|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG super family |
cl20936 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1679 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
The actual alignment was detected with superfamily member pfam15064:
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1830.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTIT--------------------GKNCSID 1112
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITdglvsfemlprgwsvcekipVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1113 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1188
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1189 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1268
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1269 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1348
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1349 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1428
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1429 SNRLAAEGIYINMNAYQKLYNMSGDYGIPDLFFLDKGNWFTFTVVLLSHQDTFTSSDSQGPTINVDKKLSLSLVLADPEC 1508
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1509 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1588
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1589 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1668
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945960 1669 EIFRYNSPLDT 1679
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP super family |
cl26313 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.46e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
The actual alignment was detected with superfamily member pfam08017:
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945960 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 super family |
cl36163 |
transcription termination factor Rho; Provisional |
81-318 |
1.59e-09 |
|
transcription termination factor Rho; Provisional
The actual alignment was detected with superfamily member PRK12678:
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 63.00 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945960 318 D 318
Cdd:PRK12678 290 D 290
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG |
pfam15064 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1679 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1830.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTIT--------------------GKNCSID 1112
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITdglvsfemlprgwsvcekipVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1113 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1188
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1189 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1268
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1269 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1348
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1349 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1428
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1429 SNRLAAEGIYINMNAYQKLYNMSGDYGIPDLFFLDKGNWFTFTVVLLSHQDTFTSSDSQGPTINVDKKLSLSLVLADPEC 1508
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1509 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1588
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1589 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1668
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945960 1669 EIFRYNSPLDT 1679
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.46e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945960 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
81-318 |
1.59e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 63.00 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945960 318 D 318
Cdd:PRK12678 290 D 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
209-414 |
3.50e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 209 QDQGRGQERRLSEDlnycNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQE 288
Cdd:PRK12678 129 ERRERGEAARRGAA----RKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAE---------RGERGRREE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 289 RRRSEDlnyRNTPALNQDQGRGQERRRSEDLNycntwglnQDQGRGQERRlsedlsycnirdlnQDQGRGQEWRRSEDPN 368
Cdd:PRK12678 196 RGRDGD---DRDRRDRREQGDRREERGRRDGG--------DRRGRRRRRD--------------RRDARGDDNREDRGDR 250
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945960 369 HRDTRglsqDQGRGQKRRQSEDLNycNTRGLNQDLGRGQERRLSED 414
Cdd:PRK12678 251 DGDDG----EGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
128-390 |
1.49e-07 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 56.03 E-value: 1.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 128 AEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTP 205
Cdd:pfam08017 38 AENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 206 ALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYSNTWGLNQDQGR 285
Cdd:pfam08017 118 AENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRD 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 286 GQERRRSEDLNYRNTPALNQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRL--SEDLSYCNIRDLNQDQGRGQEWRR 363
Cdd:pfam08017 198 AENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENRSQGNVLERRQrdAENKSQGNVLERRQRDAENRSQGN 269
|
250 260
....*....|....*....|....*..
gi 568945960 364 SEDPNHRDTRGLSQDQGRGQKRRQSED 390
Cdd:pfam08017 270 VLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CATSPERG |
pfam15064 |
Cation channel sperm-associated protein subunit gamma; This family represents the gamma ... |
733-1679 |
0e+00 |
|
Cation channel sperm-associated protein subunit gamma; This family represents the gamma subunit of the CATSPER, or cation channel sperm-associated protein complex. The complex appears only to be expressed in the flagellum of sperm. The complex is activated at alkaline intracellular pH, and being restricted to the flagellum is the mediating calcium channel.
