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Conserved domains on  [gi|564246489|ref|XP_006262357|]
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protein O-glucosyltransferase 1 [Alligator mississippiensis]

Protein Classification

glycosyltransferase family protein( domain architecture ID 581341)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_90 super family cl23835
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 45-380 2.20e-132

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


The actual alignment was detected with superfamily member pfam05686:

Pssm-ID: 329112  Cd Length: 396  Bit Score: 384.91  E-value: 2.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   45 CIQENCSCHRSVWKQDLAPFRE-GISKELLSSVvSRKLGTHYQIIDNKLYRE-HDCMFPAR----CSGVEHFILEIIDHL 118
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWREtGITREMVERA-KRKAHFRYVIINGRVYVEtYGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  119 PNMEMVINVRDYPQVPTWM-----KPIIPVFSFSKTSEYRDIMYPAWTFWEggpavWPiyPTGLGRWDQMREDLQRSAEK 193
Cdd:pfam05686  80 PDLELMFNCGDWPVVKKRDyrgpnANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  194 WPWKEKLSKGYFRGSRTSPE-RDPLILLSRENPELVDAEYTKNqawksEKDTLGKPPAKEIPLVDHCKYKYLFNFRGVAA 272
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  273 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLKPWVHYIPVKS--DLSDVRELLQFVKENDDIAQEISERGRQFITDHLRMED 350
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSddDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340       350
                  ....*....|....*....|....*....|
gi 564246489  351 VSCYWENLLTEYSKTLTYRVKRKKNYDVVS 380
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEVC 337
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 45-380 2.20e-132

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 384.91  E-value: 2.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   45 CIQENCSCHRSVWKQDLAPFRE-GISKELLSSVvSRKLGTHYQIIDNKLYRE-HDCMFPAR----CSGVEHFILEIIDHL 118
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWREtGITREMVERA-KRKAHFRYVIINGRVYVEtYGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  119 PNMEMVINVRDYPQVPTWM-----KPIIPVFSFSKTSEYRDIMYPAWTFWEggpavWPiyPTGLGRWDQMREDLQRSAEK 193
Cdd:pfam05686  80 PDLELMFNCGDWPVVKKRDyrgpnANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  194 WPWKEKLSKGYFRGSRTSPE-RDPLILLSRENPELVDAEYTKNqawksEKDTLGKPPAKEIPLVDHCKYKYLFNFRGVAA 272
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  273 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLKPWVHYIPVKS--DLSDVRELLQFVKENDDIAQEISERGRQFITDHLRMED 350
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSddDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340       350
                  ....*....|....*....|....*....|
gi 564246489  351 VSCYWENLLTEYSKTLTYRVKRKKNYDVVS 380
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEVC 337
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
118-368 4.55e-96

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 287.01  E-value: 4.55e-96
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   118 LPNMEMVINVRDYPQV------PTWMKPIIPVFSFSKTSEYRDIMYPAWTFWEGgpavwpiYPTGLGR-WDQMREDLQRS 190
Cdd:smart00672   2 VPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEEG 74

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   191 AEKWPWKEKLSKGYFRGSRTSP-ERDPLILLSRENPELVDAEYTKNQAWKSEKDTLGKPPAKEIPLVDHCKYKYLFNFRG 269
Cdd:smart00672  75 NKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   270 VAASFRLKHLFLCGSLVFHVGEEWLEFFYPQLKPWVHYIPVKSDLSD--VRELLQFVKENDDIAQEISERGRQFITDHLR 347
Cdd:smart00672 155 VAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNLS 234

                          250       260
                   ....*....|....*....|.
gi 564246489   348 MEDVSCYWENLLTEYSKTLTY 368
Cdd:smart00672 235 MEDVYDYMFHLLQEYAKLLKY 255
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 45-380 2.20e-132

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 384.91  E-value: 2.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   45 CIQENCSCHRSVWKQDLAPFRE-GISKELLSSVvSRKLGTHYQIIDNKLYRE-HDCMFPAR----CSGVEHFILEIIDHL 118
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWREtGITREMVERA-KRKAHFRYVIINGRVYVEtYGESFQTRdvftIWGILQLLRKYPGRL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  119 PNMEMVINVRDYPQVPTWM-----KPIIPVFSFSKTSEYRDIMYPAWTFWEggpavWPiyPTGLGRWDQMREDLQRSAEK 193
Cdd:pfam05686  80 PDLELMFNCGDWPVVKKRDyrgpnANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGNTR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  194 WPWKEKLSKGYFRGSRTSPE-RDPLILLSRENPELVDAEYTKNqawksEKDTLGKPPAKEIPLVDHCKYKYLFNFRGVAA 272
Cdd:pfam05686 153 VKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489  273 SFRLKHLFLCGSLVFHVGEEWLEFFYPQLKPWVHYIPVKS--DLSDVRELLQFVKENDDIAQEISERGRQFITDHLRMED 350
Cdd:pfam05686 228 SVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSddDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDD 307

                         330       340       350
                  ....*....|....*....|....*....|
gi 564246489  351 VSCYWENLLTEYSKTLTYRVKRKKNYDVVS 380
Cdd:pfam05686 308 VYDYMFHLLTEYAKLLKYKPTVPKGAVEVC 337
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
118-368 4.55e-96

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 287.01  E-value: 4.55e-96
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   118 LPNMEMVINVRDYPQV------PTWMKPIIPVFSFSKTSEYRDIMYPAWTFWEGgpavwpiYPTGLGR-WDQMREDLQRS 190
Cdd:smart00672   2 VPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEEG 74

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   191 AEKWPWKEKLSKGYFRGSRTSP-ERDPLILLSRENPELVDAEYTKNQAWKSEKDTLGKPPAKEIPLVDHCKYKYLFNFRG 269
Cdd:smart00672  75 NKRTKWSDKNAYAYWRGNPTVAsERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564246489   270 VAASFRLKHLFLCGSLVFHVGEEWLEFFYPQLKPWVHYIPVKSDLSD--VRELLQFVKENDDIAQEISERGRQFITDHLR 347
Cdd:smart00672 155 VAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNLS 234

                          250       260
                   ....*....|....*....|.
gi 564246489   348 MEDVSCYWENLLTEYSKTLTY 368
Cdd:smart00672 235 MEDVYDYMFHLLQEYAKLLKY 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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