|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-699 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1426.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 1 YQYSWIIPFVPLPIPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFSFE 80
Cdd:CHL00025 5 YQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 81 LGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 160
Cdd:CHL00025 85 FGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 WFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQF 240
Cdd:CHL00025 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 241 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTM 320
Cdd:CHL00025 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTM 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 321 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLS 400
Cdd:CHL00025 325 SQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLS 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 401 LCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNYSGKKSSSFYSIKLWGKEEQ 480
Cdd:CHL00025 405 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEES 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 481 KMINRNFRLSpllkiKMNNNE-------KPYRIGGNVTKGVLFTITNFSYKRASSYPHESDNTMLFPMLILVLFTLFVGA 553
Cdd:CHL00025 485 KKINKLLLLL-----TMNNNErvsffskKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGF 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 554 IAIPFNQEGIHLNILSKLLTPSINLLHQNSNDFEDWYQFLTNATFSVSIACFGIFTAFLFYKPFYSSLQNLNLLNSFAKS 633
Cdd:CHL00025 560 IGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKG 639
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 55978662 634 GPKRIFLDKIIYLIYDWSYNRGYIDTFYSISLTKGIRGLAELTHFFDRRVIDGITNGVGITSFFVG 699
Cdd:CHL00025 640 GPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVG 705
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-699 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 699.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 1 YQYSWIIPFVPLPIPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFSFE 80
Cdd:PRK07376 5 YQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 81 LGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 160
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 WFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQF 240
Cdd:PRK07376 165 WYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 241 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTM 320
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTI 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 321 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLS 400
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLA 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 401 LCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGhlnihfqNYSGkksssfysiklwgkEEQ 480
Cdd:PRK07376 405 ISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG--------------NDK 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 481 KMINRnfrlspLLKIKMNNNEKPYRIGGNVTKGvlftitnfsykRASSYPHESDNTMLFPMLILVLFTLFVGAIAIPFNq 560
Cdd:PRK07376 464 ELQKE------LLAAADAPGHHEGHHEEHGEHH-----------HHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWN- 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 561 egihlNILSKLLTPSiNLLHQNSNDFeDWYQFLTNATFSVSIACFGIFTAFLFYkpfyssLQNLNLLNSFAKSGPKrifl 640
Cdd:PRK07376 526 -----NRFEAFLHAP-GEALEAAAHF-EWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP---- 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 55978662 641 dkiiylIYDWSYNRGYIDTFYSISLTKGIRGLAELTHFFDRRVIDGITNGVGITSFFVG 699
Cdd:PRK07376 589 ------LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSG 641
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-699 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 558.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 1 YQYSWIIPFVPLpipiligMGLLLFPTATKKLRRMWAF-PNILLLSIVMIFSVdLSIQQINRSSIYQYVWSWTINNDFSF 79
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSL-LLFPAVLGGEVVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 80 ELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 159
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 160 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynnevHFLFVTLCASLLFAGAVAKSAQ 239
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 240 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 319
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 320 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVFMGGLRKHVPITQIAFLVGTL 399
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 400 SLCGIPPLACFWSKDEILSNSW---LYSPIFAIIAWSTAGLTAFYMFRIYLLTFeghlnihfqnysgkksssfysiklWG 476
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 477 KEEQKminrnfrlspllkikmnnnekpyriggnvtkgvlftitnfsykrASSYPHESDNTMLFPMLILVLFTLFVGAIAI 556
Cdd:COG1009 435 KPRPK--------------------------------------------TPKHPHESPWLMTLPLVVLAVLSLVLGLLLP 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 557 PFNQEGIHlniLSKLLTPSINLLHQnsndfedwyQFLTNATFSVSIAcfGIFTAFLFYKpfysslqnLNLLNSFAKSGPk 636
Cdd:COG1009 471 GLLEGLLA---PAAVLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLYL--------KRPLPALAERLK- 527
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 55978662 637 rifldkiiyLIYDWSYNRGYIDTFYSISLTKGIRGLAELThFFDRRVIDGITNGVGITSFFVG 699
Cdd:COG1009 528 ---------PLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSG 580
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
3-692 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 547.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 3 YSWIIPFVPLpipilIGMGLLLFptATKKLRRMWA-FPNILLLSIVMIFSVDLSIQQINRS--SIYQYVWSWTINNDFSF 79
Cdd:PRK06590 4 LLWLIVLLPL-----IGALILGL--FGRRIGEKWAhLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 80 ELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 159
Cdd:PRK06590 77 DFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 160 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQ 239
Cdd:PRK06590 157 FWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKSAQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 240 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 319
Cdd:PRK06590 234 FPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYST 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 320 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVGTL 399
Cdd:PRK06590 314 MSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 400 SLCGIPPLACFWSKDEILSNSWLYSPIFA-IIAWSTAGLTAFYMFRIYLLTFeghlnihfqnysgkksssfysiklWGKE 478
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF------------------------HGKE 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 479 EQKMINrnfrlspllkikmnnnekpyriggnvtkgvlftitnfsykrassyPHESDNTMLFPMLILVLFTLFVGAIAIPf 558
Cdd:PRK06590 442 KEKIHH---------------------------------------------PHESPAVMTLPLIVLAVLSVFAGALIVP- 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 559 nqegihlNILSKLLTPSINLLHQNSNDFEDWYQFLtnaTFSVSIAcfGIFTAFLFYkpfyssLQNLNLLNSFAKSGPkri 638
Cdd:PRK06590 476 -------PFLGVLPLTTELAHGEAEHHLPVWVALL---PLVVALA--GIALAWLLY------LKKPTLPTSIAAPGR--- 534
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 55978662 639 fldkiiyLIYDWSYNRGYIDTFYSISLTKGIRGLAE-LTHFFDRRVIDGITNGVG 692
Cdd:PRK06590 535 -------FLYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNSA 582
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
5-699 |
5.83e-161 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 477.16 E-value: 5.83e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 5 WIIPFVPLpIPILIgmgLLLFPTATKKlrRMWAFPNILLLSIVMIFSVDLSIQQINRSS---IYQYVWSWTINNDFSFEL 81
Cdd:TIGR01974 4 FLIVFLPL-IGFLI---AGLFGRRIGE--RVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 82 GYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 161
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 162 FTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNliynneVHFLFVTLCASLLFAGAVAKSAQFP 241
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 242 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMS 321
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 322 QLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSL 401
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 402 CGIPPLACFWSKDEILSNSW--LYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGhlnihfqnysgkksssfysiklwgkEE 479
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG-------------------------KE 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 480 QkminrnfrlspllkikmnnnekpyriggnvtkgvlftitnfsyKRASSYPHESDNTMLFPMLILVLFTLFVGAIAIPFN 559
Cdd:TIGR01974 439 R-------------------------------------------HEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLF 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 560 QegihlnilskLLTPSINLLHQNSNDFEDWYQFLTNATFSVSIAcfGIFTAFLFYkpfyssLQNLNLLNSFAKSGPKrif 639
Cdd:TIGR01974 476 E----------FLKGVLPTSAEPALEHHHVPALEIWSPTAVAIL--GILLAYLLY------LGNPTLPAKIAQRHSG--- 534
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55978662 640 ldkiiylIYDWSYNRGYIDTFYSISLTKGIRGLAELTHFF-DRRVIDGITNGVGITSFFVG 699
Cdd:TIGR01974 535 -------LYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGAIS 588
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
444-680 |
3.99e-138 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 405.07 E-value: 3.99e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 444 RIYLLTFEGHLNIHFQNYSGKKSSSFYSIKLWGKEEQKMINRNFRlsPLLKIKMNNNE-------KPYRIGGNVTK--GV 514
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFR--TLLLLTMNNNEkvsffskKTYRIDGNVRNmtRP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 515 LFTITNFSYKRASSYPHESDNTMLFPMLILVLFTLFVGAIAIPFNQEGIHLNILSKLLTPSINLLHQNSNDFEDWYQFLT 594
Cdd:pfam01010 79 FITITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVT 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 595 NATFSVSIACFGIFTAFLFYKPFYSSLQNLNLLNSFAKSGPKRIFLDKIIYLIYDWSYNRGYIDTFYSISLTKGIRGLAE 674
Cdd:pfam01010 159 NAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAE 238
|
....*.
