|
Name |
Accession |
Description |
Interval |
E-value |
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
17-510 |
0e+00 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 900.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 17 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQNDIPWLYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNF 96
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 97 NEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRS 176
Cdd:CHL00049 81 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 177 NEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDV 256
Cdd:CHL00049 161 NEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 257 YEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 336
Cdd:CHL00049 241 YEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 337 IGIIVGDLNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFG 416
Cdd:CHL00049 321 IGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 417 KLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 496
Cdd:CHL00049 401 KLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 480
|
490
....*....|....
gi 543383049 497 AMNPIIAIAQDTLF 510
Cdd:CHL00049 481 SMNPIIAIAQDTLF 494
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
59-509 |
1.76e-158 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 460.29 E-value: 1.76e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 59 WLYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATL 138
Cdd:PRK02504 42 WLPYLAIAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 139 GGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL 218
Cdd:PRK02504 122 GGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALAL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 219 INTQmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLL 298
Cdd:PRK02504 202 ITSP---SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFDEQWKLL 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 299 LEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgDLNDGYASMITYMLFYISMNLGTFACIVLFGLRTGT 378
Cdd:PRK02504 279 FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVA-GTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGT 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 379 DNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGR 458
Cdd:PRK02504 358 DQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVIKMMVVKE 437
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 543383049 459 NQEITPYVRNYrrSPLRSN----NSIELSMIVCVIASTIPGIAMNPIIAIAQDTL 509
Cdd:PRK02504 438 PQEMSDVVKNY--PEINWNlpgmRPLRVGLVLCVIATALAGILSNPLFTLANTSV 490
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
59-506 |
1.08e-113 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 344.41 E-value: 1.08e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 59 WLYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATL 138
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 139 GGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGL 218
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG-SLNLAGIAAAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 219 iNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLL 298
Cdd:COG1007 193 -AAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 299 LEILAILSMILGNLIAITQTSMKRMLAYSS-----------IGQIgyviigiivgdlNDGYASMITYMLFYISMNLGTFA 367
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSiahagylllglAAGT------------PLGVSAALFYLLAYLFMNLGAFA 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 368 CIVLFGLR-TGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYY 446
Cdd:COG1007 340 VILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYY 419
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 447 YLKIIKLLMTGRNQEitpyvrnyrRSPLRSNNSIELSMIVCVIASTIPGIAMNPIIAIAQ 506
Cdd:COG1007 420 YLRVVKAMYFDEPEE---------EAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
66-506 |
3.64e-94 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 294.04 E-value: 3.64e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 66 TSFVMSITALLFR-WREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVEctEMAITEFLLFVLTATLGGMFLC 144
Cdd:PRK05777 43 LALLLALVALLFVlGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE--DRGRGEFYLLVLFALLGMMVMV 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 145 GANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNGLINTQMy 224
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS-LSFAGIAKALADGSG- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 225 NSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAI 304
Cdd:PRK05777 199 NSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDlNDGYASMITYMLFYISMNLGTFACIVLFGLRTG-TDNIRD 383
Cdd:PRK05777 279 ASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGT-AEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGeAESISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMtgRNQEIT 463
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMY--FDEPPR 435
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 543383049 464 PYVRNYRRSPLRsnnsieLSMIVCVIASTIPGIAMNPIIAIAQ 506
Cdd:PRK05777 436 DAPVNWPLSAGG------AVLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
51-454 |
6.83e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 230.61 E-value: 6.83e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 51 TSDQNDIPWLYFISSTSFVMSITALLFRWREEPMISFSG--NFQTNNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITE 128
Cdd:TIGR01770 24 YSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGfsFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgE 208
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG-S 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIVNGLiNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPF 288
Cdd:TIGR01770 183 LNFEDLLLFL-SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDLnDGYASMITYMLFYISMNLGTFAC 368
Cdd:TIGR01770 262 FGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTL-EGIKAVLFYIFIYALMSLGAFGV 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 369 IVL--FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYY 446
Cdd:TIGR01770 341 LSLlrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFY 420
|
....*...
gi 543383049 447 YLKIIKLL 454
Cdd:TIGR01770 421 YLRVVKVM 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
146-428 |
5.84e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.17 E-value: 5.84e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLinTQMYN 225
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTG-TLSFDELSKAL--TGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHLLLEILAI 304
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSL--LYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDlNDGYASMITYMLFYISMNLGTFACIVLFGL-RTGTDNIRD 383
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGT-IYGIQAAIFHLLTHGLFSAGLFLCAGSVIYrRVHTRNIRD 234
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 543383049 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAG 428
Cdd:pfam00361 235 YGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAAS 279
|
|
| Ndh2_N |
pfam19530 |
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of ... |
18-117 |
2.53e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I.
