|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
9.37e-155 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 437.33 E-value: 9.37e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSIS 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330
....*....|....
gi 56387583 321 TNILIPTLTSLSIL 334
Cdd:MTH00112 321 KNTLTATLTTLSTL 334
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
4.95e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 364.63 E-value: 4.95e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSIS 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330
....*....|....
gi 56387583 321 TNILIPTLTSLSIL 334
Cdd:MTH00070 321 TNNLLSLTIILSLM 334
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
5.08e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 359.50 E-value: 5.08e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSlNPTLLTIMSIS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330
....*....|....*
gi 56387583 321 TNIL-IPTLTSLSIL 334
Cdd:MTH00135 320 QLTLpLAISTTATLM 334
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
1.29e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 332.97 E-value: 1.29e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSIS 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSN-KMKQWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKWQFENT 320
|
330
....*....|....*
gi 56387583 320 PTNILIPTLTSLSIL 334
Cdd:MTH00105 321 KPMTLLPTLIILSTM 335
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
3.46e-94 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 283.78 E-value: 3.46e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSIS 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330
....*....|....
gi 56387583 321 TNILIPTLTSLSIL 334
Cdd:MTH00200 321 SNLLVGLLLLLSIL 334
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-334 |
2.71e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 263.33 E-value: 2.71e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 11 LSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 91 YPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSISSIALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 171 NQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPMLNTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 251 LAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNPTNILIPTLTS 330
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSI 330
|
....
gi 56387583 331 LSIL 334
Cdd:MTH00041 331 LSSI 334
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
2.51e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.89 E-value: 2.51e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 tgqwdITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLlitSHSLNPTLLTIMSIS 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLppNPSNKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330
....*....|....
gi 56387583 321 TNILIPTLTSLSIL 334
Cdd:MTH00160 311 FSLILNFLSFISLF 324
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
3.16e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 167.37 E-value: 3.16e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITqltyppacSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLL-LITSHSLNPTLLTIMSI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 160 SSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTlMTSWTKAPM 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITlppnpSNKMKQWSTKN 319
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSK 306
|
330
....*....|....*
gi 56387583 320 PTNILIPTLTSLSIL 334
Cdd:MTH00144 307 VLNSSIISLNLLGGL 321
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-329 |
2.10e-44 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 154.94 E-value: 2.10e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 12 SILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSminawhTGQWDITQLTY 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 92 PPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLLTIMSISSIALGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 172 QTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPMLNTTLMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 56387583 252 AGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWSTKNPTNILIPTLT 329
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTKILISMCTLS 325
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-313 |
1.83e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.43 E-value: 1.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 11 LSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 91 YPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPttLLLITSHSLNPTLLTIMSISSIALGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 171 NQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTSWTKAPMLNTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 56387583 251 LAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMK 313
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
4.48e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 127.54 E-value: 4.48e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 10 TLSILLGTMITITSNHWAMAWAGLEINTLSIIPLIS-KSHHPRAIEATTKYFLVQATASTLMLF-SSMINAWhTGQWDIT 87
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 88 QL--------TYPP----ACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKL----PPTTLLLITSHSLNP 151
Cdd:COG1007 187 GIaaalaaggANSPllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 152 ---TLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMI-IIAYNPK-LTLLTFY--IYTLMTTSIFLTM----- 219
Cdd:COG1007 267 dwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIlllsr 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 56387583 220 NTTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:COG1007 347 KGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.20e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.28 E-value: 1.20e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 13 ILLGTMITITSNHWAMAWAGLEINTLSIIPLI-SKSHHPRAIEATTKYFLVQATASTLMLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 79 WHTGQWDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLppTTLLLITSHSLNPTLLTIMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 159 ISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNP----KLTLLTFYIYTLMTTSIFLTMNTTNTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 56387583 233 SWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.86e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.84 E-value: 1.86e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 14 LLGTMITITSNHWAMAWAGLEINTLSIIPLIS-KSHHPRAIEATTKYFLVQATASTLMLF-SSMINAWhTGQWDITQL-- 89
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgMSLLYGA-TGSLSFAGIak 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 90 ------TYPP----ACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKL----PPTTLLLITSHSLNPT--- 152
Cdd:PRK05777 192 aladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 153 LLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTL--LTFY--IYTLMTTSIF--LTMNTTNTLK 226