gi 55978662 675 LTHFFD 680
Cdd:pfam01010 239 LTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
59-470 |
1.10e-108 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 342.37 E-value: 1.10e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 59 INRSSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS 138
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 139 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVh 218
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 219 flfvTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITV 298
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 299 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMV 378
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 379 FMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSW-LYSPIFAI-IAWSTAGLTAFYMFRIYLLTFEGHLNI 456
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 55978662 457 HFQNYSGKKSSSFY 470
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
42-469 |
2.71e-108 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 341.29 E-value: 2.71e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 42 LLLSIVMIFSVDLSI-----QQINRSSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQG 116
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 117 YLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWIT 196
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 197 GSFEFQDLFEIFNNLIYNNevhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 276
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 277 LPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 356
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 357 GSIIHSMeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWL-YSPIFAI-IAWST 434
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410 420 430
....*....|....*....|....*....|....*
gi 55978662 435 AGLTAFYMFRIYLLTFEGHLNIHFQNYSGKKSSSF 469
Cdd:MTH00020 416 ALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDW 450
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
16-453 |
9.53e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 297.25 E-value: 9.53e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 16 ILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFsvdLSIQQINRSSIYQyvWSWTINNDFSFELGYLIDSLTSIMSIL 95
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 96 ITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAF 175
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 176 VTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFLFvtlcasLLFAGAVAKSAQFPLHVWLPDAMEGPTP 255
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----ILNLDLTLFLL------GLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 256 ISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 335
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 336 RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDE 415
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 55978662 416 ILSNswLYSPIFAIIAWSTA----GLTAFYMFRIYLLTFEGH 453
Cdd:MTH00211 389 ILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
137-436 |
5.32e-84 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 266.87 E-value: 5.32e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 137 SSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNE 216
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 217 VHFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIG 294
Cdd:pfam00361 81 LLLLFL-----LILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 295 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysp 371
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 55978662 372 dKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAG 436
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-417 |
7.90e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 278.38 E-value: 7.90e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 59 INRSSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS 138
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 139 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDL------FEIFNNLI 212
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 213 YN---NEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNL 289
Cdd:MTH00032 212 YGggaYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 290 ISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivg 368
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 55978662 369 yspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL 417
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
2-699 |
1.01e-83 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 276.79 E-value: 1.01e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 2 QYSWIIPFVPLpipilIGMGLLLfPTATKKLRRMW----AFPNILLLSIVMIFSVdLSIQQINRSSIYQYVWSWTINNDF 77
Cdd:PRK07390 7 QTSWLIPLYGL-----IGALLSL-PWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 78 SFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLL 157
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 158 IGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliyNNEVHFLFVTLCASLLFAGAVAKS 237
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 238 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 317
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 318 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVG 397
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 398 TLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFeghlnihfqnysgkksssfysiklWGK 477
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF------------------------LGK 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 478 EEQKMinrnfRLSPllkikmnnnekpyriggnvtkgvlftitnfsykrassyphESDNTMLFPMLILVLFTLfvgaiaip 557
Cdd:PRK07390 442 PQQKT-----RRSP----------------------------------------EVLWPMALPMVILAGFTL-------- 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 558 fnqegihlniLSKLLTPSINLLhqnsndfEDWYQFLTNATFSVSIA-CFGIFT-AFLFYKPFYSSLQNLnllnsfaksgP 635
Cdd:PRK07390 469 ----------HLPLLLQQWGLL-------PSWEALNLWAAPLLVASgLLGVLLgAWIYLNKAWSRPIQL----------P 521
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 55978662 636 KRIFLDkiiYLIYDWsynrgYIDTFYSISLTKGIRGLAELTHFFDRRVIDGITNGVGITSFFVG 699
Cdd:PRK07390 522 LRFLQD---LLAYDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSG 577
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
69-453 |
1.05e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 268.19 E-value: 1.05e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 69 WSWTINNDFSFELGYLIDSLtsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIY 144
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 145 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQdlfEIFNNLIYNnevhflfvTL 224
Cdd:MTH00004 142 IGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ---QLFSPTQTP--------TL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 225 CASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 304
Cdd:MTH00004 211 PLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 305 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMGGLR 384
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQ 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 385 KHVPITQIAFLVGTLSLCGIPPLACFWSKD---EILSNSWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFEGH 453
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
40-450 |
6.89e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 266.84 E-value: 6.89e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 40 NILLLSIVMIFSVDLSIQQINRS--SIYQYVWSWTINNDFSFELGYLIDSLtsimSILITTVGIFV----LIYSDNYMSH 113
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 114 DQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFY 193
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 194 WITGSFefqDLFEIFnnLIYNNEVHFLFVTLCASLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 273
Cdd:MTH00208 214 INFNSW---NLNEIL--SLNNSNSFLINILLFGILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 274 ARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLF 353
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 354 LGSGSIIHSMeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPIFA 428
Cdd:MTH00208 367 LCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILA 438
|
410 420
....*....|....*....|..
gi 55978662 429 IIAwstAGLTAFYMFRIYLLTF 450
Cdd:MTH00208 439 LIA---TLLTAVYSFRIIFFCF 457
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-448 |
3.14e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 268.33 E-value: 3.14e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 67 YVWSWTINNDFSFelgyLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIF 146
Cdd:PRK12647 48 YAWVPSLGVNLSF----LLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 147 WELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEiFNNLIYNNEvHFLFVTLca 226
Cdd:PRK12647 124 WELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP-LYLAILL-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 227 sLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLAL 306
Cdd:PRK12647 200 -LVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 307 AQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVFMGGL 383
Cdd:PRK12647 279 RQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGL 349
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 55978662 384 RKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSnSWLYSPIFAIIAWSTAGLTAFYMFRIYLL 448
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE-ALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
69-445 |
4.40e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 263.69 E-value: 4.40e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 69 WSWTINNDFSFELGYLIDsltsIMSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIY 144
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 145 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnnLIYNNEVHFLFvtl 224
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLL--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 225 caSLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATL 304
Cdd:MTH00066 212 --GLILA-AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 305 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMGGLR 384
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 55978662 385 KHVPITQIAFLVGTLSLCGIPPLACFWSKDEILS-------NSWlySPIFAIIAWStagLTAFYMFRI 445
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIATS---FTAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
7-446 |
1.79e-76 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 251.99 E-value: 1.79e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 7 IPFVPLPIPILIGMGLLLFPtatKKLRRMWAFpNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTinndFSFELGYLID 86
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 87 SLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPA 166
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 167 AAnACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliynNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWL 246
Cdd:COG0651 156 LR-AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 247 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 322
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 323 LGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTL 399
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 55978662 400 SLCGIPPLACFWSKDEIL-----SNSWLYSPIFAIiawsTAGLTAFYMFRIY 446
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLqaaleAGAWLLAAVLLL----SSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
69-453 |
5.55e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 252.85 E-value: 5.55e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 69 WSW----TINNDFSFELGYLidsltsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNL 140
Cdd:MTH00108 66 WHWmtiqTLKLSLSFKLDYF--------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 141 IQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiynnevhfL 220
Cdd:MTH00108 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNN--------S 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 221 FVTLcASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLL 300
Cdd:MTH00108 210 NLPL-MGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 301 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFM 380
Cdd:MTH00108 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 381 GGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL-------SNSWLYSpiFAIIAWStagLTAFYMFRIYLLTFEGH 453
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWALL--ITLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
69-445 |
6.05e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.13 E-value: 6.05e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 69 WSWTINNDFSFELGYLIDSLtsimSILITTVGIFV----LIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIY 144
Cdd:MTH00137 70 WNWMNTLTFDINISFKFDHY----SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 145 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLllgILGFYWI---TGSFEFQDLFEIFNNLIynnevhflf 221
Cdd:MTH00137 146 IGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDFD--------- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 222 VTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLG 301
Cdd:MTH00137 214 LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 302 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMG 381
Cdd:MTH00137 294 ATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMG 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55978662 382 GLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEI---LSNSWL--YSPIFAIIAWStagLTAFYMFRI 445
Cdd:MTH00137 366 GLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
85-453 |
3.70e-70 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 244.45 E-value: 3.70e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 163
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 164 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEifNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQFPLH 243
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIA--NADEIQNSPLFIPAMI---LILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 244 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 323
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 324 GYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVFMGGLRKHV 387
Cdd:PRK12645 311 GLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIM 381
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 55978662 388 PITQIAFLVGTLSLCGIPPLACFWSKDEIL------SNSWLYSP-----IFAIIAWSTAGLTAFYMFRIYLLTFEGH 453
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFesmlnaTEANLFSLdtwgvLFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-430 |
5.05e-70 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 236.41 E-value: 5.05e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKlrrmWAFPNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFsfelGYLIDSLTSIMS 93
Cdd:PRK06525 10 LPFIGALVVFFLPGRRAA----ELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVALF----GLVIDPVSVLIG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 94 ILITTVGIFVLIYSDNYMS-------HDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPA 166
Cdd:PRK06525 82 FVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 167 AANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnneVHFLFVtlcaslLFAgAVAKSAQFPLHVWL 246
Cdd:PRK06525 161 ALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLGI------LFA-AWGKSAQLPFYSWL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 247 PDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMnliSLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 322
Cdd:PRK06525 231 PDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 323 LGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLV 396
Cdd:PRK06525 308 LGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCV 378
|
410 420 430
....*....|....*....|....*....|....
