|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-289 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 634.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSIL 80
Cdd:CHL00025 20 MLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLIL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:CHL00025 100 ITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:CHL00025 180 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 571332137 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:CHL00025 260 ISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATL 308
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-289 |
1.95e-134 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 395.55 E-value: 1.95e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSIL 80
Cdd:PRK07376 20 VLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:PRK07376 100 VTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:PRK07376 180 VVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTP 259
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 571332137 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:PRK07376 260 ISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASI 308
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
26-288 |
3.52e-104 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 316.33 E-value: 3.52e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 26 VLLLSIVMLFSIYLSIQQINSS--SFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYL 103
Cdd:PRK06590 36 TGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 104 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 183
Cdd:PRK06590 116 RFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 184 FEFRdlfEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP 263
Cdd:PRK06590 196 LNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSP 272
|
250 260
....*....|....*....|....*
gi 571332137 264 LFRVIPYIMYFISVIGIITVFLGAT 288
Cdd:PRK06590 273 LFELSPEALLFVAIVGAVTALFAAF 297
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
2-289 |
3.06e-103 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 313.24 E-value: 3.06e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFptATKSFRRMWAFqsvLLLSIVMLFSIYLSIQ---QINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMS 78
Cdd:COG1009 12 LLGALLAGL--LGRRLGRRAAG---WLAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 79 ILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQK 158
Cdd:COG1009 87 LLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 159 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGP 238
Cdd:COG1009 167 AFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGP 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 571332137 239 TPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:COG1009 242 TPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALI 292
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-289 |
1.06e-90 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 281.09 E-value: 1.06e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAgLILFPTATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSS---FYQYVWSWIINNDFSLEFGYLIDPLTSIMS 78
Cdd:TIGR01974 11 LIGF-LIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTML 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 79 ILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQK 158
Cdd:TIGR01974 90 VVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIK 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 159 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNnevnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGP 238
Cdd:TIGR01974 170 AFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGP 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 571332137 239 TPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:TIGR01974 244 TPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATV 294
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
44-288 |
7.10e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 224.50 E-value: 7.10e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 44 INSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSS 123
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEvn 203
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKES-- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 204 flfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITV 283
Cdd:MTH00210 210 ---LTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
....*
gi 571332137 284 FLGAT 288
Cdd:MTH00210 287 FFAAT 291
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
25-289 |
9.80e-67 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 218.79 E-value: 9.80e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 25 SVLLLSIVMLFSIYLSIQqINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLR 104
Cdd:MTH00020 34 SCLIISLSWSFLIFYEIL-FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 184
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 185 EFRDLFEIFNNLIYNNevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00020 193 DFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPL 266
|
250 260
....*....|....*....|....*
gi 571332137 265 FRVIPYIMYFISVIGIITVFLGATL 289
Cdd:MTH00020 267 FEQAPLALIIVTIVGSLTVFFAATV 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
44-289 |
3.78e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 180.92 E-value: 3.78e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 44 INSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSS 123
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 197
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 198 YNNEVNFL----FVTLcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMY 273
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250
....*....|....*.
