49e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLC-TLPTVlgIFWIGMREIGHDA-C----FAQLFFI 108
Cdd:cd15196    7 LATILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALFnVLPQL--IWDITYRFYGGDLlCrlvkYLQVVGM 84
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 585657826 109 hclsFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLgrsVALIFPLP 164
Cdd:cd15196   85 ----YASSYVLVATAIDRYIAICHPLSSHRWTSRRVHLMVAIAWV---LSLLLSIP 133
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
37-169 3.81e-09

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 56.59  E-value: 3.81e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMRE-IGHDACFAQLFFIHCLSFLE 115
Cdd:cd14979    9 AIFVVGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPWaFGDGGCKLYYFLFEACTYAT 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 585657826 116 SSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKR 169
Cdd:cd14979   89 VLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGI 142
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
36-166 1.12e-08

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 55.37  E-value: 1.12e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREI-GHDACFAQLFFIHCLSFL 114
Cdd:cd14997    8 GVIFVVGVLGNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVETWAREPWLlGEFMCKLVPFVELTVAHA 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 585657826 115 ESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFM 166
Cdd:cd14997   88 SVLTILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFI 139
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
35-307 2.54e-08

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 54.14  E-value: 2.54e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMY----LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIF----WIGmreiGHDACFAqlf 106
Cdd:cd14993    3 LIVLYvvvfLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENvyrpWVF----GEVLCKA--- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 107 fihcLSFLE-----SSV--LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSS--V 177
Cdd:cd14993   76 ----VPYLQgvsvsASVltLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSEpgT 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 178 LSHSYCLH---QEVMKLacadikansIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSH------ 248
Cdd:cd14993  152 ITIYICTEdwpSPELRK---------AYNVALFVVLYVLPLLIISVAYSLIGRRLWRRKPPGDRGSANSTSSRRilrskk 222
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 585657826 249 ------ICAVLLF---YTPMIGLSVIHRFGKQAPHLVQVIMGFVYLLVPPL------MNPIVYSVKTKQIRDRV 307
Cdd:cd14993  223 kvarmlIVVVVLFalsWLPYYVLSILLDFGPLSSEESDENFLLILPFAQLLgysnsaINPIIYCFMSKKFRRGF 296
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
27-227 4.14e-08

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 53.41  E-value: 4.14e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  27 LHIWISIPLCfmyLVSILGNCMILFIIkTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgiFWIGMREIGHDACFAQLF 106
Cdd:cd14978    2 LYGYVLPVIC---IFGIIGNILNLVVL-TRKSMRSSTNVYLAALAVSDILVLLSALPLFL--LPYIADYSSSFLSYFYAY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 107 FIHCLSFLE-----SSVLL--SMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLS 179
Cdd:cd14978   76 FLPYIYPLAntfqtASVWLtvALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNS 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 585657826 180 HSYCLHQEVMKLACADIKANSIygMFVIVSTVGVDSLLILFSYALILR 227
Cdd:cd14978  156 YYYVIPTLLRQNETYLLKYYFW--LYAIFVVLLPFILLLILNILLIRA 201
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
29-305 4.21e-07

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 50.28  E-value: 4.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd14969    1 YVLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLpfmlkrfpyCGSSvlshSYCLhqEV 188
Cdd:cd14969   81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFIWLYGLFWALPPL---------FGWS----SYVP--EG 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 189 MKLACA----DIKANSI-YGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERL--------------KALNTCVSHI 249
Cdd:cd14969  146 GGTSCSvdwySKDPNSLsYIVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKRAARRknsaitkrtkkaekKVAKMVLVMI 225
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 585657826 250 CAVLLFYTPMIGLSVIHRFGKqaPHLVQVIMGFvyllVPPLM-------NPIVYSVKTKQIRD 305
Cdd:cd14969  226 VAFLIAWTPYAVVSLYVSFGG--ESTIPPLLAT----IPALFaksstiyNPIIYVFMNKQFRR 282
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
29-305 1.69e-06

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 48.52  E-value: 1.69e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP----TVLGIFWIGMREIGHDACFAQ 104
Cdd:cd15213    1 ITLAILMILMIFVGFLGNSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSLVCMPfaavTIITGRWIFGDIFCRISAMLY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 105 LFFIhclsfLES-SVLLSMAFDRFVAICRPL-----HYASILTntaigrigLASLGRSVALIFPLPF------MLKRFPY 172
Cdd:cd15213   81 WFFV-----LEGvAILLIISVDRYLIIVQRQdklnpHRAKILI--------AVSWVLSFCVSFPPLVgwgkyeFPPRAPQ 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 173 CgssVLSHSyclhqevmklacaDIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKALNTCVSHICav 252
Cdd:cd15213  148 C---VLGYT-------------ESPADRIYVVLLLVAVFFIPFLIMLYSYFCILNTVRSFKTRAFTTILILFIGFSVC-- 209
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 585657826 253 LLFYTPMIGLSVIHRFGKQAPHLVQVIMGFVYLlvPPLMNPIVYSVKTKQIRD 305
Cdd:cd15213  210 WLPYTVYSLLSVFSRYSSSFYVISTCLLWLSYL--KSAFNPVIYCWRIKKFRE 260
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
41-143 2.99e-06

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 48.01  E-value: 2.99e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  41 VSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIfwigmrEIGHDACFAQLFFIHC--LSFLESSV 118
Cdd:cd15069   13 LSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITI------SLGFCTDFHSCLFLACfvLVLTQSSI 86
                         90       100
                 ....*....|....*....|....*..
gi 585657826 119 --LLSMAFDRFVAICRPLHYASILTNT 143
Cdd:cd15069   87 fsLLAVAVDRYLAIKVPLRYKSLVTGK 113
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
37-166 3.16e-06