gi 55978662 397 GTLSLCGIPPLACFWSKDEILSNSWLYSPIFAII 430
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
85-452 |
2.33e-69 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 242.06 E-value: 2.33e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 164
Cdd:TIGR00940 73 MDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 165 PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIynNEVHFLFVTLcasLLFAGAVAKSAQFPLHV 244
Cdd:TIGR00940 153 AHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTKSAQFPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 245 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 324
Cdd:TIGR00940 228 WLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 325 YMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVFMGGLRKHVP 388
Cdd:TIGR00940 308 LIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMP 378
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 55978662 389 ITQIAFLVGTLSLCGIPPLACFWSKDEILS-----------NSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:TIGR00940 379 ITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-431 |
2.21e-68 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 241.63 E-value: 2.21e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 76 DFSFELgyliDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSY 155
Cdd:PRK12648 69 NLSLRL----DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 156 LLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNnevHFLFV-TLCASLLfaGAV 234
Cdd:PRK12648 145 LLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRA---HPLYPpALVLILL--GAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 235 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRG 314
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 315 LAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVFMGGLRKHVPITQ 391
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITA 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 55978662 392 IAFLVGTLSLCGIPPLACFWSK----DEILSNSWLYS-----PIFAIIA 431
Cdd:PRK12648 370 TLAMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-414 |
1.37e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 234.34 E-value: 1.37e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 80 ELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIG 159
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 160 FWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFNN--LIYNNEVHFLFVTLCAsLLFAGAVAKS 237
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY---DIATILQDseLIENIKGHPLFLITLI-LIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 238 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAY 317
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 318 STMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVFMGGLRKHVPIT 390
Cdd:PRK12649 309 STISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPIT 379
|
330 340
....*....|....*....|....
gi 55978662 391 QIAFLVGTLSLCGIPPLACFWSKD 414
Cdd:PRK12649 380 FIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-413 |
7.38e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 234.82 E-value: 7.38e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 67 YVWSWTinNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQIYI 145
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 146 FWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYnnevhflfVTLC 225
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA--------VSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 226 ASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLA 305
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 306 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVFMGG 382
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSG 356
|
330 340 350
....*....|....*....|....*....|.
gi 55978662 383 LRKHVPITQIAFLVGTLSLCGIPPLACFWSK 413
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
10-414 |
2.82e-63 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 225.02 E-value: 2.82e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 10 VPLPIPILIGMGLLLFPTATKKLRRMWAFpnILLLSIVMifSVDLSIQQINRSSIYQYV-----WSWTINNDFSFELgyl 84
Cdd:PRK12646 4 VYLLIAILVIMAMILLTSKRRALAKYAGY--IALVAPII--SSIYFLIQIPSVAKLQYLstsipWMKTLDINLDLRL--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 iDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYL-RFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 163
Cdd:PRK12646 77 -DGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 164 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLiyNNEVHFLFVTLCaslLFAGAVAKSAQFPLH 243
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFM---FLLGAFTKSAQFPFH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 244 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 323
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 324 GYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKH 386
Cdd:PRK12646 311 GMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQL 381
|
410 420
....*....|....*....|....*...
gi 55978662 387 VPITQIAFLVGTLSLCGIPPLACFWSKD 414
Cdd:PRK12646 382 FPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
41-470 |
6.57e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 216.93 E-value: 6.57e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFsvdLSIQQINRSSIYQYVWSWTINNDFSFELGYLIDSLTSI-MSI--LITTVgifVLIYSDNYMSHDQGY 117
Cdd:MTH00165 11 LFFLSLILFF---LGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLfMSFvlFISSM---VIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 118 LRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNRIGDFGLLLGIlGFYWITG 197
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 198 SFEFqdlfeIFNNLIYNNEVHFLFVTLcasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 277
Cdd:MTH00165 163 SWNF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 278 PLFIvIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 357
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 358 SIIHSMeaivgyspDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKD---EILSNSWLYSPIFAIIAWST 434
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420 430
....*....|....*....|....*....|....*.
gi 55978662 435 aGLTAFYMFRIYLLTFEGHLNIHFQNYSGKKSSSFY 470
Cdd:MTH00165 386 -GLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFML 420
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
67-470 |
8.18e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 205.46 E-value: 8.18e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 67 YVWSWTINN----DFSFELgyLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQ 142
Cdd:MTH00151 32 LIFEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 143 IYIFWELVGMCSYLLIGFWFTRPAAANACQKAFvTNRIGDFGLLLGILGFYwITGSFefqdlfeifnNLIYNNEVHFLFV 222
Cdd:MTH00151 110 LLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLGHW----------SILSMWDFKLSGW 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 223 TLCasLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGA 302
Cdd:MTH00151 178 LGL--LLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 303 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVFMGG 382
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS--------SGTQDIRLLGS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 383 LRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILS---NSWLYSPIFAIIAWSTaGLTAFYMFRIYLLTFEGHLNIHFq 459
Cdd:MTH00151 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV-GLTALYSARLSFCLVWGSMKSSS- 405
|
410
....*....|.
gi 55978662 460 nYSGKKSSSFY 470
Cdd:MTH00151 406 -LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
41-467 |
2.63e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 204.11 E-value: 2.63e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRF 120
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 121 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWItGSFe 200
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMH-GNW- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 201 fqdlfeifnNLIYNNEVHFLFVTLCASLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 280
Cdd:MTH00209 163 ---------NIFYLNFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 281 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 360
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 361 HSMEaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWL--YSPIFAIIAWSTAGLT 438
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLEsnMPIMTLILMFLSTSLT 384
|
410 420
....*....|....*....|....*....
gi 55978662 439 AFYMFRIYLLTFEGHLNIHFQNYSGKKSS 467
Cdd:MTH00209 385 AAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
14-455 |
1.67e-56 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 199.92 E-value: 1.67e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKLRRMWAFPN---ILLLSIVMIFSVDLSiqqinrSSIYQYVWSWTINNDF--SFELGylIDSL 88
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPG------TGGFQFVESYPWIPSLgiSYHLG--VDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 89 TSIMSILITTVGIFVLIYSDNYMSHDQGylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPA 166
Cdd:COG1008 84 SLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 167 AANacqKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVHFLFvtlcASLLFAGAVaKSAQFPLHVWL 246
Cdd:COG1008 162 AAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF----LAFFIAFAV-KVPMFPFHTWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 247 PDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTM 320
Cdd:COG1008 233 PDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 321 SQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLVG 397
Cdd:COG1008 309 SHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 55978662 398 TLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLN 455
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
22-447 |
1.07e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 191.52 E-value: 1.07e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 22 LLLFPTATKKLRRMWAFpnilllsIVMIFSVDLSIQQINRSSIYQyvwsWTINNDFSFELGY--LIDSLTSIMSILITTV 99
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE----WEIFTISSSPINFtiILDPTGTLFSSTVLFI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 100 GIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPAAANACQKAFVTNR 179
Cdd:MTH00207 70 SANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 180 IGDFGLLLGIL----GFYWITGSFEFQDlfeiFNNLIynnevhflfvTLCASLlfaGAVAKSAQFPLHVWLPDAMEGPTP 255
Cdd:MTH00207 149 IGDVMLLLSIGwtlnQGHWSITNMWQTD----MNNYI----------ALSIMI---AAMTKSAQMPFSSWLPAAMAAPTP 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 256 ISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 335
Cdd:MTH00207 212 VSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMP 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 336 RAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDE 415
Cdd:MTH00207 292 KLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDL 363
|
410 420 430
....*....|....*....|....*....|....*
gi 55978662 416 ILSNSwLYSP---IFAIIAWSTAGLTAFYMFRIYL 447
Cdd:MTH00207 364 ILESS-LFYPhnsLMILMIFLATALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
12-443 |
2.83e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 195.26 E-value: 2.83e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 12 LPIPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFSVDLSIQQINRSSI-YQYVWSWTI-NNDFSFELGYLIDSLT 89
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 90 SIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwfTRPAAAN 169
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 170 ACQKAFVTNRIGDFGLLLGILGFYWITGSfefQDLFEIFNNLIYNNEVHFLFVTlcASLLFAGAVAKSAQFPLHVWLPDA 249
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 250 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 329
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 330 LGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPP 406
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 55978662 407 LACFWSKDEILSnSWLYSPIFAIIAW---STAGLTAFYMF 443
Cdd:PRK12650 386 LFGFVSKEGMLT-AFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-452 |
6.23e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 188.26 E-value: 6.23e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPILIgmglllfPTATKKLRRMWAFPNI--LLLSIVMIFSVDLSIQQINRSS---IYQyVWSWTInndfSFE 80
Cdd:PRK12667 8 LTPILLVLFAFLL-------PLLSILLKGNRKIQKIyaLLVSLITLILSILLFIQVYSSNkpiVYL-FGGWPA----PIG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 81 LGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 160
Cdd:PRK12667 76 IVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 WFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHfLFVTLCASLLFAGAVA----- 235
