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Conserved domains on  [gi|572187146|gb|AHF51332|]
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WciN [Streptococcus pneumoniae]

Protein Classification

glycosyltransferase family 8 protein( domain architecture ID 10135893)

glycosyltransferase family 8 protein similar to Neisseria meningitidis galactosyltransferase LgtC, which catalyzes a key step in the biosynthesis of lipooligosaccharide structure by transferring alpha-D-galactose from UDP-galactose to a terminal lactose

CAZY:  GT8
EC:  2.-.-.-
Gene Ontology:  GO:0016757
PubMed:  12691742|9445404
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
1-255 2.61e-68

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


:

Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 213.23  E-value: 2.61e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFaQREINWIeNVEIPFKLHL----DR 76
Cdd:cd04194    1 MNIVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKY-NSSIEFI-KIDNDDFKFFpattDH 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  77 GSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFN---KEYKQVLGIPIDKPMFNTGVM 153
Cdd:cd04194   79 ISYATYYRLLIPDLLPD-YDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIeqeKKRKRRLGGYDDGSYFNSGVL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 154 LINLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYNSFGVLPPEYNYMTIFEDLTYEEMIvfkkpinyySKEEIK 233
Cdd:cd04194  158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSK---------EEQELE 228
                        250       260
                 ....*....|....*....|..
gi 572187146 234 NARERIVLRHFTTsflSKRPWQ 255
Cdd:cd04194  229 EARKNPVIIHYTG---SDKPWN 247
 
Name Accession Description Interval E-value
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
1-255 2.61e-68

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 213.23  E-value: 2.61e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFaQREINWIeNVEIPFKLHL----DR 76
Cdd:cd04194    1 MNIVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKY-NSSIEFI-KIDNDDFKFFpattDH 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  77 GSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFN---KEYKQVLGIPIDKPMFNTGVM 153
Cdd:cd04194   79 ISYATYYRLLIPDLLPD-YDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIeqeKKRKRRLGGYDDGSYFNSGVL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 154 LINLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYNSFGVLPPEYNYMTIFEDLTYEEMIvfkkpinyySKEEIK 233
Cdd:cd04194  158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSK---------EEQELE 228
                        250       260
                 ....*....|....*....|..
gi 572187146 234 NARERIVLRHFTTsflSKRPWQ 255
Cdd:cd04194  229 EARKNPVIIHYTG---SDKPWN 247
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
1-273 4.76e-64

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 204.05  E-value: 4.76e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFaQREINWIENVEIPFK-LHL-DRGS 78
Cdd:COG1442    6 INIVFAIDDNYLPGLGVSIASLLENNPDRPYDFHILTDGLSDENKERLEALAAKY-NVSIEFIDVDDELLKdLPVsKHIS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  79 ISSFSRLFLGSVLPSSMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDT----FNKEYKQVLGIPIDKPMFNTGVML 154
Cdd:COG1442   85 KATYYRLLIPELLPDDYDKVLYLDADTLVLGDLSELWDIDLGGNLLAAVRDGtvtgSQKKRAKRLGLPDDDGYFNSGVLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 155 INLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYNSFGVLPPEYNYMTIFEDLTYEEMivfkkpinyySKEEIKN 234
Cdd:COG1442  165 INLKKWREENITEKALEFLKENPDKLKYPDQDILNIVLGGKVKFLPPRYNYQYSLYYELKDKS----------NKKELLE 234
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 572187146 235 ARERIVLRHFTTsflSKRPWQEGSNVAHIDQFKKYYEGS 273
Cdd:COG1442  235 ARKNPVIIHYTG---PTKPWHKWCTHPYADLYWEYLKKT 270
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
2-254 6.31e-34