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 47.63  E-value: 3.16e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHE--PMYLFLSMLALTDLGLSLCTLPTVL-----GIFWIGMREIGHDACFAQLFFIh 109
Cdd:cd14981    9 LMFVFGVLGNLLALIVLARSSKSHKwsVFYRLVAGLAITDLLGILLTSPVVLavyasNFEWDGGQPLCDYFGFMMSFFG- 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 585657826 110 cLSFLesSVLLSMAFDRFVAICRPLHYaSILTNTAIGRIGLASLGRSVALIFPLPFM 166
Cdd:cd14981   88 -LSSL--LIVCAMAVERFLAITHPFFY-NSHVKKRRARLMLGAVWAFALLIASLPLL 140
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
40-229 1.10e-05

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 46.09  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIfwigmrEIGHDACFAQLFFIHC--LSFLESS 117
Cdd:cd14968   12 VLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAILI------SLGLPTNFHGCLFMAClvLVLTQSS 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 118 V--LLSMAFDRFVAICRPLHYASILT-NTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLaca 194
Cdd:cd14968   86 IfsLLAIAIDRYLAIKIPLRYKSLVTgRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESGCGEGGIQCLFEEVIPM--- 162
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 585657826 195 dikanSIYGMFVIVSTVGVDSLLILFSYALILRTV 229
Cdd:cd14968  163 -----DYMVYFNFFACVLVPLLIMLVIYLRIFRVI 192
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
38-165 1.59e-05

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 45.81  E-value: 1.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgifwigMREIGHDACFAQLFF-IH-CLSFLE 115
Cdd:cd15312   10 AILLTVFGNLMVIISISHFKQLHSPTNFLILSLAITDFLLGFLVMPYSM------VRSVESCWYFGDLFCkIHsSLDMML 83
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 585657826 116 SSV----LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPF 165
Cdd:cd15312   84 STTsifhLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFGVVF 137
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
40-307 2.59e-05

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 44.96  E-value: 2.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAqLFFIHCLSFLeSSV- 118
Cdd:cd15001   11 VLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKA-VAYLQLLSFI-CSVl 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 -LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYCLHqevmklACADIK 197
Cdd:cd15001   89 tLTAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILASPVLFGQGLVRYESENGVTVYHCQK------AWPSTL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 198 ANSIYGMFVIVSTVGVDSLLILFSYAlilrtvmsiasRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGkqapHLVQ 277
Cdd:cd15001  163 YSRLYVVYLAIVIFFIPLIVMTFAYA-----------RDTRKQVIKMLISVVVLFAVCWGPLLIDNLLVSFD----VIST 227
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 585657826 278 VIMGFVYLLVPPL---------MNPIVYSVKTKQIRDRV 307
Cdd:cd15001  228 LHTQALKYMRIAFhllsyanscINPIIYAFMSKNFRSSF 266
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
40-148 3.61e-05

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 44.40  E-value: 3.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLglsLCTLPTVLGIFWIGMREIGHDAcFAQLFFIH---------C 110
Cdd:cd15103   12 IVSLLENILVILAIAKNKNLHSPMYFFICSLAVADM---LVSVSNALETIVIILLNNGYLV-PRDSFEQHidnvidsmiC 87
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 585657826 111 LSFLES-SVLLSMAFDRFVAICRPLHYASILTNTAIGRI 148
Cdd:cd15103   88 SSLLASiCSLLAIAVDRYITIFYALRYHSIMTVRRAGVI 126
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
31-142 4.01e-05

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 44.21  E-value: 4.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFihC 110
Cdd:cd14972    1 VLVVAIVLGVFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSL--V 78
                         90       100       110
                 ....*....|....*....|....*....|...
gi 585657826 111 LSFLESSV-LLSMAFDRFVAICRPLHYASILTN 142
Cdd:cd14972   79 LSLLASAYsLLAIAVDRYISIVHGLTYVNNVTN 111
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
33-229 6.07e-05

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 43.90  E-value: 6.07e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  33 IPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTvlGIFWIGMRE--IGHDAC----FAQLF 106
Cdd:cd14986    5 AVLGVLFVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADLVVAFFTVLT--QIIWEATGEwvAGDVLCrivkYLQVV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 107 FIHCLSFLessvLLSMAFDRFVAICRPLhyaSILTNTAIGRIGLASlGRSVALIFPLP----FMLKR----FPYCGSSVL 178
Cdd:cd14986   83 GLFASTYI----LVSMSLDRYQAIVKPM---SSLKPRKRARLMIVV-AWVLSFLFSIPqlviFVERElgdgVHQCWSSFY 154
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 585657826 179 SHSYclhqevmklacadIKANSIYGMFVIVStvgVDSLLILFSYALILRTV 229
Cdd:cd14986  155 TPWQ-------------RKVYITWLATYVFV---IPLIILSYCYGRILRTI 189
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
35-138 6.28e-05

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 43.95  E-value: 6.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFL 114
Cdd:cd15197    7 LWVLFVFIVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVGLINVLTDIIWRITVEWRAGDFACKVIRYLQVVVTYA 86
                         90       100
                 ....*....|....*....|....
gi 585657826 115 ESSVLLSMAFDRFVAICRPLHYAS 138
Cdd:cd15197   87 STYVLVALSIDRYDAICHPMNFSQ 110
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
35-162 7.83e-05

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 43.60  E-value: 7.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVL-----GIFWIgmreIGHDACFAQLFFIH 109
Cdd:cd15005    7 LGLILCVSLAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPFVMasvrhGSGWI----YGALSCKVIAFLAV 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 585657826 110 CLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFP 162
Cdd:cd15005   83 LFCFHSAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAFP 135
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
29-137 9.15e-05