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGG-LAGNPPLALGVALALAlwaft 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 236 -KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPYIMNLISLIGIITVLLGATLA 305
Cdd:PRK12667 235 iKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMM 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 306 LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGG 382
Cdd:PRK12667 314 VVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAG 384
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 383 LRKHVPITQIAFLVGTLSLCGIPPLACFWSKdEILSNSWLYS--PIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:PRK12667 385 LGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-445 |
3.30e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 185.47 E-value: 3.30e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPiLIGMGLLLFPTATKKLRRMWAFpnilLLSIVMIFSVDLSIQQINRSSIYQYV---WS--WTInndfsfe 80
Cdd:PRK08375 4 HLLPLLVAVP-LLAAALIVLLPKRRRLRWALAL----LVAALTFALAISLLPQVLDGGVIAYVvggWPpgIGI------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 81 lGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGylRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 160
Cdd:PRK08375 72 -ELRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 WFTRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliynnEVHFLFVTLcaSLLFAGAVAKSAQF 240
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 241 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGL 315
Cdd:PRK08375 220 PLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 316 AYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVFMGGLRKHVPITQI 392
Cdd:PRK08375 300 AYSTVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAA 370
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 55978662 393 AFLVGTLSLCGIPPLACFWSKDEILSNS---WLYSPIFAIIAWSTagLTAFYMFRI 445
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAveaGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-452 |
2.86e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 183.37 E-value: 2.86e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKLRRMWAfpnILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINN-------DFSFELGYLID 86
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgsgGFPIRIIWEVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 87 SLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPA 166
Cdd:PRK08376 90 LFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 167 AANACQKAFVTNRIGDFGLLLGILGFYwitGSFEFQDLFEIFNNLIYNNevhFLFVTLCASLLFAGAVAKSAQFPLHVWL 246
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENP---TVVAKIALALFIAGLAMKSGAVPVHMWL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 247 PDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPYIMNL------ISLIGIITVLLGATLALAQKDIKRGLAYST 319
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 320 MSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLR 384
Cdd:PRK08376 320 VSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGLA 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 55978662 385 KHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-445 |
3.46e-45 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 167.99 E-value: 3.46e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFSVdlsiqqinrssiyqyVWSWTINNDFSFELGYLI 85
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALL---------------LLALGGGTGTAFGGMFVV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 86 DSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTS-MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 164
Cdd:COG1007 69 DGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 165 PAAANACQKAFVtnrIGDFG---LLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhfLFVTLCASLLFAGAVAKSAQFP 241
Cdd:COG1007 149 RRSSEAALKYFL---LGALSsgfLLYGISLLYGATGSLNLAGIAAALAAGGANS----PLLLLGLVLVLAGLAFKLSAVP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 242 LHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYS 318
Cdd:COG1007 222 FHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 319 TMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMVFMGGLRKHVPITQIAFL 395
Cdd:COG1007 301 SIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMT 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 55978662 396 VGTLSLCGIPPLACFWSKDEILSNSW---LYspIFAIIAWSTAGLTAFYMFRI 445
Cdd:COG1007 373 IFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
62-413 |
5.69e-41 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 158.62 E-value: 5.69e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 62 SSIYQYVWSWTIN---------NDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLfnTSML 132
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 133 GLVTSSNLIQIYIFWELVGMCSYLLI--GFWFTRPAAAnacqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeIFNN 210
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMVpmGKKESRKASL----KYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 211 LIynNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP--------- 278
Cdd:PRK08668 186 LI--NDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefg 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 279 LFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLG 355
Cdd:PRK08668 264 TYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLI 343
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 55978662 356 SGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSK 413
Cdd:PRK08668 344 FAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-445 |
2.28e-40 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 154.59 E-value: 2.28e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFsvdlsiqqinrssiyqYVWSWTINNDFSFELGYLI 85
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVAL----------------LFVLGAAGGGTAFGGMLVV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 86 DSLTSIMSILITTVGIFVLIYSDNYMShDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 165
Cdd:PRK05777 72 DGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 166 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFE-IFNNLIYNNEVHFLFVTLCASLLFagavaKSAQFPLHV 244
Cdd:PRK05777 151 RSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLLVGLAF-----KLSAVPFHM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 245 WLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMS 321
Cdd:PRK05777 226 WTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 322 QLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmvfMGGLRKHVPITQIAFLVGT 398
Cdd:PRK05777 305 HAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTIFM 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 55978662 399 LSLCGIPPLACFWSKDEILSNS------WLyspifAIIAWSTAGLTAFYMFRI 445
Cdd:PRK05777 377 LSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
85-452 |
8.64e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 155.82 E-value: 8.64e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGY----LRFFayMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 160
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 WFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynNEVHF--LFVTLCASLLFAGAVAKSA 238
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 239 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIP-----YIMnLIslIGIITVLLGATLALAQKDIK 312
Cdd:PRK06521 226 LVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgVLV-LA--LGAISAVLGVLYALAEHDLK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 313 RGLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMV 378
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDME 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 379 FMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSK----DEILSNSWLYS-------PIFAIIAWSTAGLTAFYMFRIYL 447
Cdd:PRK06521 373 KLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPGLPQwglklavPIAAAMLALTAALAAMCFVKFYG 452
|
....*
gi 55978662 448 LTFEG 452
Cdd:PRK06521 453 ITFLG 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
14-455 |
1.38e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 152.66 E-value: 1.38e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKLRR---MWAFPNILLLSIVMIFSVDLSIQQINrsSIYQYVWSWTINndFSFELGylIDSLTS 90
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARwiaLIGTLLTLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 91 IMSILITTVGIFVLIYSDNYMSHDQGylrffAYMSLF---NTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGFW--FT 163
Cdd:PRK05846 86 LLVVLTALLTPLAVLASWEEIKKRVK-----FYMAALlwlEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 164 RPAAANacqKAFVTNRIGDFGLLLGILGFYWI----TGSFEFQDLFeifNNLIYNNEVHFLFVtlcaSLLFAGAVaKSAQ 239
Cdd:PRK05846 159 RIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFL----AFFIAFAV-KMPM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 240 FPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIP-YIMNLISLIGIITVLLGATLALAQKDIKRGLAY 317
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 318 STMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAF 394
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFF 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55978662 395 LVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLN 455
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
14-461 |
1.72e-37 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 146.24 E-value: 1.72e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKLRRMWAFPN---ILLLSIVMIFSVDLSiqqinrSSIYQYV--WSWTINNDFSFELGylIDSL 88
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPT------GSGFQFTedIPWIPALGISYHLG--VDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 89 TSIMSILITTVGIFVLIYSDNYMSHDQGYlrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAA 168
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 169 NACQKAFVTNRIGDFGLLLGILGFYWITG-SFefqDLFEIFNNLIYNNEVHFLFVtlcaSLLFAGAVaKSAQFPLHVWLP 247
Cdd:TIGR01972 156 YAAMKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL----AFFIAFAV-KVPLFPLHTWLP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 248 DAM-EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 322
Cdd:TIGR01972 228 DAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 323 LGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVFMGGLRKHVPITQIAFLVGTL 399
Cdd:TIGR01972 305 MGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAM 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 400 SLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNY 461
Cdd:TIGR01972 376 ASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
86-360 |
2.19e-37 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 146.77 E-value: 2.19e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 86 DSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 165
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 166 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFlfvtlCASLLFAGAVAKSAQFPLHVW 245
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQA-----AALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 246 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 325
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|....*
gi 55978662 326 MMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 360
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-445 |
9.90e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 141.49 E-value: 9.90e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPILIGMGLLLFPTATKK--LRRMWAFPNILLLSIVMIFSVDLSIQQINRSSiyqyvwsWTINNDFSFELGY 83
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATKKdsFIRNFLLITISIFFFGNILLIDLLFLKGIRAQ-------FELMDFGNYSIGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 84 LIDSLTSIMSILITTVGIFVLIYSDNYMSHD--QGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 161
Cdd:PRK06589 80 HLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 162 FTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDlfeifNNLIYNNEVHFLFvtlcasLLFAGAVAKSAQFP 241
Cdd:PRK06589 160 RNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------LMFIYGIAKTAIFP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 242 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM------NLISLIGIITVLLGATLALAQKDIKRGL 315
Cdd:PRK06589 229 VHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKALKTDNIKKIL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 316 AYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVFMGGLRKHVPITQI 392
Cdd:PRK06589 309 AYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISF 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 55978662 393 AFLVGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPIFAIIAWSTAGLTAFYMFRI 445
Cdd:PRK06589 380 IISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
77-450 |