Pssm-ID: 437362 [Multi-domain] Cd Length: 100 Bit Score: 138.06 E-value: 2.53e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 18 FMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQNDIPWLYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNFN 97
Cdd:pfam19530 1 FMKAFHLSLFYGSTIFPECILIFGLISILMIDSTSKQKDIPWLYFISSTSLLLSIFILIFRLKEEPVISFLGNFQADNFN 80
|
90 100
....*....|....*....|
gi 543383049 98 EIFQFLILLCSTLCIPLSVE 117
Cdd:pfam19530 81 KIFRIFIALCSTLCIPLSVE 100
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
138-454 |
5.19e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 131.69 E-value: 5.19e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 138 LGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNG 217
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGG-LHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 218 LINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasalatrIFDIPFYFSSNEWHL 297
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 298 LleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDLNDGYASMItYMLFYISMNLGTFACIVLFGlrTG 377
Cdd:MTH00196 156 L--IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLV-YLFIYIIMSICVFSIILALN--VY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 543383049 378 TDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-451 |
4.35e-32 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 127.57 E-value: 4.35e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 58 PWLYFISST-SFVMSITALLFRWREEPMISFSGNFQT--------NNFNEIFQFLILLCSTLCIPLSVEYVEcTEMAITE 128
Cdd:COG0651 30 RALSLLASLaLLALALALLLQVLAGGPLVYALGGWPApfgivlvaDRLSALFLLLTALVALAVLLYSIGYMR-HERRGRR 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 F--LLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYtKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:COG0651 109 FypLFLLLLAGMNGAFL--TGDLFNLFVFFEVMLLASYGLVAL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 207 GeielQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFD 285
Cdd:COG0651 186 T----LNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRVLTL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 286 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdlndgyaSMITYMLFYISMN--L 363
Cdd:COG0651 262 LFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV--------------------SQIGYILLGLGLGtpL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 364 GTFACIV-----------LF------GLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQ 426
Cdd:COG0651 322 GLAGALFhllnhalakalLFlaagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALE 401
|
410 420
....*....|....*....|....*
gi 543383049 427 AGLYLLVLIGLLTSVLSIYYYLKII 451
Cdd:COG0651 402 AGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
103-454 |
2.12e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.43 E-value: 2.12e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 103 LILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMK 182
Cdd:MTH00199 73 IIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 183 YLLMGGASSSILVHGFSWLYGSSGgEIELQEIvnglintqmyNSPGI-SIALIFITVGIGFKLSPAPSHQWTPDVYEGSP 261
Cdd:MTH00199 153 YFVLGAVSSGLFLFGCALLYGLTG-ETSIQGI----------NSILTgDVGKILITISLLFKLSAAPFHMWAPDVYEGAP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 262 TPVVAFLSVTSKVAASALATRIfdipfYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 341
Cdd:MTH00199 222 TITTALLATVPKIGVFSILVQI-----GPVTN----VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAI 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 342 GDLNDGYASMItYMLFYISMNLGTFAciVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLF 421
Cdd:MTH00199 293 GSFESIQASLI-YMIIYVIMSICSFS--IILSLKLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
330 340 350
....*....|....*....|....*....|...
gi 543383049 422 WCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00199 370 LSGVSSGYYLICIIAVLSSVIAGVYYVRVVQII 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-510 |
8.88e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 116.13 E-value: 8.88e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 102 FLILLCSTLCIPLSVEYVECTEMAITEF--LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEA 179
Cdd:PRK08375 81 LFLLVTSILAIAALLYAIGYGEHRQTRFyaLFLLLLAGLLGALLTA--DLFNLFVFLEIMSLSSYALVAMGG-DRRALAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 180 TMKYLLMGGASSSILVHGFSWLYGSSG--GEIELQEIVNGlintqmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVY 257
Cdd:PRK08375 158 ARKYLIVGLIGSTFLLIGVGLLYGVTGtlNMADLAGALAE--------NPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 258 EGSPTPVVAFLSVT-SKVAASALAtRI----FDIPFYFSSNeWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 332
Cdd:PRK08375 230 PAAPPVVTALLSGLvTKVAVYALI-RIyftvFGGDFRFALG-LGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 333 GYVIIGIIVGDLNDGYASMItYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLA 412
Cdd:PRK08375 308 GYILLGLALLTPLALAAGLL-HLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 413 GFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGrnqEITPYVRNYRRSPlrsNNSIELSMIVCVIAST 492
Cdd:PRK08375 387 GFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG---PPPPGSEAPKQEA---PLGMLAPSLALALLSL 460
|
410
....*....|....*...