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFgvISLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 56387583 227 LSTLmTSWT----KAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK05777 352 AESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.94e-24 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 100.47 E-value: 1.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 23 SNHWAMAWAGLEINTLSIIPLI-SKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL-TYPPACS---- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 97 ------LLTTAIAIKLGLTPFHFWFPEVLQGSPLT-TALLLSTVMKLPPttLLLITSHSLNPT-------LLTIMSISSI 162
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 163 ALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIA----YNPKLTLLTFYIYTLMTTSIFL--------TMNTTNTLKLSTL 230
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 56387583 231 mtsWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 ---AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
3.09e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 102.72 E-value: 3.09e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 11 LSILLGTMITITSNHWAMAWAGLEINTLSIIPLIS-KSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL 89
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 90 -----TYPPACSLLT-------TAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLL-------ITSHSLN 150
Cdd:TIGR01770 189 llflsNGMLNISLLLlgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 151 PTLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTL--LTFY--IYTLMTTSIFLTM------N 220
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 56387583 221 TTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 349 DEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
3.56e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 96.62 E-value: 3.56e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 11 LSILLGTMITITSNHWAMAWAGLEINTLSIIPLIS-KSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL 89
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGI 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 90 TYPPACS----LLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPTLltIMSISSIALG 165
Cdd:MTH00199 184 NSILTGDvgkiLITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 166 GWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNP----KLTLLTFYIYTLMTT---SIFLTMNTTNTLKLSTLMTSwTKAP 238
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 56387583 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.78e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.44 E-value: 1.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 14 LLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 90 -TYPP-----ACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVM-KLPP----TTLLLITSHSLNP---TLLT 155
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 156 IMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIY----TLMTTSIFLT----MNTTNTLKL 227
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRDL 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 56387583 228 STLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
1.45e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 80.29 E-value: 1.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 3 PLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAI---------EATTKYFLVQATASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 74 SMINAWHTGQ--------------WDITQLTYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 140 TLLLITSHSLNPTLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTL-------LTFYIYTLMT 212
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLqaswtyaVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 213 TSIFLTMNTTNTL------------------KLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVICTLEEFGTRtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 56387583 275 MTATTTIISMLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
4.72e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.51 E-value: 4.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 1 MTPLAKLISTLSILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHP-RAIEATTKYFLVQATASTLML--FSSM-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 76 INAWHTGQWDI------TQLTYPPACSL----LTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMK---LPPTTLL 142
Cdd:CHL00049 188 LSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKvaaSALATRI 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 143 LITSHSLNPT----LLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMI-IIAYNPK------LTLLTFYIYTLM 211
Cdd:CHL00049 268 FDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNL 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 56387583 212 TT--SIFLTMNTTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 348 GTfaCIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.49e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 74.15 E-value: 1.49e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 33 LEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQLT--YPPACSLLT------TAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 105 KLGLTPFHFWFPEVLQG-SPLTTALLLSTVMKLPPTTLLLITSH----------SLNPTLLTIMSISsIALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfrfalGLGWLLAVLALLS-MLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 174 QTRKIMAFSSISHIGWMMIIIAYNPKLTLL--TFYI--YTLMTTSIFLT----MNTTNTLKLSTLMTSWTKAPMLNTTLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 56387583 246 LTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
2-263 |
1.49e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.07 E-value: 1.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 2 TPLAKLIST-LSILLGTMITITSNHWAMAWAGLEinTLSIIPLISKSH---HPRAIEATTKYFLVQATASTLMLF-SSMI 76
Cdd:PRK02504 107 TPLGEFAAIlLTATLGGMFLSGATELVMIFISLE--TLSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYgSSLL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 77 NAWHTGQWD--------ITQLTYPPACSLL--TTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTL---LL 143
Cdd:PRK02504 185 YGLSGGSTQlsaialalITSPSLGLALALVfvIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALairLL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 144 ITSHSLNPT----LLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMI--IIAYNPKLTLLTFY--IYTLMT--- 212
Cdd:PRK02504 265 VTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMVFYllAYLFMNlga 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 56387583 213 -TSIFLTMNTTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 345 fACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-195 |
2.56e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.33 E-value: 2.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 38 LSIIP---LISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQW-----DITQLTYPPACS-----LLTTAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAQlllflAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 105 KLGLTPFHFWFPEVLQGSPLTTALLLSTVMK-----------LPpttLLLITSHSLNPTLLtIMSISSIALGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLA-ALGVIGIIYGALVALAQT 297
|
170 180
....*....|....*....|..
