|
Name |
Accession |
Description |
Interval |
E-value |
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
2-531 |
0e+00 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 992.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 2 GKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEGRASIYKSVFSNSSKEMMCFPDFPFPDDFPNF 81
Cdd:pfam00743 1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 82 MHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFP 161
Cdd:pfam00743 81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 162 GLNHFKGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFGT 241
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 242 FLKNNLPTAISDWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPNVKEFTETSAIFEDGTIFEG 321
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 322 IDCVIFATGYSFAYPFLDESIIKSRNNEIILFKGVFPPLLEKSTIAVIGFVQSLGAAIPTVDLQSRWAAQVIKGTCTLPS 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESLVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 402 MEDMMNDINEKMEKKRKWFG--KSETIQTDYIVYMDELSSFIGAKPNIPWLFLTDPKLAMEVYFGPCSPYQFRLVGPGQW 479
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGdsQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPYQYRLVGPGKW 480
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 58102139 480 PGARNAILTQWDRSLKPMQTRVVGRLQKPCFFFhWLKLFAIPILLIAVFLVL 531
Cdd:pfam00743 481 EGARNAILTQWDRILKPLKTRVVEKSSSPASSF-TLKIFGLPVVLVAIFLIL 531
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
5-394 |
2.36e-72 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 236.30 E-value: 2.36e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 5 VAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWkfsdhaeegRASIYKSVFSNSSKEMMCFPDFPFPDDFPNFMHN 84
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTW---------RDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 85 SKIQEYIIAFAKEKNLLKYIQFKTFVSSVnkHPDfATTGQWDVTTErDGKKESAvfDAVMVCSGHHVYPNLPkeSFPGLN 164
Cdd:COG2072 80 DEILAYLEAYADKFGLRRPIRFGTEVTSA--RWD-EADGRWTVTTD-DGETLTA--RFVVVATGPLSRPKIP--DIPGLE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 165 HFKGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRvwdNGYPWDMllvTRFGTFLK 244
Cdd:COG2072 152 DFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR---PNYDPER---GRPANYLG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 245 NNLPTAISD----WLYVKQMNARFKHENYG-LMPLNGVLRKEPVFNDELPASILCGIVS-VKPNVKEFTETSAIFEDGTi 318
Cdd:COG2072 226 LEAPPALNRrdarAWLRRLLRAQVKDPELGlLTPDYPPGCKRPLLSTDYYEALRRGNVElVTGGIERITEDGVVFADGT- 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 319 FEGIDCVIFATGYSFAYPFLDESIIKSRN--NEIILFKGV----FPPLlekstiAVIGFVQSLGAA--IPTVDLQSRWAA 390
Cdd:COG2072 305 EHEVDVIVWATGFRADLPWLAPLDVRGRDgrSGPRAYLGVvvpgFPNL------FFLGPNSPSGHSslTLGAERQARYIA 378
|
....
gi 58102139 391 QVIK 394
Cdd:COG2072 379 RLIA 382
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
3-440 |
1.64e-41 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 155.02 E-value: 1.64e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 3 KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSDHAEEG-----------RASIYKSVFSNSSKEMMCFPD 71
Cdd:PLN02172 11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYRD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 72 FPFPDDFPNFMHNSK-------IQEYIIAFAKEKNLLKYIQFKTFVSSVNkhpdfATTGQWDVTTER-DGKKESAVFDAV 143
Cdd:PLN02172 91 FPFVPRFDDESRDSRrypshreVLAYLQDFAREFKIEEMVRFETEVVRVE-----PVDGKWRVQSKNsGGFSKDEIFDAV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 144 MVCSGHHVYPNLPKesFPGLNHFKGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSgswvmsr 223
Cdd:PLN02172 166 VVCNGHYTEPNVAH--IPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRA------- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 224 vwdngypwdmllvTRFGTFLK-----NNLptaisdWLYVKqmnARFKHEnyglmplngvlrkepvfndelpasilcgivs 298
Cdd:PLN02172 237 -------------SESDTYEKlpvpqNNL------WMHSE---IDTAHE------------------------------- 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 299 vkpnvkeftETSAIFEDGTIFEGiDCVIFATGYSFAYPFLDES-IIKSRNNEI-ILFKGVFPPLLEKStIAVIGfVQSLG 376
Cdd:PLN02172 264 ---------DGSIVFKNGKVVYA-DTIVHCTGYKYHFPFLETNgYMRIDENRVePLYKHVFPPALAPG-LSFIG-LPAMG 331
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 377 AAIPTVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEKK------RKWFGKSETIQTDYIVYMDELSSF 440
Cdd:PLN02172 332 IQFVMFEIQSKWVAAVLSGRVTLPSEDKMMEDINAWYASLealgipKRYTHKLGKIQSEYLNWIAEECGC 401
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
89-353 |
4.08e-14 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 73.03 E-value: 4.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 89 EYIIAFAKEKNLLkyIQFKTFVSSVNKHPDFATtgqwdVTTERDgkkesaVFDA--VMVCSGHHVYPNLPkesfpglnHF 166
Cdd:pfam13738 79 EYLRRVADHFELP--INLFEEVTSVKKEDDGFV-----VTTSKG------TYQAryVIIATGEFDFPNKL--------GV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 167 KGKCFHSRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSGSWvmsrvwdngypwdmllvtrfgtflkNN 246
Cdd:pfam13738 138 PELPKHYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEW-------------------------ED 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 247 LPTAISDWL--YVKQmnaRFKHenyglmplngVLRKEPV---FNDElpasilcgivsvkpnVKEFTETSAI----FEDGT 317
Cdd:pfam13738 193 RDSDPSYSLspDTLN---RLEE----------LVKNGKIkahFNAE---------------VKEITEVDVSykvhTEDGR 244
|
250 260 270
....*....|....*....|....*....|....*.