gi 571332137 274 FISVIGIITVFLGATL 289
Cdd:MTH00032 291 IITIFGALTAFFAATV 306
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-288 |
1.06e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 173.21 E-value: 1.06e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMLFsIYLSiQQINSSSFYqyvWSWIINNDFSLEFGYLIDPLTSIMSIL 80
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL-IFLD-QGLETILTN---WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 571332137 241 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGAT 288
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGAL 284
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
8-286 |
1.14e-49 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 175.11 E-value: 1.14e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 8 ILFPTATKSFRRMWAFQSVLLLSIVmLFSIYLS-IQQINSSSFYQYVWSWIINndFSLEFGYLIDPLTSIMSILITTVGI 86
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVV-LFIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLYVDGLSLLFALLITGIGS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 87 MVLIYSDNYMAYDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 165
Cdd:PRK12645 93 LVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 166 GDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALI 245
Cdd:PRK12645 173 GGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 571332137 246 HAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLG 286
Cdd:PRK12645 248 HSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWG 288
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-289 |
2.16e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 174.34 E-value: 2.16e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 54 WSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 133
Cdd:PRK12647 48 YAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 134 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNNEvnflFVTLCAVL 213
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLL 200
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 214 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALL 276
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-286 |
5.30e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 173.96 E-value: 5.30e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 52 YVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 130
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 131 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfeifnnlIYNNEVNFLFVTLC 210
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVA 205
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 211 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLG 286
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLG 281
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
8-287 |
1.76e-47 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 169.26 E-value: 1.76e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 8 ILFPTATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIM 87
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 88 VLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGD 167
Cdd:TIGR00940 91 VVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 168 FGLLLGILGFYWITGSFEFRDLFEIFNNLIynNEVNFLFVTlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHA 247
Cdd:TIGR00940 171 LAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAM---VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHS 245
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 571332137 248 ATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:TIGR00940 246 ATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGS 285
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
21-287 |
1.38e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 161.51 E-value: 1.38e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 21 WAFQSVLLLSIVMLFSIYlsiQQINSSSFYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQ 100
Cdd:PRK12648 30 WLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPAD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 101 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWI 180
Cdd:PRK12648 105 PVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 181 TGSFefrDLFEIFNN--LIYNNEvnfLFV-TLCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL 257
Cdd:PRK12648 185 VGSY---DLDVVLAAgdLIRAHP---LYPpALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFL 256
|
250 260 270
....*....|....*....|....*....|
gi 571332137 258 VARLLPLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK12648 257 LARLWPVLAGTEEWFWIVGGAGLITLLLGA 286
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
54-265 |
5.75e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 151.98 E-value: 5.75e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 54 WSWIINNDFSLEFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIY 129
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 130 IFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFLFVTL 209
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLLGLI 214
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 210 CAvllfagAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 265
Cdd:MTH00066 215 LA------AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLL 264
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-289 |
2.32e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 151.91 E-value: 2.32e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 64 LEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 143
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 144 GFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifNNLIYNNEVNFLFVTLCAVLLFAGAVAKSA 223
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 224 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFL 295
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
27-289 |
3.23e-41 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 150.06 E-value: 3.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 27 LLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFF 106
Cdd:PRK07390 44 LLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 107 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 186
Cdd:PRK07390 124 ALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNF 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 187 RDLFEIFNnliyNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFR 266
Cdd:PRK07390 204 SDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLA 278
|
250 260
....*....|....*....|...
gi 571332137 267 VIPYIMYFISVIGIITVfLGATL 289
Cdd:PRK07390 279 LSPVALTVLIVIGTVTA-IGASL 300
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
7-287 |
2.28e-40 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 149.13 E-value: 2.28e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 7 LILFPTATKSFRRMWAFQSVLLLSIVMLFSIYlSIQQINSSSFYQYVWSWIINNDFSLEFgyLIDPLTSIMSILITTVGI 86
Cdd:PRK12646 16 MILLTSKRRALAKYAGYIALVAPIISSIYFLI-QIPSVAKLQYLSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 87 MVLIYSDNYMAYDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 165
Cdd:PRK12646 93 AVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 166 GDFGLLLGILGFYWITGSFEFRDLFEIFNNLiyNNEVNFLFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALI 245
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 571332137 246 HAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK12646 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGS 289
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
2-286 |
6.09e-40 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 144.73 E-value: 6.09e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFptatkSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNdfSLEFGYLIDPLTSIMSILI 81
Cdd:PRK06525 12 FIGALVVFF-----LPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD--VALFGLVIDPVSVLIGFVV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 82 TTVGIMVLIYSDNYMA-------YDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAAN 154
Cdd:PRK06525 85 VLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 155 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYnneVNFLFvtlcavLLFAgAVAKSAQFPLHVWLPDA 234
Cdd:PRK06525 164 SALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLG------ILFA-AWGKSAQLPFYSWLPDA 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 571332137 235 MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPY-IMYFISVIGIITVFLG 286
Cdd:PRK06525 234 MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHvIGYVGAVMAIVTLLYG 286
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
25-288 |
2.68e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 145.11 E-value: 2.68e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 25 SVLLLSIVMLFSIYLSIQQINSSSFYqyvwsWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLR 104
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINISLSN-----WLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 184
Cdd:MTH00208 140 FFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 185 efrDLFEIFnnliYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00208 220 ---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPL 292
|
250 260
....*....|....*....|....
