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Conserved domains on  [gi|564375640|ref|XP_006247958|]
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mapk-regulated corepressor-interacting protein 1 isoform X1 [Rattus norvegicus]

Protein Classification

FAM195 domain-containing protein( domain architecture ID 10632263)

FAM195 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FAM195 pfam14799
FAM195 family;
4-93 1.33e-30

FAM195 family;


:

Pssm-ID: 464321  Cd Length: 98  Bit Score: 103.93  E-value: 1.33e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375640   4 SPVSRVVY---NGKRNSSPRSPTNSSEIFTPAHEENVRFIYEAWQGVERDLRSQLSSGERCL--VEEYVEKVPNPSLKTF 78
Cdd:pfam14799  1 SSVPRPVFhrvNGKRTHSNPHRHQQQEVITPQHEELIKYIYDSWQEVVRELESDSNGESEGSpsVVYYVEKEPNPSLKDF 80
                         90
                 ....*....|....*
gi 564375640  79 KPIDLSDLKRRNTQD 93
Cdd:pfam14799 81 KPFDLESWWGQRLFN 95
 
Name Accession Description Interval E-value
FAM195 pfam14799
FAM195 family;
4-93 1.33e-30

FAM195 family;


Pssm-ID: 464321  Cd Length: 98  Bit Score: 103.93  E-value: 1.33e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375640   4 SPVSRVVY---NGKRNSSPRSPTNSSEIFTPAHEENVRFIYEAWQGVERDLRSQLSSGERCL--VEEYVEKVPNPSLKTF 78
Cdd:pfam14799  1 SSVPRPVFhrvNGKRTHSNPHRHQQQEVITPQHEELIKYIYDSWQEVVRELESDSNGESEGSpsVVYYVEKEPNPSLKDF 80
                         90
                 ....*....|....*
gi 564375640  79 KPIDLSDLKRRNTQD 93
Cdd:pfam14799 81 KPFDLESWWGQRLFN 95
 
Name Accession Description Interval E-value
FAM195 pfam14799
FAM195 family;
4-93 1.33e-30

FAM195 family;


Pssm-ID: 464321  Cd Length: 98  Bit Score: 103.93  E-value: 1.33e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375640   4 SPVSRVVY---NGKRNSSPRSPTNSSEIFTPAHEENVRFIYEAWQGVERDLRSQLSSGERCL--VEEYVEKVPNPSLKTF 78
Cdd:pfam14799  1 SSVPRPVFhrvNGKRTHSNPHRHQQQEVITPQHEELIKYIYDSWQEVVRELESDSNGESEGSpsVVYYVEKEPNPSLKDF 80
                         90
                 ....*....|....*
gi 564375640  79 KPIDLSDLKRRNTQD 93
Cdd:pfam14799 81 KPFDLESWWGQRLFN 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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