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 43.09  E-value: 9.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgifwigMREIGHDACFAQLFfi 108
Cdd:cd15064    1 VLISVLLSLIILATILGNALVIAAILLTRKLHTPANYLIASLAVADLLVAVLVMPLSA------VYELTGRWILGQVL-- 72
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 585657826 109 hCLSFLESSV---------LLSMAFDRFVAICRPLHYA 137
Cdd:cd15064   73 -CDIWISLDVtcctasilhLCVIALDRYWAITDAVEYA 109
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
36-229 1.24e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 42.98  E-value: 1.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP-TVLGIF---WIgmreIGHDACFAqLFFIHCL 111
Cdd:cd15203    8 GLIIVLGVVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPfTLIYTLtknWP----FGSILCKL-VPSLQGV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 112 SFLESSV-LLSMAFDRFVAICRPLhYASILTNTAIGRIGLASLGrSVALIFPLPFM--LKRFPYcGSSVLSHSYCLHQev 188
Cdd:cd15203   83 SIFVSTLtLTAIAIDRYQLIVYPT-RPRMSKRHALLIIALIWIL-SLLLSLPLAIFqeLSDVPI-EILPYCGYFCTES-- 157
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 585657826 189 mklaCADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTV 229
Cdd:cd15203  158 ----WPSSSSRLIYTISVLVLQFVIPLLIISFCYFRISLKL 194
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
29-304 1.24e-04

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 42.89  E-value: 1.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15301    1 VLIVIVAAVLSLVTVGGNVMVMISFKIDKQLQTISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAID 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHY-ASILTNTAIGRIGLASLgrsVALIFPLPFMLKrFPYC-GSSVLSHSYCLHQ 186
Cdd:cd15301   81 YLASNASVLNLLIISFDRYFSVTRPLTYrARRTTKKAAVMIASAWI---ISLLLWPPWIYS-WPYIeGKRTVPAGTCYIQ 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 187 EvmklacadIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERlKALNTCVSHICAVLLFYTPMIGLSVIH 266
Cdd:cd15301  157 F--------LETNPYVTFGTALAAFYVPVTIMCILYWRIWRETKKRQKKQES-KAAKTLSAILLAFIVTWTPYNVLVLIK 227
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 585657826 267 RFGKQAPHLVQVIMGFVYLL--VPPLMNPIVYSVKTKQIR 304
Cdd:cd15301  228 AFFPCSDTIPTELWDFSYYLcyINSTINPLCYALCNAAFR 267
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
40-151 1.26e-04

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 42.80  E-value: 1.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACfaQLFFIHCLSFLESSV- 118
Cdd:cd15073   12 IISTISNGIVLVTFVKFRELRTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGC--QWYAFLNIFFGMASIg 89
                         90       100       110
                 ....*....|....*....|....*....|....
gi 585657826 119 -LLSMAFDRFVAICRPLHYASILTNTAIGRIGLA 151
Cdd:cd15073   90 lLTVVAVDRYLTICRPDLGRKMTTNTYTVMILLA 123
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
30-239 1.40e-04

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 42.82  E-value: 1.40e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACfaQLFF-I 108
Cdd:cd15058    2 GLLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWC--ELWTsV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 109 HCLSFLES-SVLLSMAFDRFVAICRPLHYASILTN----TAIGRIGLASlgrsvALIFPLPFMLKrfpycgssvlsHSYC 183
Cdd:cd15058   80 DVLCVTASiETLCVIAVDRYIAITRPLRYQVLLTKrrarVIVCVVWIVS-----ALVSFVPIMNQ-----------WWRA 143
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 184 LHQEVMKL----ACADIKANSIYGMFVIVSTVGVDSLLILFSYAlilrTVMSIASRAERL 239
Cdd:cd15058  144 NDPEANDCyqdpTCCDFRTNMAYAIASSVVSFYIPLLIMIFVYA----RVFLIATRQLQL 199
7tmA_GPR19 cd15008
G protein-coupled receptor 19, member of the class A family of seven-transmembrane G ...
32-136 1.58e-04

G protein-coupled receptor 19, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 19 is an orphan receptor that is expressed predominantly in neuronal cells during mouse embryogenesis. Its mRNA is found frequently over-expressed in patients with small cell lung cancer. GPR19 shares a significant amino acid sequence identity with the D2 dopamine and neuropeptide Y families of receptors. Human GPR19 gene, intronless in the coding region, also has a distribution in brain overlapping that of the D2 dopamine receptor gene, and is located on chromosome 12. GPR19 is a member of the class A family of GPCRs, which represents a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320137 [Multi-domain]  Cd Length: 275  Bit Score: 42.51  E-value: 1.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  32 SIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCL 111
Cdd:cd15008    3 SLVFGVLWLVSVFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLLSVASAPFVLLQFTSGRWTLGSAMCKLVRYFQYLT 82
                         90       100
                 ....*....|....*....|....*
gi 585657826 112 SFLESSVLLSMAFDRFVAICRPLHY 136
Cdd:cd15008   83 PGVQIYVLLSICVDRFYTIVYPLSF 107
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
40-305 2.63e-04

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 41.76  E-value: 2.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSVL 119
Cdd:cd15085   12 TFSIFNNVLVIAVTLKNPQLRNPINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAVNYFGIVSLWSL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 120 LSMAFDRFVAICRPLhyASILTNTAIGRIGLaslgrsvALIFPLPFMLKRFPYCGSSvlshSYclHQEVMKLACA----- 194
Cdd:cd15085   92 TLLAYERYNVVCKPM--GGLKLSTKRGYQGL-------LFIWLFCLFWAVAPLFGWS----SY--GPEGVQTSCSigwee 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 DIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERL----------KALNTCVSHICAVLLFYTPMIGLSV 264
Cdd:cd15085  157 RSWSNYSYLILYFLMCFVIPVAIIGFSYGNVLRSLHKLNKKIEQQggkncpeeeeRAVIMVLAMVIAFLICWLPYTVFAL 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 585657826 265 IHRFGKQ---APHLVQVIMGFVYllVPPLMNPIVYSVKTKQIRD 305
Cdd:cd15085  237 IVVVNPElsiSPLAATMPTYFAK--TSPVYNPIIYIFLNKQFRE 278
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
35-185 2.89e-04

