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Conserved domains on  [gi|542144873|ref|XP_005481490|]
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annexin A7 [Zonotrichia albicollis]

Protein Classification

annexin( domain architecture ID 10446041)

annexin belongs to a family of calcium- and phospholipid-binding proteins that have been implicated in many cellular processes, including channel formation, membrane fusion, vesicle transport, and regulation of phospholipase A2 activity

CATH:  1.10.220.10
Gene Ontology:  GO:0005509|GO:0005544|GO:0048306|GO:0003723
PubMed:  15059252|1646719
SCOP:  4001063
TCDB:  1.A.31

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 3.83e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.02  E-value: 3.83e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 1.81e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 104.09  E-value: 1.81e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKPLAAMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


:

Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 51-160 5.19e-05

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.75  E-value: 5.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  51 PAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGMPPYPGGPGFAVPPTGAGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 542144873 131 QVPSPMPGPPAAVVQCTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
 
Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 3.83e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.02  E-value: 3.83e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 1.81e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 104.09  E-value: 1.81e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKPLAAMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
174-226 1.29e-23

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 93.24  E-value: 1.29e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   174 GTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
405-457 1.76e-22

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 89.77  E-value: 1.76e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   405 GTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKPLAAMIASDTSGDYRKLLLAI 457
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
246-298 2.67e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 86.69  E-value: 2.67e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   246 GTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLISM 298
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
330-379 4.00e-12

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 60.88  E-value: 4.00e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 542144873   330 GTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGL 379
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLL 50
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 51-160 5.19e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.75  E-value: 5.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  51 PAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGMPPYPGGPGFAVPPTGAGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 542144873 131 QVPSPMPGPPAAVVQCTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
 
Name Accession Description Interval E-value
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 161-226 2.61e-31

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 114.49  E-value: 2.61e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  161 RDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 233-298 3.83e-28

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 106.02  E-value: 3.83e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  233 YDAWSLRHAMKGAGTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLISM 298
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 392-457 1.81e-27

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 104.09  E-value: 1.81e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  392 FFAERLYYSMKGAGTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKPLAAMIASDTSGDYRKLLLAI 457
Cdd:pfam00191   1 YDAELLRKAMKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
174-226 1.29e-23

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 93.24  E-value: 1.29e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   174 GTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNVEELILAL 226
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
405-457 1.76e-22

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 89.77  E-value: 1.76e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   405 GTDDSTLIRIVVTRSEIDLVQIKQMFTQMYQKPLAAMIASDTSGDYRKLLLAI 457
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
ANX smart00335
Annexin repeats;
246-298 2.67e-21

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 86.69  E-value: 2.67e-21
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 542144873   246 GTQESVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLISM 298
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLLLAL 53
Annexin pfam00191
Annexin; This family of annexins also includes giardin that has been shown to function as an ...
 317-382 8.84e-19

Annexin; This family of annexins also includes giardin that has been shown to function as an annexin.


Pssm-ID: 395139  Cd Length: 66  Bit Score: 80.21  E-value: 8.84e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 542144873  317 DAQRLYQAgEGKLGTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKTI 382
Cdd:pfam00191   2 DAELLRKA-MKGLGTDESTLIEILATRSNAQLQAIREAYKKLYGKDLEKDIKSETSGDFEKLLLAL 66
ANX smart00335
Annexin repeats;
330-379 4.00e-12

Annexin repeats;


Pssm-ID: 197661  Cd Length: 53  Bit Score: 60.88  E-value: 4.00e-12
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 542144873   330 GTDESCFNMVLASRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGL 379
Cdd:smart00335   1 GTDEKTLIEILASRSNAQLQAIKQAYKKRYGKDLEDDIKSETSGDFEKLL 50
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 51-160 5.19e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.75  E-value: 5.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  51 PAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGMPPYPGGPGFAVPPTGAGFGGYPQQPPAQSYAGGGPAQIPGFPGG 130
Cdd:PRK07764 402 AAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPA 481

                         90       100       110
                 ....*....|....*....|....*....|
gi 542144873 131 QVPSPMPGPPAAVVQCTQGTIQAAPNFDAG 160
Cdd:PRK07764 482 PAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
PHA03378 PHA03378
EBNA-3B; Provisional
 6-172 5.72e-05