gi 543383049 493 IPGIAMNPIIAIAQDTLF 510
Cdd:PRK08375 461 LLGIYAGPLLQLADAAAA 478
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
82-506 |
2.57e-23 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 102.92 E-value: 2.57e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 82 EPMISFSGNFQ--------TNNFNEIFQFLILLCSTLCIPLSVEYV--ECTEMAITEFLLFVLTATlgGMFLCGanDLIT 151
Cdd:PRK08377 57 KPIIIMAGGWKppvginlyIGPFAALFVLIIAIVSFIMSIFSLKAVevEPIDKYAMLFLLLMLGAT--GMIATG--DIFN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 152 IFVAPECFSLCSYLLSGYTKkDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQeiVNGLINTQMYNSPGISI 231
Cdd:PRK08377 133 LFVFMEITAITAYALTAYNK-TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH--IAQLAGTIDPTVAQVGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 232 ALIFItvGIGFKLSPAPSHQWTPDVYEGSPTPV-VAFLSVTSKVAASALATRIFdipFYFSSNEWHLLLE---ILAILSM 307
Cdd:PRK08377 210 ALLIF--GLAVEAELFPLNAWAPDAYQAAPHPItVMFSAFVVKAGLYAMARILY---LMQNANGWSSVLKlviIMATLTV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 308 ILGNLIAITQTSMKRMLAYSSIG---QIGYVIIGIIVGDLNDGYASMITYMLFYISMnlgtFACIVLFGLRTGTDNIRDY 384
Cdd:PRK08377 285 FFAELSALRQKNVKRMIAYSSIGqvgMIALALALGTQAGVDAGVFHMINHAIVKALL----FLAVGYVGITLGGTEIEKF 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 385 AGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEItp 464
Cdd:PRK08377 361 EGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGER-- 438
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 543383049 465 yvrnyrrspLRSNNSIELSMIVCVIASTIPGIAMNPIIAIAQ 506
Cdd:PRK08377 439 ---------IRENAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
130-383 |
3.53e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 103.01 E-value: 3.53e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 130 LLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN--------EATMKYLLMGGASSSILVHGFSWL 201
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppESGLKYWILGAMSSGFYLFGCALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 202 YGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALAT 281
Cdd:MTH00198 271 FGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLT 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 282 RIFDIPfyfssnewHLLLEIlAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDLnDGYASMITYMLFYISM 361
Cdd:MTH00198 351 SLVITS--------KLLLSV-AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTY-ESLQASWTYAVTYLVS 420
|
250 260
....*....|....*....|....*
gi 543383049 362 NLGTFACIVL---FGLRTGTDNIRD 383
Cdd:MTH00198 421 ALASFTVICTleeFGTRTPTSRQRD 445
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-501 |
1.24e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 100.82 E-value: 1.24e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 96 FNEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFV-LTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDV 174
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLgLEAGMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 175 RSNEATMKYLLMGGASSSILVHGFSWLYGSSG--GEIELQEIVNGLINTQMYNSPG-----ISIALIFITVGIGFKLSPA 247
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlNMADLSAKIRGLSFPLTGGLAGnpplaLGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 248 PSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALAtRIFDIPFYFSSNE---WHLLLEILAIL---SMILGNLIAITQTSM 320
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSgLVVNVGAYAII-RFLYTIFGISPSLidfRAALSPILIILgavSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 321 KRMLAYSSIgqigyviigiivgdLNDGYASM---------ITYMLFYISMNlgTFACIVLF---GL---RTGTDNIRDYA 385
Cdd:PRK12667 320 KRLLAYSTI--------------SHMGYIFMgigigtqlgLAAALFHIINH--AIAKSLLFlasGVfihAAGTRDIDELA 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 386 GLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEItpy 465
Cdd:PRK12667 384 GLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG--- 460
|
410 420 430
....*....|....*....|....*....|....*.
gi 543383049 466 vrnyRRSPLRSNNSIELSMIVCVIASTIPGIAMNPI 501
Cdd:PRK12667 461 ----EEVEHKESPSMSVVILVLALAVLILGILALFL 492
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-329 |
1.05e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 95.16 E-value: 1.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYV-ECTEMAITEFLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGY 169
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMkHDTGLDKYYTLILLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 170 TKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeielqEIVNGLINTQMYNSPGI--SIALIFITVGIGFKLSPA 247
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG------TLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 248 PSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDI-PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAY 326
Cdd:PRK08376 238 PVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIyGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
...
gi 543383049 327 SSI 329
Cdd:PRK08376 318 HSV 320
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
87-393 |
5.96e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 77.34 E-value: 5.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 87 FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLL 166
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 167 SGYTKKDVRsnEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLINTqmyNSPGISIALIFITVGIGF-KLS 245
Cdd:PRK08668 138 VPMGKKESR--KASLKYFVLSAIGAYAMLYAIFLIY-AKTGTFDFADISQGLIND---TSTGFALIVFLFLLAFGVaKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 246 PAPSHQWTPDVYEGSPTPVVAFLS-VTSK--------VAASALATRIF-DIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:PRK08668 212 IFPLHVWAPDAYSEAPQSFSAVLSgQLSKlgaygfllVLYVLPGTKLFsEFGTYRGVPLFNYILAWLGNISIIVGTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 316 TQTSMKRMLAYSSIGQIGYVIIGIIVGD---LNDGYASMITYMLFYISMNLGTFACIvlfgLRTGTDNIRDYAGLYTKDP 392
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVI----YRTGTTKISEMGGLIEKMP 367
|
.
