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Conserved domains on  [gi|545117044|ref|WP_021479720|]
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MULTISPECIES: spore cortex biosynthesis protein YabQ [Bacillus]

Protein Classification

spore cortex biosynthesis protein YabQ( domain architecture ID 10021568)

spore cortex biosynthesis protein YabQ plays an important role in cortex and coat formation, and is required for sporulation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
spore_yabQ TIGR02893
spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several ...
 2-131 8.06e-38

spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several times, is found in exactly those genomes whose species perform sporulation in the style of Bacillus subtilis, Clostridium tetani, and others of the Firmicutes. Mutation of this sigma(E)-dependent gene blocks development of the spore cortex. The length of the C-terminal region, including some hydrophobic regions, is rather variable between members. [Cellular processes, Sporulation and germination]


:

Pssm-ID: 131939  Cd Length: 130  Bit Score: 127.78  E-value: 8.06e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545117044    2 TLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGVA 81
Cdd:TIGR02893   1 SITIQFYTMISMVLSGIILGALFDTYRRFRKRQRLNKILVFIEDILFWIVQALIVFYFLLYVNEGEIRFYVFLALLCGLA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 545117044   82 TYQSLCKRIYIKILKFFIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWL 131
Cdd:TIGR02893  81 IYQALLSKYYVRILEKVITIVVKVLRFLFKLIKKLVVSPIIWILKLLIRL 130
 
Name Accession Description Interval E-value
spore_yabQ TIGR02893
spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several ...
 2-131 8.06e-38

spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several times, is found in exactly those genomes whose species perform sporulation in the style of Bacillus subtilis, Clostridium tetani, and others of the Firmicutes. Mutation of this sigma(E)-dependent gene blocks development of the spore cortex. The length of the C-terminal region, including some hydrophobic regions, is rather variable between members. [Cellular processes, Sporulation and germination]


Pssm-ID: 131939  Cd Length: 130  Bit Score: 127.78  E-value: 8.06e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545117044    2 TLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGVA 81
Cdd:TIGR02893   1 SITIQFYTMISMVLSGIILGALFDTYRRFRKRQRLNKILVFIEDILFWIVQALIVFYFLLYVNEGEIRFYVFLALLCGLA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 545117044   82 TYQSLCKRIYIKILKFFIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWL 131
Cdd:TIGR02893  81 IYQALLSKYYVRILEKVITIVVKVLRFLFKLIKKLVVSPIIWILKLLIRL 130
YabQ COG5869
Spore cortex formation membrane protein YabQ [Cell cycle control, cell division, chromosome ...
 1-157 1.56e-35

Spore cortex formation membrane protein YabQ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444571  Cd Length: 187  Bit Score: 123.59  E-value: 1.56e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545117044   1 MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGV 80
Cdd:COG5869    1 MTLTTQFYTFLAMVLGGILLGALFDTYRVFRGRFKLKRWLTFIEDLLFWLIQTLLVFYVLLLVNWGELRFYVFLGLLLGF 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 545117044  81 ATYQSLCKRIYIKILKFFIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVL 157
Cdd:COG5869   81 ALYFLLLSKLVIRLLERIIRLVRRLYRKVLRLLYKLIIYPFRFLFRLLKKPLRFIKRILLKILRFLLRILFKPIRWI 157
Spore_YabQ pfam09578
Spore cortex protein YabQ (Spore_YabQ); This protein is predicted to span the membrane several ...
 12-86 2.34e-13

Spore cortex protein YabQ (Spore_YabQ); This protein is predicted to span the membrane several times. It is only found in genomes of species that perform sporulation, such as Bacillus subtilis, Clostridium tetani, and other members of the Firmicutes (low-GC Gram-positive bacteria). Mutation of this sigmaE-dependent gene blocks development of the spore cortex. The length of the C-terminal region, which includes some hydrophobic regions, is variable.


Pssm-ID: 462829  Cd Length: 75  Bit Score: 62.51  E-value: 2.34e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 545117044   12 AMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSL 86
Cdd:pfam09578   1 ASVLTGIILGLLYDLYRILRRLFRHKKILVFIEDILFWLLAALIVFYFLLLTNDGELRFYVFLGILLGALLYYLL 75
 
Name Accession Description Interval E-value
spore_yabQ TIGR02893
spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several ...
 2-131 8.06e-38

spore cortex biosynthesis protein YabQ; YabQ, a protein predicted to span the membrane several times, is found in exactly those genomes whose species perform sporulation in the style of Bacillus subtilis, Clostridium tetani, and others of the Firmicutes. Mutation of this sigma(E)-dependent gene blocks development of the spore cortex. The length of the C-terminal region, including some hydrophobic regions, is rather variable between members. [Cellular processes, Sporulation and germination]


Pssm-ID: 131939  Cd Length: 130  Bit Score: 127.78  E-value: 8.06e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545117044    2 TLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGVA 81
Cdd:TIGR02893   1 SITIQFYTMISMVLSGIILGALFDTYRRFRKRQRLNKILVFIEDILFWIVQALIVFYFLLYVNEGEIRFYVFLALLCGLA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 545117044   82 TYQSLCKRIYIKILKFFIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWL 131
Cdd:TIGR02893  81 IYQALLSKYYVRILEKVITIVVKVLRFLFKLIKKLVVSPIIWILKLLIRL 130
YabQ COG5869
Spore cortex formation membrane protein YabQ [Cell cycle control, cell division, chromosome ...
 1-157 1.56e-35

Spore cortex formation membrane protein YabQ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444571  Cd Length: 187  Bit Score: 123.59  E-value: 1.56e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545117044   1 MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGV 80
Cdd:COG5869    1 MTLTTQFYTFLAMVLGGILLGALFDTYRVFRGRFKLKRWLTFIEDLLFWLIQTLLVFYVLLLVNWGELRFYVFLGLLLGF 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 545117044  81 ATYQSLCKRIYIKILKFFIYLVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCLYKIVMVL 157
Cdd:COG5869   81 ALYFLLLSKLVIRLLERIIRLVRRLYRKVLRLLYKLIIYPFRFLFRLLKKPLRFIKRILLKILRFLLRILFKPIRWI 157
Spore_YabQ pfam09578
Spore cortex protein YabQ (Spore_YabQ); This protein is predicted to span the membrane several ...
 12-86 2.34e-13

Spore cortex protein YabQ (Spore_YabQ); This protein is predicted to span the membrane several times. It is only found in genomes of species that perform sporulation, such as Bacillus subtilis, Clostridium tetani, and other members of the Firmicutes (low-GC Gram-positive bacteria). Mutation of this sigmaE-dependent gene blocks development of the spore cortex. The length of the C-terminal region, which includes some hydrophobic regions, is variable.


Pssm-ID: 462829  Cd Length: 75  Bit Score: 62.51  E-value: 2.34e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 545117044   12 AMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIVQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSL 86
Cdd:pfam09578   1 ASVLTGIILGLLYDLYRILRRLFRHKKILVFIEDILFWLLAALIVFYFLLLTNDGELRFYVFLGILLGALLYYLL 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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