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 41.68  E-value: 2.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDL-GLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSF 113
Cdd:cd15212    7 LLAIFLLSSLGNCAVIGVIVKHRQLRTVTNAFILSLSLSDLlTALLCLPFAFLTLFSRPGWLFGDRLCLANGFFNACFGI 86
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 585657826 114 LESSVLLSMAFDRFVAICRPLHyASILTNTAIGRIGLASLgrsVALIFPLPFMLKRFPYCGSSVLSHSYCLH 185
Cdd:cd15212   87 VSTLTMTLISFDRYYAIVRQPQ-GKIGRRRALQLLAAAWL---TALGFSLPWYLLASAPEYYEKLGFYHCLY 154
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
35-134 2.98e-04

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 41.71  E-value: 2.98e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLC-TLPTVLgifW-IGMREIGHDACFAQLFFIHCLS 112
Cdd:cd15386    7 LAAILVVATAGNLAVLLAMYRMRRKMSRMHLFVLHLALTDLVVALFqVLPQLI---WeITYRFQGPDLLCRAVKYLQVLS 83
                         90       100
                 ....*....|....*....|...
gi 585657826 113 FLESS-VLLSMAFDRFVAICRPL 134
Cdd:cd15386   84 MFASTyMLIMMTVDRYIAVCHPL 106
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
36-170 3.16e-04

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 41.79  E-value: 3.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLgLSLCTLPTVLGIFWIGMREIGHDACfaQLF-FIHCLSFL 114
Cdd:cd15079    8 IFLGIVSLLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDF-LMMIKMPIFIYNSFYEGWALGPLGC--QIYaFLGSLSGI 84
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 585657826 115 ESSVLLSM-AFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRF 170
Cdd:cd15079   85 GSIWTNAAiAYDRYNVIVKPLNGNPLTRGKALLLILFIWLYALPWALLPLLFGWGRY 141
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
38-171 3.54e-04

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 41.34  E-value: 3.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESS 117
Cdd:cd15979   10 IFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVFCMPFTLIPNLMGTFIFGEVICKAVAYLMGVSVSVSTF 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 585657826 118 VLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLP--FMLKRFP 171
Cdd:cd15979   90 SLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPvySVTVPVP 145
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
29-136 4.48e-04

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 41.11  E-value: 4.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15297    1 VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALD 80
                         90       100
                 ....*....|....*....|....*...
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHY 136
Cdd:cd15297   81 YVVSNASVMNLLIISFDRYFCVTKPLTY 108
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
31-145 5.50e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 41.00  E-value: 5.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPtvlgiFWIgMREIGHDACFAQLF--FI 108
Cdd:cd15055    3 LYIVLSSISLLTVLGNLLVIISISHFKQLHTPTNLLLLSLAVADFLVGLLVMP-----FSM-IRSIETCWYFGDTFckLH 76
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 585657826 109 HCLSFLESSV----LLSMAFDRFVAICRPLHYASILTNTAI 145
Cdd:cd15055   77 SSLDYILTSAsifnLVLIAIDRYVAVCDPLLYPTKITIRRV 117
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
29-141 6.03e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 40.89  E-value: 6.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgifwigMREIGHDACFAQLF-- 106
Cdd:cd15317    1 VIIYIVLVLAMLITVSGNLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPFSM------IRTVETCWYFGDLFck 74
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 585657826 107 FIHCLSFLESSV----LLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15317   75 FHTGLDLLLCTTsifhLCFIAIDRYYAVCDPLRYPSKIT 113
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
40-143 6.19e-04

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 40.69  E-value: 6.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIfwigmrEIGHDACFAQLFFIHC--LSFLESS 117
Cdd:cd15068   12 VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI------STGFCAACHGCLFIACfvLVLTQSS 85
                         90       100
                 ....*....|....*....|....*...
gi 585657826 118 V--LLSMAFDRFVAICRPLHYASILTNT 143
Cdd:cd15068   86 IfsLLAIAIDRYIAIRIPLRYNGLVTGT 113
7tmA_mAChR_M5 cd15300
muscarinic acetylcholine receptor subtype M5, member of the class A family of ...
40-304 7.06e-04

muscarinic acetylcholine receptor subtype M5, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. M5 mAChR is primarily found in the central nervous system and mediates acetylcholine-induced dilation of cerebral blood vessels. Activation of M5 receptor triggers a variety of cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides, and modulation of potassium channels. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320427 [Multi-domain]  Cd Length: 262  Bit Score: 40.40  E-value: 7.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSVL 119
Cdd:cd15300   12 LITIVGNVLVMISFKVNSQLKTVNNYYLLSLACADLIIGIFSMNLYTSYILMGYWALGSLACDLWLALDYVASNASVMNL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 120 LSMAFDRFVAICRPLHYASILTNTAIG-RIGLASLgrsVALIFPLPFMLKRFPYCGSSVLSHSYCLHQEVMKLACAdika 198
Cdd:cd15300   92 LVISFDRYFSITRPLTYRAKRTPKRAGiMIGLAWL---ISFILWAPPILCWQYFVGKRTVPERECQIQFLSEPTIT---- 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 199 nsiYGMFVIVSTVGVDSLLILfsYALILRTVMSIASRAERLKALntcvshICAVLLFYTPMIGLSVIHRFGKQAPHLVQV 278
Cdd:cd15300  165 ---FGTAIAAFYIPVSVMTIL--YCRIYKETIKERKAAQTLSAI------LLAFIITWTPYNIMVLVSTFCSDCIPLTLW 233
                        250       260
                 ....*....|....*....|....*.
gi 585657826 279 IMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15300  234 HLGYWLCYVNSTVNPMCYALCNKTFR 259
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
29-305 8.43e-04