gi 543383049 393 F 393
Cdd:PRK08668 368 F 368
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-328 |
4.27e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.22 E-value: 4.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 208
Cdd:PRK07234 98 AQLLILHGSVNAAFVCA--DLISLYVALEVLSIATFLLVAYPRTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT- 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 ielqeivngLINTQMYNSPGISIALIFitVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIP 287
Cdd:PRK07234 174 ---------FAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVRCALDVP 242
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 543383049 288 fyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07234 243 ------GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
129-328 |
3.36e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.51 E-value: 3.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSnEATMKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:TIGR01972 110 ALLLLLEAGVIGVFL--ALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI-YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEivngLINTQMYNSPGiSIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATriFDIP 287
Cdd:TIGR01972 187 FDLLE----LLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLR--FNLP 259
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 543383049 288 -FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:TIGR01972 260 lFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
129-326 |
3.39e-13 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 71.60 E-value: 3.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCS---YLLSGYTkkdvRSNEATMKYLLMGGASSSILVHGFSWLYGSS 205
Cdd:PRK06277 104 FLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvglVIASGTE----EAYKAALKYMILGNVAGSILLLGIGFLLAST 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 206 GgEIELQEIVNGLINTqmYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALAT---R 282
Cdd:PRK06277 178 G-TLNITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifK 254
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 543383049 283 IFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAY 326
Cdd:PRK06277 255 LFGGLSYFPSAQGVLIA--LSVLAMVFGVVMALLQTDYKRLLAY 296
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
130-507 |
4.27e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.52 E-value: 4.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 130 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG- 206
Cdd:PRK12663 113 FILLLMAGVIGSFLTG--DLFNLYVWFEVMLIASFVLItlGQEREQLR---GAIKYVVLNLIGSWLFLLGIGLLYGTFGt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 207 ---GEIELQeivnglINTQMYNSPGISIALIFITVgIGFKLSPAPSHqWTPDVYEGSPTPVVA-FLSVTSKVAASALaTR 282
Cdd:PRK12663 188 lnmAHIAMR------LNDMGDTATLTTIALLFLLA-FGMKAALFPFM-WLPAAYHTPNTEVAAlFAALLTKVGIYAL-IR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 283 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAY---SSIGQIGYVIIGIIVgdlnDGYASMITYMLFYI 359
Cdd:PRK12663 259 VFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYqviSSIGFILLGLALGTP----AGINGAIFYLVHDM 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 360 SMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLT 439
Cdd:PRK12663 335 VVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLIT 414
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 543383049 440 SVLSIYYYLKIIkLLMTGRNQEITpyVRNYRRSPLRSnnsiELSMIVCVIASTIPGIAMNPIIAIAQD 507
Cdd:PRK12663 415 SLITMYSLFRIF-FLAYWGDKDGE--EVNFKPIPLYR----KLPLSILAVVVIAMGIAAEPLLNLTQD 475
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-506 |
8.90e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 70.53 E-value: 8.90e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 146 ANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeiELQEIVNGLINTQMYN 225
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVA-MGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITG---TLNMGDMFLIIQDLPT 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI----FDIPFYFSSNEWHLLLEI 301
Cdd:PRK12662 205 NRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvFKANFVFTTLPFNNVFMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 302 LAILSMILGNLIAITQTSMKRMLAYSSIgQIGYVIIGIIVGDLNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNI 381
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSI-SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 382 RDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKII-KLLMTGRNQ 460
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVeALYFESRMV 443
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 543383049 461 EitpyvRNYRRSPLRSNNSIELSMIVCVIASTIPGIAMNPIIAIAQ 506
Cdd:PRK12662 444 E-----SKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTLISE 484
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-450 |
1.78e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.59 E-value: 1.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:PRK07691 112 PSVLFMLAGVNGAFLTG--DIFNLFVFFEVMLMASYVLIviGGTKIQLR---ESIKYVLINVVSSAFFVVAVAILYSVVG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 207 gEIELQEIVNGLINTQMYNSPGIS-IALIFITVgIGFKLSPAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASALAtRIF 284
Cdd:PRK07691 187 -TLNMADISVKIAELSAGQTGLITvVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIA-RTF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 285 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgiivgdlndGYASM----ITYMLFYIS 360
Cdd:PRK07691 264 TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV---------GVAMMtesgMIGAIYYLI 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 361 MNLGTFACIVLFG----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIG 436
Cdd:PRK07691 335 HDMIVKAALFLLIgimiKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIV 414
|
330
....*....|....
gi 543383049 437 LLTSVLSIYYYLKI 450
Cdd:PRK07691 415 LLSSLLVLYSVIKI 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
128-329 |
2.38e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 69.47 E-value: 2.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 128 EFLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFsWLYGSSGG 207
Cdd:PRK12649 115 QYLLLFMGSMIGMVF---SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGF-LLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 208 EIELQEIVNG--LINTqMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIF 284
Cdd:PRK12649 191 TYDIATILQDseLIEN-IKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLhSATMVKAGVYLVARIH 268
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 543383049 285 diPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12649 269 --PIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
146-327 |
2.77e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 69.03 E-value: 2.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLinTQMYN 225
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG-AIAGTLNFSELLAAA--PTILS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 226 SPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIFdiPFYFSSNEWHLLLEILAI 304
Cdd:COG1009 207 SPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG-PTPVSALLHAATMVKAGVyLLARLS--PLFALSPVWLTVVAIIGA 283
|
170 180
....*....|....*....|...