2.41e-35 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 140.82 E-value: 2.41e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 77 FSFELGYLIDSLtsIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 156
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 157 LIGF---WFTRPAAANAcqkaFVTNRIGDFGLLLgilgfywitgsfefqdlfeIFNNLIYNNEVHFLFVTLCAS---LLF 230
Cdd:MTH00095 115 LVLFynnWDSNSGAMNT----ALTNRIGDFFIFL-------------------FFSGFIFSSYYFFSFSFFSSSmilMLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 231 AGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpYIMNLISLIGIITVLLGATLALAQKD 310
Cdd:MTH00095 172 LTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEED 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 311 IKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgYSPDKSQNMVFMGGLRKHVpit 390
Cdd:MTH00095 251 MKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN-----FGQQDGRNYSNNGNLPMFI--- 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 391 QIAFLVGTLSLCGIPPLACFWSKDEILSNSWL--YSPIFAIIAWSTAGLTAFYMFRIYLLTF 450
Cdd:MTH00095 323 QLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-452 |
1.30e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 137.78 E-value: 1.30e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 14 IPILIGMGLLLFPTATKKLRRMWAFPNILLLSIVMIFSVDLSIQQINrssiyqyvwswtinndfSFELGYLIDSLTSIMS 93
Cdd:PRK07234 11 LPFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLD-----------------NFGVTLRADALSGYFI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 94 ILITTVGIFVLIYSdnyMSHDQGylRFFAYMSLFNTSMLGLV-TSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQ 172
Cdd:PRK07234 74 LTNALVTLAVIFYC---WESAKT--RFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 173 KAFVTNRIGDFgLLLGILGFYWITGSFEFQDLFEIfnnliynnevhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG 252
Cdd:PRK07234 149 YLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSE 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 253 PTPISALIHAATMVAAGIFLVARLLplfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 332
Cdd:PRK07234 214 AEPPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 333 GsyraALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVFMGGLRKHVPITqiaflVGTLSLCGIPPLACFWS 412
Cdd:PRK07234 291 G----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVS 351
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 55978662 413 KDEILSNswlYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:PRK07234 352 KVLTLKN---LLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
16-413 |
2.71e-34 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 139.10 E-value: 2.71e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 16 ILIGMGLLLFPTAT-----KKLRRMWAFpNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFSFElgylIDSLTS 90
Cdd:PRK08667 6 FLGAILLLLAAAVIplvfrHKRKRVWQS-VLWLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 91 IMSILITTVGIFVLIYSDNYMSHDQGYLR---FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAA 167
Cdd:PRK08667 81 FFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEET 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 168 ANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfeifnnliynnEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLP 247
Cdd:PRK08667 161 QRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 248 DAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 326
Cdd:PRK08667 230 YAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 327 MLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQI 392
Cdd:PRK08667 310 LMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSA 380
|
410 420
....*....|....*....|.
gi 55978662 393 AFLVGTLSLCGIPPLACFWSK 413
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
3-429 |
6.31e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 133.13 E-value: 6.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 3 YSWIIPFVPLpIPILIGMGLLLFPtatkkLRRMWAFPNILLLSIVMIFSVDLSIQQINRSSIyqyvwswtinndFSFELG 82
Cdd:PRK06458 3 YSILFALLLL-IPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLW 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 83 YLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQ-------GYLRFFAYM-SLFNTSMLGLVTSSNLIQIYIFWELVGMCS 154
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 155 YLLIGFWFTRpAAANACQKAFVTNRIG-DFGLLLGILGFYWITGSFEFQDLFEIFNNLI-YNNEVHFLFVTLCASLLFAG 232
Cdd:PRK06458 145 ALLVGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 233 AVAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYIM------------NLISLIGIIT 297
Cdd:PRK06458 224 FGTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIFGLLS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 298 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKS 374
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GT 362
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 375 QNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNS-----WLYSPIFAI 429
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILLLL 422
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
123-452 |
3.66e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.96 E-value: 3.66e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 123 YMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 199
Cdd:PRK08377 110 YAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG-EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 200 EFQDLFEIFNNLiyNNEVhflfVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLP 278
Cdd:PRK08377 189 NMAHIAQLAGTI--DPTV----AQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 279 LFIVIP---YIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALL 352
Cdd:PRK08377 262 LMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 353 FLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL---SNSWLYSPIFAI 429
Cdd:PRK08377 342 FLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlagLSAGYTWPVALV 412
|
330 340
....*....|....*....|....
gi 55978662 430 IAWSTagLTAFYMFR-IYLLTFEG 452
Cdd:PRK08377 413 LGASV--VEAVYYFRlIHTMWFKG 434
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
76-418 |
1.18e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 121.15 E-value: 1.18e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 76 DFSFELgYLIDSLTSIMSILITTVGIFVLIYSdnYMSHDQG-YLRFFAYMSlfntSMLGLVTSSNLIQIYIFWELVGMCS 154
Cdd:PRK12668 57 GFDLVL-GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 155 YLLIgfWFTR-PAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNnliynnevhflfvTLCASLLFAGA 233
Cdd:PRK12668 130 TFLV--WARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGF 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 234 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYImnlisliGIITVLLGATLALAQKDIKR 313
Cdd:PRK12668 194 GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYI-------GAAMAVYGVFFALLENDLRR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 314 GLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMVFMGGLRKHVPIT 390
Cdd:PRK12668 267 LLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLT 337
|
330 340
....*....|....*....|....*...
gi 55978662 391 QIAFLVGTLSLCGIPPLACFWSKDEILS 418
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMIIS 365
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-469 |
2.56e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.90 E-value: 2.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 6 IIPFVPLPIPILIGMGLLLFPTATKKLRRMwAFPNILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFSfelgyli 85
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFA------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 86 dslTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 165
Cdd:TIGR01770 73 ---LLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 166 AAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevHFLFvtLCASLLFAGAVAKSAQFPLHVW 245
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLL--LGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 246 LPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 323
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 324 GYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAIVGYSPDksqNMVFMGGLRKHVPITQIAFLVGTLS 400
Cdd:TIGR01770 306 GYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFMFS 378
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 401 LCGIPPLACFWSKDEI---LSNSWLYSpiFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNYSGKKSSSF 469
Cdd:TIGR01770 379 LAGIPPLAGFFGKFYVffaLLKSGLYW--LAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
85-383 |
7.23e-28 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 118.21 E-value: 7.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSlFNTSMLGLVTSSNLIQIY-IFWELVGMCSYLLIGFWFT 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFT-FTTGFASLAWLSGDLRLMaLCWGATLLGLTLLIGLNKG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 164 RPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEfqdlfeIFNNLIYNNEVHF-LFVTLCASLLFAGAV-AKSAQFP 241
Cdd:PRK08601 149 WKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQ------LTSVLSNENLAQLgTWEKTGINLLLILAVmIPAAQWP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 242 LHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPYIMNLIslIGIITVLLGATLALAQKDIKRGLAYSTM 320
Cdd:PRK08601 223 FQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGSTM 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 55978662 321 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVFMGGL 383
Cdd:PRK08601 300 AQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-452 |
1.23e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 114.28 E-value: 1.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 10 VPLPIPILIGMgLLLFPTATKKLRRMWAFpniLLLSIVMIFSVDLSIQQINRSSIYQYVWSWtinnDFSFELGYLIDSLT 89
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVAL---IGSLLTLVAAIILVANVYKHGIQTLELGNW----KAPFGIVFVADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 90 SIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAAN 169
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 170 ACqKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflFVTLCASLLFAGAVAKSAQFPLHVWLPDA 249
Cdd:PRK07691 160 SI-KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 250 MEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 326
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 327 MLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmvfMGGLRKHVPITQIAFLVGTLSLCG 403
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 55978662 404 IPPLACFWSKDEILSNSWLY-SPIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
4-450 |
2.02e-26 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 113.51 E-value: 2.02e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 4 SWIIpFVPLPIPILIGMGLLLFPTATKkLRRMWAFPNILLLSIVmifSVDLSIQQINRSSIYQYVWSWTInndfSFELGY 83
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLI---SLALLIYVQRHGPITLDFGGWLP----PFGIQF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 84 LIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 163
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 164 RPAAANACQKAFVtNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVhflfvTLCASLLFAGAVAKSAQFPLH 243
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL-----TTIALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 244 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPYIMN-LISLIGIITVLLGATLALAQKDIKRGLAYSTM 320
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 321 SQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmvfMGGLRKHVPITQIAFLVG 397
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 55978662 398 TLSLCGIPPLACFWSKDEILS------NSWLYSPIFAiiawsTAGLTAFYMFRIYLLTF 450
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQgaldngAYILLALMLI-----TSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
41-450 |
8.44e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 108.81 E-value: 8.44e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIqqiNRSSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRF 120
Cdd:MTH00063 2 VLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 121 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 200
Cdd:MTH00063 79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 201 FQDLFeifnnliynnevhFLFVTLcasllfagavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLF 280
Cdd:MTH00063 158 LCCLF-------------FFLIVF----------TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 281 IVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIi 360
Cdd:MTH00063 214 LGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 361 hsmeaIVGYSPDKSQNMVFMGGLRKHVPITQIAFLVgtLSLCGIPPLACFWSKDEILSN--SWLYSPIFAIIAWSTAGLT 438
Cdd:MTH00063 293 -----MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFLS 365
|
410
....*....|..