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 40.34  E-value: 8.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP-TVLGIF---WIGmreiGHDACFAQ 104
Cdd:cd15074    1 IIIGIYLTVIGILSTLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPlAIISAFahrWLF----GDIGCVFY 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 105 LFFIHCLSFLESSVLLSMAFDRFVAICRPlHYASILTNTAIGRiglaslgrSVALIFPLPFMLKRFPYCGSSvlshSYcl 184
Cdd:cd15074   77 GFCGFLFGCCSINTLTAISIYRYLKICHP-PYGPKLSRRHVCI--------VIVAIWLYALFWAVAPLVGWG----SY-- 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 185 HQEVMKLAC--------ADIKANS-IYGMFVIVSTVGVdsLLILFSYALILRTVMSIASRAERLKALNTCVSH------- 248
Cdd:cd15074  142 GPEPFGTSCsidwtgasASVGGMSyIISIFIFCYLLPV--LIIVFSYVKIIRKVKSSRKRVAGFDSRSKRQHKierkvtk 219
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 585657826 249 ----ICAV-LLFYTPMIGLSVIHRFGkqAPHLVQVIMGfvylLVPPLM-------NPIVYSVKTKQIRD 305
Cdd:cd15074  220 vavlICAGfLIAWTPYAVVSMWSAFG--SPDSVPILAS----ILPALFaksscmyNPIIYLLFSSKFRQ 282
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
35-141 9.28e-04

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 40.28  E-value: 9.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDAC--FAQLFFIHCLS 112
Cdd:cd15959    7 LSLAILVIVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVCelWTSVDVLCVTA 86
                         90       100
                 ....*....|....*....|....*....
gi 585657826 113 FLESsvLLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15959   87 SIET--LCAIAVDRYLAITNPLRYEALVT 113
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
37-151 9.42e-04

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 40.32  E-value: 9.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15299   12 ILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASV 91
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIG-RIGLA 151
Cdd:cd15299   92 MNLLVISFDRYFSITRPLTYRAKRTTKRAGvMIGLA 127
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
31-141 9.74e-04

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 40.25  E-value: 9.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHC 110
Cdd:cd15131    3 ITVTCVLLFVVGVTGNLMTMLVVSKYRDMRTTTNLYLSSMAFSDLLIFLCMPLDLYRLWQYRPWNFGDLLCKLFQFVSES 82
                         90       100       110
                 ....*....|....*....|....*....|.
gi 585657826 111 LSFLESSVLLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15131   83 CTYSTILNITALSVERYFAICFPLRAKVVVT 113
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
31-166 1.15e-03

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 39.81  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCF--MYLVSILGNCMIL-FIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFF 107
Cdd:cd15097    1 VIVPVVFslIFLLGTVGNSLVLaVLLRSGQSGHNTTNLFILNLSVADLCFILFCVPFQATIYSLEGWVFGSFLCKAVHFF 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 108 IHCLSFLESSVLLSMAFDRFVAICRPLHYASILT-NTAIGRIGLASLgrsVALIFPLPFM 166
Cdd:cd15097   81 IYLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTpRNAVAAIALIWG---LSLLFAGPYL 137
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
29-145 1.18e-03

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 39.76  E-value: 1.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPlCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIfwigmrEIGHDACFAQLFFI 108
Cdd:cd15070    2 TYISIE-ILIGLCAVVGNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIPLAIVV------SLGVTIHFYSCLFM 74
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 585657826 109 HCL--SFLESSV--LLSMAFDRFVAICRPLHYASILTNTAI 145
Cdd:cd15070   75 SCLlvVFTHASImsLLAIAVDRYLRVKLTVRYRIVTTQRRI 115
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
31-138 1.63e-03

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 39.52  E-value: 1.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACfaQLFFIHC 110
Cdd:cd15321    9 IAAAITFLILFTIFGNVLVIIAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELMGYWYFRKTWC--EIYLALD 86
                         90       100       110
                 ....*....|....*....|....*....|
gi 585657826 111 LSFLESSV--LLSMAFDRFVAICRPLHYAS 138
Cdd:cd15321   87 VLFCTSSIvhLCAISLDRYWSVSRAIEYNS 116
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
31-167 1.93e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 39.26  E-value: 1.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  31 ISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgifwigMREIGHDACFAQLFfihC 110
Cdd:cd15065    2 IGIFLSLIIVLAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAV------VNDLLGYWLFGETF---C 72
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 585657826 111 LSFLESSVLLSMA---------FDRFVAICRPLHYASILTNTAIgRIGLASLGRSVALIFPLPFML 167
Cdd:cd15065   73 NIWISFDVMCSTAsilnlcaisLDRYIHIKKPLKYERWMTTRRA-LVVIASVWILSALISFLPIHL 137
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
40-141 1.94e-03

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 39.15  E-value: 1.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLF-----FIHCLSFL 114
Cdd:cd15354   12 IISLLENILVILAIVKNKNLHSPMYFFVCSLAVADMLVSVSNAWETITIYLLNNRHLVIEDAFVRHIdnvfdSLICISVV 91
                         90       100
                 ....*....|....*....|....*...
gi 585657826 115 ESSV-LLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15354   92 ASMCsLLAIAVDRYVTIFYALRYHNIMT 119
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
29-166 2.18e-03

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 39.05  E-value: 2.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLH-EPMYLFLSMLALTDLGLSLCTLPTVLgIFWIGMREIGHDACFAQLFF 107
Cdd:cd15341    1 IAIAVLCTLCGLLCILENVAVLYLILSSPKLRrKPSYLFIGSLALADFLASVVFACSFV-DFHVFHGVDSSAIFLLKLGG 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 585657826 108 IHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAiGRIGLASLGRSVALIFPLPFM 166
Cdd:cd15341   80 VTMSFTASLGSLLLMAFDRYVCIYYPSEYKALVTRKR-ALVALAVMWVLTALIAYLPLM 137
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
30-305 2.21e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 38.91  E-value: 2.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPL-CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLgifwIG--MREI--GHDACFAQ 104
Cdd:cd15206    1 ELIIPLySVIFLLAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDLLLAVFCMPFTL----VGqlLRNFifGEVMCKLI 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 105 LFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSsvlshsyCL 184
Cdd:cd15206   77 PYFQAVSVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPILVFSNLIPMSRP-------GG 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 185 HQEVMKLacADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAERLKalntcvshICAVLLFY---TPMIG 261
Cdd:cd15206  150 HKCREVW--PNEIAEQAWYVFLDLMLLVIPGLVMSVAYGLISWTLLEAKKRVIRML--------FVIVVEFFicwTPLYV 219
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 585657826 262 LSVIHRF--GKQAPHLVQVIMGFVYLL--VPPLMNPIVYSVKTKQIRD 305
Cdd:cd15206  220 INTWKAFdpPSAARYVSSTTISLIQLLayISSCVNPITYCFMNKRFRQ 267
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
37-304 2.25e-03