gi 543383049 305 LSMILGNLIAITQTSMKRMLAYS 327
Cdd:COG1009 284 ITALFAALIALAQTDIKRVLAYS 306
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
129-327 |
5.08e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.41 E-value: 5.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGgmfLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgE 208
Cdd:PRK12647 100 YILLFMASMLG---LVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG-T 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIVNGliNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIFdiP 287
Cdd:PRK12647 176 YSLSELLAS--GDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLhSATMVKAGIYLLARLN--P 250
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 543383049 288 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 327
Cdd:PRK12647 251 VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
129-328 |
7.95e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.41 E-value: 7.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLS---GYTKKdvrsNEATMKYLLMGGASSSILVHGFSWLYGSS 205
Cdd:COG1008 115 ALLLLLEAGMIGVFL--ALDLFLFYVFWELMLIPMYFLIgiwGGERR----IYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 206 GGEI-ELQEIVNGLI--NTQMynspgisiaLIFITVGIGF--KLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAL 279
Cdd:COG1008 189 GALTfDIAELAAAPLplTAQL---------LLFLAFFIAFavKVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGYGL 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 543383049 280 AtRiFDIP-FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:COG1008 260 L-R-FALPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-428 |
6.44e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.60 E-value: 6.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 133 VLTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSGG--- 207
Cdd:PRK12665 119 ILVAGVSNAFLAG--DLFNLYVGFEILLVASYVLltLGATAARVR---AGVTYVMVSMVSSLLFLIGIALVYAATGTlnm 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 208 ---EIELQEIvnglintqmynSPGISIAL-IFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVA-FLSVTSKVAASALatr 282
Cdd:PRK12665 194 adlAVRLDEL-----------PSGTRTALfAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAvFAGLLTKVGVYAI--- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 283 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSsigqigyviigiivgdlndgYASMITYMLFYISMN 362
Cdd:PRK12665 260 IRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT--------------------LVSHIGYMVFGIALS 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 363 --LGTFACIV-----------LF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWC 423
Cdd:PRK12665 320 tvAGLSGAIYyvahhitvqttLFlvvGLierQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
....*
gi 543383049 424 GWQAG 428
Cdd:PRK12665 400 GAEDG 404
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
133-417 |
9.10e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 64.56 E-value: 9.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 133 VLTATLGGMF-LCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASssILVhGFSWLyGSSGGE 208
Cdd:PRK12644 111 ELVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvttAGGLA--MLV-GIIIL-GQAAGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIVNglintQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-LATRIfdIP 287
Cdd:PRK12644 187 YRLSELLA-----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIyLVARL--AP 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 288 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDLNDGYASMItyMLFYISMNLGTFA 367
Cdd:PRK12644 259 GFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA--MLLAHALFKAALF 336
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 543383049 368 CIVlfGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK 417
Cdd:PRK12644 337 LVV--GIidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
175-450 |
5.59e-10 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 60.71 E-value: 5.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 175 RSNEATMKYLLMGGASSSILVHGF---SWLYGSsggeielqeivnglintQMYNSPGISIALIFITVGIGFKLSPAPSHQ 251
Cdd:MTH00041 51 RSVEATIKYFLVQAFSAAILLNGAliqAWLSGS-----------------WSINGPLNTLSSIIITLALALKLGLAPCHF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 252 WTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 331
Cdd:MTH00041 114 WFPDVLQGLPFLQGLIIATWQKIAP-------LILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 332 IGYVIIGIIvgdlNDGYASmITYMLFYISMNLGTFacivLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPL 411
Cdd:MTH00041 187 LGWIIITSA----YSPNAS-IIMFLIYIIINTSIF----LIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270
....*....|....*....|....*....|....*....
