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Conserved domains on  [gi|543249361|ref|XP_005417282|]
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annexin A7 [Geospiza fortis]

Protein Classification

annexin( domain architecture ID 10446041)

annexin belongs to a family of calcium- and phospholipid-binding proteins that have been implicated in many cellular processes, including channel formation, membrane fusion, vesicle transport, and regulation of phospholipase A2 activity

CATH:  1.10.220.10
Gene Ontology:  GO:0005509|GO:0005544|GO:0048306|GO:0003723
PubMed:  15059252|1646719
SCOP:  4001063
TCDB:  1.A.31

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 2.31e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.40  E-value: 2.31e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEEDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 3.91e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 103.32  E-value: 3.91e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKTLGTMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 51-160 9.33e-05

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.98  E-value: 9.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  51 PAATPNAGFPGAAGYPAPGGYPASGGFPGAPQAGGMPPYPGGPGFAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 543249361 131 QVPSPMPGPPAAVVQYTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
 
Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 2.31e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.40  E-value: 2.31e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEEDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 3.91e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 103.32  E-value: 3.91e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKTLGTMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
174-226 1.29e-23

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 93.24  E-value: 1.29e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   174 GTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
405-457 1.44e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 87.46  E-value: 1.44e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   405 GTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKTLGTMIASDTSGDYRKLLLAI 457
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
246-298 1.98e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 87.08  E-value: 1.98e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   246 GTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEEDIRSDTSGHFERLLISM 298
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
330-379 4.00e-12

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 60.88  E-value: 4.00e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 543249361   330 GTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGL 379
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLL 50
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 51-160 9.33e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.98  E-value: 9.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  51 PAATPNAGFPGAAGYPAPGGYPASGGFPGAPQAGGMPPYPGGPGFAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 543249361 131 QVPSPMPGPPAAVVQYTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
 
Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 2.31e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.40  E-value: 2.31e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEEDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 3.91e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 103.32  E-value: 3.91e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKTLGTMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
174-226 1.29e-23

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 93.24  E-value: 1.29e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   174 GTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
405-457 1.44e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 87.46  E-value: 1.44e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   405 GTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKTLGTMIASDTSGDYRKLLLAI 457
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
246-298 1.98e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 87.08  E-value: 1.98e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 543249361   246 GTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEEDIRSDTSGHFERLLISM 298
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 543249361  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
330-379 4.00e-12

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 60.88  E-value: 4.00e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 543249361   330 GTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGL 379
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLL 50
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 51-160 9.33e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.98  E-value: 9.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  51 PAATPNAGFPGAAGYPAPGGYPASGGFPGAPQAGGMPPYPGGPGFAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 543249361 131 QVPSPMPGPPAAVVQYTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 4-143 2.70e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 2.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   4 PGYPPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAATP-----NAGFPGAAGYPAPGGYPASGGFP 78
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPaapaaPAGAAPAQPAPAPAATPPAGQAD 715

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 543249361  79 GAPQAGGMPPYPGGPGFAV------PPTGPGFGGYPQQPPAQSYAGGGPAqiPGFPGGQVPSPMPGPPAAV 143
Cdd:PRK07764 716 DPAAQPPQAAQGASAPSPAaddpvpLPPEPDDPPDPAGAPAQPPPPPAPA--PAAAPAAAPPPSPPSEEEE 784
PHA03247 PHA03247
large tegument protein UL36; Provisional
 7-145 5.28e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 5.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361    7 PPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAATPNAGFPGAAGYPAPGGYPASggfPGAPQAGGM 86
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPA---PAPPAAPAA 2777

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 543249361   87 PPYPGGPGFAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFPGGQVPSPMPGPPAAVVQ 145
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP 2836
PHA03378 PHA03378
EBNA-3B; Provisional
 19-172 5.65e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 42.36  E-value: 5.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  19 PPTGQESVYPPAGqyAYPAVPGGFPPSGGGTYPAATPNAGFPGAAgypAPGGYPASGGFPGAPQAGGMPPYPggpgfAVP 98
Cdd:PHA03378 697 PPRAPTPMRPPAA--PPGRAQRPAAATGRARPPAAAPGRARPPAA---APGRARPPAAAPGRARPPAAAPGR-----ARP 766

