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Conserved domains on  [gi|571435322|ref|XP_006573444|]
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growth-regulating factor 9 isoform X1 [Glycine max]

Protein Classification

WRC domain-containing protein( domain architecture ID 10556152)

WRC domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 133-174 4.26e-21

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


:

Pssm-ID: 462621  Cd Length: 42  Bit Score: 85.78  E-value: 4.26e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 571435322  133 PEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPV 174
Cdd:pfam08879   1 PEPGRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 353-391 4.51e-16

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


:

Pssm-ID: 462621  Cd Length: 42  Bit Score: 71.52  E-value: 4.51e-16
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 571435322  353 GRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSH 391
Cdd:pfam08879   4 GRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
 
Name Accession Description Interval E-value
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 133-174 4.26e-21

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


Pssm-ID: 462621  Cd Length: 42  Bit Score: 85.78  E-value: 4.26e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 571435322  133 PEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPV 174
Cdd:pfam08879   1 PEPGRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 353-391 4.51e-16

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


Pssm-ID: 462621  Cd Length: 42  Bit Score: 71.52  E-value: 4.51e-16
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 571435322  353 GRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSH 391
Cdd:pfam08879   4 GRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
 
Name Accession Description Interval E-value
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 133-174 4.26e-21

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


Pssm-ID: 462621  Cd Length: 42  Bit Score: 85.78  E-value: 4.26e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 571435322  133 PEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPV 174
Cdd:pfam08879   1 PEPGRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
WRC pfam08879
WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive ...
 353-391 4.51e-16

WRC; The WRC domain, named after the conserved Trp-Arg-Cys motif, contains two distinctive features: a putative nuclear localization signal and a zinc-finger motif (C3H). It is suggested that the WRC domain functions in DNA binding.


Pssm-ID: 462621  Cd Length: 42  Bit Score: 71.52  E-value: 4.51e-16
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 571435322  353 GRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSH 391
Cdd:pfam08879   4 GRCRRTDGKKWRCSRRVLPGQKLCERHMHRGRKRSNKSK 42
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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