NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|574971221|gb|ETW33511|]
View 

hypothetical protein PFTANZ_05759 [Plasmodium falciparum Tanzania (2000708)]

Protein Classification

plasmod_dom_1 family protein( domain architecture ID 10019274)

plasmod_dom_1 family protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
plasmod_dom_1 TIGR01519
Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain ...
 112-181 7.26e-31

Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain present in roughly eight hypothetical proteins of the malaria parasite Plasmodium falciparum.


:

Pssm-ID: 130582  Cd Length: 70  Bit Score: 106.79  E-value: 7.26e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574971221  112 PFFKRALYLMDCFDNIYIDKLIDQNVHNKSSPIAQHVTENSVFLSHACSIFTAIPIITYIVKRFDYLERY 181
Cdd:TIGR01519   1 SFFKRALLLMNIFDNIFIDKLIDNNVHNKGSIISEDVVPNSLLLSKALTPLTAIPILSYITKRINFLNKY 70
 
Name Accession Description Interval E-value
plasmod_dom_1 TIGR01519
Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain ...
 112-181 7.26e-31

Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain present in roughly eight hypothetical proteins of the malaria parasite Plasmodium falciparum.


Pssm-ID: 130582  Cd Length: 70  Bit Score: 106.79  E-value: 7.26e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574971221  112 PFFKRALYLMDCFDNIYIDKLIDQNVHNKSSPIAQHVTENSVFLSHACSIFTAIPIITYIVKRFDYLERY 181
Cdd:TIGR01519   1 SFFKRALLLMNIFDNIFIDKLIDNNVHNKGSIISEDVVPNSLLLSKALTPLTAIPILSYITKRINFLNKY 70
Plasmod_dom_1 pfam09715
Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an ...
 113-178 4.60e-10

Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an uncharacterized family consisting of a small number of hypothetical proteins of the malaria parasite Plasmodium falciparum (isolate 3D7).


Pssm-ID: 401596  Cd Length: 66  Bit Score: 53.22  E-value: 4.60e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 574971221  113 FFKRALYLMDCFDNIYIDKLIDQNVHNKSSPIAQHVTENSVFLSHACSIFtAIPIITYIVKRFDYL 178
Cdd:pfam09715   2 FFKKIKLVMNAFDDLFIDKLIDNHITNKTSESPEIVIEVLSAMTLACPPI-GTVTFPYIVDRINFF 66
 
Name Accession Description Interval E-value
plasmod_dom_1 TIGR01519
Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain ...
 112-181 7.26e-31

Plasmodium falciparum uncharacterized domain; This model represents an uncharacterized domain present in roughly eight hypothetical proteins of the malaria parasite Plasmodium falciparum.


Pssm-ID: 130582  Cd Length: 70  Bit Score: 106.79  E-value: 7.26e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 574971221  112 PFFKRALYLMDCFDNIYIDKLIDQNVHNKSSPIAQHVTENSVFLSHACSIFTAIPIITYIVKRFDYLERY 181
Cdd:TIGR01519   1 SFFKRALLLMNIFDNIFIDKLIDNNVHNKGSIISEDVVPNSLLLSKALTPLTAIPILSYITKRINFLNKY 70
Plasmod_dom_1 pfam09715
Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an ...
 113-178 4.60e-10

Plasmodium protein of unknown function (Plasmod_dom_1); These sequences represent an uncharacterized family consisting of a small number of hypothetical proteins of the malaria parasite Plasmodium falciparum (isolate 3D7).


Pssm-ID: 401596  Cd Length: 66  Bit Score: 53.22  E-value: 4.60e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 574971221  113 FFKRALYLMDCFDNIYIDKLIDQNVHNKSSPIAQHVTENSVFLSHACSIFtAIPIITYIVKRFDYL 178
Cdd:pfam09715   2 FFKKIKLVMNAFDDLFIDKLIDNHITNKTSESPEIVIEVLSAMTLACPPI-GTVTFPYIVDRINFF 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH