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Conserved domains on  [gi|575003696|gb|ETW64105|]
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hypothetical protein PFMC_00129 [Plasmodium falciparum CAMP/Malaysia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Plasmod_dom_1 super family cl09916
Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an ...
 6-113 1.26e-45

Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an uncharacterized family consisting of a small number of hypothetical proteins of the malaria parasite Plasmodium falciparum (isolate 3D7).


The actual alignment was detected with superfamily member PTZ00163:

Pssm-ID: 415801 [Multi-domain]  Cd Length: 230  Bit Score: 147.17  E-value: 1.26e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 575003696   6 KHHNSLEDSIKEYYASTEPSVDDENKSFFKKIKLIMNILDDTHSDLLVNNHITNGGIFSPEFVPIGVLSSMTAACPLIGT 85
Cdd:PTZ00163 120 EHHNSLEDRIKEYYTLTDPSDGEENNSFFKKLKLIMNILDEVHSDLLINNSVTDGSIFSPELVPISVLSTMTLACPPIGT 199

                         90       100
                 ....*....|....*....|....*...
gi 575003696  86 VTLPYIARTINFMTKYKGEKIYTEQKSK 113
Cdd:PTZ00163 200 VTLPYITNRINFLNRYEGQNIHTEHDLK 227
 
Name Accession Description Interval E-value
PTZ00163 PTZ00163
hypothetical protein; Provisional
 6-113 1.26e-45

hypothetical protein; Provisional


Pssm-ID: 185490 [Multi-domain]  Cd Length: 230  Bit Score: 147.17  E-value: 1.26e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 575003696   6 KHHNSLEDSIKEYYASTEPSVDDENKSFFKKIKLIMNILDDTHSDLLVNNHITNGGIFSPEFVPIGVLSSMTAACPLIGT 85
Cdd:PTZ00163 120 EHHNSLEDRIKEYYTLTDPSDGEENNSFFKKLKLIMNILDEVHSDLLINNSVTDGSIFSPELVPISVLSTMTLACPPIGT 199

                         90       100
                 ....*....|....*....|....*...
gi 575003696  86 VTLPYIARTINFMTKYKGEKIYTEQKSK 113
Cdd:PTZ00163 200 VTLPYITNRINFLNRYEGQNIHTEHDLK 227
Plasmod_dom_1 pfam09715
Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an ...
 32-98 5.98e-29

Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an uncharacterized family consisting of a small number of hypothetical proteins of the malaria parasite Plasmodium falciparum (isolate 3D7).


Pssm-ID: 401596  Cd Length: 66  Bit Score: 99.44  E-value: 5.98e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 575003696   32 SFFKKIKLIMNILDDTHSDLLVNNHITNGGIFSPEFVpIGVLSSMTAACPLIGTVTLPYIARTINFM 98
Cdd:pfam09715   1 SFFKKIKLVMNAFDDLFIDKLIDNHITNKTSESPEIV-IEVLSAMTLACPPIGTVTFPYIVDRINFF 66
plasmod_dom_1 TIGR01519
Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain ...
 32-101 5.59e-14

Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain present in roughly eight hypothetical proteins of the malaria parasite Plasmodium falciparum.


Pssm-ID: 130582  Cd Length: 70  Bit Score: 61.33  E-value: 5.59e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 575003696   32 SFFKKIKLIMNILDDTHSDLLVNNHITNGG-IFSPEFVPIGVLssMTAAC-PLIGTVTLPYIARTINFMTKY 101
Cdd:TIGR01519   1 SFFKRALLLMNIFDNIFIDKLIDNNVHNKGsIISEDVVPNSLL--LSKALtPLTAIPILSYITKRINFLNKY 70
 
Name Accession Description Interval E-value
PTZ00163 PTZ00163
hypothetical protein; Provisional
 6-113 1.26e-45

hypothetical protein; Provisional


Pssm-ID: 185490 [Multi-domain]  Cd Length: 230  Bit Score: 147.17  E-value: 1.26e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 575003696   6 KHHNSLEDSIKEYYASTEPSVDDENKSFFKKIKLIMNILDDTHSDLLVNNHITNGGIFSPEFVPIGVLSSMTAACPLIGT 85
Cdd:PTZ00163 120 EHHNSLEDRIKEYYTLTDPSDGEENNSFFKKLKLIMNILDEVHSDLLINNSVTDGSIFSPELVPISVLSTMTLACPPIGT 199

                         90       100
                 ....*....|....*....|....*...
gi 575003696  86 VTLPYIARTINFMTKYKGEKIYTEQKSK 113
Cdd:PTZ00163 200 VTLPYITNRINFLNRYEGQNIHTEHDLK 227
Plasmod_dom_1 pfam09715
Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an ...
 32-98 5.98e-29

Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an uncharacterized family consisting of a small number of hypothetical proteins of the malaria parasite Plasmodium falciparum (isolate 3D7).


Pssm-ID: 401596  Cd Length: 66  Bit Score: 99.44  E-value: 5.98e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 575003696   32 SFFKKIKLIMNILDDTHSDLLVNNHITNGGIFSPEFVpIGVLSSMTAACPLIGTVTLPYIARTINFM 98
Cdd:pfam09715   1 SFFKKIKLVMNAFDDLFIDKLIDNHITNKTSESPEIV-IEVLSAMTLACPPIGTVTFPYIVDRINFF 66
plasmod_dom_1 TIGR01519
Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain ...
 32-101 5.59e-14

Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain present in roughly eight hypothetical proteins of the malaria parasite Plasmodium falciparum.


Pssm-ID: 130582  Cd Length: 70  Bit Score: 61.33  E-value: 5.59e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 575003696   32 SFFKKIKLIMNILDDTHSDLLVNNHITNGG-IFSPEFVPIGVLssMTAAC-PLIGTVTLPYIARTINFMTKY 101
Cdd:TIGR01519   1 SFFKRALLLMNIFDNIFIDKLIDNNVHNKGsIISEDVVPNSLL--LSKALtPLTAIPILSYITKRINFLNKY 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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