gi 55978662 439 AFYMFRIYLLTF 450
Cdd:MTH00063 366 YLYSFRLCLILF 377
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-445 |
1.94e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 107.51 E-value: 1.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 7 IPFVPLPIPILIGMGLLLfptaTKKLRRMWAFPNILLLsIVMIFSVDLSIQQINRSSIYQYVWSWTInnDFSFELGylID 86
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKIISCIVVA-VSFFIALVLFVQVYSGGVIKYSLGGWGP--PYGIELR--VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 87 SLTSIMSILITTVGIFVLIYSdNYMSHDQ----GYLRFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 162
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 163 TRPAAANACQkAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHF--LFVTLcasllfaGAVAKSAQF 240
Cdd:PRK12662 155 DKKALVAAFE-YLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIgvLFIMV-------GLFIKAALF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 241 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPYIMNLISLIGIITVLLGATLALAQKDIKR 313
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 314 GLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVFMGGLRKHVPIT 390
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKI 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 391 QIAFLVGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPIFAIiawsTAGLTAFYMFRI 445
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILdafikSNAWIGLVVLLV----GSGLSVIYVWKI 432
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
41-474 |
3.84e-22 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 100.46 E-value: 3.84e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIQQINRS------------SIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSD 108
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 109 NYMSHDQGYLRFFayMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwftrpaaanaCQKAFVTNRIGDFGL 185
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 186 LLG-----IL--GFYWITGSF--EFQdLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEG-PTP 255
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGLSggEIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 256 ISALIhAATMVAAGIFLVARLLPlfIVIPYIMN----LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALG 331
Cdd:CHL00049 248 VVAFL-SVTSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGII 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 332 MGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFW 411
Cdd:CHL00049 325 VGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55978662 412 SKDEILSNSW---LYSPIFaiIAWSTAGLTAFYMFRIYLLTFEGH---LNIHFQNYSGKKSSSFYSIKL 474
Cdd:CHL00049 400 GKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
12-461 |
6.98e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 96.70 E-value: 6.98e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 12 LPIPILIGMGLLLFPTATKKLRRMWAFPN--ILLLSIVMIFSVDLSIQQINrssiYQYVWSWTINNDFSFELGylIDSLt 89
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPWNEPLGLSYSLG--VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 90 SIMSILITTVGIFVLIYSDNYMSHDQGYlrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAAn 169
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGY- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 170 ACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLfvtlcaSLLFAGAVAKSAQFPLHVWLPDA 249
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 250 MEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPYIMNLIS----LIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 324
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 325 YMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVFMGGLRKHV---PITQIAFLVGT 398
Cdd:PRK07363 309 YILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAG 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 55978662 399 LSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNY 461
Cdd:PRK07363 380 MASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
41-460 |
4.40e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 94.00 E-value: 4.40e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIQQINRSSIYqyvwSWTINNDFSFELGylIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYlrf 120
Cdd:PRK06473 39 LLLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY--- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 121 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 200
Cdd:PRK06473 110 YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 201 FQdlfeiFNNLIYNNEVHFLFVTLCASLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LP 278
Cdd:PRK06473 189 FD-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 279 LFI-VIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFL 354
Cdd:PRK06473 262 LFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 355 GSGsiihsmeaiVGYSPDKSQNMVFMGGL---RKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIA 431
Cdd:PRK06473 342 LVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLC 412
|
410 420
....*....|....*....|....*....
gi 55978662 432 WSTAGLTAFYMFRIYLLTFEGHLNIHFQN 460
Cdd:PRK06473 413 MIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-450 |
1.20e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 92.72 E-value: 1.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 223 TLCASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITVLLG 301
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 302 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMV 378
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 55978662 379 FMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL-----SNSWLyspIFAIIAWS--TAGLTAFYMFRIYLLTF 450
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
85-452 |
3.97e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.35 E-value: 3.97e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMSHDQ----GYLrffayMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGf 160
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 161 wftrpaaanaCQKA----FVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNEVHFLFVTLCAslLFAGAVak 236
Cdd:PRK08042 132 ----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFG--LLAGII-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 237 saqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpyimnLISLIGIITVLLGATLALAQKD 310
Cdd:PRK08042 198 ----PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 311 IKRGLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGYspdksQN 376
Cdd:PRK08042 269 IQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RD 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 377 MVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEI------LSNSWLY-----SPIFAIIAWSTAGLTAFYMFRI 445
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKV 419
|
....*..
gi 55978662 446 YLLTFEG 452
Cdd:PRK08042 420 YGVTFLG 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
130-430 |
4.09e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 86.62 E-value: 4.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 130 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFN 209
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 210 NLIYNNEVHFLF--VTLCASLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYI 286
Cdd:MTH00196 85 SGQSFSSVSVPIgyLLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 287 MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsm 363
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 55978662 364 eAIVGYSPDKSQnMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAII 430
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFL 287
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
41-417 |
5.76e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 84.30 E-value: 5.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLsIQQINRSSIYQYVWSWTINNDFsfelgYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRF 120
Cdd:MTH00199 26 TLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGL-----LLTNSWIIISKIIIIIGSISILLMGSGETILSEGGQSS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 121 FAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFE 200
Cdd:MTH00199 100 PILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 201 FQDlfeifNNLIYNNEVHFLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllPL 279
Cdd:MTH00199 180 IQG-----INSILTGDVGKILITI--SLLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------SI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 280 FIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLGS 356
Cdd:MTH00199 240 LVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSICS 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55978662 357 GSIIHSMEAIVGYspdksqnMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEIL 417
Cdd:MTH00199 316 FSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
120-431 |
6.10e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 84.31 E-value: 6.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 120 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPAAANacqKAFVTNRIGDFGLLLGILGFYWITG 197
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 198 SFEFqDLFEIfnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV-- 273
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmg 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 274 --------ARLLPLFIVipYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALF 340
Cdd:PRK12561 232 gyalirfnVQMLPDAHV--YFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAML 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 341 HLITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEI---L 417
Cdd:PRK12561 308 QMISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgI 378
|
330
....*....|....
gi 55978662 418 SNSWLYSPIFAIIA 431
Cdd:PRK12561 379 TSSDVYSSTFRTIT 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
80-425 |
6.91e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 84.04 E-value: 6.91e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 80 ELGYLIDSLTSIMSILITTVG-IFVLIYSDNYMSH-------DQGYLR-FFAYMSLFNTSMLGLVTSSNLIQIYIFWELV 150
Cdd:PRK08676 55 ESRYLFIDHLGIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 151 GMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLlGILGFYWIT------GSFEFQDLfeifnnLIYNNEVHFLFVTL 224
Cdd:PRK08676 135 TVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLGA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 225 CASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYIMNLISLIGIITVLL 300
Cdd:PRK08676 208 SFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 301 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKSQNm 377
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR- 359
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 55978662 378 vfMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSP 425
Cdd:PRK08676 360 --IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISV 405
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
41-413 |
2.76e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 82.41 E-value: 2.76e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIQQINR------------SSIYQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSD 108
Cdd:PRK02504 20 IVILTLLGVLLVDLIGGRTASrwlpylaiaglgAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSW 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 109 NYMshDQGYLRFFAYMSLFNTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGL 185
Cdd:PRK02504 100 RYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 186 LLGILGFYWITGSFefQDLFEIFNNLIYNNEVhflfvTLCASLLF--AGAVAKSAQFPLHVWLPDAMEG-PTPISALIHA 262
Cdd:PRK02504 178 LYGSSLLYGLSGGS--TQLSAIALALITSPSL-----GLALALVFviAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 263 ATMvAAGIFLVARLLPLfiVIPYIMN----LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---Y 335
Cdd:PRK02504 251 GSK-AAGFALAIRLLVT--AFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagY 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 336 RAALFHLITH------AYSKALLF-LGSGSiihsmEAIVGYSpdksqnmvfmgGLRKHVPITQIAFLVGTLSLCGIPPLA 408
Cdd:PRK02504 328 ASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 55978662 409 CFWSK 413
Cdd:PRK02504 392 GFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
65-413 |
3.48e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 78.53 E-value: 3.48e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 65 YQYVWSWTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLrFFAYMSLfnTSMLGLVTSSNLIQIY 144
Cdd:PRK06277 50 YYYFGGHGLVNGYHSGITYLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLY 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 145 IFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFgLLLGILGFYWITGSFEFQDLfeifNNLIYNNEVHFLFVtL 224
Cdd:PRK06277 127 VFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-G 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 225 CASLLFAGAVAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPYIMNLISLIGIITVLL 300
Cdd:PRK06277 201 GLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVF 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 301 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNM 377
Cdd:PRK06277 280 GVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNL 350
|
330 340 350
....*....|....*....|....*....|....*.