gi 571332137 265 FRVIPYIMYFISVIGIITVFLGAT 288
Cdd:MTH00208 293 ISNSPWFLSLCLILGSLTALFAAS 316
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
31-265 |
1.03e-38 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 143.00 E-value: 1.03e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 31 IVMLFSIYLSIQQINSSsfyqyvWSWIINNDFSLEFGYLIDPLtSIMSI---LITTVGIMVliYSDNYMAYDQGYLRFFA 107
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 108 YMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 187
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 571332137 188 DLFeifnnliYNNEVNflfvTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 265
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLL 266
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
122-289 |
4.32e-38 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 135.90 E-value: 4.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 122 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNE 201
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 202 VNFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-RVIPYIMYFISVIG 279
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170
....*....|
gi 571332137 280 IITVFLGATL 289
Cdd:pfam00361 155 IISMLLGSLA 164
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
95-264 |
5.77e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 141.12 E-value: 5.77e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 95 YMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLllgI 174
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 175 LGFYWI---TGSFEFRDLFEIFNNLIynnevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 251
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKDFD---------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170
....*....|...
gi 571332137 252 AAGIFLVARLLPL 264
Cdd:MTH00137 259 VAGIFLLIRLSPL 271
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
20-264 |
7.47e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 135.37 E-value: 7.47e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 20 MWAFQSVLLLSIVML-FSIYLSIQQINSSSFY-QYV-----------------------------WSWIINNDFSLEFGY 68
Cdd:MTH00108 1 MNLFTSSTLLTLLILtLPIIMTLTNPYKTNNYpLYVkttisyafiisliptmmfihsgqemiisnWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 69 LIDpLTSIMSI---LITTVGIMVliYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 145
Cdd:MTH00108 81 KLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 146 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFlfvTLCAVLLfaGAVAKSAQF 225
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNL---PLMGLLL--AATGKSAQF 227
|
250 260 270
....*....|....*....|....*....|....*....
gi 571332137 226 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00108 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPL 266
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-287 |
4.84e-32 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 122.56 E-value: 4.84e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFPTATKSFRRMWAFQSVLLLSIVmlfSIYLSIQQINSSSFYQYVWSWIinndFSLEFGYLIDPLTSIMSILI 81
Cdd:COG0651 13 LLAAALLLLLGRRRRLQRALSLLASLALLAL---ALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSALFLLLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 82 TTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFV 161
Cdd:COG0651 86 ALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 162 TNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAM-EGPTP 240
Cdd:COG0651 165 LNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSP 238
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 571332137 241 ISALIHAAtMVAAGIFLVARLLPLF---RVIPYIMYFISVIGIITVFLGA 287
Cdd:COG0651 239 VSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGA 287
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
57-288 |
3.02e-30 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 119.76 E-value: 3.02e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 57 IINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVG 136
Cdd:PRK12650 64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 137 LCSYLLIGFwfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVTlcAVLLFA 216
Cdd:PRK12650 144 LASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAV 216
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 571332137 217 GAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGAT 288
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAV 288
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
23-285 |
1.92e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 108.31 E-value: 1.92e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 23 FQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGY 102
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWITG 182
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 183 SFEFRDLFEIFNNLIYNNEVNFLFVTlcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 262
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260
....*....|....*....|...
gi 571332137 263 PLFrVIPYIMYFISVIGIITVFL 285
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFM 256
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
26-282 |
3.32e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 104.73 E-value: 3.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 26 VLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRF 105
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 106 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYwitgsfe 185
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 186 frdLFEIFNNLIYNNEVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 265
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250
....*....|....*..