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 124.74  E-value: 6.31e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146    2 NIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFAQRE------INWIENVEIPFKLHLD 75
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNNSDFALNFHIFTDDIPVENLDILNWLASSYKPVLpllesdIKIFEYFSKLKLRSPK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   76 RGSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVND-----TFNKEYKQVLGIPIDKP-MFN 149
Cdd:pfam01501  81 YWSLLNYLRLYLPDLFPK-LDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVEDnyfqrYPNFSEPIILENFGPPAcYFN 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  150 TGVMLINLELWRNNNVEERfLQVIQKFNGTILQ---GDLGVLNAVLYNSFGVLPPEYNYMTifedltyeemivfkkPINY 226
Cdd:pfam01501 160 AGMLLFDLDAWRKENITER-YIKWLNLNENRTLwklGDQDPLNIVFYGKVKPLDPRWNVLG---------------LGYY 223
                         250       260
                  ....*....|....*....|....*...
gi 572187146  227 YSKEEIKNARERIVLRHFTTSFlskRPW 254
Cdd:pfam01501 224 NKKKSLNEITENAAVIHYNGPT---KPW 248
PRK15171 PRK15171
lipopolysaccharide 3-alpha-galactosyltransferase;
1-225 2.05e-15

lipopolysaccharide 3-alpha-galactosyltransferase;


Pssm-ID: 185093 [Multi-domain]  Cd Length: 334  Bit Score: 75.56  E-value: 2.05e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFAQREINWIENVEIPFKLHLDRG-SI 79
Cdd:PRK15171  26 LDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSLPSTKNwTY 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  80 SSFSRLFLGSVLPSSMSKVLYLDSDIIVMDSLRSIFDIDF-KGKILYGVND---TFNKEYKQVLGIP-IDKPMFNTGVML 154
Cdd:PRK15171 106 ATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFaENEIAAVVAEgdaEWWSKRAQSLQTPgLASGYFNSGFLL 185
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 572187146 155 INLELWRNNNVEERFLQVIQ--KFNGTILQGDLGVLNAVLYNSFGVLPPEYNymTIFEdLTYEEMIVFKKPIN 225
Cdd:PRK15171 186 INIPAWAQENISAKAIEMLAdpEIVSRITHLDQDVLNILLAGKVKFIDAKYN--TQFS-LNYELKDSVINPVN 255
 
Name Accession Description Interval E-value
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
1-255 2.61e-68

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 213.23  E-value: 2.61e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFaQREINWIeNVEIPFKLHL----DR 76
Cdd:cd04194    1 MNIVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKY-NSSIEFI-KIDNDDFKFFpattDH 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  77 GSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFN---KEYKQVLGIPIDKPMFNTGVM 153
Cdd:cd04194   79 ISYATYYRLLIPDLLPD-YDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIeqeKKRKRRLGGYDDGSYFNSGVL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 154 LINLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYNSFGVLPPEYNYMTIFEDLTYEEMIvfkkpinyySKEEIK 233
Cdd:cd04194  158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSK---------EEQELE 228
                        250       260
                 ....*....|....*....|..
gi 572187146 234 NARERIVLRHFTTsflSKRPWQ 255
Cdd:cd04194  229 EARKNPVIIHYTG---SDKPWN 247
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
1-273 4.76e-64

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 204.05  E-value: 4.76e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFaQREINWIENVEIPFK-LHL-DRGS 78
Cdd:COG1442    6 INIVFAIDDNYLPGLGVSIASLLENNPDRPYDFHILTDGLSDENKERLEALAAKY-NVSIEFIDVDDELLKdLPVsKHIS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  79 ISSFSRLFLGSVLPSSMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDT----FNKEYKQVLGIPIDKPMFNTGVML 154
Cdd:COG1442   85 KATYYRLLIPELLPDDYDKVLYLDADTLVLGDLSELWDIDLGGNLLAAVRDGtvtgSQKKRAKRLGLPDDDGYFNSGVLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 155 INLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYNSFGVLPPEYNYMTIFEDLTYEEMivfkkpinyySKEEIKN 234
Cdd:COG1442  165 INLKKWREENITEKALEFLKENPDKLKYPDQDILNIVLGGKVKFLPPRYNYQYSLYYELKDKS----------NKKELLE 234
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 572187146 235 ARERIVLRHFTTsflSKRPWQEGSNVAHIDQFKKYYEGS 273
Cdd:COG1442  235 ARKNPVIIHYTG---PTKPWHKWCTHPYADLYWEYLKKT 270
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
2-254 6.31e-34