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 38.99  E-value: 2.25e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLES 116
Cdd:cd14971    9 LIFLLGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQVSMHASI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSsvlSHSYCLHQEvmklacADI 196
Cdd:cd14971   89 FTLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVLALHRLRNYTPG---NRTVCSEAW------PSR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 197 KANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIA------SRAERLKALNTCVSHICAVLLF--YTPMIGLSVIHRF 268
Cdd:cd14971  160 AHRRAFALCTFLFGYLLPLLLICVCYAAMLRHLWRVAvrpvlsEGSRRAKRKVTRLVLVVVVLFAacWGPIHAILLLVAL 239
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 585657826 269 GKQA---PHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd14971  240 GPFPltyATYALRIWAHCLAYSNSAVNPVLYAFLSEHFR 278
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
35-306 2.75e-03

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 38.92  E-value: 2.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPtvLGIFWIGMRE--IGHDACFAQLFFIHCLS 112
Cdd:cd15195    7 TWVLFVISAAGNLTVLIQLFRRRRAKSHIQILIMHLALADLMVTFFNMP--MDAVWNYTVEwlAGDLMCRVMMFLKQFGM 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 113 FLESSVLLSMAFDRFVAICRPLhyaSILTNTAIGRIGLASlGRSVALIFPLP--FMLkrfpycgsSVLSHSY---CLHQE 187
Cdd:cd15195   85 YLSSFMLVVIALDRVFAILSPL---SANQARKRVKIMLTV-AWVLSALCSIPqsFIF--------SVLRKMPeqpGFHQC 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 188 VMKLACADIKANSIYGMFVIVSTVGVDSLLILFSYALILRTVMSIASRAE------------------RLKALNTCVSHI 249
Cdd:cd15195  153 VDFGSAPTKKQERLYYFFTMILSFVIPLIITVTCYLLILFEISKMAKRARdtpisnrrrsrtnsleraRMRTLRMTALIV 232
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 585657826 250 CAVLLFYTPMIGLSVIHRFGKQA----PHLVQVIMgFVYLLVPPLMNPIVYSVKTKQIRDR 306
Cdd:cd15195  233 LTFIVCWGPYYVLGLWYWFDKESiknlPPALSHIM-FLLGYLNPCLHPIIYGVFMKEIRNW 292
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
37-160 3.15e-03

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 38.62  E-value: 3.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLF-----FIHCL 111
Cdd:cd15351    9 FLGLVSLVENILVVVAIAKNRNLHSPMYYFICCLAVSDMLVSVSNLIETLFMLLLEHGVLVCRAPMLQHMdnvidTMICS 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 585657826 112 SFLES-SVLLSMAFDRFVAICRPLHYASILTN----TAIGRIGLASLGRSVALI 160
Cdd:cd15351   89 SVVSSlSFLGAIAVDRYITIFYALRYHSIMTLqravNAIAGIWLASTVSSTLFI 142
7tmA_mAChR_GAR-2-like cd15302
muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of ...
29-304 3.23e-03

muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320429 [Multi-domain]  Cd Length: 266  Bit Score: 38.57  E-value: 3.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDL-----GLSLCTLPTVLGIFWIgmreIGHDACFA 103
Cdd:cd15302    1 ILLALITAILSIITVIGNILVLLSFYVDRNIRQPSNYFIASLAVSDLligleSMPFYTVYVLNGDYWP----LGWVLCDL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 104 QLFFIHCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSyC 183
Cdd:cd15302   77 WLSVDYTVCLVSIYTVLLITIDRYCSVKIPAKYRNWRTPRKVLLIIAITWIIPALLFFISIFGWQYFTGQGRSLPEGE-C 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 184 LHQevmklacadIKANSIYGMFVIVSTVGVDSLLILFSYALILRTvmsiASRAerLKALNTCVSHICAVLLFYTPMIGLS 263
Cdd:cd15302  156 YVQ---------FMTDPYFNMGMYIGYYWTTLIVMLILYAGIYRA----ANRA--RKALRTITFILGAFVICWTPYHILA 220
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 585657826 264 VIHRFGKQAPHLVQVIMGFVYLL--VPPLMNPIVYSVKTKQIR 304
Cdd:cd15302  221 TIYGFCEAPPCVNETLYTISYYLcyMNSPINPFCYALANQQFK 263
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
38-141 3.30e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 38.62  E-value: 3.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  38 MYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCtLPTVLGIFWIGMR-EIGHDACFAQLFFIHCLSFLES 116
Cdd:cd15928   10 LMLVGASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDLLIFLV-LPLDLYRLWRYRPwRFGDLLCRLMYFFSETCTYASI 88
                         90       100
                 ....*....|....*....|....*
gi 585657826 117 SVLLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15928   89 LHITALSVERYLAICHPLRAKVLVT 113
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
29-151 3.30e-03

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 38.45  E-value: 3.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15049    1 VLICIATGSLSLVTVGGNILVILSFRVNRQLRTVNNYFLLSLACADLIIGLVSMNLYTVYLVMGYWPLGPLLCDLWLALD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHY-ASILTNTAIGRIGLA 151
Cdd:cd15049   81 YVASNASVMNLLLISFDRYFSVTRPLTYrAKRTPKRAILMIALA 124
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
36-304 3.46e-03