gi 571332137 266 RVIPYIMYFISVIGIIT 282
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLT 249
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
71-287 |
3.85e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 98.62 E-value: 3.85e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 71 DPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 150
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 151 VAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifnnlIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVW 230
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWA-----HLAAQGASPSLQAAALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 571332137 231 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAG 278
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
2-287 |
1.57e-22 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 96.69 E-value: 1.57e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILF-PTATKSFRRMWAFqsvLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSIL 80
Cdd:COG1008 14 LLGALLLLLlPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLPLVLL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqK 158
Cdd:COG1008 91 TALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAAI---K 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 159 AFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA-MEG 237
Cdd:COG1008 166 FFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF-----LAFFIAFAVKVPMFPFHTWLPDAhVEA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 571332137 238 PTPISAlIHAATMVAAGIFLVARL-LPLFrviP----YIMYFISVIGIITVFLGA 287
Cdd:COG1008 240 PTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGA 290
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
25-286 |
1.74e-19 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 87.98 E-value: 1.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 25 SVLLLSIVMLFSIYLSIQQINSSSfyqYVWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGY 102
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFYwITG 182
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 183 SFEFRDLFEifnnliynnevnFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 262
Cdd:MTH00151 163 HWSILSMWD------------FKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260
....*....|....*....|....
gi 571332137 263 PLFRVIPYIMYFISVIGIITVFLG 286
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMA 254
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
68-287 |
4.34e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 86.71 E-value: 4.34e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 146
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 147 FTRPVAANACQKAFVTnrvGDFG---LLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnfLFVTLCAVLLFAGAVAKSA 223
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLLLGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 571332137 224 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGN 284
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
7-263 |
1.12e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 85.59 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 7 LILFPTATKSFRRMWAFqsvlllsIVMLFSIYLSIQQINSSSFYQyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGI 86
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 87 MVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVG 166
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 167 DFGLLLGIlgfywitgSFEFRDLFEIFNNLIYNNEVNFlfVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALIH 246
Cdd:MTH00207 151 DVMLLLSI--------GWTLNQGHWSITNMWQTDMNNY--IALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVH 217
|
250
....*....|....*..
gi 571332137 247 AATMVAAGIFLVARLLP 263
Cdd:MTH00207 218 SSTLVTAGVFLLIRFYP 234
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-289 |
3.89e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 83.78 E-value: 3.89e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFPTATKSFRRMWAFqsvlLLSIVMLFSIYLSIQQINSSSFYQYV---WSWIInndfSLEFGylIDPLTSIMS 78
Cdd:PRK08375 14 LLAAALIVLLPKRRRLRWALAL----LVAALTFALAISLLPQVLDGGVIAYVvggWPPGI----GIELR--ADSLSALFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 79 ILITTVGIMVLIYSDNYMAYDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAANACQK 158
Cdd:PRK08375 84 LVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 159 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliynnEVNFLFVTLcAVLLFAGAVaKSAQFPLHVWLPDAMEGP 238
Cdd:PRK08375 161 YLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLPRAYPAA 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 239 TPISALIHAATMVAAGIFLVARLL-----PLFRVIPYIMYFISVIGIITVFLGATL 289
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLA 288
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-287 |
2.21e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 81.79 E-value: 2.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQyvwswiinndfslefGYLIDPLTSIMSIL 80
Cdd:PRK05777 17 LLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGG---------------MLVVDGFALFLKGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAyDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 160
Cdd:PRK05777 82 ILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnfLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PT 239
Cdd:PRK05777 161 VLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGaPT 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 571332137 240 PISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK05777 237 PVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGN 285
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
70-289 |
3.84e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 80.91 E-value: 3.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 70 IDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 149
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 150 PVAANACQKAFVTNRVGDFGLLLGILGFYwitGSFEFRDLFEIFNNLIYNnevNFLFVTLCAVLLFAGAVAKSAQFPLHV 229
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSEN---PTVVAKIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 571332137 230 WLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLFRV---IPYIMYFISVIGIITVFLGATL 289
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYGPainLATVGWVIIILGCLTMFVGVAM 304
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
25-288 |
6.80e-16 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 77.23 E-value: 6.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 25 SVLLLSIVMLFSIYLSIqqiNSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLR 104
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 105 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLgILGFYWITGSF 184
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 185 EFrdlfeifnnliynnevnflfvtLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 264
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYL 213
|
250 260
....*....|....*....|....