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 124.74  E-value: 6.31e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146    2 NIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFAQRE------INWIENVEIPFKLHLD 75
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNNSDFALNFHIFTDDIPVENLDILNWLASSYKPVLpllesdIKIFEYFSKLKLRSPK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   76 RGSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVND-----TFNKEYKQVLGIPIDKP-MFN 149
Cdd:pfam01501  81 YWSLLNYLRLYLPDLFPK-LDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVEDnyfqrYPNFSEPIILENFGPPAcYFN 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  150 TGVMLINLELWRNNNVEERfLQVIQKFNGTILQ---GDLGVLNAVLYNSFGVLPPEYNYMTifedltyeemivfkkPINY 226
Cdd:pfam01501 160 AGMLLFDLDAWRKENITER-YIKWLNLNENRTLwklGDQDPLNIVFYGKVKPLDPRWNVLG---------------LGYY 223
                         250       260
                  ....*....|....*....|....*...
gi 572187146  227 YSKEEIKNARERIVLRHFTTSFlskRPW 254
Cdd:pfam01501 224 NKKKSLNEITENAAVIHYNGPT---KPW 248
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
1-224 5.09e-20

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 87.11  E-value: 5.09e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIV-YATDNNFVDVLSASIKSLY--TTNSdldLNLWIIADKVSDRNKEKINRLSKQFAQR----EINWIENVEIPFKLH 73
Cdd:cd00505    1 IAIViVATGDEYLRGAIVLMKSVLrhRTKP---LRFHVLTNPLSDTFKAALDNLRKLYNFNyeliPVDILDSVDSEHLKR 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  74 LDrgSISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTF----NKEYKQVLGIPIDKPMFN 149
Cdd:cd00505   78 PI--KIVTLTKLHLPNLVPD-YDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGdrreGKYYRQKRSHLAGPDYFN 154
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 572187146 150 TGVMLINLELWRNNNVEERFLQVIQKFNGTILQGDLGVLNAVLYN---SFGVLPPEYNYMTIFEDLTYEEMIVFKKPI 224
Cdd:cd00505  155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQvpfIVKSLPCIWNVRLTGCYRSLNCFKAFVKNA 232
PRK15171 PRK15171
lipopolysaccharide 3-alpha-galactosyltransferase;
1-225 2.05e-15

lipopolysaccharide 3-alpha-galactosyltransferase;


Pssm-ID: 185093 [Multi-domain]  Cd Length: 334  Bit Score: 75.56  E-value: 2.05e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146   1 MNIVYATDNNFVDVLSASIKSLYTTNSDLDLNLWIIADKVSDRNKEKINRLSKQFAQREINWIENVEIPFKLHLDRG-SI 79
Cdd:PRK15171  26 LDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSLPSTKNwTY 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  80 SSFSRLFLGSVLPSSMSKVLYLDSDIIVMDSLRSIFDIDF-KGKILYGVND---TFNKEYKQVLGIP-IDKPMFNTGVML 154
Cdd:PRK15171 106 ATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFaENEIAAVVAEgdaEWWSKRAQSLQTPgLASGYFNSGFLL 185
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 572187146 155 INLELWRNNNVEERFLQVIQ--KFNGTILQGDLGVLNAVLYNSFGVLPPEYNymTIFEdLTYEEMIVFKKPIN 225
Cdd:PRK15171 186 INIPAWAQENISAKAIEMLAdpEIVSRITHLDQDVLNILLAGKVKFIDAKYN--TQFS-LNYELKDSVINPVN 255
GT8_like_1 cd06429
GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of ...
78-275 4.36e-09

GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133051 [Multi-domain]  Cd Length: 257  Bit Score: 56.24  E-value: 4.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  78 SISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFNKeykqvlgipidkpmfntGVMLINL 157
Cdd:cd06429   98 SLLNFARFYLPELFPK-LEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVETSWNP-----------------GVNVVNL 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 158 ELWRNNNVEERFLQVIQKFngtilqgdlgVLNAVLYNSFGVLPPeynYMTIFEDLTYeemivfkkPIN------------ 225
Cdd:cd06429  160 TEWRRQNVTETYEKWMELN----------QEEEVTLWKLITLPP---GLIVFYGLTS--------PLDpswhvrglgyny 218
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 572187146 226 YYSKEEIKNAreriVLRHFTTSFlskRPWQEGSnvahIDQFKKYYEGSYK 275
Cdd:cd06429  219 GIRPQDIKAA----AVLHFNGNM---KPWLRTA----IPSYKELWEKYLS 257
PLN02659 PLN02659
Probable galacturonosyltransferase
78-201 1.44e-06