Pssm-ID: 464479 Cd Length: 971 Bit Score: 1830.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 733 MSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQHCTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSP 812
Cdd:pfam15064 1 MSPVGPAWPRKPVLRALWALRVVLLLPWRLWAEDELQHCTWLVVLNKFEKVGLNLSSDRFFDQEPIDTVDKVFQKLVDSP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 813 IDPSENYLSFPYYLQINFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYCPAEAMC 892
Cdd:pfam15064 81 IDPSENYLGFPYYLKINYSCPGQNSEELVRKGHLTGLKPMVLVTFQSPVNFYRWKIEQLQIQMEAAPFRSTEYCPAEELC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 893 ILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSLFAIGYESLVLKSSHFRLSKSRPLWYTVN 972
Cdd:pfam15064 161 VMNWYTPMPIKNGSVVMSVDIYSNGLGPFIPKKRFQVNINGFLKRDRSNKSLFAVGYESLDLKPRHFVNVPSRPLWYTVD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 973 HAPVFILGGFYDEKAILFSDSNFQDYVLLELSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTL 1052
Cdd:pfam15064 241 HAPVLILGGIPDEKAILFTDTNFQDFVLVELSIDSCWVGSFYCPILGFSATIYDAIATESTLFIRQNQLVYYFTGTYPTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1053 FDKSHGSSRWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTIT--------------------GKNCSID 1112
Cdd:pfam15064 321 HEKNHGSGRWVRVLASECIKKLCPVYFHSNGSEYVLALTTGKNEGYIHFGTITdglvsfemlprgwsvcekipVKNCSIT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1113 WATYITDERNLLLLVKID---SGQFYL-VNFNTEFKTLNILYKIPEFIPEAKELDFLVLLDTVTYTNTPMTPKGLFFNTL 1188
Cdd:pfam15064 401 WATYIADDYNLLLLVEIDhntSGQYFLvVNYNTEFDTLNILYKIPEFIPDARGLEFLMILGTESYTNTPMTPKGMFFNTY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1189 NNMLYIWGNFILQSYNREEFIFLADFPKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKM 1268
Cdd:pfam15064 481 NNLLFIWGNFLLQSYNKENYIYLADFPKELSIKYLVNSFHGDMAIVTETEEIWYLLEGSYDVYKLFPSKGWETYLSLQKM 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1269 QKSPLYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGNYKMITFTNTCPFKAIHAV 1348
Cdd:pfam15064 561 QQSSFYSHNETMVTLFYEDNKLYQLVYLIDVQKGRLVKRLLPVETLLMYQLPKPYTVENQGSHLTLSFTNTCPFTAMHLQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1349 DVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLF 1428
Cdd:pfam15064 641 DLPKPQHYTRQERYRALPPLVLESLGFHNNNSLAVYQGLVYYLLWLHSKYDKPYADPVHDPTWRWWKNKKQDQDYYFYLA 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1429 SNRLAAEGIYINMNAYQKLYNMSGDYGIPDLFFLDKGNWFTFTVVLLSHQDTFTSSDSQGPTINVDKKLSLSLVLADPEC 1508
Cdd:pfam15064 721 SNWLSAGGVHIDMNSYEKIYNLSGEYGLPERIFLDKGTWYTFSVFLTARGDTFTSSDSQGATIQVDSKVDLAVVLADPEC 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1509 LSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNCIQRTYLGDHIQGIRLVPIFIGCPPGK 1588
Cdd:pfam15064 801 LEAVVKQEVLLNRNSVLFKITLIDKKRCSEQGISGHHLMKTSMMIKVLGSSGHCFQNTYLGASMQGNLMVPIFIGCPPGK 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 1589 RLAFDVSYTIKHSEEINKHYFDCVIKDAEMPCFLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEE 1668
Cdd:pfam15064 881 RLAFDITYTLKYNRLQNKHYFDCVIKDAEMPCFLFRDLFYPFFLIQDLVTGDSGSFQGSYVLKVVGGGPTLNTIRDYTEE 960
|
970
....*....|.