gi 571332137 265 FRVIPYImYFISVIGIITVFLGAT 288
Cdd:MTH00063 214 LGFSWLS-IFFSVLLLLTIFITGV 236
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-289 |
2.08e-15 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 76.01 E-value: 2.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFptATKSFRRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWS--WIINNDFSLEFGylIDPLTSIMSI 79
Cdd:PRK05846 14 LIGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKhpWIPRFGISYHLG--VDGISLLLVV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 80 LITTVGIMVLIYSDNYMAYDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacq 157
Cdd:PRK05846 90 LTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRIYAAT--- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 158 KAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFeifNNLIYNNEVNFLFVTLcavlLFAGAVaKSAQFPLHVWLPD 233
Cdd:PRK05846 165 KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF----FIAFAV-KMPMFPLHTWLPD 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 571332137 234 AMEGPTPISALIHAATMVAAGIF-LVARLLPLFRVIP-YIMYFISVIGIITVFLGATL 289
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALV 294
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
62-286 |
3.04e-15 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 75.34 E-value: 3.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 62 FSLEFGYLIDPLtsIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYL 141
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 142 LIGFWFTrpvaANACQKA---FVTNRVGDFGLLLGILGFYWITGSFEfrdlfeifnnliynneVNFLFVTLCAVLLFAGA 218
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGFIFSSYYFF----------------SFSFFSSSMILMLLLTS 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 571332137 219 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMyFISVIGIITVFLG 286
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMK-IMLLIGLFTMFFS 241
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
2-287 |
1.11e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 73.82 E-value: 1.11e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFPTATKSFRRMWAFQSVLLLsiVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLTSIMSILI 81
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALA--TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 82 TTVGIMVLIYSDNYMAYDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFV 161
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 162 TNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVNFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDAM-EGPT 239
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLF-----LAFFIAFAVKVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 571332137 240 PISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYFISVIGIITVFLGA 287
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGA 284
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
55-289 |
5.79e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 71.57 E-value: 5.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 55 SWIINNDFSLEFGYLIdpLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 134
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 135 VGLCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlFEIFNNLIYNNEVNF-LFVTLcavL 213
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLINDTSTGFaLIVFL---F 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 214 LFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFRVIPYIMYFISVIGII 281
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNI 281
|
....*...
gi 571332137 282 TVFLGATL 289
Cdd:PRK08668 282 SIIVGTLM 289
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-287 |
7.02e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 71.54 E-value: 7.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNfLFVTLCAVLLFAGAVA------K 221
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGG-LAGNPPLALGVALALAlwaftiK 236
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 571332137 222 SAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL-PLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLyTIFGISPSLIDFRAALSPILIILGA 303
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-286 |
8.20e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 71.30 E-value: 8.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATK---SFRRMWAFQSVL-LLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEfgylIDPLTSI 76
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 77 MSILITTVGIMVLIYSDNYMAYDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAA 153
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 154 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPD 233
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 571332137 234 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGIITVFLG 286
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLG 284
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
23-287 |
2.82e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 69.59 E-value: 2.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 23 FQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLefgylidpltSIMSILITTVGIMVLIYSDNYMAYDQGY 102
Cdd:TIGR01770 32 LLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL----------LIKLILLLSTLLTFFFALSYLSKEKINK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 103 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITG 182
Cdd:TIGR01770 102 FEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 183 SFEFRDLFEIFNNLIYNNEvnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVAR 260
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLNIS----LLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLF 257
|
250 260
....*....|....*....|....*..
