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Conserved domains on  [gi|575003697|gb|ETW64106|]
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hypothetical protein PFMC_00130 [Plasmodium falciparum CAMP/Malaysia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CPP1-like super family cl13300
Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and ...
 1360-1423 3.46e-03

Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and eukaryotes. The plant member, CHAPERONE-LIKE PROTEIN OF POR1 (CPP1), is an essential protein for chloroplast development, plays a role in the regulation of POR (light-dependent protochlorophyllide oxidoreductase) stability and function.


The actual alignment was detected with superfamily member pfam11833:

Pssm-ID: 432112  Cd Length: 194  Bit Score: 40.29  E-value: 3.46e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 575003697  1360 SLYNMIFRGVNFWKGLAIYLGALS-----GGAIGQMILSFIFQFTTLYTFSyaaTFTALPTLIAF---GSFL 1423
Cdd:pfam11833  126 SIYFLNRKEKKLGRAVLLTLGGLVvglllGSLLASLLPVDIVPLGGPWSPE---LLVSLFTFVLLwlvSSFL 194
 
Name Accession Description Interval E-value
CPP1-like pfam11833
Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and ...
 1360-1423 3.46e-03

Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and eukaryotes. The plant member, CHAPERONE-LIKE PROTEIN OF POR1 (CPP1), is an essential protein for chloroplast development, plays a role in the regulation of POR (light-dependent protochlorophyllide oxidoreductase) stability and function.


Pssm-ID: 432112  Cd Length: 194  Bit Score: 40.29  E-value: 3.46e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 575003697  1360 SLYNMIFRGVNFWKGLAIYLGALS-----GGAIGQMILSFIFQFTTLYTFSyaaTFTALPTLIAF---GSFL 1423
Cdd:pfam11833  126 SIYFLNRKEKKLGRAVLLTLGGLVvglllGSLLASLLPVDIVPLGGPWSPE---LLVSLFTFVLLwlvSSFL 194
 
Name Accession Description Interval E-value
CPP1-like pfam11833
Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and ...
 1360-1423 3.46e-03

Protein CHAPERONE-LIKE PROTEIN OF POR1-like; This entry includes proteins from bacteria and eukaryotes. The plant member, CHAPERONE-LIKE PROTEIN OF POR1 (CPP1), is an essential protein for chloroplast development, plays a role in the regulation of POR (light-dependent protochlorophyllide oxidoreductase) stability and function.


Pssm-ID: 432112  Cd Length: 194  Bit Score: 40.29  E-value: 3.46e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 575003697  1360 SLYNMIFRGVNFWKGLAIYLGALS-----GGAIGQMILSFIFQFTTLYTFSyaaTFTALPTLIAF---GSFL 1423
Cdd:pfam11833  126 SIYFLNRKEKKLGRAVLLTLGGLVvglllGSLLASLLPVDIVPLGGPWSPE---LLVSLFTFVLLwlvSSFL 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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