|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-287 |
1.87e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 364.53 E-value: 1.87e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00112 39 AIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00112 119 LQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00112 199 KLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPT 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRFQPKSNTLP 287
Cdd:MTH00112 279 ATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKNTLT 325
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-287 |
1.28e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 357.19 E-value: 1.28e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00135 39 AIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVyHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00135 119 LQGLDLTTGLILSTWQKLAPFALILQI-APTNPTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSP 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00135 198 SLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLT 277
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRFQPKSNTLP 287
Cdd:MTH00135 278 ATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTLP 324
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-286 |
2.18e-115 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 336.12 E-value: 2.18e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00070 39 AIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00070 119 LQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00070 199 HLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTL 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRFQPKSNTL 286
Cdd:MTH00070 279 ATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNL 324
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-286 |
1.26e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 331.81 E-value: 1.26e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00105 39 AIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00105 119 TQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00105 199 TLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIIL 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRFQPKSNTL 286
Cdd:MTH00105 279 PTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENTKPMT 324
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-286 |
2.23e-87 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 264.91 E-value: 2.23e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00200 39 AIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00200 119 LQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00200 199 NLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIY 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRFQPKSNTL 286
Cdd:MTH00200 279 ATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLL 324
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-278 |
3.54e-80 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 246.77 E-value: 3.54e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00041 39 SIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP 160
Cdd:MTH00041 119 LQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 161 NIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTST 240
Cdd:MTH00041 199 NASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILI 278
|
250 260 270
....*....|....*....|....*....|....*...
gi 564732273 241 ATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWR 278
Cdd:MTH00041 279 SIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWR 316
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
2-276 |
6.17e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 178.86 E-value: 6.17e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 2 IIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWqtgtwdISQLTNQPACILLTMALAMKLGLTPLHFWLPEVL 81
Cdd:MTH00160 41 FIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 82 QGTTLKTALIIATWQKLAPaalLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPN 161
Cdd:MTH00160 115 EGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISEN 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 162 IMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTSTA 241
Cdd:MTH00160 192 LWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLL 271
|
250 260 270
....*....|....*....|....*....|....*
gi 564732273 242 TVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHK 276
Cdd:MTH00160 272 FILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK 306
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-279 |
3.59e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 168.91 E-value: 3.59e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 1 AIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISqltnqpacILLTMALAMKLGLTPLHFWLPEV 80
Cdd:MTH00144 39 GFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSV 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAP-AALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTIN 159
Cdd:MTH00144 111 MAGLSWLSCFLLLTWQKVAPlFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 160 PNIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLmSMGGLPPLTGFIPKWLILQELTTHNLTS 239
Cdd:MTH00144 191 SWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISLLL-SLGGLPPFLGFCSKLLVLISSMESSPLL 269
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 564732273 240 TATVLALSALLSLFFYLRLSYTSTLTVFPTTTKNTHKWRF 279
Cdd:MTH00144 270 LILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLN 309
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
3-233 |
8.52e-43 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 149.54 E-value: 8.52e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 3 IPIIAKQHNPRATEATTKYFLTQAAASATILFASTInawqtgTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEVLQ 82
Cdd:MTH00011 43 VPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMS 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 83 GTTLKTALIIATWQKLAPAALLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI 162
Cdd:MTH00011 117 SISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSM 196
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564732273 163 MLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELT 233
Cdd:MTH00011 197 AILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLT 267
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
3-262 |
5.25e-36 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 131.72 E-value: 5.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 3 IPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISqltnqpaCILLTMALAMKLGLTPLHFWLPEVLQ 82
Cdd:MTH00197 35 IPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS-------VVLVILGLLLKLGAFPFHFWVPSVME 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 83 GTTLKTALIIATWQKLAPaaLLYLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI 162
Cdd:MTH00197 108 SLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 163 MLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTSTAT 242
Cdd:MTH00197 186 FMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITF 265
|
250 260
....*....|....*....|
gi 564732273 243 VLALSALLSLFFYLRLSYTS 262
Cdd:MTH00197 266 MLILSTCFSLYYYLSLAYKS 285
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
11-230 |
2.73e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 2.73e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 11 NPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQP-----------ACILLTMALAMKLGLTPLHFWLPE 79
Cdd:pfam00361 28 SPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssglllLFLLILVGFLFKSAQVPFHTWLPD 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 80 VLQGT-TLKTALIIATWQKLAPAALL--YLVYHSTNPT---ILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:pfam00361 108 AYEGApTPVSALLAATLVKAGGYGLIrrSLLYLPSSPFiqqILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYML 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 154 TILTINPNI----MLLNLALYILMTTPLFLALML-----TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIP 224
Cdd:pfam00361 188 IALGAGTIYgiqaAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLG 267
|
....*.
gi 564732273 225 KWLILQ 230
Cdd:pfam00361 268 KFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-232 |
1.66e-27 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 110.98 E-value: 1.66e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 10 HNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQL--------TNQP----ACILLTMALAMKLGLTPLHFWL 77
Cdd:COG1007 147 DDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaalaaggANSPllllGLVLVLAGLAFKLSAVPFHMWT 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 78 PEVLQGTTLKTALIIATWQKLAPAALLYLVYHSTNP-------TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLG 150
Cdd:COG1007 227 PDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPglaadwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 151 WMVTILTINPNI----MLLNLALYILMTTPLFLALMLTASK-----TIKDLTTTWTISPPITTMILMLLMSMGGLPPLTG 221
Cdd:COG1007 307 YLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILLLSRKggeaeEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAG 386
|
250
....*....|.