gi 543383049 412 AGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKI 450
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRI 296
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-328 |
6.79e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 61.27 E-value: 6.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 179 ATMKYLLMGGASSSILVHGF---SWLYGSSGGEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSPAPSHQWTPD 255
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFlgiVWLSGSTSFDYDAISTQNLSLNTQL-------ILLTGLLLGFGIKIPLVPLHTWLPD 230
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 543383049 256 VY-EGSPTPVVAFLSVTSKVAASALATriFDIPFYfsSNEWHLLLEILAI---LSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07363 231 AYtEASPAVAILLGGVLAKLGTYGLLR--FGLQLF--PQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSS 303
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
9.97e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 60.87 E-value: 9.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 130 LLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGgASSSILV----HGFSWLYGSS 205
Cdd:PRK06473 112 LLLLLNAGVSGAFL--AQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYT-AISGILIlvsfLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 206 GGEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATriF 284
Cdd:PRK06473 188 SFDYEPLRSHTLPLSTQL-------LLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAgVLLKLGTYGLLR--F 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 543383049 285 DIPFYFSSneWHLL---LEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06473 259 GVGLFPEA--WVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
60-328 |
1.04e-09 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 61.09 E-value: 1.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 60 LYFISSTSFVMS--ITALLFRWreepMISFSGNFQT--NNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITEF---LLF 132
Cdd:PRK12645 43 IYFLSLIPTTMSgnTVMKTLPW----IPSLGINFTLyvDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFyvyLLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 133 VLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASssiLVHGFSWLYGSsGGEI 209
Cdd:PRK12645 119 FMGAMLGVVL---SDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLitvFGGLS---MLGGFILLYIM-TGSF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 210 ELQEIVNGLINTQmyNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIfdIPF 288
Cdd:PRK12645 192 SIREMIANADEIQ--NSPLFIPAMILILLGAFTKSAQFPFYIWLPDAME-APTPVSAYLhSATMVKAGIYLVARF--TPI 266
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 543383049 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12645 267 FAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
179-328 |
2.02e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.75 E-value: 2.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 179 ATMKYLLMGGASSSILVHGFSWLY---GSSGGEIELQEIVNGLINTQMYNspgisiaLIFITVGIGF--KLSPAPSHQWT 253
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVvvyYNATGTFDIADLLNLPLPPGVQY-------WLFLAFFIAFavKMPMFPLHTWL 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 543383049 254 PDVYEGSPTPVVAFLS-VTSKVAASALATriFDIPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAgILLKMGAYGLLR--FSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
126-328 |
2.39e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 56.51 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 126 ITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGS- 204
Cdd:MTH00032 110 VPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTi 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 205 --------SGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGF--KLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKV 274
Cdd:MTH00032 190 gsldfltfNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCigKSAQLGLHTWLPDAMEG-PTPVSALIHAATMV 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 543383049 275 AASALATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00032 269 TAGVFLM-IRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYST 321
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
57-405 |
4.46e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.32 E-value: 4.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 57 IPWLYFISST-SFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLI----LLCSTLCIPLSVEYVECTEMAITEFLL 131
Cdd:PRK06458 30 VATLNVLGITlTLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIgvvgFLTSLYSIGYMRHEVEHGELSPVTLRL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 132 F--VLTATLGGMFLC-GANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgsSGGE 208
Cdd:PRK06458 110 YygMYQLFLFTMLLAlTSNNLGLMWVAIEATTLSSALLVG-IYRTRASLEAAWKYIIICSVGVAFALFGTILVY--ANAA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIVNGLINTQMYNSPG------ISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALaT 281
Cdd:PRK06458 187 TVMGDGEMAILWTELLKHASlldptlMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSgVLLNVALYAV-L 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 282 RIFDIPFYFSSNEW--HLLLeILAILSMILGNLIAITQTSMKRMLAYSSigqigyviigiivgdlndgyasmITYM---L 356
Cdd:PRK06458 266 RYYILIDAAIGSDFpgRLLL-IFGLLSVLVAAFFLLRQRDIKRLFAYSS-----------------------IEHMgliA 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 543383049 357 FYISMN--LGTFACIVL------------FG-----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSL 405
Cdd:PRK06458 322 FALGIGgpLGIFAALLHmlnhsltksaifFAsgnvlQKYGTRDINVIRGLLKVSPLTGWGLMLGALAI 389
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
223-478 |
6.27e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 54.51 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 223 MYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatrIFDIPFYFSSNEWHLLLEIL 302
Cdd:MTH00144 77 MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP------LFLLSNFLDLYWLAYLLCVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgdlndGYASMITYMLFYISMNLGTFacivlFGLRTGTDNIR 382
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH-----GSWLMWMYFLIYIVSSGFLF-----FSLWSGDSGSM 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 383 DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEI 462
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSK 300
|
250
....*....|....*.
gi 543383049 463 TPYVRNYRRSPLRSNN 478
Cdd:MTH00144 301 KSNSSKVLNSSIISLN 316
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
148-329 |
6.76e-08 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 55.03 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 148 DLITIFVAPECFSLCSYLLSG--YTKKDvrSNEATMKY----------LLMGgasssILvhGFSWLYGSsggeIELQEIV 215
Cdd:PRK07376 143 NLVQIYVFWELVGMCSYLLVGfwYDRKG--AADAAQKAfvvnrvgdfgLLLG-----IL--GLFWATGS----FDFDGIA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 216 NGLinTQMYNSPGISIAL-----IFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIFdiPFY 289
Cdd:PRK07376 210 DRL--SELVSSGAVSGWLalllcILVFLGPMAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVfLVARMY--PVF 284
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 543383049 290 fssNEWHLLLEILAILSMI---LGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK07376 285 ---EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
76-329 |
1.04e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 54.70 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 76 LFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00020 61 LWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMR-GDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 156 PECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLIntqMYNSPGISIALIF 235
Cdd:MTH00020 140 WEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVV---SAPSSDITLICLF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 236 ITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASALATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:MTH00020 216 LFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLL-IRSSPLFEQAPLALIIVTIVGSLTVFFAATVGL 293
|
250
....*....|....