Probable galacturonosyltransferase


Pssm-ID: 215356 [Multi-domain]  Cd Length: 534  Bit Score: 49.64  E-value: 1.44e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  78 SISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGV-----NDTF--NKEYKQVLGI--PIDKPMF 148
Cdd:PLN02659 328 SVMNHIRIHLPELFPS-LNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVetcrgEDKFvmSKKLKSYLNFshPLIAKNF 406
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 149 NT-------GVMLINLELWRNNNVEERFLQVIQKFngtiLQGDLGVLNavlynsFGVLPP 201
Cdd:PLN02659 407 DPnecawayGMNIFDLEAWRKTNISSTYHHWLEEN----LKSDLSLWQ------LGTLPP 456
PLN02769 PLN02769
Probable galacturonosyltransferase
63-176 1.84e-06

Probable galacturonosyltransferase


Pssm-ID: 215412 [Multi-domain]  Cd Length: 629  Bit Score: 49.31  E-value: 1.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  63 IENVEIPFKLHLDRGSISSFSR-LFLGSVLPSSMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFNK--EYKQVL 139
Cdd:PLN02769 419 FRSVDNPSSKQMRTEYLSVFSHsHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRlgQLKNYL 498
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 572187146 140 GipidKPMFNT-------GVMLINLELWRNNNVEERFLQVIQKF 176
Cdd:PLN02769 499 G----DTNFDTnscawmsGLNVIDLDKWRELDVTETYLKLLQKF 538
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
14-271 1.51e-05

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 45.33  E-value: 1.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  14 VLSASIKSlytTNSDLDLNLwIIADKVSdrnKEKINRLSKQFAQ-REINWIENVEIPFKLHLDRGSISsFSRLFLGSVlp 92
Cdd:cd02537   18 VLGYSLRK---VGSSYDLVV-LVTPGVS---EESREALEEVGWIvREVEPIDPPDSANLLKRPRFKDT-YTKLRLWNL-- 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  93 SSMSKVLYLDSDIIVMDSLRSIFDIDFKgkiLYGVNDtfnkeykqvlgipIDKP-MFNTGVMLI--NLELWrnnNVEERF 169
Cdd:cd02537   88 TEYDKVVFLDADTLVLRNIDELFDLPGE---FAAAPD-------------CGWPdLFNSGVFVLkpSEETF---NDLLDA 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 170 LQVIQKFNGtilqGDLGVLNAVlYNSFGV---LPPEYNYMtifedltyeemivfkkPINYYSKEEIKNARERIVLRHFTt 246
Cdd:cd02537  149 LQDTPSFDG----GDQGLLNSY-FSDRGIwkrLPFTYNAL----------------KPLRYLHPEALWFGDEIKVVHFI- 206
                        250       260
                 ....*....|....*....|....*..
gi 572187146 247 sfLSKRPWQ--EGSNVAHIDQFKKYYE 271
Cdd:cd02537  207 --GGDKPWSwwRDPETKEKDDYNELHQ 231
GT8_LARGE_C cd06431
LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in ...
83-205 1.86e-04

LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis; The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil motif, and two putative catalytic domains. This catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis.