gi 564732273 222 FIPKWLILQEL 232
Cdd:COG1007 387 FFGKFYVFSAA 397
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-230 |
4.33e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 109.91 E-value: 4.33e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 11 NPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPA------------CILLTMALAMKLGLTPLHFWLP 78
Cdd:PRK05777 149 RRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 79 EVLQGTTLKTALIIATWQKLAP-AALLYLVY------HSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGW 151
Cdd:PRK05777 229 DVYEGAPTPVTAFLATAPKIAAfAVLLRLLVvafgglSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGY 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 152 MVTILTINPNI----MLLNLALYILMTTPLFLALMLTASK-----TIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGF 222
Cdd:PRK05777 309 LLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVISLLRRKggeaeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGF 388
|
....*...
gi 564732273 223 IPKWLILQ 230
Cdd:PRK05777 389 WGKFYVFE 396
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-258 |
5.97e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 101.18 E-value: 5.97e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 13 RATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQ--------PAC----ILLTMALAMKLGLTPLHFWLPEV 80
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFlsngmlniSLLllgiVLILVGLLFKLSAVPFHMWVPDV 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALL-------YLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:TIGR01770 230 YEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYIL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 154 TILTINPNI----MLLNLALYILMTTPLFLALMLTAS------KTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFI 223
Cdd:TIGR01770 310 IGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSykdewiEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFF 389
|
250 260 270
....*....|....*....|....*....|....*
gi 564732273 224 PKWLILQELTTHNLTSTATVLALSALLSLFFYLRL 258
Cdd:TIGR01770 390 GKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-229 |
3.30e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.94 E-value: 3.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 8 KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI----SQLTNQPACILLTMALAMKLGLTPLHFWLPEVLQG 83
Cdd:MTH00199 140 KRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEG 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 84 TTLKTALIIATWQKLAPAALLYLVYHSTNptILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPN-- 161
Cdd:MTH00199 220 APTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFes 297
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564732273 162 --IMLLNLALYILMTTPLF---LALMLTaSKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLIL 229
Cdd:MTH00199 298 iqASLIYMIIYVIMSICSFsiiLSLKLT-KGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
3-236 |
1.30e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 96.25 E-value: 1.30e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 3 IPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDIS--QLTNQPAC-----------ILLTMALAMKLG 69
Cdd:MTH00196 31 ILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSyiNLVLNSGQsfssvsvpigyLLIIVALLFKLS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 70 LTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALLYLVyhSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANL 149
Cdd:MTH00196 111 VAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHM 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 150 GWMVTILTINP----NIMLLNLALYILMTtpLFLALMLTASKTIKDLTTTWT----ISPPITTMILMLLMSMGGLPPLTG 221
Cdd:MTH00196 189 GFVLWGIEIGSfesiQASLVYLFIYIIMS--ICVFSIILALNVYKNLIIEFSglsrRLPILAITLALTFLSIAGIPPLVG 266
|
250
....*....|....*
gi 564732273 222 FIPKWLILQELTTHN 236
Cdd:MTH00196 267 FLGKWLILLSGVVYQ 281
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
4-230 |
2.15e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.37 E-value: 2.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 4 PIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTN----------QPACILLTMALAMKLGLTPL 73
Cdd:COG0651 145 GLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLLVGFGIKAALFPL 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 74 HFWLPE-----------VLQGTTLKTAL--IIATWQKLAPAALLYLVyhstnPTILLMMGILSTIVGGWGGLNQTQMRKI 140
Cdd:COG0651 225 HFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFL-----GTLLLVLGLLTMLVGALGALAQRDLKRL 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 141 MAFSSIANLGWMVTILTINPNIMLLNLALYI----LMTTPLFLA----LMLTASKTIKDLTTTWTISPPITTMILMLLMS 212
Cdd:COG0651 300 LAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALA 379
|
250
....*....|....*...