gi 56387583 174 QTRKIMAFSSISHIGWMMIIIA 195
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLGIF 319
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.52e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.04 E-value: 1.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 33 LEINTLSIIPLIS-KSHHPRAIEATTKYFLVQATASTLMLFSSminAWHTGQWDITQLTYPP-------------ACSLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 99 TTAIAIKLGLTPFHFWFPEVLQGSP--LTTALLLSTVMKLPPTTLLLIT--SHSLNPT----LLTIMSISSIALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 171 NQTQTRKIMAFSSISHIGWMMI-----IIAYNPklTLLTFYIYTLMTTSIFLTMN--------------------TTNTL 225
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLN 384
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 56387583 226 KLSTLMTswtKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 385 ELGGLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
2.13e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.55 E-value: 2.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 34 EINTLS---IIPLISKshhpRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDI----------TQLTYPPACSLLTT 100
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglindTSTGFALIVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 101 AIAI-KLGLTPFHFWFPEVLQGSPLTTALLLS------------TVMKLPPTTLLLIT-----SHSLNPTLLTIMSISSI 162
Cdd:PRK08668 204 AFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgaygflLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 163 ALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLL--TFYIYT--LMTTSIFLTMNT----TNTLKLSTLMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAggLFHVFNhaLFKGLFFLIFAAviyrTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 56387583 235 TKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
4.14e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.72 E-value: 4.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 50 PRAIEATTKYFLVQATASTLMLFSSMINAWHTGQW----DITQLTYPPACSLLT-----TAIAIKLGLTPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 121 GSPLTTALLLS-TVMKLPPTTLLLI-------TSHSLNPtLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 193 IIAYNPKLTLLTFYIYT----LMTTSIFLTMNT----TNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 56387583 265 LIIQELIKqemtaTTTIISMLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
3.54e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 51.68 E-value: 3.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 13 ILLGTMITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYFLVQATA------STLMLFSSMINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 87 TQLT-----YPPACSLLT-----TAIAIKLGLTPFHFWFPEVLQGSP-LTTALLLSTVMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 56387583 149 LNPTLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYTL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
11-190 |
6.03e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 50.70 E-value: 6.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 11 LSILLGTM-ITITSNHWAMAWAGLEINTLSIIPLISKSHHPRAIEATTKYF---------------LVQATASTL----- 69
Cdd:PRK06458 114 YQLFLFTMlLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVmgdge 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 70 --MLFSSMINawHTGQWDITQLTYppACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVmkLPPTTLL----- 142
Cdd:PRK06458 194 maILWTELLK--HASLLDPTLMKL--AFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlry 267
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 56387583 143 -LITSHSLNP----TLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWM 190
Cdd:PRK06458 268 yILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
3-271 |
1.33e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 49.77 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 3 PLAKLISTLSILLGTMITI-TSNHWAMAWAGLEINTLSIIPLISKSHH-PRAIEATTKYFLVQATASTLMLFSSMINAWH 80
Cdd:COG1009 109 GLARFFAYLLLFMAAMLGLvLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAI 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 81 TGQWDITQL-----------TYPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVM---------KLPPtt 140
Cdd:COG1009 189 AGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSP-- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 141 lLLITSHSLNPTLLTIMSISSIaLGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAynpkLTLLTFYIYTLMTTSIF---- 216