Pssm-ID: 133053  Cd Length: 280  Bit Score: 42.46  E-value: 1.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  83 SRLFLGSVLPSSMSKVLYLDSDIIVmdsLRSIFDidfkgkiLYGVNDTFNKeyKQVLGI-------------------PI 143
Cdd:cd06431   86 MKLVLTEALPSDLEKVIVLDTDITF---ATDIAE-------LWKIFHKFTG--QQVLGLvenqsdwylgnlwknhrpwPA 153
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 572187146 144 DKPMFNTGVMLINLELWRNNNVEERFLQVIQKFNGTILQ---GDLGVLNAVLYNS-FGV--LPPEYNY 205
Cdd:cd06431  154 LGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLStslADQDIFNAVIKQNpFLVyqLPCAWNV 221
PLN02870 PLN02870
Probable galacturonosyltransferase
84-256 8.42e-04

Probable galacturonosyltransferase


Pssm-ID: 215468 [Multi-domain]  Cd Length: 533  Bit Score: 40.69  E-value: 8.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  84 RLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVN-----DTF--NKEYKQVLGI--PI-------DKPM 147
Cdd:PLN02870 333 RIYLPELFPN-LDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVEtcrgeDEWvmSKRFRNYFNFshPLiaknldpEECA 411
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146 148 FNTGVMLINLELWRNNNVEERFLQVIQ---KFNGTILQgdlgvlnavlynsFGVLPPeynymtifedltyeEMIVFK--- 221
Cdd:PLN02870 412 WAYGMNIFDLRAWRKTNIRETYHSWLKenlKSNLTMWK-------------LGTLPP--------------ALIAFKghv 464
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 572187146 222 KPIN---------YYSKEEIKNARERIVLRHFTTSflskRPWQE 256
Cdd:PLN02870 465 HPIDpswhmlglgYQSKTNIESVKKAAVIHYNGQS----KPWLE 504
PLN02742 PLN02742
Probable galacturonosyltransferase
84-201 9.27e-04

Probable galacturonosyltransferase


Pssm-ID: 215395 [Multi-domain]  Cd Length: 534  Bit Score: 40.91  E-value: 9.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  84 RLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVN---DTFNKEYKQV-LGIPIDKPMFNT-------GV 152
Cdd:PLN02742 343 RFYIPEIYPA-LEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVEtclETFHRYHKYLnFSHPLISSHFDPdacgwafGM 421
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 572187146 153 MLINLELWRNNNVEERFlQVIQKFNGTILQGDLGVLNAVLYNSFGVLPP 201
Cdd:PLN02742 422 NVFDLVAWRKANVTAIY-HYWQEQNVDRTLWKLGTLPPGLLTFYGLTEP 469
PLN02867 PLN02867
Probable galacturonosyltransferase
84-169 1.64e-03

Probable galacturonosyltransferase


Pssm-ID: 178458 [Multi-domain]  Cd Length: 535  Bit Score: 39.89  E-value: 1.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  84 RLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTF-------NKEYKQVLGI--PI-------DKPM 147
Cdd:PLN02867 335 RIYIPELFPD-LNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWcgdnccpGRKYKDYLNFshPLissnldqERCA 413
                         90       100
                 ....*....|....*....|..
gi 572187146 148 FNTGVMLINLELWRNNNVEERF 169
Cdd:PLN02867 414 WLYGMNVFDLKAWRRTNITEAY 435
PLN02829 PLN02829
Probable galacturonosyltransferase
78-123 2.72e-03

Probable galacturonosyltransferase


Pssm-ID: 215443 [Multi-domain]  Cd Length: 639  Bit Score: 39.45  E-value: 2.72e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 572187146  78 SISSFSRLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKI 123
Cdd:PLN02829 441 SILNHLRFYLPEIFPK-LNKVLFLDDDIVVQKDLTGLWSIDLKGNV 485
PLN02523 PLN02523
galacturonosyltransferase
84-169 5.68e-03

galacturonosyltransferase


Pssm-ID: 215286 [Multi-domain]  Cd Length: 559  Bit Score: 38.32  E-value: 5.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 572187146  84 RLFLGSVLPSsMSKVLYLDSDIIVMDSLRSIFDIDFKGKILYGVNDTFNK--EYKQVLGI--PIDKPMFNT-------GV 152
Cdd:PLN02523 367 RFYLPEMYPK-LHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSfhRYAQYLNFshPLIKEKFNPkacawayGM 445
                         90
                 ....*....|....*..
gi 572187146 153 MLINLELWRNNNVEERF 169
Cdd:PLN02523 446 NIFDLDAWRREKCTEQY 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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