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Conserved domains on  [gi|585369082|ref|WP_024250660|]
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MULTISPECIES: DUF1627 domain-containing protein [Enterobacteriaceae]

Protein Classification

MntR and DUF1627 domain-containing protein( domain architecture ID 13384482)

MntR and DUF1627 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1627 pfam07789
Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical ...
 88-242 7.76e-114

Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical proteins predicted to be expressed in a number of bacterial species. The region in question is approximately 150 amino acid residues long.


:

Pssm-ID: 429660  Cd Length: 155  Bit Score: 323.17  E-value: 7.76e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585369082   88 IEQRGPQTADELATFFGITSRKVASTLAMAISKGRLIRVNQNGKFRYCMPGDNLPAEPKAASVAETDGKAFPQPAGVALP 167
Cdd:pfam07789   1 IEQDGAKTADELAGKFGTSSRKVASTLAMAIAKGRLARVNQNGKFRYCIPGDNLPADPKAAPVAENDGKAFPQPAGAALP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 585369082  168 VQEAATQEDIKTETVADIVQSLPSFTETQADDLVLPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDIVRQI 242
Cdd:pfam07789  81 VQEAATQEDIKTETVADIVQPLPSFTETQADDLIFPSLHMANLALRRAKNDVQKWERVCAALRELNKHRDIVRQI 155
MntR super family cl34227
Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];
2-48 9.78e-03

Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];


The actual alignment was detected with superfamily member COG1321:

Pssm-ID: 440932 [Multi-domain]  Cd Length: 135  Bit Score: 35.56  E-value: 9.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 585369082   2 ETVFDALKAMGKATSVELAARLDISREEVLNELWELKKAGFVDKSVY 48
Cdd:COG1321   13 KAIYELSEEGGPVRTSDIAERLGVSPPSVTEMLKKLEEKGLVEYEPY 59
 
Name Accession Description Interval E-value
DUF1627 pfam07789
Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical ...
 88-242 7.76e-114

Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical proteins predicted to be expressed in a number of bacterial species. The region in question is approximately 150 amino acid residues long.


Pssm-ID: 429660  Cd Length: 155  Bit Score: 323.17  E-value: 7.76e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585369082   88 IEQRGPQTADELATFFGITSRKVASTLAMAISKGRLIRVNQNGKFRYCMPGDNLPAEPKAASVAETDGKAFPQPAGVALP 167
Cdd:pfam07789   1 IEQDGAKTADELAGKFGTSSRKVASTLAMAIAKGRLARVNQNGKFRYCIPGDNLPADPKAAPVAENDGKAFPQPAGAALP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 585369082  168 VQEAATQEDIKTETVADIVQSLPSFTETQADDLVLPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDIVRQI 242
Cdd:pfam07789  81 VQEAATQEDIKTETVADIVQPLPSFTETQADDLIFPSLHMANLALRRAKNDVQKWERVCAALRELNKHRDIVRQI 155
MntR COG1321
Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];
2-48 9.78e-03

Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];


Pssm-ID: 440932 [Multi-domain]  Cd Length: 135  Bit Score: 35.56  E-value: 9.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 585369082   2 ETVFDALKAMGKATSVELAARLDISREEVLNELWELKKAGFVDKSVY 48
Cdd:COG1321   13 KAIYELSEEGGPVRTSDIAERLGVSPPSVTEMLKKLEEKGLVEYEPY 59
 
Name Accession Description Interval E-value
DUF1627 pfam07789
Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical ...
 88-242 7.76e-114

Protein of unknown function (DUF1627); This is a group of sequences found in hypothetical proteins predicted to be expressed in a number of bacterial species. The region in question is approximately 150 amino acid residues long.


Pssm-ID: 429660  Cd Length: 155  Bit Score: 323.17  E-value: 7.76e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585369082   88 IEQRGPQTADELATFFGITSRKVASTLAMAISKGRLIRVNQNGKFRYCMPGDNLPAEPKAASVAETDGKAFPQPAGVALP 167
Cdd:pfam07789   1 IEQDGAKTADELAGKFGTSSRKVASTLAMAIAKGRLARVNQNGKFRYCIPGDNLPADPKAAPVAENDGKAFPQPAGAALP 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 585369082  168 VQEAATQEDIKTETVADIVQSLPSFTETQADDLVLPSLHMANRELRRAKNHVQKWERVCAALRELNKHRDIVRQI 242
Cdd:pfam07789  81 VQEAATQEDIKTETVADIVQPLPSFTETQADDLIFPSLHMANLALRRAKNDVQKWERVCAALRELNKHRDIVRQI 155
MntR COG1321
Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];
2-48 9.78e-03

Mn-dependent transcriptional regulator MntR, DtxR family [Transcription];


Pssm-ID: 440932 [Multi-domain]  Cd Length: 135  Bit Score: 35.56  E-value: 9.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 585369082   2 ETVFDALKAMGKATSVELAARLDISREEVLNELWELKKAGFVDKSVY 48
Cdd:COG1321   13 KAIYELSEEGGPVRTSDIAERLGVSPPSVTEMLKKLEEKGLVEYEPY 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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