gi 543383049 316 TQTSMKRMLAYSSI 329
Cdd:MTH00020 294 VQNDLKKVIAYSTC 307
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
60-387 |
1.08e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 54.76 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 60 LYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVECTEMAITEFLLFVLTATLG 139
Cdd:PRK12646 43 IYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFS 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 140 GMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEiELQEIVNGli 219
Cdd:PRK12646 123 MIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN-NITEILGQ-- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 220 NTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASALATRIFdIPFYFSSNEWHLLL 299
Cdd:PRK12646 200 ADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLFRF-TPLLGLSNMYIYIV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 300 EILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI-----IVGDLNDGYASMITYMLF---YISMNLGTFACIVL 371
Cdd:PRK12646 278 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLFaalFHLMNHAIFKCALF 357
|
330 340
....*....|....*....|.
gi 543383049 372 FGL-----RTGTDNIRDYAGL 387
Cdd:PRK12646 358 MGVgiidhEAGTRDIRILSGM 378
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
146-328 |
1.48e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.12 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGG-------EIELqeivngl 218
Cdd:PRK06521 132 ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSydfaamrAAHL------- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 219 intqmynSPGI-SIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIpFYFSSNEWH 296
Cdd:PRK06521 205 -------SPFWaSLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSgVMLKVAIYGILRVVFDL-LGAPGWWWG 276
|
170 180 190
....*....|....*....|....*....|..
gi 543383049 297 LLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
102-421 |
1.82e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 53.97 E-value: 1.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 102 FLILLCS-TLCIPL-SVEYVECTEMAITEFLLFVLTA--TLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN 177
Cdd:PRK08667 82 FIILIGLvSLCVAIySLGYNEHMSSNERANLLSALTAlfILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 178 EATMKYLLMGGASSSILVHGFSWLYGSSGG-EIELQEivnglintqmYNSPGISIALIFITVGIGFKLSPAPSHQWTPDV 256
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfELSPLG----------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 257 YEGSPTPVVAFLS-VTSKVAASALATriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYV 335
Cdd:PRK08667 232 HPASPSNVSALMSgVMLKVAVYGLVR--FLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 336 IIGIIVGDLNDGYASMITYML-----FYISMNLGTFACIVLFG-----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSL 405
Cdd:PRK08667 310 LMGIGLYVIFGVYGLDTLALLalggaLFHSLNHALFKSLLFLTagsvvHATGTRNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
330
....*....|....*.
gi 543383049 406 GGLPPLAGFFGKLYLF 421
Cdd:PRK08667 390 AALPPFNGFASELLLY 405
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
129-328 |
4.36e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.89 E-value: 4.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKdVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 208
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 ielqeivngLINTQMYNSPGISIalifITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRifdipF 288
Cdd:MTH00200 84 ---------WGISEMLGPLSETL----ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ-----L 145
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 543383049 289 YFSSNEWhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00200 146 APALNSN--ILLLLGLLSVLVGGWGGLNQTQLRKILAYSS 183
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
127-328 |
6.59e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.35 E-value: 6.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 127 TEFLLFVLTATLggmflcgANDLITIFVAPECFSLCSYLLSGYTKKDVRsnEATMKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:PRK12650 117 TAFMAAMLLLVL-------ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 207 gEIELQEIvngLINTQMYNSPGISIALIFITVGIGF-KLSPAPSHQWTPDVYeGSPTPVVAFLSVTSKVAASA-LATRIF 284
Cdd:PRK12650 188 -TTSLSGI---LHSDVWAEKPGLTTVVAVLIAVAAFtKSAQFPFHFWLPEAM-AAITPVSAFLHAAAVVKAGIyLLLRFS 262
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 543383049 285 DIpfyFSSNE-WHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12650 263 PV---FHDVAvWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-328 |
1.18e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 51.19 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:PRK12561 91 FLMLVLYSAQIGVFL--AQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIVNglintqmyNSPGISIALIFIT---VGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAL----A 280
Cdd:PRK12561 169 FDLAELGA--------KSYPLALELLLYAgflIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYALirfnV 240
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 543383049 281 TRIFDIPFYFSSnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12561 241 QMLPDAHVYFAP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
1.37e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 50.30 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 175 RSNEATMKYLLMGGASSSILVhgFS-----WLYGssggEIELqeivnglINTQMynspgiSIALIFITVGIGFKLSPAPS 249
Cdd:MTH00070 51 RATEAATKYFLTQASASALIL--FSstinaWFTG----EWTI-------MNMQT------PLPTIMLTIALMMKLGIAPF 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 543383049 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatrIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00070 112 HFWLPEVLQGLDLTTGLILSTWQKLAPMAL---LIQISHLLNSN----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSS 183
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-329 |
1.55e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 50.66 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 136 ATLGGMFlcgANDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSGGeielqe 213
Cdd:PRK12668 105 SALGAVF---AGDLLTLFVFWELMAFTSTFLvwARGTKAAVR---AGFRYLLVHVLGGVLLLAGILLHYAETGS------ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 214 ivngLINTQMYNSPGISIALIFItvGIGFKLSPAPSHQWTPDVY-EGSPTPVVaFLSV-TSKVAASALAtRIFDipfyfs 291
Cdd:PRK12668 173 ----FAFGAIAGLGGTAAWLILI--GFGVNAAFPPLHAWLPDAYpEATVTGSV-FLSAfTTKTAVYALA-RAFP------ 238
|
170 180 190
....*....|....*....|....*....|....*...
