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Conserved domains on  [gi|567350802|gb|AHC82999|]
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hypothetical protein X969_13955 [Pseudomonas monteilii SB3078]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1001123)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions; similar to Oryctolagus cuniculus monocyte differentiation antigen CD14, a coreceptor for bacterial lipopolysaccharide

Gene Ontology:  GO:0005515
PubMed:  11751054

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
DUF6543 super family cl48348
Family of unknown function (DUF6543); This entry represents a region of unknown function found ...
52-651 3.13e-124

Family of unknown function (DUF6543); This entry represents a region of unknown function found in a variety of bacterial proteins.


The actual alignment was detected with superfamily member pfam20178:

Pssm-ID: 466329  Cd Length: 589  Bit Score: 396.74  E-value: 3.13e-124
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802    52 REAACASQARLMQAQAALANSLKGLQQITEFAEPLLQRRLAEHGF------HAQLRNSQLLRVKRSWHWAALRYlsshRR 125
Cdd:pfam20178    2 RTALSAALSESLAARARLAPLLAALQSLEAFAAPLLKQALKDRFGldldvrGDYLRRVYRLPIGTISPVTRLRY----SR 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   126 DNLLQAALQNFASDEvftaesaiALGDNIhvtpIQIQGAVPVGMQVPVAhfplqsehyqverLPLEPAAFATLCRDLDLG 205
Cdd:pfam20178   78 QSLLEAALQNFEADE--------TQGGGL----ITGGSLVVTGGGDPLA-------------LPLSPHAFARLCRSLDLG 132
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   206 KAYQAHLEQHL----AQPATRGLAIRVQKDRLRLAADLAYMRHLLDGSTLDQIERLLRG-------GTVQCWQLALFGTP 274
Cdd:pfam20178  133 RQYQAHLDSVLepaaHQSQVRALFRRQERYQLEVQAHIARLRGDIDEAAYQLLLQLVATgappwldGAVRCRQLSLLGIP 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   275 LHEVMLIDAGGAGLA----LYLPGHDPA-LRQCSNLDAVHDTLATLLLEPDARQAFTAYIRQDQRTHFLDLLQQNLDAtg 349
Cdd:pfam20178  213 LQGVLLIERTDDGAArpvvVYIPGDPHHpLREYASLQAFADALRERLRTRDYRRFFARFLPERQRAAFFARLNARLPP-- 290
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   350 ntayeRPWQRAAQADLRptRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAFFI 429
Cdd:pfam20178  291 -----RTWLPRANLDLA--SNPIPTPLFEALAQQHVAKIKDDARVLAVPTADEDRKAREERLQRYLDAGLNLLNVAAFFV 363
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   430 PGAGTLMLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRY 509
Cdd:pfam20178  364 PGLGELMLGVTAVQLLNEVYEGIEDWQEGDRHAALAHLLNVAENVALLAAMAAAAAAAVAIERSAFVDELVPVSLPNGEE 443
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   510 RLWNEDLTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQ 589
Cdd:pfam20178  444 RLWRPDLSPYEHGVALPATLLPDATGLYRHEGRQWLPLDGRVYEVRPDPDDGAWRIRHPSRPDAYEPLLRHNGAGAWRHE 523
                          570       580       590       600       610       620
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 567350802   590 HEQPGQWPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQR 651
Cdd:pfam20178  524 LEQPAEWEGTALFRRLGPDTAGLSDATADRALQASGTSEAVLRRLHVEHQPPPALLLDTLQR 585
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
971-1156 2.38e-14