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 38.31  E-value: 3.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLE 115
Cdd:cd15978    8 SLIFLLSVLGNSLIIAVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFTLIPNLLKDFIFGSAVCKTATYFMGISVSVS 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 116 SSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLPFMLKRFPYCGSSVLSHSYClhqevMKLACAD 195
Cdd:cd15978   88 TFNLVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSFTIMLPYPIYSNLVPFTRINNSTGNMC-----RLLWPND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 196 IKANSIYgMFVIVSTVGVDSLLILFSYALI-LRTVMSIASRAERLKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPH 274
Cdd:cd15978  163 VTQQSWY-IFLLLILFLIPGIVMMTAYGLIsLELYRGIKFLMAKKRVIRMLIVIVILFFLCWTPIFSANAWRAFDTRSAD 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 585657826 275 --LVQVIMGFVYLL--VPPLMNPIVYSVKTKQIR 304
Cdd:cd15978  242 rlLSGAPISFIHLLsyTSACVNPIIYCFMNKRFR 275
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
43-304 4.04e-03

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 38.22  E-value: 4.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  43 ILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLglsLCTLPTVLGIFWIGMREIghDACFAQLFFIHCLSF--LESSV-- 118
Cdd:cd15102   15 VLENLLVLIAIWRHMKFHRPMYYFLGNLALSDL---LAGAAYLANILLSGARTL--RLSPAQWFLREGSMFvaLSASVfs 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 119 LLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLgrSVALIFPLPFM----LKRFPYCgSSVLShSYCLHqevmklaca 194
Cdd:cd15102   90 LLAIAIERHLTMAKMKPYGASKTSRVLLLIGACWL--ISLLLGGLPILgwncLGALDAC-STVLP-LYSKH--------- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 195 dikansiYGMFVIVSTVGVdSLLILFSYALILRTVMS------IASRAERLKALNTCVSHICAVLLF-YTPMIGLSVIHR 267
Cdd:cd15102  157 -------YVLFCVTIFAGI-LAAIVALYARIYCLVRAsgrkatRASASPRSLALLKTVLIVLLVFIAcWGPLFILLLLDV 228
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 585657826 268 FG--KQAPHLVQVIMGFVYLLVPPLMNPIVYSVKTKQIR 304
Cdd:cd15102  229 ACpvKTCPILYKADWFLALAVLNSALNPIIYTLRSRELR 267
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
29-151 4.06e-03

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 38.03  E-value: 4.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd17790    1 VLIVITTGILSLVTVTGNLLVLISFKVNSELKTVNNYFLLSLACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILT-NTAIGRIGLA 151
Cdd:cd17790   81 YVASNASVMNLLIISFDRYFSITRPLTYRAKRTpRRAAIMIGLA 124
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
40-148 4.14e-03

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 38.35  E-value: 4.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTlptvlGIFWIGMREIGHDACFAQLFFIH---------C 110
Cdd:cd15353   12 IVSLLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSVSN-----GSETVVITLLNGNDTDAQSFTVNidnvidsviC 86
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 585657826 111 LSFLES-SVLLSMAFDRFVAICRPLHYASILTNTAIGRI 148
Cdd:cd15353   87 SSLLASiCSLLSIAVDRYFTIFYALQYHNIMTVRRAGVI 125
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
37-161 4.72e-03

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 38.29  E-value: 4.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFII---KTEPSLHEPMYLFLSMLALTDLGLSLCTLPTVLGIF-WIGMR-EIGHDACFAQLFFIHCL 111
Cdd:cd15355    9 ALFVVGTVGNSITLYTLarkKSLQHLQSTVHYHLASLALSDLLILLLAMPVELYNFiWVHHPwAFGDAACRGYYFLRDAC 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 585657826 112 SFLESSVLLSMAFDRFVAICRPLHYASIL----TNTAIGRIGLASLGRSVALIF 161
Cdd:cd15355   89 TYATALNVASLSVERYLAICHPFKAKSLMsrsrTKKFISAIWLASALLAIPMLF 142
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
30-164 4.80e-03

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 37.99  E-value: 4.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  30 WISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP-TVLGIFWIGMREIGHDACFAQLFFI 108
Cdd:cd15304    2 WPALLTVIVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPvSMLTILYGYRWPLPSKLCAVWIYLD 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 585657826 109 HCLSFLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLASLGRSVALIFPLP 164
Cdd:cd15304   82 VLFSTASIMHLCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIP 137
7tmA_GPR4 cd15366
proton-sensing G protein-coupled receptor 4, member of the class A family of ...
37-258 5.54e-03

proton-sensing G protein-coupled receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein-coupled receptor 4 (GPR4) is a member of the proton-sensing G-protein-coupled receptor (GPCR) family which also includes the G2 accumulation receptor (G2A, also known as GPR132), the T cell death associated gene-8 receptor (TDAG8, GPR65), ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4). Proton-sensing G-protein coupled receptors sense pH of 7.6 to 6.0 and mediates a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. GPR4 overexpression in melanoma cells was shown to reduce cell migration, membrane ruffling, and cell spreading under acidic pH conditions. Activation of GPR4 via extracellular acidosis is coupled to the G(s), G(q), and G(12/13) pathways.