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 543249361  99 PTGPGFGGYPQQPPAqsyAGGGPAQIPgfPGGQVPSPMP-GPPAAVVqytqgTIQAAPNFDAGRDAEILRKAMKG 172
Cdd:PHA03378 767 PAAAPGAPTPQPPPQ---APPAPQQRP--RGAPTPQPPPqAGPTSMQ-----LMPRAAPGQQGPTKQILRQLLTG 831
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 4-155 7.72e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 7.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   4 PGYPPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAATPNAGfPGAAGYPAPGGYPASGGfPGAPQA 83
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGW-PAKAGGAAPAAPPPAPA-PAAPAA 692

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 543249361  84 GGMPPYPGGPgfAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFPGGQVPSP-----MPGPPAAVVQYTQGTIQAAP 155
Cdd:PRK07764 693 PAGAAPAQPA--PAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPpepddPPDPAGAPAQPPPPPAPAPA 767
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
2-144 1.23e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 1.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   2 SYPGYPPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAATPNAGFPGAAGYPAPGGYPASGGFPGAP 81
Cdd:PRK12323 401 APPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAP 480

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  82 QAGGMPPYPGGPGFAVPPTGPGFGGYPQQPPAQSYAGGGPAQIPGF-------PGGQVPSPMPGPPAAVV 144
Cdd:PRK12323 481 ARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIpdpatadPDDAFETLAPAPAAAPA 550
PHA03247 PHA03247
large tegument protein UL36; Provisional
 7-161 1.95e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 1.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361    7 PPSDGYPAFPGYPPTGQESVYPPAGQyAYPAVPGGFPPSGGGTYPAATPNAGFPGAagyPAPGGYPASGGFPGAPQAGGM 86
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAP-APPAVPAGPATPGGPARPARPPTTAGPPA---PAPPAAPAAGPPRRLTRPAVA 2789

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   87 PPYPGGPGFAVP-----PTGPGFGGYPQQPPAQSYAGGGPAqipgfPGGQVPSPMPGPPAAVVQYTQGTIQAAPNFDAGR 161
Cdd:PHA03247 2790 SLSESRESLPSPwdpadPPAAVLAPAAALPPAASPAGPLPP-----PTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRR 2864
dnaA PRK14086
chromosomal replication initiator protein DnaA;
2-164 3.14e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 39.81  E-value: 3.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   2 SYPGYPPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAATPNAGFPGAAGYPAPGGYPASGGFPGAP 81
Cdd:PRK14086 117 PYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAWPRAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREP 196

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  82 QAGGMppypggpgfavPPTGPGFGGYPQQPPAQSYAGGGPAQIPGFP--GGQVPSPMPGPPAAVVQYTQGTIQAAPNFDA 159
Cdd:PRK14086 197 YDAGR-----------PEYDQRRRDYDHPRPDWDRPRRDRTDRPEPPpgAGHVHRGGPGPPERDDAPVVPIRPSAPGPLA 265


                 ....*
gi 543249361 160 GRDAE 164
Cdd:PRK14086 266 AQPAP 270
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 5-169 7.45e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 38.89  E-value: 7.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361   5 GYPPSDGypAFPGyPPTGQESVYPPAGQYAYPAvpggfppsgggTYPAA--TPNAGFPGAagyPAPGGYPAsggfPGAPQ 82
Cdd:PRK14959 378 ASAPSGS--AAEG-PASGGAATIPTPGTQGPQG-----------TAPAAgmTPSSAAPAT---PAPSAAPS----PRVPW 436

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543249361  83 AGgmppypggpgfaVPPTGPGFGGYPQQPPAQsyagGGPAQIPGFPGGQVPS----PMPGPPAAVVQYTQGTIQAAPNF- 157
Cdd:PRK14959 437 DD------------APPAPPRSGIPPRPAPRM----PEASPVPGAPDSVASAsdapPTLGDPSDTAEHTPSGPRTWDGFl 500

                        170       180
                 ....*....|....*....|
gi 543249361 158 --------DAGRDAEILRKA 169
Cdd:PRK14959 501 efcqgrngQGGRLATVLRQA 520
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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