Cdd:COG1009 267 -LFALSPVWLTVVAIIGAITAL-FAALIALAQTDIKRVLAYSTVSQLGYMFLALG----VGAYVAALFHLLTHAFFkall 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 56387583 217 --------LTMNTTNTLKLSTLmtsWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELI 271
Cdd:COG1009 341 flgagsviHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL 400
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-195 |
2.52e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.05 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 38 LSIIP---LISKSHHPRAIEATTKYFLVQATASTLMLFSSM----INAWHTGQWDITQLTYPPACSLLTT--------AI 102
Cdd:PRK05846 142 AMLIPmyfLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 103 AIKLGLTPFHFWFPEVLQGSPLTTALLLSTVM-KLPPTTLLLI-------TSHSLNPtLLTIMSISSIALGGWMGLNQTQ 174
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILlKMGAYGLLRFslplfpdASHEFAP-IIITLGVIAIIYGALVALAQTD 300
|
170 180
....*....|....*....|.
gi 56387583 175 TRKIMAFSSISHIGWMMIIIA 195
Cdd:PRK05846 301 IKKLIAYSSISHMGFVTLGIF 321
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-325 |
2.62e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.79 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 96 SLLTTAIAIKLGLTPFhFWFPEVLQGSPLTTALLLSTVMK-------LPPTTLLLITSHSLNPTLLTIMSISSIALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 169 GLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTL--LTFYIYTLMT--TSIFLT----MNTTNTLKLSTLMTSWTKAPML 240
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALGTPAGIngAIFYLVHDMVvkTALFLIagslVRLTGYRSLQYLGGLYRKEPLF 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE---MTATTTIISMLSLLGLFFYLRLAYCSTITLPPNPSNKMKQWsT 317
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGayiLLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY-R 448
|
....*...
gi 56387583 318 KNPTNILI 325
Cdd:PRK12663 449 KLPLSILA 456
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
5.71e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.12 E-value: 5.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 98 LTTAIAIKLGLT--------PFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITS--HSLNPT---LLTIMSISSIAL 164
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 165 GGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYT----LMTTSIFLTM----NTTNTLKLSTLMTSWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 56387583 237 APMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-195 |
2.21e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.79 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 55 ATTKYFLVQATASTLMLFSSMINAWHTGQ--WDITQLT---YPPACSLLT-----TAIAIKLGLTPFHFWFPEVL-QGSP 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 56387583 124 LTTALLLSTVMKLPPTTL------LLITSHSLNPTLLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIA 195
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIA 295
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
2.45e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.07 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 80 HTGQWDITQL-TYPPACSLLTTAIAI-------KLGLTPFHFWFPEVLQGSPLTTALLLSTVM---------KLPPTtll 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 143 LITSHSLNPTLLtIMSISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPK------LTLLTfyIYTLMTTSIF 216
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 56387583 217 LTM----NTTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
3.88e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.49 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 59 YFLVQATASTLMLFSSMINAW-HTGQWDITQLTYPPACS-----LLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGILslvflLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 133 VM-KLPPTTLLLITSHSLNPTL------LTIMSISSIaLGGWMGLNQTQTRKIMAFSSISHIGWMMIIIAY--------N 197
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPELwwgvliLLAGSISAL-LGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvygL 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 198 PKLTLLTF-------YIYTLMTTSIFLTMNT----TNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08667 325 DTLALLALggalfhsLNHALFKSLLFLTAGSvvhaTGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLL 404
|
250 260
....*....|....*....|....*.
