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BRCA2-interacting transcriptional repressor EMSY isoform X29 [Homo sapiens]
ENT and PHA03247 domain-containing protein( domain architecture ID 13690837)
ENT and PHA03247 domain-containing protein
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
ENT | pfam03735 | ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that ... |
17-81 | 5.61e-28 | ||||
ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that is amplified in breast cancer and interacts with BRCA2. The N terminus of this protein is found to be similar to other vertebrate and plant proteins of unknown function. This domain has a completely conserved histidine residue that may be functionally important. : Pssm-ID: 461032 Cd Length: 71 Bit Score: 107.65 E-value: 5.61e-28
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PABP-1234 super family | cl31127 | polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
844-1015 | 2.10e-03 | ||||
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range. The actual alignment was detected with superfamily member TIGR01628: Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 42.10 E-value: 2.10e-03
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COG3889 super family | cl28569 | Extracellular solute-binding protein, contains Ig-fold domain [General function prediction ... |
484-585 | 2.94e-03 | ||||
Extracellular solute-binding protein, contains Ig-fold domain [General function prediction only]; The actual alignment was detected with superfamily member COG3889: Pssm-ID: 443097 [Multi-domain] Cd Length: 878 Bit Score: 41.94 E-value: 2.94e-03
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Name | Accession | Description | Interval | E-value | ||||
ENT | pfam03735 | ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that ... |
17-81 | 5.61e-28 | ||||
ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that is amplified in breast cancer and interacts with BRCA2. The N terminus of this protein is found to be similar to other vertebrate and plant proteins of unknown function. This domain has a completely conserved histidine residue that may be functionally important. Pssm-ID: 461032 Cd Length: 71 Bit Score: 107.65 E-value: 5.61e-28
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PABP-1234 | TIGR01628 | polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
844-1015 | 2.10e-03 | ||||
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range. Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 42.10 E-value: 2.10e-03
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COG3889 | COG3889 | Extracellular solute-binding protein, contains Ig-fold domain [General function prediction ... |
484-585 | 2.94e-03 | ||||
Extracellular solute-binding protein, contains Ig-fold domain [General function prediction only]; Pssm-ID: 443097 [Multi-domain] Cd Length: 878 Bit Score: 41.94 E-value: 2.94e-03
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Name | Accession | Description | Interval | E-value | ||||
ENT | pfam03735 | ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that ... |
17-81 | 5.61e-28 | ||||
ENT domain; This presumed domain is named after Emsy N Terminus (ENT). Emsy is a protein that is amplified in breast cancer and interacts with BRCA2. The N terminus of this protein is found to be similar to other vertebrate and plant proteins of unknown function. This domain has a completely conserved histidine residue that may be functionally important. Pssm-ID: 461032 Cd Length: 71 Bit Score: 107.65 E-value: 5.61e-28
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PABP-1234 | TIGR01628 | polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
844-1015 | 2.10e-03 | ||||
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range. Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 42.10 E-value: 2.10e-03
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COG3889 | COG3889 | Extracellular solute-binding protein, contains Ig-fold domain [General function prediction ... |
484-585 | 2.94e-03 | ||||
Extracellular solute-binding protein, contains Ig-fold domain [General function prediction only]; Pssm-ID: 443097 [Multi-domain] Cd Length: 878 Bit Score: 41.94 E-value: 2.94e-03
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Blast search parameters | ||||
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