gi 568945960 1669 EIFRYNSPLDT 1679
Cdd:pfam15064 961 EIYRFNSPLDT 971
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
304-666 |
7.46e-11 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 66.43 E-value: 7.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 304 NQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRG 382
Cdd:pfam08017 24 NQSQGNVLERRQRD--------AENRSQGNVLERRQ---------RDAeNRSQGNVLERRQRDAENRSQGNVLERRQRDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 383 QKRRQSEDLNYCNTRGLNQDLGRGQERRLSEdlnycntrGLNEDLGRGQERRLSEdlnycntrGLNQDQGRGQERRQSKd 462
Cdd:pfam08017 87 ENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENKSQGNVLERRQRD--------AENRSQGNVLERRQRD- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 463 wnycntwGLNQYQGRGQERRlSEDLNycntrclNQDQGRSQERRlSKDSNycntwglNQDQGHGQEKKQTEDLNYCNTRD 542
Cdd:pfam08017 150 -------AENRSQGNVLERR-QRDAE-------NRSQGNVLERR-QRDAE-------NKSQGNVLERRQRDAENRSQGNV 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 543 LSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQERRQSEDLNYCNTQGLNQDRGRGQERRQSEHLNYCNTWSLNQDQGRG 622
Cdd:pfam08017 207 LERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNV 286
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568945960 623 QERRQsedplyRDTPDRSQ-DQGRGQKRKQSQDLISRTTQTLSQG 666
Cdd:pfam08017 287 LERRQ------RDAENKSQvGQLIGKNPLLSKSIISRENNHSSQG 325
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
81-318 |
1.59e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 63.00 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 81 RERTDWSEERLLCEETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSG 160
Cdd:PRK12678 84 AAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAER 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 161 QDQGRGQEWRRSEDPnycntwGLNQDQGRGQERRLSEGlnyRNTPALNQDQGRGQERRlsedlnycntrDLNQDQGRGQE 240
Cdd:PRK12678 164 TEEEERDERRRRGDR------EDRQAEAERGERGRREE---RGRDGDDRDRRDRREQG-----------DRREERGRRDG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 241 RRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNtpalNQDQGRGQ---ERRRSE 317
Cdd:PRK12678 224 GDRRGRRRRRDRRDARGDDNREDRGDRDGD----------DGEGRGGRRGRRFRDRDRR----GRRGGDGGnerEPELRE 289
|
.
gi 568945960 318 D 318
Cdd:PRK12678 290 D 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
117-391 |
7.06e-09 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 60.69 E-value: 7.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 117 RGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALD--PGRRSGQDQGRGQEWRRSEDPNycntwgLNQDQGRGQERR 194
Cdd:PRK12678 59 RGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEaaAAKAEAAPAARAAAAAAAEAAS------APEAAQARERRE 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 195 lseglnyrntpalNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYS 274
Cdd:PRK12678 133 -------------RGEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 275 ntwglNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDlnycntwglNQDQGRGQERRLSEDlsycnirdlNQD 354
Cdd:PRK12678 200 -----GDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDA---------RGDDNREDRGDRDGD---------DGE 256
|
250 260 270
....*....|....*....|....*....|....*..
gi 568945960 355 QGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRRQSEDL 391
Cdd:PRK12678 257 GRGGRRGRRFRDRDRRGRRGGDGGNEREPELREDDVL 293
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
161-459 |
1.62e-08 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 59.11 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 161 QDQGRGQEWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTPALNQDQGRGQERRlsedlnycnTRDL-NQDQGRGQ 239
Cdd:pfam08017 25 QSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERR---------QRDAeNRSQGNVL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 240 ERRRSEDPNRrdtpglsqDQGRGQERRRSEDLNYSNTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRsEDL 319
Cdd:pfam08017 96 ERRQRDAENR--------SQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQ-RDA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 320 NycntwglNQDQGRGQERRLsedlsycniRDL-NQDQGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRRQSEDLNYCNTRG 398
Cdd:pfam08017 167 E-------NRSQGNVLERRQ---------RDAeNKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDA 230
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568945960 399 LNQDLGRGQERRLSEDLNYCNTRGLNEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQ 459
Cdd:pfam08017 231 ENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQ 291
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
209-414 |
3.50e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 209 QDQGRGQERRLSEDlnycNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQE 288
Cdd:PRK12678 129 ERRERGEAARRGAA----RKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAE---------RGERGRREE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 289 RRRSEDlnyRNTPALNQDQGRGQERRRSEDLNycntwglnQDQGRGQERRlsedlsycnirdlnQDQGRGQEWRRSEDPN 368
Cdd:PRK12678 196 RGRDGD---DRDRRDRREQGDRREERGRRDGG--------DRRGRRRRRD--------------RRDARGDDNREDRGDR 250
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945960 369 HRDTRglsqDQGRGQKRRQSEDLNycNTRGLNQDLGRGQERRLSED 414
Cdd:PRK12678 251 DGDDG----EGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
233-438 |
3.56e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 58.38 E-value: 3.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 233 QDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglNQDQGRGQERRRSEDlnyRNTPALNQDQGRGQE 312
Cdd:PRK12678 122 PEAAQARERRERGEAARRGAARKAGEGGEQPATEARAD---------AAERTEEEERDERRR---RGDREDRQAEAERGE 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 313 RRRSEDlnycntwglnqDQGRGQERRlsedlsycniRDLNQDQGRGQEWRRSEDPNHRDTRGlsQDQGRGQKRRQSEDLN 392
Cdd:PRK12678 190 RGRREE-----------RGRDGDDRD----------RRDRREQGDRREERGRRDGGDRRGRR--RRRDRRDARGDDNRED 246
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 568945960 393 YCNTRGLNQDLGRGQERRLSEDLNycNTRGLNEDLGRGQERRLSED 438
Cdd:PRK12678 247 RGDRDGDDGEGRGGRRGRRFRDRD--RRGRRGGDGGNEREPELRED 290
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
94-342 |
4.96e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 57.99 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 94 EETTGGEERPQGVERPHDQERFPRGKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQEwRRSE 173
Cdd:PRK12678 68 ATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAA-RKAG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 174 DPNYCNTWGLNQDQGRGQERRLSEGLNYRNTPALNQDQGRGQERRLSEDlnycnTRDLNQDQGRGQERRRSEDPNRRDtp 253
Cdd:PRK12678 147 EGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREE-----RGRDGDDRDRRDRREQGDRREERG-- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 254 glSQDQGRGQERRRsedlnysntwglNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDlnycNTWGLNQDQGR 333
Cdd:PRK12678 220 --RRDGGDRRGRRR------------RRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRRFRDRD----RRGRRGGDGGN 281
|
....*....