gi 56387583 267 IQELIKQEMTATTTI-ISMLSLLGLF 291
Cdd:PRK08667 405 YESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
4.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.96 E-value: 4.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 97 LLTTAIAIKLGLTPFHFWFPEVLQGSP-LTTAL---LLSTV--MKLPPTTLLLITSHSLNpTLLTIMSISSIALGGWMGL 170
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYPTAPaPVTAVfagLLTKVgvYAIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 171 NQTQTRKIMAFSSISHIGWMMIIIAYNPKLTL--LTFYI--YTLMTTSIFLTMN-------TTNTLKLSTLMTSwtkAPM 239
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA---SPL 369
|
170 180
....*....|....*....|....*....
gi 56387583 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
8.27e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.25 E-value: 8.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 34 EINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQLTY----PPACSLLTTAIAIKL--- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvNPTSPVIYGGLLLLIfgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 107 ----GLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLIT-----SHSLNPTLLTIM---SISSIALGGWMGLNQTQ 174
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLialSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 175 TRKIMAFSSISHIGWMMIIIAYNPKLTL-------LTFYIYT----LMTTSIFLTMNTTNTLKLSTLMTSwtkAPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKsalfLGAGIVSYRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 56387583 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
97-268 |
8.36e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 8.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 97 LLTTAIAIKLGLTPFHFWFPEV-LQGSPLTTALLLSTVMKLPPTTLLLI-------TSHSLNPTLLTIMSISSIaLGGWM 168
Cdd:PRK07363 210 GLLLGFGIKIPLVPLHTWLPDAyTEASPAVAILLGGVLAKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTISVI-YGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 169 GLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTfYIYTLMTTSIFLTM------------NTTNTLKLSTLMTSWTK 236
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLMNPIRG 367
|
170 180 190
....*....|....*....|....*....|..
gi 56387583 237 APMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 368 LPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
8.67e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.17 E-value: 8.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 33 LEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQLTY--PPACSLLTTAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 111 FHFWFPEVLQGS-PLTTALLLSTVMK---LPPTTLLLITSHSLNPtlLTIMSISSIALGGWMGLNQTQTRKIMAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAePPVSALLSGVVVKagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 187 IGWMMIIIAYNPKLTLltfyIYTLMTTSIFLTMNT----TNTLKLSTLMTSWTKAPMLNTTLMLtllslAGLPPLTGFLP 262
Cdd:PRK07234 281 LGFILAAPLVGGLYAL----AHGLVKSTLFLCAGAlpsrNFTELISQMLGIGKWIPLTMASFSI-----AGFPLLAGFVS 351
|
....*....
gi 56387583 263 KWLIIQELI 271
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
9.66e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.95 E-value: 9.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 33 LEINTLSIIPLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL-----------TYPPACSLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 102 IAIKLGLTPFHFWFPEVLQGSPLTTALLLS-TVMKLPPTTL-----------LLITSHSLNpTLLTIMSISSIALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvfkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 170 LNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIY----TLMTTSIFLTMNTT----NTLKLSTLMTSWTKAPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 56387583 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-266 |
2.30e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.98 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 91 YPPACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPT-----LLTIMSISSIALG 165
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 166 GWMGLNQTQTRKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIY----TLMTTSIFLTMNT----TNTLKLSTLMTSWTKA 237
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAM 353
|
170 180
....*....|....*....|....*....
gi 56387583 238 PMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 354 PITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-203 |
2.65e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 38 LSIIPL---ISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTG--QWDITQL---TYPPACSLLTTA-----IAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 105 KLGLTPFHFWFPEV-LQGSPLTTALLLSTVMKLPPTTLL-------LITSHSLNPTLLTIMSISSIaLGGWMGLNQTQTR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglfPEAWVYLAPWLATWAVVSVL-YGASCAIAQKDMK 296
|
170 180
....*....|....*....|....*..