gi 571332137 261 LLPLFRVIPYIMYFISVIGIITVFLGA 287
Cdd:TIGR01770 258 LYILFGFSEAWQIFLAIIAFLSMLIGN 284
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
56-106 |
3.79e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 62.83 E-value: 3.79e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 571332137 56 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFF 106
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
69-286 |
1.15e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.67 E-value: 1.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 69 LIDPLTSIMSILITTVGIMVLIYSdnymaYDQGYLRFFAymsFFSTSMLGLV----TSSNLIQIYIFWELVGLCSYLLIG 144
Cdd:PRK07234 64 RADALSGYFILTNALVTLAVIFYC-----WESAKTRFFY---AQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVA 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 145 FWFTRPVAANACQKAFVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnflfVTLCAVLLFAGAVAKSAQ 224
Cdd:PRK07234 136 YPRTDRAIWVGLRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGI 200
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 571332137 225 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYImyfISVIGIITVFLG 286
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLG 259
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-262 |
1.17e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 67.53 E-value: 1.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 56 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMA--YDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 133
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAinNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 134 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEF--RDLFEIFNNLIynnevnflfvtlcA 211
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFvsGGLFSKNQSII-------------L 213
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 571332137 212 VLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 262
Cdd:PRK06589 214 LLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL 264
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
70-256 |
4.86e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.98 E-value: 4.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 70 IDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYL--RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKGpgAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfeifnnlIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPL 227
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190
....*....|....*....|....*....|
gi 571332137 228 HVWLPDAM-EGPTPISALIhAATMVAAGIF 256
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIY 258
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
70-283 |
1.11e-10 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 61.59 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 70 IDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 148 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeifNNLIYNNEVNF--LFVTLCAVLLFAGAVAKSAQF 225
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 571332137 226 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLF-----RVIPYIMYFISVI---GIITV 283
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFhddiaQILLLIFASISVLigtGISLV 286
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
69-244 |
2.93e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 60.33 E-value: 2.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 69 LIDPLTSIMSILITTVGIMVLIYSDNYMAYDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGLCSY 140
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 141 LLIGFWFTRpVAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNFLFVTLCAVLLFAGA 218
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
170 180
....*....|....*....|....*..
gi 571332137 219 VAKSAQFPLHVWLPDA-MEGPTPISAL 244
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSAL 251
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
61-281 |
1.06e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 49.51 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 61 DFSLEFgYLIDPLTSIMSILITTVGIMVLIYSdnymAYDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGLCSY 140
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTST 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 141 LLIgfWFTR-PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNnliynnevnflfvTLCAVLLFAGAV 219
Cdd:PRK12668 131 FLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFG 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 571332137 220 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYFISVIGII 281
Cdd:PRK12668 195 VNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYIGAAMAVYGVF 256
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
108-271 |
1.46e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 49.23 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 108 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgLLLG-----IL--GF 177
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------LLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 178 YWITG-SFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 255
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170
....*....|....*.
gi 571332137 256 FLVARLLPLfrVIPYI 271
Cdd:CHL00049 262 ALATRIFDI--PFYFS 275
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-287 |
1.93e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.79 E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 1 MLIGAGLILFPTATKSFRrmwaFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWiiNNDFSLEFgyLIDPLTSIMSIL 80
Cdd:PRK07691 14 VITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFAALLVLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAANACQKAF 160
Cdd:PRK07691 86 SSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLRESIKYV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PT 239
Cdd:PRK07691 165 LINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGSYYApPI 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 571332137 240 PISALIhAATMVAAGIFLVARLLPLFRV--IPYIMYFISVIGIITVFLGA 287
Cdd:PRK07691 242 AIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGV 290
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
118-286 |
2.44e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 48.61 E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 118 GLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNli 197
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 198 ynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFRVIP---YIMY 273
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170
....*....|...