gi 568945960 334 GQERRLSED 342
Cdd:PRK12678 282 EREPELRED 290
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
128-390 |
1.49e-07 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 56.03 E-value: 1.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 128 AEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRLSEGLNYRNTP 205
Cdd:pfam08017 38 AENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 206 ALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYSNTWGLNQDQGR 285
Cdd:pfam08017 118 AENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRD 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 286 GQERRRSEDLNYRNTPALNQDQGRGQERRRSEdlnycntwGLNQDQGRGQERRL--SEDLSYCNIRDLNQDQGRGQEWRR 363
Cdd:pfam08017 198 AENRSQGNVLERRQRDAENRSQGNVLERRQRD--------AENRSQGNVLERRQrdAENKSQGNVLERRQRDAENRSQGN 269
|
250 260
....*....|....*....|....*..
gi 568945960 364 SEDPNHRDTRGLSQDQGRGQKRRQSED 390
Cdd:pfam08017 270 VLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
197-439 |
1.79e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 1.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 197 EGLNYRNTPALNQdqgRGQERRLS---EDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNY 273
Cdd:PTZ00121 1053 DGNHEGKAEAKAH---VGQDEGLKpsyKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARK 1129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 274 SNTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDLNYCNTWGLNQDQGRGQERRLSEDLSYCNIRDLNQ 353
Cdd:PTZ00121 1130 AEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAE 1209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 354 DQGRGQEWRRSEDPNH-------RDTRGLSQDQGRGQKRRQSEDLNYCNTRGL-----NQDLGRGQERRLSEDLNYCNTR 421
Cdd:PTZ00121 1210 EERKAEEARKAEDAKKaeavkkaEEAKKDAEEAKKAEEERNNEEIRKFEEARMahfarRQAAIKAEEARKADELKKAEEK 1289
|
250
....*....|....*...