gi 55978662 378 VFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSK 413
Cdd:PRK06277 351 RKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
71-121 |
6.89e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 63.60 E-value: 6.89e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 55978662 71 WTINNDFSFELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLRFF 121
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
139-443 |
8.76e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 68.02 E-value: 8.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 139 NLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfNNLIYNNEVH 218
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 219 FLFVTlcaslLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIMNLISLIGII 296
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 297 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDK 373
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 374 SQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMF 443
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
228-441 |
6.48e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 65.26 E-value: 6.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 228 LLFAGAV-------AKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYIMNLISLI 293
Cdd:PRK12666 208 LLEAGAAlllvvflIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 294 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSI 359
Cdd:PRK12666 286 GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 360 IHSMEAivgYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILS---------NSWLY------S 424
Cdd:PRK12666 366 AVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllS 442
|
250
....*....|....*..
gi 55978662 425 PIFAIIAWSTAGLTAFY 441
Cdd:PRK12666 443 GLAALIALTRAGIRLFW 459
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
120-449 |
7.58e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 65.11 E-value: 7.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 120 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGI-LGFYWITGS 198
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 199 FEFQDLfeifnnliYNNEVHFLFVTLC-ASLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV---- 273
Cdd:PRK02546 197 FDMTAL--------AAKDFGLGFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggy 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 274 ------ARLLPlfIVIPYIMNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHL 342
Cdd:PRK02546 262 allrmnAGMLP--DAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQM 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 343 ITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNMVF--MGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEI---L 417
Cdd:PRK02546 338 ISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgF 406
|
330 340 350
....*....|....*....|....*....|..
gi 55978662 418 SNSWLYSPIFAIIAWSTAGLTAFyMFRIYLLT 449
Cdd:PRK02546 407 ATSDAYTLPFRVVVVFLAAVGVI-LTPIYLLS 437
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
131-405 |
1.74e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 63.93 E-value: 1.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 131 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIfnn 210
Cdd:MTH00204 125 LIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--- 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 211 LIYNNEVHFLFVTLcasllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YIMN 288
Cdd:MTH00204 202 KLPLSIQKWLLVGF-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAP 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 289 LISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmea 365
Cdd:MTH00204 277 LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL------ 350
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 55978662 366 ivgYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIP 405
Cdd:MTH00204 351 ---YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
85-462 |
2.20e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 63.42 E-value: 2.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 85 IDSLTSIMSILITTVGIFVLIYSDNYMsHDQGYLRFFAYMSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFW 161
Cdd:MTH00206 57 YDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 162 FTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqDLFEIFNNLIYNNEVHFLFVTLcasllfaGAVAKSAQFP 241
Cdd:MTH00206 136 GNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 242 LHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYIMNLISLIGIITVLLGATLA----LAQKDIKR 313
Cdd:MTH00206 208 VHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQTDLKS 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 314 GLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMVFMGGLRKHVPI 389
Cdd:MTH00206 281 LIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPL 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 55978662 390 TQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNYS 462
Cdd:MTH00206 351 LSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
90-359 |
3.77e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 62.89 E-value: 3.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 90 SIMSILITTVGIFVLIYSDNYmSHDQGYLRffaymSLFNTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWftrpa 166
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIALT----- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 167 aANACQKAFVTNRIGDFGLLLGILGFYW---ITGSFEFQdlfeifnnliynnevhFLFVTLCASLLFAGAVAKSAQFPLH 243
Cdd:PRK06459 116 -KKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFS----------------YLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 244 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--YIMNLISLIGIITVLLGATLALAQKDIKRGLAYST 319
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 55978662 320 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 359
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
219-445 |
4.58e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 62.95 E-value: 4.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 219 FLFVTLcaSLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyIMNLISLIGIIT 297
Cdd:MTH00198 302 YLFITV--AILFKLAAA-----PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 298 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 377
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 378 VFMGG---LRKHVPIT-------QIAFLVGT--LSLCGIPPLACFWSKDEILSNS----WLYS-PIF---AIIAWSTAGL 437
Cdd:MTH00198 446 GSFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 55978662 438 TAFYMFRI 445
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
131-355 |
5.59e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 58.91 E-value: 5.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 131 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFeifnN 210
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----C 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 211 LIYNNEV-HFLFVtlcasLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYIM 287
Cdd:MTH00217 198 LKIEKELqYFIFL-----GFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFS 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 55978662 288 NLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLG 355
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
219-431 |
3.87e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 55.66 E-value: 3.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 219 FLFVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMnlisLIGIITV 298
Cdd:MTH00144 80 LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 299 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALgMGSYRAALFHLITHAYSKALLFLGSGSiihsmeaivgyspdKSQNMV 378
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAI-LHGSWLMWMYFLIYIVSSGFLFFSLWS--------------GDSGSM 220
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 55978662 379 FMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIA 431
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
126-357 |
4.11e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.49 E-value: 4.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 126 LFNTSML-------GLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTnRIGDFGLLLGIL--GFYwit 196
Cdd:CHL00011 113 LFYFLMLamysgqiGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 197 GSFEFQDLFEIFNNLIYNNEVHFLFVTlcaSLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA- 274
Cdd:CHL00011 189 GSNEPTLNFETLANQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMg 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 275 ---------RLLP--LFIVIPYIMnlisLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RAA 338
Cdd:CHL00011 258 ayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGA 331
|
250
....*....|....*....
gi 55978662 339 LFHLITHAYSKALLFLGSG 357
Cdd:CHL00011 332 ILQIISHGFIGAALFFLAG 350
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-328 |
9.70e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 54.79 E-value: 9.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 83 YLIDSLTSIMSILITTVGIFVLIYSDN--------YMSHDQGYLrFFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCS 154
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 155 YLLIGFWfTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFnnliyNNEVHFLFVTLCASLLFAGAV 234
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 235 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFIVIPY------IMNLISLIGIITVLLGATLALAQ 308
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 55978662 309 KDIKRGLAYSTMSQLGYMML 328
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
135-445 |
9.33e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.51 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 135 VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNnliyn 214
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLS----- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 215 nevhflfvtlcASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIvipyiMNLISLIG 294
Cdd:MTH00200 95 -----------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-----SNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 295 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKS 374
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 55978662 375 QNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYS-PIFAIIAWSTAGLTAFYMFRI 445
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
41-353 |
1.31e-06 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 51.28 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 41 ILLLSIVMIFSVDLSIQQINRSSIYQYVWSWTINNDFS-FELGYLIDSLTSIMSILITTVGIFVLIYSDNYMSHDQGYLR 119
Cdd:MTH00014 12 LLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSmFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 120 FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSF 199
Cdd:MTH00014 92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 200 EFqdlfeifnnLIYNNEVHFLFVT-LCASLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL----- 272
Cdd:MTH00014 172 SM---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggy 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 273 -VARLLPLFiviPYIMNLISLIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLIT 344
Cdd:MTH00014 236 gLLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIA 312
|
....*....
gi 55978662 345 HAYSKALLF 353
Cdd:MTH00014 313 HGLCSSALF 321
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
140-460 |
3.09e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 50.34 E-value: 3.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 140 LIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLfEIFNNLIYNNEVHF 219
Cdd:MTH00127 116 IIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADK 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 220 LFVTLCaslLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYIMNLISLIGI 295
Cdd:MTH00127 195 LWWAGC---LLAFLV-KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 296 ItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFlgsgsiihsMEAIVGYSPD 372
Cdd:MTH00127 271 I---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALF---------CLANTNYERT 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 373 KSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEG 452
Cdd:MTH00127 339 HSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRG 418
|
....*...
gi 55978662 453 HLNIHFQN 460
Cdd:MTH00127 419 PLPDHIIA 426
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
241-410 |
3.51e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 49.82 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 241 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPYI-MNLISLIGIITVLLGATLALAQKDIKRGLAYST 319
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 320 MSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMeaivgyspdKSQNMVFMGGLRKHVPITQIAFLVGTL 399
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLTLL 249
|
170
....*....|.
gi 55978662 400 SLCGIPPLACF 410
Cdd:MTH00112 250 SLAGLPPLTGF 260
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
136-457 |
6.79e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 49.14 E-value: 6.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 136 TSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQK-AFVTnRIGDFGLLLGILGFYWITGSFEFQdLFEIFNNLIYN 214
Cdd:MTH00068 111 SATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSLI-LLELMSPMQLM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 215 NEVHFLFVTLCaslLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIVI 283
Cdd:MTH00068 189 TYTNKIWWLAC---LLAFMV-KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKEL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 284 PYIMNLISLIGiitVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsi 359
Cdd:MTH00068 258 SYPFIILALWG---VLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----- 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 360 ihsmeAIVGYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTA 439
Cdd:MTH00068 330 -----ANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITA 404
|
330
....*....|....*...
gi 55978662 440 FYMFRIYLLTFEGHLNIH 457
Cdd:MTH00068 405 AYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
74-473 |
3.92e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 46.44 E-value: 3.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 74 NNDFSFELGYLIDSLTSIMSILIttvgiFVLIYSDNYMSHDQGYLRFFAYMSLFntSMLGLVTSSNLIQIYIFWELVGMC 153
Cdd:MTH00094 25 NNYSWSGLFFFFDSFVFVLLIFM-----MVFILGLVLLSEKNFNLLILSNLLIL--ICLLFFVSSNMLMLYMFFELSMFP 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 154 SYLLIGFWFTRPAAANACQkafvtnrigdfglllgILGFYWITGSFEFqdLFEIFNNLIYNNEVHFLFVT--LCASLLFA 231
Cdd:MTH00094 98 ILIMILGYGSQIEKINSSY----------------YLLFYAAFFSFPF--LFVYLKNFFFFSLCYFDFFLswEMFFILSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 232 GAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFIVIpyIMNLISLIGIITVLLGATLALAQKD 310
Cdd:MTH00094 160 SFMMKFPVYFLHLWLPKAhVEAPTTASMLL-AGLLLKLGTAGFLRILGSLNFV--YNNFWIIFSLLGMILSSFCCVFQSD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 311 IKRGLAYST---MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVFMGGLRKHV 387
Cdd:MTH00094 237 SKSLAAYSSvthMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS---------KSRLIYFMNSFFSSS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 388 PITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFaiiawstagltAFYMFRIYLLTFEGHLNIHFQNYSGKKSS 467
Cdd:MTH00094 308 MFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFS-----------FFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
....*.
gi 55978662 468 SFYSIK 473
Cdd:MTH00094 377 NFNNFN 382
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
221-474 |
5.92e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 45.82 E-value: 5.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 221 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYIMNLISLI--GIITV 298
Cdd:MTH00197 77 LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSVLSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 299 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMV 378
Cdd:MTH00197 148 LIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 379 FmgglrkhvpitqiaFLVGTLSLCGIPPLACFWSKDEILSN--SWLYSPIFAIIAWSTAgLTAFYMFRIYLLTFeghLNI 456
Cdd:MTH00197 228 F--------------LGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL---ILS 289
|
250
....*....|....*...
gi 55978662 457 HFQNYSGKKSSSFYSIKL 474
Cdd:MTH00197 290 NWMINFLMKINLLYSGLF 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
226-445 |
6.31e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.54 E-value: 6.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 226 ASLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYIMNLISLIGIITVLLGATLA 305
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 306 LAQKDIKRGLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPDKSQNmvFMGGLR 384
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTK--FNSKIS 230
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 55978662 385 KHVPITQIAFLVGTLSLCGIPPLACF---WSKDEILSNSWLYSPIFAIIAWSTAGLtaFYMFRI 445
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-430 |
7.28e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 45.88 E-value: 7.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 221 FVTLCASLLFAGAVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYIMNLISLIGIITVLL 300
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGIITAIY 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 301 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksq 375
Cdd:PRK12664 215 GIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF--------- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 55978662 376 NMVFMGGLRKhVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAII 430
Cdd:PRK12664 286 NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
130-475 |
7.33e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.69 E-value: 7.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 130 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFefqDLFEIFN 209
Cdd:MTH00041 16 GTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW---SINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 210 NLiynnevhflfvtlcASLLFAGAVA-KSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI-- 286
Cdd:MTH00041 92 TL--------------SSIIITLALAlKLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPLILLISISnl 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 287 --MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSME 364
Cdd:MTH00041 149 lnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLS 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 365 AIvgyspdksqnmvfmGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSK-----DEILSNSWLYSPIFAIIAWstagLTA 439
Cdd:MTH00041 229 HL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILIIGSL----LSL 290
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 55978662 440 FYMFRI----YLLTFEGHLnIHFQNYSGKKSSSFYSIKLW 475
Cdd:MTH00041 291 FFYLRIsfntSLTLFPQHS-ISLFSWRNSGNITVYGVILS 329
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
65-471 |
1.47e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 44.83 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 65 YQYVWSWTINNDFsfelgYLIDSLTSIMSILITTVGIFVLIYSdnymshdQGYLRFFAYMSLFNTSMLGLV-------TS 137
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 138 SNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFqdlfeIFNNLIYNNEV 217
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 218 HFLFVTLCASLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPYIMNLI 290
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 291 SL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAI 366
Cdd:MTH00150 220 LIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 367 VGYSPDKSQ--NMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLACFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFR 444
Cdd:MTH00150 289 ANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLY 368
|
410 420
....*....|....*....|....*..
gi 55978662 445 IYLLTFEGHLNIHFQNYSGKKSSSFYS 471
Cdd:MTH00150 369 LYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
78-353 |
3.99e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.43 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 78 SFELGYLIDSLTSIMsILITTVGIFVLIYSDNYMSHDQGYLRFFAYMSLFNTSMLGLVTSS-NLIQIYIFWELVGMCSYL 156
Cdd:MTH00205 48 FISSSFSFDSLSLPL-IMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVdNLLLFYITFEASLIPTLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 157 LIGFWFTRPAAANACQKAFVTNRIGDFGLLLGILGFYWITGSFEFQDLFEIFNNLIYNNevhflfvTLCASLLFAGAVaK 236
Cdd:MTH00205 127 LILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-K 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 237 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPYIMNLISLIGIITVLLGATLALAQ 308
Cdd:MTH00205 199 LPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQ 271
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 55978662 309 KDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLF 353
Cdd:MTH00205 272 VDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLCSSGMF 319
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
20-462 |
3.60e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.34 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 20 MGLLLFPTaTKKLRRMWAFPNILLLSIVMIFSVDLSIQQINrssIYQYVWSWTINNdFSFELGylIDSLTSIMSILITTV 99
Cdd:MTH00044 1 MITLILLS-LGIAITSWIVPKNKLWPISISQSSLISLLSLF---LLNNHWSSSWHN-LSLSLA--TDSLSSPLIILSCWL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 100 GIFVLIYSDNYMSHDQGYLR--FFAYMSLFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPAAANACQKAFVT 177
Cdd:MTH00044 74 APLSLLASINHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFY 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 178 NRIGDFGLLLGILGFYWITGSfefqdLFEIFNNLIYNNEVHFLFVTLCASLLFAGAVAKSAQFPLHVWLPDA-MEGPTPI 256
Cdd:MTH00044 154 TLFGSLPLLISLIAIYSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 257 SaLIHAATMVAAGIFLVARLLPLFIVIpyIMNLISLIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGM 332
Cdd:MTH00044 229 S-MILAAILLKLGGYGLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 333 GSY---RAALFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPDKSQNMVFMGGLRKHVPITQIAFLVGTLSLCGIPPLA 408
Cdd:MTH00044 306 GTNwgiNGALILMIAHGLvSSALFCL----------ANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLP 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 55978662 409 CFWSKDEILSNSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLNIHFQNYS 462
Cdd:MTH00044 376 NLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVS 429
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
207-334 |
6.70e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.42 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55978662 207 IFNNLIYNNEVHFLFVTLCASLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYI 286
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLSYLI 141
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 55978662 287 -MNLISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 334
Cdd:MTH00160 142 nNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISE 190
|
|
| |
