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Conserved domains on  [gi|569002908|ref|XP_006525534|]
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synaptopodin isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 815-1087 1.03e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.40  E-value: 1.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  815 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 882
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  883 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 938
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  939 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 1015
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002908 1016 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 1087
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PRK13914 super family cl36314
invasion associated endopeptidase;
254-371 3.40e-06

invasion associated endopeptidase;


The actual alignment was detected with superfamily member PRK13914:

Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.96  E-value: 3.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  254 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 333
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002908  334 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 371
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 291-583 1.60e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  291 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 370
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  371 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 450
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  451 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 530
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 569002908  531 LGQRSPVLERRPLGNFTPPPTYA-ETLSTAPVASRVRSPPSYSTLYPSSDPKPS 583
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVpRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 815-1087 1.03e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.40  E-value: 1.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  815 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 882
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  883 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 938
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  939 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 1015
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002908 1016 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 1087
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PRK13914 PRK13914
invasion associated endopeptidase;
254-371 3.40e-06

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.96  E-value: 3.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  254 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 333
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002908  334 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 371
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PHA03247 PHA03247
large tegument protein UL36; Provisional
 291-583 1.60e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  291 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 370
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  371 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 450
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  451 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 530
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 569002908  531 LGQRSPVLERRPLGNFTPPPTYA-ETLSTAPVASRVRSPPSYSTLYPSSDPKPS 583
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVpRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 815-1087 1.03e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.40  E-value: 1.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  815 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 882
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  883 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 938
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  939 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 1015
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002908 1016 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 1087
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PHA03247 PHA03247
large tegument protein UL36; Provisional
 730-1083 2.87e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.86  E-value: 2.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  730 SGHAELARCPSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASlyHGYLPENGVLRPEPTKQQPYQMRPSLYALSPVKE 809
Cdd:PHA03247 2578 SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDT--HAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDD 2655

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  810 PA----KASSRATSSRTPSRTVSP--RAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSP 883
Cdd:PHA03247 2656 PApgrvSRPRRARRLGRAAQASSPpqRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL 2735

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  884 TYS--------------------SDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPESLPTSP---PWTPAASRPP 940
Cdd:PHA03247 2736 PAApappavpagpatpggparpaRPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWdpaDPPAAVLAPA 2815

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  941 SSLDGWVSPGPWEP---GRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSeteaRPPSRQLQALLARNIINAARRKSASPR 1017
Cdd:PHA03247 2816 AALPPAASPAGPLPpptSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRR----RPPSRSPAAKPAAPARPPVRRLARPAV 2891

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569002908 1018 PAPAETLrpfsppQGPPPPPARMRSPQPASPARNFRGAAFSPIPRSPLPIGPSScASPRSPQAAPS 1083
Cdd:PHA03247 2892 SRSTESF------ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP-QPPLAPTTDPA 2950
PRK13914 PRK13914
invasion associated endopeptidase;
254-371 3.40e-06

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.96  E-value: 3.40e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  254 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 333
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002908  334 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 371
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
725-945 2.32e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.69  E-value: 2.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  725 YVIESSGHAELARCPSP----TMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTKQQPyqmrPS 800
Cdd:PRK07003  328 YQIATVGRGELGLAPDEyagfTMTLLRMLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTA----VT 403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  801 LYALSPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTA 880
Cdd:PRK07003  404 GAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASD 483

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 569002908  881 VSPTYSSDISP--VSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPEslPTSPPWTPAASRPPSSLDG 945
Cdd:PRK07003  484 APPDAAFEPAPraAAPSAATPAAVPDARAPAAASREDAPAAAAPPA--PEARPPTPAAAAPAARAGG 548
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 729-1102 6.68e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.47  E-value: 6.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  729 SSGHAELARCPSPTMSLPSSWKYTTNAPGGFR--VASLSPARTPPAslyhgylPENGVLRPEPTKQQPYQMRPSLYALSP 806
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASPAREGSptPPGPSSPDPPPP-------TPPPASPPPSPAPDLSEMLRPVGSPGP 146

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  807 VKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGlytAPVQDSLQPTAVSPTYS 886
Cdd:PHA03307  147 PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP---PRRSSPISASASSPAPA 223

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  887 SDISPVSPSRA--WSPRAKQAPRPSFSTRNAGIEAQDRPESLPTsPPWTPAASRPPSSLDGWVSPGPWEPGRGSSMSSPP 964
Cdd:PHA03307  224 PGRSAADDAGAssSDSSSSESSGCGWGPENECPLPRPAPITLPT-RIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSS 302

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  965 PLPPPPPMSPSWSERSVSPLRSETEARPPSrqlqallarniiNAARRKSASPRPAPaetlRPFSPPQGPPPPPARMRSPQ 1044
Cdd:PHA03307  303 PGSGPAPSSPRASSSSSSSRESSSSSTSSS------------SESSRGAAVSPGPS----PSRSPSPSRPPPPADPSSPR 366