gi 568945960 422 GLNEDLGRGQERRLSEDL 439
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEA 1307
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
41-320 |
4.32e-06 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 51.40 E-value: 4.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 41 QERPRDQERSPGRDTNWGKERIVYErgfgKERAKWEDRSGRERTDWSEERLLCEETTGGEERPQG---VERPHDQERFPR 117
Cdd:pfam08017 32 ERRQRDAENRSQGNVLERRQRDAEN----RSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGnvlERRQRDAENRSQ 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 118 GKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQEW-RRSEDPNycntwglNQDQGRGQERRLS 196
Cdd:pfam08017 108 GNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLeRRQRDAE-------NRSQGNVLERRQR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 197 EG--------LNYRNTPALNQDQGRGQERRlsedlnycnTRDL-NQDQGRGQERRRSEDPNRrdtpglsqDQGRGQERRR 267
Cdd:pfam08017 181 DAenksqgnvLERRQRDAENRSQGNVLERR---------QRDAeNRSQGNVLERRQRDAENR--------SQGNVLERRQ 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 568945960 268 SEDLNYSNTWGLNQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEDLN 320
Cdd:pfam08017 244 RDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAEN 296
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
239-459 |
5.58e-06 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 51.44 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 239 QERRRSEDPNRRDTPGLSQDQGRGQERRRSEDlnysntwglnQDQGRGQERRRSEDLNYRNTPALNQDQGRGQERRRSEd 318
Cdd:PRK12678 102 AEAAPAARAAAAAAAEAASAPEAAQARERRER----------GEAARRGAARKAGEGGEQPATEARADAAERTEEEERD- 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 319 lnycntwglNQDQGRGQERRlsedlsycNIRDLNQDQGRGQEWRRSEDPNHRDTRglsqdQGRGQKRRQSEDLNYCNTRG 398
Cdd:PRK12678 171 ---------ERRRRGDREDR--------QAEAERGERGRREERGRDGDDRDRRDR-----REQGDRREERGRRDGGDRRG 228
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568945960 399 LNQDLGRGQERRLSEDLNYCNTRGLNEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQ 459
Cdd:PRK12678 229 RRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRRFRDRDRRGRRGGDGGNEREPELRE 289
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
497-649 |
2.20e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.05 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 497 QDQGRSQERRLSKDSNYCNTWGLNQDQGHGQEKKQTEDLNYCNTRDLSQGQGRGQERRRSEDPNHRDTRGLSQDQGRGQE 576
Cdd:PRK12678 134 GEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGD 213
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568945960 577 RRQSEDlnycntqglNQDRGRGQERRQsehlnycntwslNQDQGRGQERRQSEDPLYRDTPDRSQDQGRGQKR 649
Cdd:PRK12678 214 RREERG---------RRDGGDRRGRRR------------RRDRRDARGDDNREDRGDRDGDDGEGRGGRRGRR 265
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
232-582 |
2.37e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 232 NQDQGRGqERRRSEDPNRRDTPGLSQDQGRGQERRRsEDLNYSNTWGLNQD-----QGRGQERRRSEDLNYRNtpalnQD 306
Cdd:PTZ00121 1054 GNHEGKA-EAKAHVGQDEGLKPSYKDFDFDAKEDNR-ADEATEEAFGKAEEakkteTGKAEEARKAEEAKKKA-----ED 1126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 307 QGRGQERRRSEDLNycntwglnqdqgRGQERRLSEDLSYCNIRDLNQDQGRGQEWRRSEDPNHRDTRGLSQDQGRGQKRR 386
Cdd:PTZ00121 1127 ARKAEEARKAEDAR------------KAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELR 1194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 387 QSEDlnycnTRGLNQDLGRGQERRLSEDLNYcntrglnEDLGRGQERRLSEDLNYCNTRGLNQDQGRGQERRQSKDWNYC 466
Cdd:PTZ00121 1195 KAED-----ARKAEAARKAEEERKAEEARKA-------EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 467 NTWGLNQYQGRGQERRLSEDLNYCNTRCLNQDQGRSQERRLSKDSnycntwglnqdQGHGQEKKQTEDLNycntRDLSQG 546
Cdd:PTZ00121 1263 AHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA-----------KKKAEEAKKADEAK----KKAEEA 1327
|
330 340 350
....*....|....*....|....*....|....*..
gi 568945960 547 QGRGQE-RRRSEDPNHRDTRGLSQDQGRGQERRQSED 582
Cdd:PTZ00121 1328 KKKADAaKKKAEEAKKAAEAAKAEAEAAADEAEAAEE 1364
|
|
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
41-274 |
3.62e-03 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 41.77 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 41 QERPRDQERSPGRDTNWGKERIVYERGFGKERakweDRSGRERTDWSEERLLCEETTGGEERPQG---VERPHDQERFPR 117
Cdd:pfam08017 64 ERRQRDAENRSQGNVLERRQRDAENRSQGNVL----ERRQRDAENRSQGNVLERRQRDAENKSQGnvlERRQRDAENRSQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568945960 118 GKAGLAGRAGAEEKPPGREKGFKEKGCDEQEGQVALDPGRRSGQDQGRGQ--EWRRSEDPNYCNTWGLNQDQGRGQERRL 195
Cdd:pfam08017 140 GNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNvlERRQRDAENRSQGNVLERRQRDAENRSQ 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568945960 196 SEGLNYRNTPALNQDQGRGQERRLSEDLNYCNTRDLNQDQGRGQERRRSEDPNRRDTPGLSQDQGRGQERRRSEDLNYS 274
Cdd:pfam08017 220 GNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKS 298
|
|
| |
