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Conserved domains on  [gi|571254798|emb|CAP12388|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Poecilimon obesus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-128 1.74e-57

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 179.96  E-value: 1.74e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGW 123
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-128 1.74e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 179.96  E-value: 1.74e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGW 123
NADHdh pfam00146
NADH dehydrogenase;
14-128 3.40e-32

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 114.88  E-value: 3.40e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   14 LLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 571254798   94 MVYPYMTTLF--SFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGW 119
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-128 8.39e-31

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 111.76  E-value: 8.39e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   5 EAVLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIF 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 571254798  85 SLFLALLVWMVYPY--MTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:COG1005   87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGW 132
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 7-128 1.74e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 179.96  E-value: 1.74e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGW 123
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-128 5.19e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 165.98  E-value: 5.19e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGW 122
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-129 3.94e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 161.19  E-value: 3.94e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGWT 129
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWS 123
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 7-128 6.27e-39

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 132.56  E-value: 6.27e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00195   2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00195  82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGW 123
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 7-129 8.04e-38

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 129.65  E-value: 8.04e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00218   2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGWT 129
Cdd:MTH00218  82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWA 124
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 11-129 1.00e-37

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 129.52  E-value: 1.00e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  11 VSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLAL 90
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 571254798  91 LVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGWT 129
Cdd:MTH00010  87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWT 125
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 10-128 1.62e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 129.24  E-value: 1.62e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  10 VVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLA 89
Cdd:MTH00111   8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 571254798  90 LLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00111  88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGW 126
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-128 2.05e-37

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 128.97  E-value: 2.05e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  14 LLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLALLVW 93
Cdd:MTH00104   7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 571254798  94 MVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00104  87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGW 121
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 7-128 5.31e-36

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 125.50  E-value: 5.31e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00071   5 ISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMAL 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00071  85 TLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGW 126
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-128 5.04e-33

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 117.38  E-value: 5.04e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSL 86
Cdd:MTH00040   4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  87 FLALLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00040  84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGW 125
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 10-128 1.85e-32

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 116.24  E-value: 1.85e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  10 VVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLA 89
Cdd:MTH00134   9 IINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLA 88

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 571254798  90 LLVWMVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00134  89 LTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGW 127
NADHdh pfam00146
NADH dehydrogenase;
14-128 3.40e-32

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 114.88  E-value: 3.40e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   14 LLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLALLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 571254798   94 MVYPYMTTLF--SFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:pfam00146  83 AVIPFGPGLVlaDLNVGILYILALSSLGVYGILLAGW 119
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-128 8.39e-31

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 111.76  E-value: 8.39e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   5 EAVLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIF 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 571254798  85 SLFLALLVWMVYPY--MTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:COG1005   87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGW 132
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-128 3.84e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 110.21  E-value: 3.84e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   3 LYEAVLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAP 82
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 571254798  83 IFSLFLALLVWMVYPYM--TTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00216  82 VLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGW 129
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 10-129 2.32e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 105.19  E-value: 2.32e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  10 VVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLA 89
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 571254798  90 LLVWMVYPYMT--TLFSFNLGLLFFLCCTSMGVYTVMIAGWT 129
Cdd:MTH00054  85 FIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWS 126
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
10-128 2.40e-27

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 102.58  E-value: 2.40e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  10 VVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLA 89
Cdd:PRK06076  13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 571254798  90 LLVWMVYPY--MTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:PRK06076  93 FLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGW 133
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-129 3.55e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 96.12  E-value: 3.55e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798  14 LLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAPIFSLFLALLVW 93
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 571254798  94 MVYPYMTTLFSFNLGLLFFLCCTSMGVYTVMIAGWT 129
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIV 118
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-128 1.07e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 90.85  E-value: 1.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   1 MVLYEAVLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYL 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 571254798  81 APIFSLFLALLVWMVYPYMTTLF--SFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00029  81 APIISFTLAILAWAIVTMDQGVFlsDLDVGVLYFLAISSLSVYAILLSGW 130
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-128 2.50e-14

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 67.26  E-value: 2.50e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   7 VLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKegaspvlSNYILYYLAPIFSL 86
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK-------FKVYGFQSRSWFSL 73

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 571254798  87 F-LALLVWMVYPYMTTLFSFNLG------LLFFLCCTSMGVYTVMIAGW 128
Cdd:MTH00058  74 FgVFLLVLLVVFYCFIYGSYYSGsysslsLLWFLVVTSFSSYSLLCVGW 122
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-128 5.22e-08

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 49.95  E-value: 5.22e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 571254798   3 LYEAVLGVVSSLLLIICVLVGMAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPLADAMKLFTKEGASPVLSNYILYYLAP 82
Cdd:CHL00032  23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 571254798  83 IFSLFLALLVWMVYP--YMTTLFSFNLGLLFFLCCTSMGVYTVMIAGW 128
Cdd:CHL00032 103 SIAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGY 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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