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.83  E-value: 5.72e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873   6 YPPSDGYPAFPGYPPTGQESVYPPA---GQYAYPAVPGGFPPSGGGTYPAAPPNAGFPGAAGYP--APGGYPASGGYPGA 80
Cdd:PHA03378 674 YQPSPTGANTMLPIQWAPGTMQPPPrapTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPaaAPGRARPPAAAPGR 753

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  81 PQAGGMPPYPggpgfAVPPTGAGFGGYPQQPPAqsyAGGGPAQIPgfPGGQVPSPMP-GPPAAVVqctqgTIQAAPNFDA 159
Cdd:PHA03378 754 ARPPAAAPGR-----ARPPAAAPGAPTPQPPPQ---APPAPQQRP--RGAPTPQPPPqAGPTSMQ-----LMPRAAPGQQ 818

                        170
                 ....*....|...
gi 542144873 160 GRDAEILRKAMKG 172
Cdd:PHA03378 819 GPTKQILRQLLTG 831
PHA03247 PHA03247
large tegument protein UL36; Provisional
 7-145 2.30e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 2.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873    7 PPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPsgggtyPAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGM 86
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA------PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAA 2774

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 542144873   87 PPYPGGPGFAVPPTG---AGFGGYPQQPPAQSYAGGGPAQIPGFPGGQVPSPMPGPPAAVVQ 145
Cdd:PHA03247 2775 PAAGPPRRLTRPAVAslsESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP 2836
PHA03247 PHA03247
large tegument protein UL36; Provisional
 7-161 2.71e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 2.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873    7 PPSDGYPAFPGYPPTGQESVYPPAGQyAYPAVPGGFPPSGGGTYPAAPPNAGFPGAagyPAPGGYPASGGYPGAPQAGGM 86
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAP-APPAVPAGPATPGGPARPARPPTTAGPPA---PAPPAAPAAGPPRRLTRPAVA 2789

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873   87 PPYPGGPGFAVP-----PTGAGFGGYPQQPPAQSYAGGGPaqiPGFPGGQVPSPMPGPPAAVVQCTQGTIqaAPNFDAGR 161
Cdd:PHA03247 2790 SLSESRESLPSPwdpadPPAAVLAPAAALPPAASPAGPLP---PPTSAQPTAPPPPPGPPPPSLPLGGSV--APGGDVRR 2864
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 13-169 3.84e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.05  E-value: 3.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  13 PAFPGYPPTGQesvyPPAGQYAYPAvpggfppsgggtyPAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGMPPYPGG 92
Cdd:PRK07764 387 VAGGAGAPAAA----APSAAAAAPA-------------AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP 449

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 542144873  93 PGFAVPPTGAGFGGYPQQPPAQSYAGGGPAQIPGFPGGQVPSPMPGPPAAVvqctqgtiqAAPNfdAGRDAEILRKA 169
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAP---------AAPA--GADDAATLRER 515
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 7-143 1.29e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 1.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873   7 PPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAAPPNAGFPGAAGYPAPGGYPASGGYPGAPQAGGM 86
Cdd:PRK07764 644 APGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQ 723

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 542144873  87 PPYPGGPGFAV------PPTGAGFGGYPQQPPAQSYAGGGPAqiPGFPGGQVPSPMPGPPAAV 143
Cdd:PRK07764 724 AAQGASAPSPAaddpvpLPPEPDDPPDPAGAPAQPPPPPAPA--PAAAPAAAPPPSPPSEEEE 784
dnaA PRK14086
chromosomal replication initiator protein DnaA;
2-164 2.36e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 40.19  E-value: 2.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873   2 SYPGYPPSDGYPAFPGYPPTGQESVYPPAGQYAYPAVPGGFPPSGGGTYPAAPPNAGFPGAAGYPAPGGYPASGGYPGAP 81
Cdd:PRK14086 117 PYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAWPRAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREP 196

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 542144873  82 QAGGMppypggpgfavPPTGAGFGGYPQQPPAQSYAGGGPAQIPGFP--GGQVPSPMPGPPAAVVQCTQGTIQAAPNFDA 159
Cdd:PRK14086 197 YDAGR-----------PEYDQRRRDYDHPRPDWDRPRRDRTDRPEPPpgAGHVHRGGPGPPERDDAPVVPIRPSAPGPLA 265


                 ....*
gi 542144873 160 GRDAE 164
Cdd:PRK14086 266 AQPAP 270
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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