gi 564732273 213 MGGLPPLTGFIPKWLILQ 230
Cdd:COG0651 380 LAGLPPLSGFVSKWLLLQ 397
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
13-225 |
1.38e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 79.66 E-value: 1.38e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 13 RATEATTKYFLTQAAASATILFAST----INAWQTGTWDI------SQLTNQPAC----ILLTMALAMKLGLTPLHFWLP 78
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSwlygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 79 EVLQGTTLKTALIIATWQKLAPAAL----LYLVYHSTNP---TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGW 151
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALatriFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 152 -MVTILTINPNI----MLLNLALYILMTTPLFLALMLTASKT----IKDLTTTWTISPPITTMILMLLMSMGGLPPLTGF 222
Cdd:CHL00049 319 vIIGIIVGDSNDgyasMITYMLFYIFMNLGTFACIVLFGLRTgtdnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 564732273 223 IPK 225
Cdd:CHL00049 399 FGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
11-225 |
1.66e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 73.55 E-value: 1.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 11 NPRATEATTKYFLTQAAASATILFAST----INAWQTGTWDISQLTNQPACILLTMAL-------AMKLGLTPLHFWLPE 79
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALALITSPSLGLALALvfviagiAFKISAVPFHQWTPD 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 80 VLQGTTLKTALIIATWQKLAPAAL----LYLVYHSTNP---TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWM 152
Cdd:PRK02504 236 VYEGSPTPVVAFLSVGSKAAGFALairlLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 153 VTILTINPN----IMLLNLALYILMTTPLFLALML----TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIP 224
Cdd:PRK02504 316 MIGLVAGTEagyaSMVFYLLAYLFMNLGAFACVILfslrTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 564732273 225 K 225
Cdd:PRK02504 396 K 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-241 |
9.60e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 71.18 E-value: 9.60e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 13 RATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQ-----------PACILLTMALAMKLGLTPLHFWLPE-- 79
Cdd:PRK08668 144 ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGlindtstgfalIVFLFLLAFGVAKAGIFPLHVWAPDay 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 80 ---------VLQGTTLKT-ALIIATWQKLAPAALLYL---VYHSTnPT---ILLMMGILSTIVGGWGGLNQTQMRKIMAF 143
Cdd:PRK08668 224 seapqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSefgTYRGV-PLfnyILAWLGNISIIVGTLMAILQEDIKKLIAY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 144 SSIANLGWMVTILTINPNIMLLNlALYILMTTPLFLALMLTASKTIKDLTTTWTISP--------PIT-TMILMLLMSMG 214
Cdd:PRK08668 303 SSVANGGYILVGLGLGTSLGFAG-GLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEmggliekmPFTfAMYLVAIISLA 381
|
250 260
....*....|....*....|....*..
gi 564732273 215 GLPPLTGFIPKWLILQELTTHNLTSTA 241
Cdd:PRK08668 382 GIPPMSGFASKWLIFEALISKGMPITA 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-232 |
1.50e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 70.68 E-value: 1.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 4 PIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQP--------ACILLTMALAMKLGLTPLHF 75
Cdd:PRK08375 144 ALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLALALKAAVFPLHT 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 76 WLPEVLQGTT-LKTALIIATWQKLAPAALLYLVYH---------STNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSS 145
Cdd:PRK08375 224 WLPRAYPAAPpVVTALLSGLVTKVAVYALIRIYFTvfggdfrfaLGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 146 IANLGWMVTILTINPNIMLLNLALYI----LMTTPLFLAL----MLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLP 217
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
250
....*....|....*
gi 564732273 218 PLTGFIPKWLILQEL 232
Cdd:PRK08375 384 PTSGFVSKWYLVVGA 398
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-225 |
1.92e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 67.64 E-value: 1.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 42 QTGTWDISQLTNQP-------ACILLTMALAM-KLGLTPLHFWLPEVLQGTTLKTALIIAtwqklapAAL----LYLV-- 107
Cdd:PRK12644 183 AAGTYRLSELLADPptgpavsVAVVLILVGALsKSAIVPFHFWLPGAMAAPTPVSAYLHA-------AAMvkagIYLVar 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 108 ----YHSTNP--TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTI-NPNIMLLNLALYI---LMTTPL 177
Cdd:PRK12644 256 lapgFADVPVwrPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMLLahaLFKAAL 335
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 564732273 178 FLALML----TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPK 225
Cdd:PRK12644 336 FLVVGIidhsTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
58-229 |
3.42e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 63.72 E-value: 3.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 58 ILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALLY-LVYHSTnptILLMMGILSTIVGGWGGLNQTQ 136
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTsLVITSK---LLLSVAIISLVVGAFGALNQTR 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 137 MRKIMAFSSIANLGWMVTILTINPNIMLLNLALYI---LMTTPLFLALMLTAS----------------------KTIKD 191
Cdd:MTH00198 380 IKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALASFTVICTLEefgtrtptsrqrdgsfgnynlvRRLVD 459
|
170 180 190
....*....|....*....|....*....|....*...
gi 564732273 192 LTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLIL 229
Cdd:MTH00198 460 LTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-228 |
4.08e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 4.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 12 PRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQL----------TNQPACILLTMALAMKLGLTPLHFWLPEVL 81
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavkmsenptvVAKIALALFIAGLAMKSGAVPVHMWLPDAY 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 82 QG--TTLKTALIIATWQKL-APAALLYLVYH-----STNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWM- 152
Cdd:PRK08376 248 PAapSSISAMLLVIKQAGLyALARVLFSIYGpainlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMl 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 153 ----VTILTINPNIM------LLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISP--------PITTMILML-LMSM 213
Cdd:PRK08376 328 lglgVGLAALGDPAMasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNElgglartmPKTTIAFLIgAAAI 407
|
250
....*....|....*
gi 564732273 214 GGLPPLTGFIPKWLI 228
Cdd:PRK08376 408 VGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
17-229 |
2.06e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.25 E-value: 2.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 17 ATTKYFLTQAAASATILFASTINAWQTG--TWDISQLTNQP--------ACILLTMALAMKLGLTPLHFWLPEVL-QGTT 85
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPlpltaqllLFLAFFIAFAVKVPMFPFHTWLPDAHvEAPT 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 86 LKTALIIATWQK------------LAPAALLYLVYhstnptILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:COG1008 242 AGSVLLAGVLLKmggygllrfalpLFPEASAYFAP------LLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 154 T-ILTINPN----IMLLNLAlYILMTTPLFLAL-ML---TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIP 224
Cdd:COG1008 316 LgIFALNPLglqgAVLQMVS-HGLITAALFLLVgVLydrTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
....*
gi 564732273 225 KWLIL 229
Cdd:COG1008 395 EFLVL 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
58-230 |
4.41e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.96 E-value: 4.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 58 ILLTMALAMKLGLTPLhFWLPEVLQG-TTLKTALIIATWQKLAPAALL----YLVYHSTNPT--ILLMMGILSTIVGGWG 130
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTpNTEVAALFAALLTKVGIYALIrvftLLFPQERELLhpLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 131 GLNQTQMRKIMAFSSIANLGWMVTILTINpNIMLLNLALY-----ILMTTPLFLAL----MLTASKTIKDLTTTWTISPP 201
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFylvhdMVVKTALFLIAgslvRLTGYRSLQYLGGLYRKEPL 368
|
170 180
....*....|....*....|....*....