Pssm-ID: 320488 [Multi-domain]  Cd Length: 280  Bit Score: 37.85  E-value: 5.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  37 FMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLgLSLCTLPTVLGIF-----WIGmreiGHDACFAQLFFIHCL 111
Cdd:cd15366    9 IVIVLGLPTNCLALWAAYLQVRQRNELGVYLLNLSVSDL-LYIATLPLWIDYFlhrdnWIH----GPESCKLFGFIFYTN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 112 SFLESSVLLSMAFDRFVAICRPLHYAS---ILTNTAIGRIGLA-SLGRSVALIFPLPFMLKRFpycgssvlSHSYCLHQE 187
Cdd:cd15366   84 IYISIAFLCCISVDRYLAVAHPLRFAKvrrVKTAVAVSAVVWAiEIGANSAPLFHDELFRDRY--------NHTFCFEKY 155
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 585657826 188 VMKLACADIKANSIYGMFVIVSTvgvdslLILFSYALILRTVMSIAS--RAERLKALNTCVSHICAVLLFYTP 258
Cdd:cd15366  156 PMEDWVAWMNLYRVFVGFLFPWV------LMLFSYRGILRAVRGNVSteQQEKAKIKRLALSLIAIVLLCFAP 222
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
41-141 6.33e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 37.45  E-value: 6.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  41 VSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLglsLCTLPTVLGIFWIGMREIGH-----------DACFAQLFfih 109
Cdd:cd15350   13 VGLLENLLVLVAVIKNKNLHSPMYFFICSLAVSDM---LGSLYKTLENILIILADMGYlnrrgpfetklDDIMDSLF--- 86
                         90       100       110
                 ....*....|....*....|....*....|...
gi 585657826 110 CLSFLESSV-LLSMAFDRFVAICRPLHYASILT 141
Cdd:cd15350   87 CLSLLGSIFsILAIAADRYITIFHALRYHNIMT 119
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
40-141 6.41e-03

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 37.54  E-value: 6.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  40 LVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDlGLSLCTLPTVLGIFWIGMREIGHDACFAQLFFIHCLSFLESSVL 119
Cdd:cd15092   12 VVGLVGNCLVMYVILRHTKMKTATNIYIFNLALAD-TLVLLTLPFQGTDIFLGFWPFGNALCKTVIAIDYYNMFTSTFTL 90
                         90       100
                 ....*....|....*....|..
gi 585657826 120 LSMAFDRFVAICRPLHYASILT 141
Cdd:cd15092   91 TAMSVDRYVAICHPIKALDVRT 112
7tmA_GPR45 cd15403
G protein-coupled receptor 45, member of the class A family of seven-transmembrane G ...
29-130 6.92e-03

G protein-coupled receptor 45, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR45 and closely related proteins found in vertebrates. GPR45 is also called PSP24 in Xenopus and PSP24-alpha (or PSP24-1) in mammals. GPR45 shows the highest sequence homology with GPR63 (PSP24-beta, or PSP24-2). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320525 [Multi-domain]  Cd Length: 301  Bit Score: 37.52  E-value: 6.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  29 IWISIPLCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLCTLP----TVLGIFWIGMREIGHDACFAQ 104
Cdd:cd15403    1 ILLAIVMILMIAIGFLGNAIVCLIVYQKPAMRSAINLLLATLAFSDIMLSLLCMPftavTIITVDWHFGAHFCRISAMLY 80
                         90       100
                 ....*....|....*....|....*..
gi 585657826 105 LFFIhclsfLES-SVLLSMAFDRFVAI 130
Cdd:cd15403   81 WFFV-----LEGvAILLIISVDRFLII 102
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
35-151 7.37e-03

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 37.49  E-value: 7.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLC-TLPTVlgIFWIGMREIGHDACFAQLFFIHCLS- 112
Cdd:cd15385    7 LAVIFAVAVIGNSSVLLALYKTKKKASRMHLFIKHLSLADLVVAFFqVLPQL--CWDITYRFYGPDFLCRIVKHLQVLGm 84
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 585657826 113 FLESSVLLSMAFDRFVAICRPLHYASILTNTAIGRIGLA 151
Cdd:cd15385   85 FASTYMLVMMTADRYIAICHPLKTLQQPTKRSYLMIGSA 123
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
35-134 8.09e-03

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 37.49  E-value: 8.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  35 LCFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLGLSLC-TLPTVlgIFWIGMREIGHDACFAQLFFIHCLSF 113
Cdd:cd15387    7 LALILFLALTGNICVLLAIHTTRHKHSRMYFFMKHLSIADLVVAVFqVLPQL--IWDITFRFYGPDFLCRLVKYLQVVGM 84
                         90       100
                 ....*....|....*....|..
gi 585657826 114 LESS-VLLSMAFDRFVAICRPL 134
Cdd:cd15387   85 FASTyMLLLMSIDRCLAICQPL 106
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
36-307 8.84e-03

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 37.24  E-value: 8.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826  36 CFMYLVSILGNCMILFIIKTEPSLHEPMYLFLSMLALTDLgLSLCTLPT----VLGIFWIGMREIghdACFAQLFFIHCL 111
Cdd:cd14982    8 SLIFILGLLGNILALWVFLRKMKKRSPTTIYMINLALADL-LFVLTLPFriyyYLNGGWWPFGDF---LCRLTGLLFYIN 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 112 SFLESSVLLSMAFDRFVAICRPLHYASILTntaIGRIGLASLGR-SVALIFPLPFMLKRFPYCGSSvlSHSYCLHQEVMK 190
Cdd:cd14982   84 MYGSILFLTCISVDRYLAVVHPLKSRRLRR---KRYAVGVCAGVwILVLVASVPLLLLRSTIAKEN--NSTTCFEFLSEW 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585657826 191 LACADIKANSI-YGMFVIVSTVgvdsllILFSYALILRTVMSIASRA----ERLKALNTCVSHICAVLLFYTP---MIGL 262
Cdd:cd14982  159 LASAAPIVLIAlVVGFLIPLLI------ILVCYSLIIRALRRRSKQSqksvRKRKALRMILIVLAVFLVCFLPyhvTRIL 232
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 585657826 263 SVIHRFGKQAPHLVQVIMGFVYLLVPPL------MNPIVYSVKTKQIRDRV 307
Cdd:cd14982  233 YLLVRLSFIADCSARNSLYKAYRITLCLaslnscLDPLIYYFLSKTFRKRL 283
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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