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 569002908 1045 PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFPYRRSPTDSDVSLDSE 1102
Cdd:PHA03307  367 KRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASG 424
PHA03247 PHA03247
large tegument protein UL36; Provisional
 291-583 1.60e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  291 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 370
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  371 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 450
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  451 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 530
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 569002908  531 LGQRSPVLERRPLGNFTPPPTYA-ETLSTAPVASRVRSPPSYSTLYPSSDPKPS 583
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVpRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 788-956 5.03e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 44.30  E-value: 5.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  788 EPTKQQPYQMRPSLYALSPVKEPAKASSRATSSRTPSRTVSPRaaSPAKPSSLDLVPNLPRAGLPPSPALPRPSrsspgl 867
Cdd:PTZ00449  568 KPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK--SPKLPELLDIPKSPKRPESPKSPKRPPPP------ 639

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  868 yTAPVQDSLQPTAVSPTYSSdiSPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPESLPTSPPWTPAASRPPSSLDGWV 947
Cdd:PTZ00449  640 -QRPSSPERPEGPKIIKSPK--PPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFT 716


                  ....*....
gi 569002908  948 SPGPWEPGR 956
Cdd:PTZ00449  717 TPRPLPPKL 725
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 805-993 7.56e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 7.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  805 SPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGlPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSPT 884
Cdd:PRK07764  603 PASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAP 681

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  885 YSSDISPVSPSRAWSPRAKQAPRPSFSTRnagIEAQDRPESLPTSPPWTPAASRPPSSLDGWVSPGPWEPGRGSSMSSPP 964
Cdd:PRK07764  682 PPAPAPAAPAAPAGAAPAQPAPAPAATPP---AGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQP 758

                         170       180
                  ....*....|....*....|....*....
gi 569002908  965 PLPPPPPMSPSWSERSVSPLRSETEARPP 993
Cdd:PRK07764  759 PPPPAPAPAAAPAAAPPPSPPSEEEEMAE 787
dnaA PRK14086
chromosomal replication initiator protein DnaA;
820-957 2.70e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 41.73  E-value: 2.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  820 SRTPSRTVSP--RAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSPTYSSDISPVSPSRA 897
Cdd:PRK14086   71 SETLSRELGRpiRIAITVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQ 150

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569002908  898 WSPRAKQAPRPSFS-----TRNAGIEAQDRPEslPTSPPWTPAASRPPSSLDGWVSPGPWEPGRG 957
Cdd:PRK14086  151 QRPEPGAWPRAADDygwqqQRLGFPPRAPYAS--PASYAPEQERDREPYDAGRPEYDQRRRDYDH 213
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 787-1098 3.26e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.70  E-value: 3.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  787 PEPTKQQPYQMRPSLYALSPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPP-------SPALPR 859
Cdd:PHA03307   61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPpspapdlSEMLRP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  860 PSRSSPGLYTAPVQDSLQPTAV--SPTYSSDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPeslptSPPWTPAAS 937
Cdd:PHA03307  141 VGSPGPPPAASPPAAGASPAAVasDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP-----PRRSSPISA 215

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  938 RPPSSldgwvSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQAllARNIINAARRKSASPR 1017
Cdd:PHA03307  216 SASSP-----APAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEA--SGWNGPSSRPGPASSS 288

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908 1018 PAPAEtlrpfsPPQGPPPPPARMRSPQPASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFPYRRSPTDSDV 1097
Cdd:PHA03307  289 SSPRE------RSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADP 362


                  .
gi 569002908 1098 S 1098
Cdd:PHA03307  363 S 363
PHA03247 PHA03247
large tegument protein UL36; Provisional
 205-871 4.65e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 4.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  205 GHAPGP-SVKPTSPSKPGSPKHPSPQSPSRGVAGHIMegYSEEASLLRHLEKVASEE--EEVPLVVYLKENAALltangl 281
Cdd:PHA03247 2493 GAAPDPgGGGPPDPDAPPAPSRLAPAILPDEPVGEPV--HPRMLTWIRGLEELASDDagDPPPPLPPAAPPAAP------ 2564

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  282 hlSQSRETQQSSPNPPDTEVPSPAA--DINQNPSSPNATLTTLASSSHHSQPTAdinqNPPAAITPVPQNSSQaqcSPNG 359
Cdd:PHA03247 2565 --DRSVPPPRPAPRPSEPAVTSRARrpDAPPQSARPRAPVDDRGDPRGPAPPSP----LPPDTHAPDPPPPSP---SPAA 2635

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  360 TLDSKPGTLCADDGQSPVPAEEVRSsILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQ 439
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGR-VSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHA 2714

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  440 EVPGHVAVTTPTKVYSEVHLTLAKPA--SVVNRTARPFGIQSPGTSQIEQSPmmgrrqfgeKAWAPPASSMADRSPQPQR 517
Cdd:PHA03247 2715 LVSATPLPPGPAAARQASPALPAAPAppAVPAGPATPGGPARPARPPTTAGP---------PAPAPPAAPAAGPPRRLTR 2785

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  518 HIMSRSPMVERRLLGQRSPVLERRPLgnftPPPTYAETLSTAPvASRVRSPPSYSTLYPSSDPKPSH----LKGQVAPAN 593
Cdd:PHA03247 2786 PAVASLSESRESLPSPWDPADPPAAV----LAPAAALPPAASP-AGPLPPPTSAQPTAPPPPPGPPPpslpLGGSVAPGG 2860

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  594 ktgileeSMARRGSRKSMftfVEKPKVTPNPDLLDLVQTAdekrrqrdhgeVGMEEEPFALGAEASNFQQEPIARDRASP 673
Cdd:PHA03247 2861 -------DVRRRPPSRSP---AAKPAAPARPPVRRLARPA-----------VSRSTESFALPPDQPERPPQPQAPPPPQP 2919

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  674 AAAEEAVPEWASCLKSP-RIQAKPKPKPN-QNLSEASGKGAELYarrqsrmekyviesSGHAELARCPSPTMSLPSswky 751
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPpRPQPPLAPTTDpAGAGEPSGAVPQPW--------------LGALVPGRVAVPRFRVPQ---- 2981

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  752 ttNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTkQQPYQMRPSLYALSPVKEpakassratSSRTPSRTVSPRA 831
Cdd:PHA03247 2982 --PAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETD-PPPVSLKQTLWPPDDTED---------SDADSLFDSDSER 3049

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|
gi 569002908  832 ASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAP 871
Cdd:PHA03247 3050 SDLEALDPLPPEPHDPFAHEPDPATPEAGARESPSSQFGP 3089
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
274-365 4.90e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 40.99  E-value: 4.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  274 ALLTANGLHLSQSRETQQSSPNPP-----DTEVPSPAADINQNPSSPNATLTtlaSSSHHSQPTADINQNPPAAITPVpQ 348
Cdd:PRK11907   16 ALLTASNPKLAQAEEIVTTTPATSteaeqTTPVESDATEEADNTETPVAATT---AAEAPSSSETAETSDPTSEATDT-T 91

                          90
                  ....*....|....*..
gi 569002908  349 NSSQAQCSPNGTLDSKP 365
Cdd:PRK11907   92 TSEARTVTPAATETSKP 108
PHA03247 PHA03247
large tegument protein UL36; Provisional
 739-1021 5.46e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 5.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  739 PSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTKQQPYQMRPSLYALSPvkePAKASSRAT 818
Cdd:PHA03247 2712 PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGP---PRRLTRPAV 2788

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  819 SSRTPSRTVSPRAASPAKPssldlvpnlPRAGLPPSPALPRPSRSSPGLytaPVQDSLQPTAVSPTYSSDISPVSPSRAW 898
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADP---------PAAVLAPAAALPPAASPAGPL---PPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  899 SPRAKQAPRPSFSTRNAGIEAQDRPeslPTSPPWTPAASRPPSSL----DGWVSPGPWEPGRGSSMSSPPPLPPPPPMSP 974
Cdd:PHA03247 2857 APGGDVRRRPPSRSPAAKPAAPARP---PVRRLARPAVSRSTESFalppDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 569002908  975 SWSERSVSPLRSETEARP--------PSRQLQALLARNIINAARR--KSASPRPAPA 1021
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGagepsgavPQPWLGALVPGRVAVPRFRvpQPAPSREAPA 2990
PHA03378 PHA03378
EBNA-3B; Provisional
 793-1099 8.97e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.44  E-value: 8.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  793 QPYQMRPSLYALSPVKEPAKASSRATSSRTPSRTvspRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPv 872
Cdd:PHA03378  552 EPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQL---ASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMP- 627

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  873 qdsLQPTAVSPTYSSDIS---PVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPESLPTS--PPWTPAASRPPSSLDGWV 947
Cdd:PHA03378  628 ---LRPIPMRPLRMQPITfnvLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMlpIQWAPGTMQPPPRAPTPM 704

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002908  948 SPGPWEPGRGSSmssppplpppppmspswsersvsPLRSETEARPPSrqlqallarNIINAARRKSASPRPAPaetlrpf 1027
Cdd:PHA03378  705 RPPAAPPGRAQR-----------------------PAAATGRARPPA---------AAPGRARPPAAAPGRAR------- 745

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 569002908 1028 sppqGPPPPPARMRSPQPA-SPARNFRGAAFSPIPRSPLPIGPsscASPRSPQAAPSRPFPYRRSPTDSDVSL 1099
Cdd:PHA03378  746 ----PPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPP---APQQRPRGAPTPQPPPQAGPTSMQLMP 811
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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