gi 564732273 202 ITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
17-230 |
8.39e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.18 E-value: 8.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 17 ATTKYFLTQAAASATILFASTINAWQTG-TWDISQLTNQP--------ACILLTMALAMKLGLTPLHFWLPEV-LQGTTL 86
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPlpfgvqtwLFLAFFIAFAVKVPLFPLHTWLPDAhVEAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 87 KTALIIATWQKLAPAALLYL---------VYHStnpTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGW-MVTIL 156
Cdd:TIGR01972 237 GSVILAGVLLKMGTYGFLRFnlplfpdasLYFA---PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 157 TINPNIMLLNLALYI---LMTTPLFLALML----TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLIL 229
Cdd:TIGR01972 314 SFNELGISGAVFQMIshgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
.
gi 564732273 230 Q 230
Cdd:TIGR01972 394 L 394
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
58-233 |
1.84e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 58.43 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 58 ILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALL---YLVYHSTNPTILLM--MGILSTIVGGWGGL 132
Cdd:MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsFPLFEKAPLTLLIItiFGALTAFFAATVGL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 133 NQTQMRKIMAFSSIANLGWMVTILTINPNimlLNLALYILMTTPLFLALM-LTASKTIKDLTTT---------WTISPPI 202
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMVLIIGIEGS---HNVGLFHLVNHAFFKALLfLSAGSVIHSTTVDeqdmrkmggLIHSIPF 385
|
170 180 190
....*....|....*....|....*....|..
gi 564732273 203 T-TMILMLLMSMGGLPPLTGFIPKWLILqELT 233
Cdd:MTH00032 386 TyTMMLIGSFSIMGLPYLTGFYSKDLIL-ELT 416
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
40-239 |
3.56e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 3.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 40 AWQTGTWDISQLTNQ-----------PACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIAtwqklapA------- 101
Cdd:COG1009 186 GAIAGTLNFSELLAAaptilssplltLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHA-------Atmvkagv 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 102 ---ALLYLVYHSTNP--TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTP 176
Cdd:COG1009 259 yllARLSPLFALSPVwlTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG----AYVAALFHLLTHA 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564732273 177 LFLALML---------TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTS 239
Cdd:COG1009 335 FFKALLFlgagsvihaTGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLG 406
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
57-230 |
7.49e-09 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 56.62 E-value: 7.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 57 CILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALL-----YLVYHSTNPTILLMMGILSTIVGGWGG 131
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirsspLFEQAPLALIIVTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 132 LNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALM-LTASKTIKDLTTTWTIS---------PP 201
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLS----HYSISLFHLMNHAFFKALLfLSAGSVIHALSDEQDMRkmgglisflPL 368
|
170 180
....*....|....*....|....*....
gi 564732273 202 ITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-229 |
7.51e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.28 E-value: 7.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 54 QPACILLTMALAMKLGLTPLHFWLPEV-----------LQGTTLKTA--LIIATWQKLAPAALLYLVYHSTNptILLMMG 120
Cdd:PRK12662 209 QIGVLFIMVGLFIKAALFPFHKWLIQAyseapsfisvfFSGTSTKVMiyLIIRIVYDVFKANFVFTTLPFNN--VFMILA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 121 ILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMLTA--------SKTIKDL 192
Cdd:PRK12662 287 ALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSgsisyhfgTTKLEDC 366
|
170 180 190
....*....|....*....|....*....|....*..
gi 564732273 193 TTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLIL 229
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
33-229 |
2.97e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 33 LFASTINAWQ-TGTWDISQLTNQ-----------PACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTA-LIIATWQKla 99
Cdd:PRK12647 162 LLAGLILLGNvTGTYSLSELLASgdvirehplylAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAyLHSATMVK-- 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 100 paALLYLVYHsTNP---------TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALY 170
Cdd:PRK12647 240 --AGIYLLAR-LNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLF 316
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564732273 171 ILMTTPLFLALMLTASkTIKDLTTTWTISP--------PITTMILMLL-MSMGGLPPLTGFIPKWLIL 229
Cdd:PRK12647 317 LVAHSLYKGALFMVAG-IIDHETGTRDITKlgglrramPITAAAALLAaLSMAGLPPLFGFLAKELIY 383
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-230 |
4.96e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.82 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 58 ILLTMALAMKLGLTPLHFWLPE-----------VLQGTTLKTAL--IIATWQKLAPaallylvyHSTNPTILLMMGILST 124
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVyaIIRTHTLLFP--------GGGLDTLLMVVALLTM 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 125 IVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALY----ILMTTPLFLALML----TASKTIKDLTTTW 196
Cdd:PRK12665 285 VVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFLVVGLierqAGSSSLRRLGGLA 364
|
170 180 190
....*....|....*....|....*....|....
gi 564732273 197 TISPPITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:PRK12665 365 KASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-261 |
5.97e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 53.44 E-value: 5.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 5 IIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLT----------------NQPACILLTMALAM-- 66
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSakirglsfpltgglagNPPLALGVALALALwa 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 67 ---KLGLTPLHFWLPEV-----------LQGTTLKTALIiatwqklAPAALLYLVYHSTNPT---------ILLMMGILS 123
Cdd:PRK12667 233 ftiKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVGAY-------AIIRFLYTIFGISPSLidfraalspILIILGAVS 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 124 TIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYIL----MTTPLFLA----LMLTASKTIKDLTTT 195
Cdd:PRK12667 306 AIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiAKSLLFLAsgvfIHAAGTRDIDELAGL 385
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564732273 196 WTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTSTATVLALSALLSLFFYLRLSYT 261
Cdd:PRK12667 386 GRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
57-233 |
6.61e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 53.47 E-value: 6.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 57 CILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATwqkLAPAALLYLVYHS-----TNPTILLMMGI---LSTIVGG 128
Cdd:MTH00210 214 CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAA---TMVTAGVFLIIRSgplfeGSPLALTIVTIlgaLTAFFAA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 129 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPnimlLNLALYILMTTPLFLALM-LTASKTIKDLTTTWTI--------S 199
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMVCGISN----YSTSLFHLMNHAFFKALLfLSAGSVIHAVSDEQDMrkmgglikS 366
|
170 180 190
....*....|....*....|....*....|....*
gi 564732273 200 PPIT-TMILMLLMSMGGLPPLTGFIPKWLILqELT 233
Cdd:MTH00210 367 IPFTyVMILIGSLSLMGFPYLTGFYSKDLIL-ELT 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
31-225 |
1.18e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.12 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 31 TILFASTINAWQTGTWDISQLTNQPA-----------CILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLA 99
Cdd:PRK12650 174 TLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKA 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 100 PAALLYL---VYHStNPT---ILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIML----LNLAL 169
Cdd:PRK12650 254 GIYLLLRfspVFHD-VAVwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALtaavVHTLA 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564732273 170 YILMTTPLFlalML-------TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPK 225
Cdd:PRK12650 333 HALFKSSLF---MLigvvdhqAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
43-233 |
1.65e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.45 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 43 TGTWDISQLTNQ-----------PACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALLY-----L 106
Cdd:PRK12646 188 TGTNNITEILGQadhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 107 VYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPN-------------IMLLNLALYILM 173
Cdd:PRK12646 268 GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGyaqhqqdaiasiyVFVLFAALFHLM 347
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564732273 174 TTPLFLALML---------TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELT 233
Cdd:PRK12646 348 NHAIFKCALFmgvgiidheAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALT 416
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
41-230 |
2.92e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 51.75 E-value: 2.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 41 WQT-GTWDISQLTNQPACILL--------TMALAMKLGLTPLHFWLPEV-LQGTTLKTALIIATWQKLAPAALLYLVYHS 110
Cdd:PRK08042 158 WQRyGTLDLRLLDMRMQQLPLgsdiwllgVIGFGLLAGIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLG 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 111 TNP-----TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLG--------WMVTILTINPNIMLLNL--ALYILMTT 175
Cdd:PRK08042 238 GNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLvgGLYHLLNH 317
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564732273 176 PLFLALML---------TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:PRK08042 318 SLFKSVLFlgagsvwfrTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
5-232 |
3.41e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 48.35 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 5 IIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQP--------ACILLTMALAMKLGLTPLHFW 76
Cdd:PRK06521 153 VIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHlspfwaslVFLLALFGFGAKAGLVPLHVW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 77 LPE-----------VLQGTTLKTAL--IIATWQKLAPAALLYLVYhstnptILLMMGILSTIVGGWGGLNQTQMRKIMAF 143
Cdd:PRK06521 233 LPRahpaapshvsaLMSGVMLKVAIygILRVVFDLLGAPGWWWGV------LVLALGAISAVLGVLYALAEHDLKRLLAY 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 144 SSIANLGW--------MVTILTINPNIMLLNL--ALYILMTTPLFLALMLTASKTIkdLTTTWT---------ISPPITT 204
Cdd:PRK06521 307 STIENIGIifvglglaMVFIAYGMPLLAALALtaALYHLLNHALFKSLLFLGAGAV--LHATGTrdmeklgglIRRMPWT 384
|
250 260 270
....*....|....*....|....*....|
gi 564732273 205 MILMLL--MSMGGLPPLTGFIPKWLILQEL 232
Cdd:PRK06521 385 AWAFLIgcLAISALPPLNGFVSEWLLLQSL 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
17-150 |
5.43e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.72 E-value: 5.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 17 ATTKYFLTQAAASATILFASTINAWQTG--TWDISQLTNQPACILLTM--------ALAMKLGLTPLHFWLPE------- 79
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSYPLALELllyagfliAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564732273 80 ----VLQGTTLKT---ALIIATWQKLaPAALLYLVyhstnpTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLG 150
Cdd:PRK12561 218 pvsmILAGVLLKMggyALIRFNVQML-PDAHVYFA------PALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
67-230 |
5.86e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 47.62 E-value: 5.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 67 KLGLTPLHFWLPE-----------VLQGTTLKTAL-IIATWQKLAPAALlylvyHSTNPTILLM-MGILSTIVGGWGGLN 133
Cdd:PRK06458 227 KVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYYILIDAAI-----GSDFPGRLLLiFGLLSVLVAAFFLLR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 134 QTQMRKIMAFSSIANLGWMVTILTINPniMLLNLALYILMT------TPLFLA----LMLTASKTIKDLTTTWTISPPIT 203
Cdd:PRK06458 302 QRDIKRLFAYSSIEHMGLIAFALGIGG--PLGIFAALLHMLnhsltkSAIFFAsgnvLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180
....*....|....*....|....*..
gi 564732273 204 TMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
62-227 |
6.14e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 47.22 E-value: 6.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 62 MALAMKLGLTPLHFWLPEV-LQGTTLKTALIIATWQKLAPAALLYLVY-------HSTNPTIlLMMGILSTIVGGWGGLN 133
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWpilplgaQNLAPAV-IAMGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 134 QTQMRKIMAFSSIANLGwMVTILTINPNIMLLNLALYILMTTPLFLALMLTASKTIKDLTTT--------WTISPPI-TT 204
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTrlikyyrgLSITMPIwGT 395
|
170 180
....*....|....*....|...
gi 564732273 205 MILMLLMSMGGLPPLTGFIPKWL 227
Cdd:MTH00226 396 IMIVTSLANVAVPPSGNFIGEYL 418
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
56-229 |
1.50e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 46.12 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 56 ACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATwqkLAPAALLYLVYHST-----NPTILLMMGILSTIV---G 127
Cdd:TIGR01974 215 ICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAA---TMVTAGVYLVARTSplfelSPTALYLVTIIGAITalfA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 128 GWGGLNQTQMRKIMAFSSIANLGWMVTILTINPnimlLNLALYILMTTPLFLALMLTAS----------KTIKDLTTTWT 197
Cdd:TIGR01974 292 ATVALVQNDIKRILAYSTMSQLGYMFLALGVGA----YAAAIFHLMTHAFFKALLFLGAgsvihamhheQDIRKMGGLRK 367
|
170 180 190
....*....|....*....|....*....|....
gi 564732273 198 ISPpiTTMILMLL--MSMGGLPPLTGFIPKWLIL 229
Cdd:TIGR01974 368 KMP--VTYITFLIgsLALIGFPGFAGFFSKDLIL 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
9-225 |
2.14e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.98 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 9 QHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPAC--------------ILLTMALAMKLGLTPLH 74
Cdd:PRK12649 155 RHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitlILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 75 FWLPEVLQGTTLKTALI-IATWQK--LAPAALLYLVYHSTNPTILLM--MGILSTIVGGWGGLNQTQMRKIMAFSSIANL 149
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLhSATMVKagVYLVARIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 150 GWMVTIL---TINPNIMLLNLALYILMTTPLFLALMLTASKTIKDLTTTWTISP--------PITTMILMLL-MSMGGLP 217
Cdd:PRK12649 315 AYLMTMYgytTYHEPGLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKlgglrkemPITFIVASIAaLAMAGIP 394
|
....*...
gi 564732273 218 PLTGFIPK 225
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
42-232 |
2.46e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.49 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 42 QTGTWDISQLTNQPAC-----ILLTMALAMKLGLTPLHFWLPEVLQGT-TLKTALIIATWQKLAPAALLYLVYHSTNPTI 115
Cdd:PRK08667 188 QTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSALMSGVMLKVAVYGLVRFLMDVLSPEL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 116 -----LLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLG--------WMVTILTINPNIMLLNL--ALYILMTTPLFLA 180
Cdd:PRK08667 268 wwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDTLALLALggALFHSLNHALFKS 347
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564732273 181 LMLTASKTIKDLTTTWTI--------SPPITTMILML-LMSMGGLPPLTGFIPKWLILQEL 232
Cdd:PRK08667 348 LLFLTAGSVVHATGTRNIekmgglvkLMPYTSALFLVgAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-230 |
2.65e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.32 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 58 ILLTMALAMKLGLTPLHFWLPEVLQGttlKTALIIATWQKL-------APAALLYLVYHSTNP---TILLMMGILSTIVG 127
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYA---PPIAIAALFGALltkvgvyAIARTFTLFFSHDTSfthYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 128 GWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALY----ILMTTPLFLA----LMLTASKTIKDLTTTWTIS 199
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLLigimIKITGTTDLKKMGGLIKRY 369
|
170 180 190
....*....|....*....|....*....|.
gi 564732273 200 PPITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:PRK07691 370 PVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
44-262 |
3.60e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 45.02 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 44 GTWDISQLTNQPACILLTMALAMKLGLT-----PLHFWLPEVLQGTTLKTALIIATWQKLAPAALLYLVYHSTNPT---- 114
Cdd:MTH00209 160 GNWNIFYLNFNSNLGSVISVLIVLAAMTksaqiPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpffs 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 115 -ILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMLTA-------- 185
Cdd:MTH00209 240 mSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLN----QPELAFFHLITHALFKALLFICagniihsh 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 186 --SKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTTHNLTSTATVLALSALLSLFFY-LRLSYTS 262
Cdd:MTH00209 316 ghSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYsMRLSYFS 395
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
41-153 |
3.75e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 45.01 E-value: 3.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 41 WQTGTWD-------ISQLTNQPA---------CILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPA--- 101
Cdd:PRK07376 198 WATGSFDfdgiadrLSELVSSGAvsgwlalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVflv 277
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 564732273 102 ALLYLVYhSTNPTILLMMGILSTI---VGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:PRK07376 278 ARMYPVF-EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMV 331
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
41-233 |
7.26e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.17 E-value: 7.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 41 WQTGTWDISQLTNQP--ACILLTMALAMKLGLTPLHFWLPEVL-QGTTLKTALIIATWQKLAPAALLYLVYHSTNP-TIL 116
Cdd:PRK07234 169 QANGTFAFSGLATADpeAFALIALGLLVKGGIFVSGLWLPLTHsEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdLIV 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 117 LMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPnimLLNLAlYILMTTPLFLALMLTASKTIKDLtttw 196
Cdd:PRK07234 249 RIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGG---LYALA-HGLVKSTLFLCAGALPSRNFTEL---- 320
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 564732273 197 tISPPITTMILMLL----MSMGGLPPLTGFIPKWLILQELT 233
Cdd:PRK07234 321 -ISQMLGIGKWIPLtmasFSIAGFPLLAGFVSKVLTLKNLL 360
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
32-241 |
9.00e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 43.79 E-value: 9.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 32 ILFASTINAWQTGTWDISQLTNQPACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALLYLVYH-- 109
Cdd:MTH00211 182 VWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPlf 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 110 STNPTILLMM---GILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNImllnLALYILMTTPLFLALMLTAS 186
Cdd:MTH00211 262 QNNQLILGAVlllGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQ----LAFLHICTHAFFKAMLFMCS 337
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564732273 187 ----------KTIKDLTTTWTISPpiTTMILMLL--MSMGGLPPLTGFIPKWLILQELTTHNLTSTA 241
Cdd:MTH00211 338 gsiihglnneQDIRKMGGLSKNLP--FTSSCLFLgsLALMGFPFLSGFFSKDLILESMNGSYLNAWA 402
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-230 |
1.14e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 43.60 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 44 GTWDISQLTNQPACILLTMAL---AM-KLGLTPLHFWLPEVLQGTTLKTALIIATWQKLAPAALLYLVY---HSTN--PT 114
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYpflSSTYwfNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 115 ILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMLTASKTI----- 189
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLG----MPKLALFHLITHALFKALLFVCAGSLihshh 320
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 564732273 190 --KDLTT---TWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQ 230
Cdd:MTH00207 321 hsQDLRTmgnLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
22-232 |
1.36e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.24 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 22 FLTQAAASATILFASTINAW-QTGTWDISQLTNQPACILLTMALAMKLGLTPLHF--WLPE-----------VLQGTTLK 87
Cdd:PRK06459 125 FMAFGELSTVLILAGFAWAFiISGTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIahgnapsnfsaILSATMTL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 88 TAL--IIATWQKLAPAALLYLVYhstnptILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTIL--------- 156
Cdd:PRK06459 205 MGVygILKMTILTQTIPIGYFGL------TILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkql 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 157 -TINPNIMLLNLALYI----LMTTPLFLALMLTASKTIKDLTTTWTISPPITTMILMllMSMGGLPPLTGFIPKWLILQE 231
Cdd:PRK06459 279 iTSIEHFSLITVILYSfahsVAKTGLFLSSGLQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLES 356
|
.
gi 564732273 232 L 232
Cdd:PRK06459 357 L 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-241 |
1.96e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.88 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 21 YFLTQAAASATILF--ASTINAWQTGTWDI---SQLTNQPACILLTMALAM--KLGLTPLHFWLPEVLQGTT----LKTA 89
Cdd:PRK06589 170 KYLKILMISALLLFlpAVILIYTKTGNLDFvsgGLFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYpvsaLLHA 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 90 LIIATWQKLAPAALLYLVYHSTNPTILLMMG-------ILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTI---- 158
Cdd:PRK06589 250 VIVVKTGLFCIYKILLYIFGLSYLQRIFAEFnwlifipIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpk 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 159 NPNIMLLNLALYILMTTPLFLAL----MLTASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQELTT 234
Cdd:PRK06589 330 ALGAAILHLVSHSFAKICLFYSMgsiySLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASE 409
|
....*..
gi 564732273 235 HNLTSTA 241
Cdd:PRK06589 410 QNQPWLS 416
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-241 |
2.76e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.14 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 56 ACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTALIIATWQKL--------------APAALLYLVYHstnpTILLMMGI 121
Cdd:PRK12666 212 GAALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFAIMTKVgiyailrlstllfgPEAGASAGFGQ----DWLLPGGL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 122 LSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpNIMLLNLALYILMTTPL-----FL----------------A 180
Cdd:PRK12666 288 ATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLG-NPAATAAALYYLVHSTLaaaalFLladlverqrgaaadrlA 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564732273 181 LMLTASKTIKDLTTTWTISPPITTMILMLL-----MSMGGLPPLTGFIPKWLILQELTTHNLTSTA 241
Cdd:PRK12666 367 VTPELYDLDEEEEEEVGVAIPATMALLGLLfficaLALAGLPPLSGFLGKFALLQALLNPPGAGAA 432
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
17-153 |
2.81e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.11 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 17 ATTKYFLTQAAASATILFA----STINAWQTGTWDISQLTNQP--------ACILLTMALAMKLGLTPLHFWLPEV-LQG 83
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPlppgvqywLFLAFFIAFAVKMPMFPLHTWLPDAhVQA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 84 TTLKTALIIATWQKLA------------PAALLYLVYhstnptILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGW 151
Cdd:PRK05846 242 PTAGSVLLAGILLKMGaygllrfslplfPDASHEFAP------IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
..