gi 543383049 292 snEWHLLLEILAILSmILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12668 239 --GTELLIYIGAAMA-VYGVFFALLENDLRRLLSYHIV 273
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
129-327 |
4.28e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.12 E-value: 4.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 129 FLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGE 208
Cdd:PRK06525 118 FLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 209 IELQEIvNGLintqmyNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTS--KVAASALATRIFD- 285
Cdd:PRK06525 193 FALSAL-SGL------HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA-PTPASAYLHAASmvKVGVYIFARAIQSm 264
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 543383049 286 --IPfyfssNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 327
Cdd:PRK06525 265 gpIP-----HVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
130-328 |
5.26e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 45.20 E-value: 5.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 130 LLFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVhgFSwlygssggei 209
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLE-INLLSFIPLISNKKNLMSSESSLKYFLIQALASIILL--FS---------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 210 elqeivngLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasalatrifdiPFY 289
Cdd:MTH00160 75 --------IILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIA-----------PLI 135
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 543383049 290 -FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00160 136 lLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSS 175
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
130-329 |
5.43e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.16 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 130 LLFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSggei 209
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 210 elqeivnglintqmynSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFY 289
Cdd:MTH00011 84 ----------------SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAP-------LSILFF 140
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 543383049 290 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSI 180
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
149-329 |
1.19e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 44.88 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 149 LITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKY----------LLMGgasssILvhGFSWLYGSSggEIE-LQEIVNG 217
Cdd:CHL00025 144 LIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfvtnrvgdfgLLLG-----IL--GFYWITGSF--EFRdLFEIFNN 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 218 LINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIF----DIPFYFSS 292
Cdd:CHL00025 215 LIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIfLVARLLplfiVIPYIMNL 293
|
170 180 190
....*....|....*....|....*....|....*..
gi 543383049 293 NEWhllleiLAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:CHL00025 294 ISL------IGIITALLGATLALAQKDIKRGLAYSTM 324
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-328 |
2.17e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 43.65 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 87 FSGNFQTNNFNEIFQFLI---LLCSTLCIP--LSVEYVECTemaiTEFLLFVLTATLGGMFLCGANDLITIFVAPECFSL 161
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIgflWICALLYTPkyLAINNIDSS----SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 162 CSYLLSGYTKKDVrSNEATMKYLLMGGASSSIL-VHGFSWLYGSSGgeiELQEIVNGLINTqmynSPGISIALIFItVGI 240
Cdd:PRK06589 151 STAFLIGHTRNNI-SLSGGYKYLKILMISALLLfLPAVILIYTKTG---NLDFVSGGLFSK----NQSIILLLMFI-YGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 241 GfKLSPAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-----LATRIFDIPF---YFSSNEWhllLEILAILSMILGNL 312
Cdd:PRK06589 222 A-KTAIFPVHSWLPAAMV-AHYPVSALLHAVIVVKTGLfciykILLYIFGLSYlqrIFAEFNW---LIFIPIVSIFYSSL 296
|
250
....*....|....*.
gi 543383049 313 IAITQTSMKRMLAYSS 328
Cdd:PRK06589 297 KALKTDNIKKILAYST 312
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
175-418 |
2.61e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.27 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 175 RSNEATMKYLLMGGASSSILVhgFS-----WLYGSsgGEIelqeivnglinTQMYNSPgisiALIFITVGIGFKLSPAPS 249
Cdd:MTH00112 51 RATEAATKYFLTQAAASALIL--FSsttnaWNTGQ--WDI-----------TQLTNPT----SCTLLTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatrifdipFYFSSNEWHL-LLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00112 112 HFWLPEVLQGSTTTTALILSTWQKLAPLTL--------LLMTSNSLNPtLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 329 IGQIGYVIIGIIvgdlndgYA---SMITYMLfYISMNLGTFACIVLfglrTGTDNIRDYAGLYTKDPFLALSLALCLLSL 405
Cdd:MTH00112 184 IAHLGWMIAIIT-------YSpklTLLTFYI-YILMTTPMFLTLNT----TSTKTLKDMMTSWTKSPTLNTTLMLTLLSL 251
|
250
....*....|...
gi 543383049 406 GGLPPLAGFFGKL 418
Cdd:MTH00112 252 AGLPPLTGFMPKW 264
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
76-329 |
9.08e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 9.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 76 LFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYVEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00210 61 LWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMS-GDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 156 PECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELqEIVNGLINTQMyNSPGISIALIF 235
Cdd:MTH00210 140 WEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGT-LEF-STISSLLVTNI-NKESLTIICLL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543383049 236 ITVGIGFKLSPAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASALATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:MTH00210 217 LFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLI-IRSGPLFEGSPLALTIVTILGALTAFFAATVGV 294
|
250
....*....|....
gi 543383049 316 TQTSMKRMLAYSSI 329
Cdd:MTH00210 295 VQNDLKKVIAYSTC 308
|
|
| |