gi 571332137 274 FISVIGIITVFLG 286
Cdd:PRK08377 275 LVIIMATLTVFFA 287
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-242 |
4.85e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.42 E-value: 4.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 18 RRMWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEfgylIDPLTSIMSILITTVGIMVLIYS---DN 94
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYGiypNR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 95 YMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGI 174
Cdd:PRK12662 102 KEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGI 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 571332137 175 LGFYWITGSFEFRDLFEIFNNLIYNNEVNflfvtLCAVLLFAGAVAKSAQFPLHVWLPDAM-EGPTPIS 242
Cdd:PRK12662 181 GFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFIS 244
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
2-287 |
3.66e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.70 E-value: 3.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLI-LFPTATKSFRrmWAFQSVLLLSIVMLFSIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIDPLtSIMSIL 80
Cdd:PRK07363 10 ILGAIIIgFFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL-SLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 81 ITTVGIMVLIYSDNYMAYDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAF 160
Cdd:PRK07363 87 LNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 161 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLfvtlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 240
Cdd:PRK07363 164 IYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 571332137 241 ISALIHAATMVAAGIFLVARL-LPLF-RVIPYIMYFISVIGIITVFLGA 287
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFgLQLFpQTWSLVAPGLAIIGTISVIYGA 286
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
75-287 |
4.54e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.78 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 75 SIMSILITTVGIMVLIYSDNYMAYDqGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWftrpvaAN 154
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEYDHYG-KWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 155 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfeifnnliynnevNFLFVTLCAVLLFAGAVAKSAQFPLHV-- 229
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 230 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP--YIMYFISVIGIITVFLGA 287
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGA 241
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
24-256 |
8.88e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.47 E-value: 8.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 24 QSVLLLSIVMLFsIYLSIQQINSSSFYQYVWSWIINNDFSLEFGYLIdpltsIMSILITTVGIMVLIYSDNYMAYDQGYL 103
Cdd:MTH00199 24 LSTLKLSIGVLL-LIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 104 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 183
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 571332137 184 FEFRDlfeifNNLIYNNEVNFLFVTLCavLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIF 256
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF 237
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
2-245 |
1.07e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.45 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 2 LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMLFSIYLSIQQINSSSFYQYVWS--WIINNDFSLEFGylIDPLTSIMSI 79
Cdd:PRK06473 10 LLGAILIGFWPSGINGKLARSV-ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWIDSLGLSYHLG--VDGLSLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 80 LITTVGIMVLIYSDNYMAYDQGYlrfFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKA 159
Cdd:PRK06473 87 LNSLLTLIAIYSSDESIQRPRFY---YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 160 FVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFNNLIYNN-EVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDA-MEG 237
Cdd:PRK06473 163 LLYTAISGILILVSFLGLVWLSGASSFD-----YEPLRSHTlPLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEA 235
|
....*...
gi 571332137 238 PTPISALI 245
Cdd:PRK06473 236 STPVSVLL 243
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
124-265 |
2.67e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.13 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 124 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVN 203
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 571332137 204 FLFVTlcavlLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF 265
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPIL 288
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
116-257 |
3.37e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 116 MLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnN 195
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 571332137 196 LIYNNEV-NFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL 257
Cdd:MTH00217 198 LKIEKELqYFIF-----LGFFLSLAIKIPKIPFHIWLPQAhVEAPV-------AGSVILAGVLL 249
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
115-287 |
5.28e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.09 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 115 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFN 194
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 195 NLIYNNEVNFLFVTLCAV--LLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFRVIPYI 271
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIvaLLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV 152
|
170
....*....|....*.
gi 571332137 272 MYFIsVIGIITVFLGA 287
Cdd:MTH00196 153 NILL-IGGLFSLFVGA 167
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
68-287 |
7.69e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 37.62 E-value: 7.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 68 YLIDPLTSIMSILITTVGIMVLIYSDNYMAYDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 147
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571332137 148 TRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflfVTLCAVLLFAGAVaKSAQFPL 227
Cdd:PRK12663 153 ER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPF 226
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 571332137 228 HvWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP-LFRVIPYIMYF-ISVIGIITVFLGA 287
Cdd:PRK12663 227 M-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGA 287
|
|
| |