gi 564732273 152 MV 153
Cdd:PRK05846 316 VT 317
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
13-230 |
3.81e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 41.94 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 13 RATEATTKYFLTQAAASATILFASTINAWQTGTWDISQ----LTNQPACILLTMALAMKL-------GLTPLHFWLPEVL 81
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnaLLVNPTSPVIYGGLLLLIfgllygsGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 82 QGTTLKTALIIATWQKLAPAALL--------YLVYHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMlvifklfgGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 154 TILTINPNIM----LLNLALYILMTTPLFLALMLTASKT----IKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPK 225
Cdd:PRK06277 307 AGLALGTPLGivagIFHAINHVIYKSALFLGAGIVSYRTktsnLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
....*
gi 564732273 226 WLILQ 230
Cdd:PRK06277 387 LMLAQ 391
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
32-232 |
4.98e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 41.28 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 32 ILFASTINAWQTGTWDISQLTNQP----------ACILLTMALAMKLGLTPLHFWLPEV-LQGTTLKTALIIATWQKLAP 100
Cdd:PRK08676 174 FLFSLTRQALGTGTLNWTELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGI 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 101 AALLYLV-------YHSTNPTILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILM 173
Cdd:PRK08676 254 YGILRLSallrqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLA 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564732273 174 TTPLFLALMLTA--------SKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQEL 232
Cdd:PRK08676 334 HSLVKSGLFFSAgilhrqyrSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
14-229 |
6.97e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 40.91 E-value: 6.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 14 ATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTN----------QPACILLTMALAMKLGLTPLHFWLPEVLQG 83
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQlagtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 84 T----TLKTALIIATWQKLAPAALLYLVYHSTNPT----ILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTI 155
Cdd:PRK08377 236 AphpiTVMFSAFVVKAGLYAMARILYLMQNANGWSsvlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 156 LTINPNIMlLNLALYILMTTPLFLALMLTA---------SKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKW 226
Cdd:PRK08377 316 LALGTQAG-VDAGVFHMINHAIVKALLFLAvgyvgitlgGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKF 394
|
...
gi 564732273 227 LIL 229
Cdd:PRK08377 395 RII 397
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
114-229 |
1.48e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 39.83 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 114 TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALML---------- 183
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLG----MPSLALFHLYTHALFKALLFlcagsiihss 316
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 564732273 184 TASKTIKDLTTTWtISPPITTMILMLL-MSMGGLPPLTGFIPKWLIL 229
Cdd:MTH00151 317 SGTQDIRLLGSLF-LSLPLTSGCLNISsLSLCGAPFLSGFYSKDLIL 362
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
43-242 |
2.11e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.52 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 43 TGTWDISQLTNQ-----------PACILLTMALAMKLGLTPLHFWLPEVLQGTTLKTA-LIIATWQKlapaALLYLV--- 107
Cdd:PRK12645 188 TGSFSIREMIANadeiqnsplfiPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAyLHSATMVK----AGIYLVarf 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 108 ---YHSTNPTILLMMGI-LSTIVggWGGLN---QTQMRKIMAFSSIANLGWMVTILTINP---NIMLLNLALYILMTTP- 176
Cdd:PRK12645 264 tpiFAGSQVWFWTVTLVgLITLF--WGSLNavkQTDLKGILAFSTVSQLGLIMSLLGIGAaslHYQGDDSKIYAAAITAa 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 177 -------------LFLALML----TASKTIKDLTTTWTISPPITTMILMLLMSMGGLPPLTGFIPKWLILQ---ELTTHN 236
Cdd:PRK12645 342 ifhlinhatfkgsLFMIVGIvdheTGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlNATEAN 421
|
....*.
gi 564732273 237 LTSTAT 242
Cdd:PRK12645 422 LFSLDT 427
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
12-153 |
2.24e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 12 PRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTN-----------QPACILLTMALAMKLGLTPLHFWLPEV 80
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAhlaaqgaspslQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564732273 81 LQGTTLKTALIIATWQKLAPAALLY---LVYHSTNP-TILLMMGILSTIVGGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:PRK08168 227 MEAPTPVSALLHAGVVNLGGFVLIRfapLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFML 303
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
39-153 |
6.06e-03 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 38.22 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732273 39 NAWQTGTWDISQLTnqPACILLTMAlAM-KLGLTPLHFWLPEVLQGTTLKTALIIA----TwqklapaALLYLVYHS--- 110
Cdd:PRK06590 204 AAPQFFGLGWSALT--LICLLLFIG-AMgKSAQFPLHTWLPDAMEGPTPVSALIHAatmvT-------AGVYLVARMspl 273
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 564732273 111 --TNPTILLMMGILSTIV---GGWGGLNQTQMRKIMAFSSIANLGWMV 153
Cdd:PRK06590 274 feLSPEALLFVAIVGAVTalfAAFIGLVQTDIKRVLAYSTMSQLGYMF 321
|
|
| |