gi 58102139 318 IFEGIDCVIFATGYSFAYPFLDESIIKSRNNEIILF 353
Cdd:pfam13738 245 KVTSNDDPILATGYHPDLSFLKKGLFELDEDGRPVL 280
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
3-40 |
5.62e-06 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 48.68 E-value: 5.62e-06
10 20 30
....*....|....*....|....*....|....*...
gi 58102139 3 KKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGL 40
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGL 39
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
4-40 |
4.33e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 46.03 E-value: 4.33e-05
10 20 30
....*....|....*....|....*....|....*..
gi 58102139 4 KVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGL 40
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGL 37
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
7-67 |
5.44e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 41.36 E-value: 5.44e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 58102139 7 IIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGL---WKFSDHAEEGRASIYKSVFSNSSKEMM 67
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNaysYRVPGYVFDYGAHIFHGSDEPNVRDLL 64
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
127-210 |
5.85e-05 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 45.11 E-value: 5.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 58102139 127 VTTErDGKKESAvfDAVMVCSGhhVYPNLPKesFPGLNHFKGKcfhsrdykepGV----------FNGKRVLVVGLGNSG 196
Cdd:COG0492 91 VTTD-DGTEYEA--KAVIIATG--AGPRKLG--LPGEEEFEGR----------GVsycatcdgffFRGKDVVVVGGGDSA 153
|
90
....*....|....
gi 58102139 197 CDIATELSRTAEQV 210
Cdd:COG0492 154 LEEALYLTKFASKV 167
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
2-40 |
7.51e-05 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 45.15 E-value: 7.51e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 58102139 2 GKKVAIIGAGVSGLAsirsCLEE----GLEPTCFEKSNDIGGL 40
Cdd:PRK12810 143 GKKVAVVGSGPAGLA----AADQlaraGHKVTVFERADRIGGL 181
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
1-39 |
2.63e-04 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 43.33 E-value: 2.63e-04
10 20 30
....*....|....*....|....*....|....*....
gi 58102139 1 MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGG 40
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
2-39 |
3.39e-04 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 42.99 E-value: 3.39e-04
10 20 30
....*....|....*....|....*....|....*...
gi 58102139 2 GKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGG 39
Cdd:COG1231 7 GKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGG 44
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
2-43 |
3.81e-04 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 43.20 E-value: 3.81e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 58102139 2 GKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKF 43
Cdd:PRK12769 327 DKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTF 368
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
2-34 |
4.74e-04 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 42.76 E-value: 4.74e-04
10 20 30
....*....|....*....|....*....|...
gi 58102139 2 GKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKS 34
Cdd:COG0771 4 GKKVLVLGLGKSGLAAARLLAKLGAEVTVSDDR 36
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
2-40 |
7.79e-04 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 42.04 E-value: 7.79e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 58102139 2 GKKVAIIGAGVSGLAsirsC----LEEGLEPTCFEKSNDIGGL 40
Cdd:COG0493 121 GKKVAVVGSGPAGLA----AayqlARAGHEVTVFEALDKPGGL 159
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
1-40 |
2.01e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 40.64 E-value: 2.01e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 58102139 1 MGKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGL 40
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGI 42
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
2-40 |
9.78e-03 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 38.62 E-value: 9.78e-03
10 20 30
....*....|....*....|....*....|....*....
gi 58102139 2 GKKVAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGL 40
Cdd:PRK11749 140 GKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGL 178
|
|
|