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 2.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  971 LAIRPILNAWRRLSTITLEGGGRLHSLDLSGLDLDNQALASLALPDDFTHVQHLSLSYNPSLSQLpaefherfPNLNRLL 1050
Cdd:COG4886    48 LLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--------TNLESLD 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1051 LTDCRFDTVP-HLGSPEQLAWLDLEGNRItwsTQAQQALDRYPGLSVLDLSGNPLLEAPD-LRGLAYLRTLFLNDCALSE 1128
Cdd:COG4886   120 LSGNQLTDLPeELANLTNLKELDLSNNQL---TDLPEPLGNLTNLKSLDLSNNQLTDLPEeLGNLTNLKELDLSNNQITD 196
                         170       180
                  ....*....|....*....|....*...
gi 567350802 1129 LPQGLDQMIEPIILDIGDNQLLRLPDGF 1156
Cdd:COG4886   197 LPEPLGNLTNLEELDLSGNQLTDLPEPL 224
 
Name Accession Description Interval E-value
DUF6543 pfam20178
Family of unknown function (DUF6543); This entry represents a region of unknown function found ...
52-651 3.13e-124

Family of unknown function (DUF6543); This entry represents a region of unknown function found in a variety of bacterial proteins.


Pssm-ID: 466329  Cd Length: 589  Bit Score: 396.74  E-value: 3.13e-124
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802    52 REAACASQARLMQAQAALANSLKGLQQITEFAEPLLQRRLAEHGF------HAQLRNSQLLRVKRSWHWAALRYlsshRR 125
Cdd:pfam20178    2 RTALSAALSESLAARARLAPLLAALQSLEAFAAPLLKQALKDRFGldldvrGDYLRRVYRLPIGTISPVTRLRY----SR 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   126 DNLLQAALQNFASDEvftaesaiALGDNIhvtpIQIQGAVPVGMQVPVAhfplqsehyqverLPLEPAAFATLCRDLDLG 205
Cdd:pfam20178   78 QSLLEAALQNFEADE--------TQGGGL----ITGGSLVVTGGGDPLA-------------LPLSPHAFARLCRSLDLG 132
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   206 KAYQAHLEQHL----AQPATRGLAIRVQKDRLRLAADLAYMRHLLDGSTLDQIERLLRG-------GTVQCWQLALFGTP 274
Cdd:pfam20178  133 RQYQAHLDSVLepaaHQSQVRALFRRQERYQLEVQAHIARLRGDIDEAAYQLLLQLVATgappwldGAVRCRQLSLLGIP 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   275 LHEVMLIDAGGAGLA----LYLPGHDPA-LRQCSNLDAVHDTLATLLLEPDARQAFTAYIRQDQRTHFLDLLQQNLDAtg 349
Cdd:pfam20178  213 LQGVLLIERTDDGAArpvvVYIPGDPHHpLREYASLQAFADALRERLRTRDYRRFFARFLPERQRAAFFARLNARLPP-- 290
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   350 ntayeRPWQRAAQADLRptRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAFFI 429
Cdd:pfam20178  291 -----RTWLPRANLDLA--SNPIPTPLFEALAQQHVAKIKDDARVLAVPTADEDRKAREERLQRYLDAGLNLLNVAAFFV 363
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   430 PGAGTLMLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRY 509
Cdd:pfam20178  364 PGLGELMLGVTAVQLLNEVYEGIEDWQEGDRHAALAHLLNVAENVALLAAMAAAAAAAVAIERSAFVDELVPVSLPNGEE 443
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   510 RLWNEDLTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQ 589
Cdd:pfam20178  444 RLWRPDLSPYEHGVALPATLLPDATGLYRHEGRQWLPLDGRVYEVRPDPDDGAWRIRHPSRPDAYEPLLRHNGAGAWRHE 523
                          570       580       590       600       610       620
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 567350802   590 HEQPGQWPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQR 651
Cdd:pfam20178  524 LEQPAEWEGTALFRRLGPDTAGLSDATADRALQASGTSEAVLRRLHVEHQPPPALLLDTLQR 585
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
971-1156 2.38e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 2.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  971 LAIRPILNAWRRLSTITLEGGGRLHSLDLSGLDLDNQALASLALPDDFTHVQHLSLSYNPSLSQLpaefherfPNLNRLL 1050
Cdd:COG4886    48 LLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--------TNLESLD 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1051 LTDCRFDTVP-HLGSPEQLAWLDLEGNRItwsTQAQQALDRYPGLSVLDLSGNPLLEAPD-LRGLAYLRTLFLNDCALSE 1128
Cdd:COG4886   120 LSGNQLTDLPeELANLTNLKELDLSNNQL---TDLPEPLGNLTNLKSLDLSNNQLTDLPEeLGNLTNLKELDLSNNQITD 196
                         170       180
                  ....*....|....*....|....*...
gi 567350802 1129 LPQGLDQMIEPIILDIGDNQLLRLPDGF 1156
Cdd:COG4886   197 LPEPLGNLTNLEELDLSGNQLTDLPEPL 224
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
356-871 3.73e-07

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 54.88  E-value: 3.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  356 PWQRAAQADLRPTRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAFFIPGAGTL 435
Cdd:COG3321   867 PFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAALLALA 946
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  436 MLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRYRLWNED 515
Cdd:COG3321   947 AAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAA 1026
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  516 LTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQHEQPGQ 595
Cdd:COG3321  1027 LLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAALAAAL 1106
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  596 WPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQRMTAQAEVEALADKAPPGLFERFYN 675
Cdd:COG3321  1107 LLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALALAAALA 1186
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  676 GSAPATPATQKLLDAYARLSPALARRLLAPLSEAETFAWQEHSQLPTQVRQLLEQVHSELPLVRALEGVLQPARASSDSE 755
Cdd:COG3321  1187 AALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALAALALLA 1266
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  756 RLLFSALDAMPDWPADLRLELHGASPIGPLLEHVGREQAGTLRRVIKSVEGYEVDRGERPAPAPLDPDLCRAIEQALPRP 835
Cdd:COG3321  1267 AAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAAA 1346
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 567350802  836 HRDTLGITTADGSSLRQRVLGWVDQHREVLAQRLWG 871
Cdd:COG3321  1347 AAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALA 1382
LRR_8 pfam13855
Leucine rich repeat;
1044-1104 6.75e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 6.75e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 567350802  1044 PNLNRLLLTDCRFDTVP--HLGSPEQLAWLDLEGNRITwsTQAQQALDRYPGLSVLDLSGNPL 1104
Cdd:pfam13855    1 PNLRSLDLSNNRLTSLDdgAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
DUF6543 pfam20178
Family of unknown function (DUF6543); This entry represents a region of unknown function found ...
52-651 3.13e-124

Family of unknown function (DUF6543); This entry represents a region of unknown function found in a variety of bacterial proteins.


Pssm-ID: 466329  Cd Length: 589  Bit Score: 396.74  E-value: 3.13e-124
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802    52 REAACASQARLMQAQAALANSLKGLQQITEFAEPLLQRRLAEHGF------HAQLRNSQLLRVKRSWHWAALRYlsshRR 125
Cdd:pfam20178    2 RTALSAALSESLAARARLAPLLAALQSLEAFAAPLLKQALKDRFGldldvrGDYLRRVYRLPIGTISPVTRLRY----SR 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   126 DNLLQAALQNFASDEvftaesaiALGDNIhvtpIQIQGAVPVGMQVPVAhfplqsehyqverLPLEPAAFATLCRDLDLG 205
Cdd:pfam20178   78 QSLLEAALQNFEADE--------TQGGGL----ITGGSLVVTGGGDPLA-------------LPLSPHAFARLCRSLDLG 132
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   206 KAYQAHLEQHL----AQPATRGLAIRVQKDRLRLAADLAYMRHLLDGSTLDQIERLLRG-------GTVQCWQLALFGTP 274
Cdd:pfam20178  133 RQYQAHLDSVLepaaHQSQVRALFRRQERYQLEVQAHIARLRGDIDEAAYQLLLQLVATgappwldGAVRCRQLSLLGIP 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   275 LHEVMLIDAGGAGLA----LYLPGHDPA-LRQCSNLDAVHDTLATLLLEPDARQAFTAYIRQDQRTHFLDLLQQNLDAtg 349
Cdd:pfam20178  213 LQGVLLIERTDDGAArpvvVYIPGDPHHpLREYASLQAFADALRERLRTRDYRRFFARFLPERQRAAFFARLNARLPP-- 290
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   350 ntayeRPWQRAAQADLRptRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAFFI 429
Cdd:pfam20178  291 -----RTWLPRANLDLA--SNPIPTPLFEALAQQHVAKIKDDARVLAVPTADEDRKAREERLQRYLDAGLNLLNVAAFFV 363
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   430 PGAGTLMLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRY 509
Cdd:pfam20178  364 PGLGELMLGVTAVQLLNEVYEGIEDWQEGDRHAALAHLLNVAENVALLAAMAAAAAAAVAIERSAFVDELVPVSLPNGEE 443
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   510 RLWNEDLTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQ 589
Cdd:pfam20178  444 RLWRPDLSPYEHGVALPATLLPDATGLYRHEGRQWLPLDGRVYEVRPDPDDGAWRIRHPSRPDAYEPLLRHNGAGAWRHE 523
                          570       580       590       600       610       620
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 567350802   590 HEQPGQWPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQR 651
Cdd:pfam20178  524 LEQPAEWEGTALFRRLGPDTAGLSDATADRALQASGTSEAVLRRLHVEHQPPPALLLDTLQR 585
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
971-1156 2.38e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 2.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  971 LAIRPILNAWRRLSTITLEGGGRLHSLDLSGLDLDNQALASLALPDDFTHVQHLSLSYNPSLSQLpaefherfPNLNRLL 1050
Cdd:COG4886    48 LLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--------TNLESLD 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1051 LTDCRFDTVP-HLGSPEQLAWLDLEGNRItwsTQAQQALDRYPGLSVLDLSGNPLLEAPD-LRGLAYLRTLFLNDCALSE 1128
Cdd:COG4886   120 LSGNQLTDLPeELANLTNLKELDLSNNQL---TDLPEPLGNLTNLKSLDLSNNQLTDLPEeLGNLTNLKELDLSNNQITD 196
                         170       180
                  ....*....|....*....|....*...
gi 567350802 1129 LPQGLDQMIEPIILDIGDNQLLRLPDGF 1156
Cdd:COG4886   197 LPEPLGNLTNLEELDLSGNQLTDLPEPL 224
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
982-1237 4.39e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 66.50  E-value: 4.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  982 RLSTITLEGGG--RLHSLDLSgldlDNQaLASLALP-DDFTHVQHLSLSYNPsLSQLPAEFhERFPNLNRLLLTDCRFDT 1058
Cdd:COG4886   170 QLTDLPEELGNltNLKELDLS----NNQ-ITDLPEPlGNLTNLEELDLSGNQ-LTDLPEPL-ANLTNLETLDLSNNQLTD 242
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1059 VPHLGSPEQLAWLDLEGNRITWSTQAQQAldryPGLSVLDLSGNPLLEApdlrGLAYLRTLFLNDCALSELPQGLDQMIE 1138
Cdd:COG4886   243 LPELGNLTNLEELDLSNNQLTDLPPLANL----TNLKTLDLSNNQLTDL----KLKELELLLGLNSLLLLLLLLNLLELL 314
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1139 PIILDIGDNQLLRLPDGFNVPRPVANALRLESEWLGSPVLAQIEAYNAMHQVDLLVCEGDYLEFFEQTGPAELALWQRLP 1218
Cdd:COG4886   315 ILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLL 394
                         250
                  ....*....|....*....
gi 567350802 1219 LQYRRDLRPLLELEPFVSR 1237
Cdd:COG4886   395 TTTAGVLLLTLALLDAVNT 413
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
356-871 3.73e-07

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 54.88  E-value: 3.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  356 PWQRAAQADLRPTRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAFFIPGAGTL 435
Cdd:COG3321   867 PFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAALLALA 946
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  436 MLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRYRLWNED 515
Cdd:COG3321   947 AAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAA 1026
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  516 LTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQHEQPGQ 595
Cdd:COG3321  1027 LLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAALAAAL 1106
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  596 WPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQRMTAQAEVEALADKAPPGLFERFYN 675
Cdd:COG3321  1107 LLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALALAAALA 1186
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  676 GSAPATPATQKLLDAYARLSPALARRLLAPLSEAETFAWQEHSQLPTQVRQLLEQVHSELPLVRALEGVLQPARASSDSE 755
Cdd:COG3321  1187 AALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALAALALLA 1266
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  756 RLLFSALDAMPDWPADLRLELHGASPIGPLLEHVGREQAGTLRRVIKSVEGYEVDRGERPAPAPLDPDLCRAIEQALPRP 835
Cdd:COG3321  1267 AAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAAA 1346
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 567350802  836 HRDTLGITTADGSSLRQRVLGWVDQHREVLAQRLWG 871
Cdd:COG3321  1347 AAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALA 1382
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
7-484 4.16e-05

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 48.33  E-value: 4.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802    7 HQPLLQ--AQLphWARQVTPNqWAALKQTQVA--------PWKRQD----WFANAAPDLREAACASQARLMQAQAALANS 72
Cdd:COG3321   830 LAQLLTalAQL--WVAGVPVD-WSALYPGRGRrrvplptyPFQREDaaaaLLAAALAAALAAAAALGALLLAALAAALAA 906
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802   73 LKGLQQITEFAEPLLQRRLAEHGFHAQLRNSQLLRVKRSWHWAALRYLSSHRRDNLLQAALQNFASDEVFTAESAIALGD 152
Cdd:COG3321   907 ALLALAAAAAAALALAAAALAALLALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAA 986
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  153 NIHVTPIQIQGAVPVGMQVPVAHFPLQSEHYQVERLPLEPAAFATLCRDLDLGKAYQAHLEQHLAQPATRGLAIRVQKDR 232
Cdd:COG3321   987 AAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALA 1066
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  233 LRLAADLAYMRHLLDGSTLDQIERLLRGGTVQCWQLALFGTPLHEVMLIDAGGAGLALYLPGHDPALRQCSNLDAVHDTL 312
Cdd:COG3321  1067 ALLLLAALAELALAAAALALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAA 1146
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  313 ATLLLEPDARQAFTAYIRQDQRTHFLDLLQQNLDATGNTAYERPWQRAAQADLRPTRVAITAEPFGHYQDLHLARLKHEA 392
Cdd:COG3321  1147 AAALALAAAAAALAAALAAALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAA 1226
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  393 SLLAVPTAMADANARARRLDEWENLGLDALNIAAFFIPGAGTLMLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGL 472
Cdd:COG3321  1227 AAAAAALALLALAAAAAAVAALAAAAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAA 1306
                         490
                  ....*....|..
gi 567350802  473 NLALIGGFVAAG 484
Cdd:COG3321  1307 AAAAAAAAAAAA 1318
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
182-706 1.08e-04

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 46.79  E-value: 1.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  182 HYQVERLPLEPAAFATLCRDLDLGKAYQAHLEQHLAQPATRGLAIRVQKDRLRLAADLAYMRHLLDGSTLDQIERLLRGG 261
Cdd:COG3321   855 GRGRRRVPLPTYPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVA 934
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  262 TVQCWQLALFGTPLHEVMLIDAGGAGLALYLPGHDPALRQCSNLDAVHDTLATLLLEPDARQAFTAYIRQDQRTHFLDLL 341
Cdd:COG3321   935 LAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAA 1014
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  342 QQNLDATGNTAYERPWQRAAQADLRPTRVAITAEPFGHYQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDA 421
Cdd:COG3321  1015 AAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAA 1094
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  422 LNIAAFFIPGAGTLMLAVTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQ 501
Cdd:COG3321  1095 LALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALL 1174
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  502 VRGSDGRYRLW-----NEDLTPYRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQP 576
Cdd:COG3321  1175 LALALALAAALaaalaGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAA 1254
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  577 PLAHNAQGAWRGQHEQPGQWPFAKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQRMTAQA 656
Cdd:COG3321  1255 LLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALA 1334
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|
gi 567350802  657 EVEALADKAPPGLFERFYNGSAPATPATQKLLDAYARLSPALARRLLAPL 706
Cdd:COG3321  1335 AAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAA 1384
PksD COG3321
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
359-899 5.61e-04

Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442550 [Multi-domain]  Cd Length: 1386  Bit Score: 44.48  E-value: 5.61e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  359 RAAQADLRPTRVAITAEPFGHyQDLHLARLKHEASLLAVPTAMADANARARRLDEWENLGLDALNIAAffipGAGTLMLA 438
Cdd:COG3321   850 SALYPGRGRRRVPLPTYPFQR-EDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAA----AALALAAA 924
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  439 VTACQLLGEAFEGYQAWHEGDRHLALRHLEAVGLNLALIGGFVAAGKVVPKLFNSPLMESLQQVRGSDGRYRLWNEDLTP 518
Cdd:COG3321   925 ALAALLALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALAL 1004
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  519 YRSAVTLPQTLQPNALGQYLYQGRYFIRMDGQLFEQRFDHNLQQWRAIHPDTPDAWQPPLAHNAQGAWRGQHEQPGQWPF 598
Cdd:COG3321  1005 LAAAALLLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAAL 1084
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  599 AKLARRLGEAYTAFTPEQLAKAGRLCGIDAARLRRVHLEGQPTPPLLLDTLQRMTAQAEVEALADKAPPGLFERFYNGSA 678
Cdd:COG3321  1085 ALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALA 1164
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  679 PATPATQKLLDAYARLSPALARRLLAPLSEAETFAWQEHSQLPTQVRQLLEQVHSELPLVRALEGVLQPARASSDSERLL 758
Cdd:COG3321  1165 AALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAA 1244
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  759 FSALDAMPDWPADLRLELhgASPIGPLLEHVGREQAGTLRRVIKSVEGYEVDRGERPAPAPLDPDLCRAIEQALPRPHRD 838
Cdd:COG3321  1245 VAALAAAAAALLAALAAL--ALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALA 1322
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 567350802  839 TLGITTADGSSLRQRVLGWVDQHREVLAQRLWGHRALLRKPMGNLRGGRPLDPEPPQPRLA 899
Cdd:COG3321  1323 AALLAAALAALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAA 1383
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
997-1156 6.24e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 43.77  E-value: 6.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802  997 LDLSGLDLDNQALASLALPDDFTHVQHLSLSYNPSLSQLPAEFHERFPNLNRLLLTDCRFDTVPHLGSPEQLAWLDLEGN 1076
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 567350802 1077 RITWSTQAQQALDRYPGLSVLDLSGNPLLEapdlrGLAYLRTLFLNDCALSELPQGLDQMIEPIILDIGDNQLLRLPDGF 1156
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPL 155
LRR_8 pfam13855
Leucine rich repeat;
1044-1104 6.75e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 6.75e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 567350802  1044 PNLNRLLLTDCRFDTVP--HLGSPEQLAWLDLEGNRITwsTQAQQALDRYPGLSVLDLSGNPL 1104
Cdd:pfam13855    1 PNLRSLDLSNNRLTSLDdgAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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