gi 56387583 177 KIMAFSSISHIGWMMIIIAYNPKLTLL 203
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSIL 323
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
3.07e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.51 E-value: 3.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 48 HHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQLTYPPACS--------LLTTAIAIKLGLT------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 114 WFPEVLQGSPLTTALLLSTVMKLPPTTLLLITSHSLNPT-----LLTIMSISSIALGGWMGLNQTQTRKIMAFSSISHIG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 189 WMMIIIAYNPK------LTLLTFYI--YTLMTTSIFLTMN-------TTNTLKLSTLMtswTKAPMLNTTLMLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGivaheaaTRDIRKLGGLR---KEMPITFIVASIAALAMAG 392
|
250
....*....|
gi 56387583 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-334 |
1.19e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 36.47 E-value: 1.19e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 56387583 291 FFYLRLAYCSTITLPPNPSNKMKQWSTKNPTNI-LIPTLTSLSIL 334
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSIL 45
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-273 |
1.99e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 7 LISTLSILLGTMITI-TSNHWAMAWAGLEINTLS---IIPLISKSHHPRAIeattkyFLVQATASTLMLFSSMINAWH-T 81
Cdd:PRK06459 74 LSSLYILTILGMAIVlTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 82 GQWDITQLTYPPACSLLTTAIAIKLGLTPFHF--WFPEVLQGSPLTTALLLSTVMKLPP-----TTLLLITSHSLNPTLL 154
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGvygilKMTILTQTIPIGYFGL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 155 TIMSISSIA--LGGWMGLNQTQTRKIMAFSSISHIGWMMI-----IIAYNPKLTLLTFYIYTLMTTSI-------FLTMN 220
Cdd:PRK06459 228 TILAIGAFSilFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFahsvaktGLFLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 56387583 221 TTNTLKLSTLMTSWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQ 273
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMF 360
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-219 |
3.49e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.13 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 101 AIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTV-MKLPPTTLLLIT-------SHSLNPTLLTiMSISSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSwpilplgAQNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 56387583 173 TQTRKIMAFSSISHIGWMMIiiaynpklTLLTFYIYTLmTTSIFLTM 219
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSI--------TLVTHDIIGL-TGSIFIML 355
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
3.54e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.16 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 103 AIKLGLTPFHFWFPEVLQGSP-----LTTALLLSTVMKLPPTTLLLITSHSLNPT--LLTIMSISSIALGGWMGLNQTQT 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPiaiaaLFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 176 RKIMAFSSISHIGWMMIIIAYNPKLTLLTFYIYT----LMTTSIFLTM-------NTTNTLKLSTLMTSWtkaPMLNTTL 244
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 56387583 245 MLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTATTTIISMLSLLGLFFYLRL 296
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
4.10e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.79 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 111 FHFWFPEVLQGSPLTTALLLSTVMKLPPTTLL-----LITSHSLNPTLLTIMSISSIALGGWMGLNQTQTRKIMAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 186 HIGWMMIIIAYNPKLTLLTFYI--YTLMTTSIFL---------TMNTTNTLKLSTLMTSwtkAPMLNTTLMLTLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 56387583 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
5.97e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.27 E-value: 5.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 107 GLTPFHFWFPEVLQGSPLTTALLLSTV-MKLPPTTLLLITSHSLNPTL-----LTIMSISSIALGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 181 FSSISHIGWMMI--------IIAYNPKLTLLTFY--IYTLMTTSIFLTM---------NTTNTLKLSTLMTSWTKAPMLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 56387583 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
19-195 |
6.37e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.14 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 19 ITITSNHWAM---AWA--GLEINTLsiipLISKSHHPRAIEATTKYFLVQATASTLMLFSSMINAWHTGQWDITQL---- 89
Cdd:PRK08168 115 LLVLSDHLLVliaAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALwahl 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56387583 90 -TYPP------ACSLLTTAIAIKLGLTPFHFWFPEVLQGSPLTTALLLSTVMKLPPTTLL----LITSHSLNPTLLTIMS 158
Cdd:PRK08168 191 aAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIrfapLLEQAPPARWLLVLVG 270
|
170 180 190
....*....|....*....|....*....|....*..
gi 56387583 159 ISSIALGGWMGLNQTQTRKIMAFSSISHIGWMMIIIA 195
Cdd:PRK08168 271 LATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECG 307
|
|
| |
