|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.21e-172 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 483.17 E-value: 1.21e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKA 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 537421394 321 TSTLISPLTSLTALLLPISPMILTTL 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.10e-140 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 400.72 E-value: 5.10e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSlNPTLLAIMAII 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKA 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 537421394 321 TSTL-ISPLTSLTALLLPISPMILTTL 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.39e-133 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 383.50 E-value: 2.39e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKA 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 537421394 321 TSTLISPLTSLTALLLPISPMILTTL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
7.35e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 359.54 E-value: 7.35e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHV-NK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFeNT 320
|
330 340
....*....|....*....|....*
gi 537421394 320 ATSTLISPLTSLTALLLPISPMILT 344
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.06e-98 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 295.72 E-value: 1.06e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKA 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 537421394 321 TSTLISPLTSLTALLLPISPMILTTL 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
12-338 |
1.21e-88 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 269.88 E-value: 1.21e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 12 SLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTH 91
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 92 PTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAIISAALGGWMGLN 171
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 172 QTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPMLNATLMLALLSL 251
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 252 AGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKATS------TLI 325
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITvygvilSIL 331
|
330
....*....|...
gi 537421394 326 SPLTSLTALLLPI 338
Cdd:MTH00041 332 SSISILGLLLIPL 344
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
4.66e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 203.90 E-value: 4.66e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWv 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 tgqwdITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILfltSHSLNPTLLAIMAII 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAyYSTITLPPNTVNHMKQWHvNKA 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKK-KNK 310
|
330 340
....*....|....*....|...
gi 537421394 321 TSTLISPLTSLTALLLPISPMIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.58e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.93 E-value: 1.58e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 5 AKLISTMSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 85 DITqlthptscLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPI-TILFLTSHSLNPTLLAIMAIISAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 164 LGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNtTKVLKLTTMMISWTKTPMLNAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 537421394 244 LMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
1.01e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.80 E-value: 1.01e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 1 MNPHAKLISTmSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSmsnawv 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 81 TGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAyYSTITLPPNTVN 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-302 |
6.44e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 153.67 E-value: 6.44e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 12 SLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAwvtgqwdITQLTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SNLYLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 92 PTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHslNPTLLAIMAIISAALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 172 QTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPMLNATLMLALLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 537421394 252 AGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-299 |
3.71e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 147.19 E-value: 3.71e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQL--- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaa 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 90 --THPTSCLLLTIAIAM-------KLGLVPFHFWFPEVLQGSSMTTALLLSTVLK----FPPITILFLTSHSLNP---TL 153
Cdd:COG1007 192 laAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 154 LAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTI-IIIYNPN-LTLLTFYL--YTLMTATVFLTLNTTKVLKLTT 229
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLLSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 537421394 230 MMIS-----WTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYY 299
Cdd:COG1007 352 EEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-299 |
4.28e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 128.01 E-value: 4.28e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 93 TS------------CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLK---FPPIT----ILFLTSHSLNPTL 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrllvVAFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 154 LAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTL--LTFYL--YTLMTATVF--LTLNTTKVLKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 537421394 228 TTM----MISWTKtPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYY 299
Cdd:PRK05777 353 ESIsdfaGLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
7.69e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 125.14 E-value: 7.69e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLI-SKSHHPRAIEATIKYFLVQATASALLLFS-------------SMSNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 79 WVTGQWDITQLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFltSHSLNPTLLAIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 159 IISAALGGWMGLNQTQIRKILAFSSISHMGWMTIII----IYNPNLTLLTFYLYTLMTATVF---LTLNTTKVLKLTTMM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 537421394 232 ISwTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
6.17e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 118.97 E-value: 6.17e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 88 QLTHPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLL-AIMAIISAALGg 166
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIcAVLSIIYGAIG- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 167 wmGLNQTQIRKILAFSSISHMGWMTIIIIYNPN----LTLLTFYLYTLMTATVF---LTLNTTKVLKLTTMMISwTKTPM 239
Cdd:MTH00199 265 --ALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiqASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPV 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 537421394 240 LNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
1.39e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.13 E-value: 1.39e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 93 TSC------------LLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLK---FPPITILFLTS----HSLNPTL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYIlfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 154 LAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGW--MTIIIIYNPNLTLLTFYL--YTLMTATVFLTLNTTKVLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 537421394 227 ---LTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.33e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 111.64 E-value: 2.33e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 23 SNHWVMAWTGLEINTLAIIPLI-SKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 91 HPTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMT-TALLLSTVLKFPPITILFLTS--HSLNPT---LLAIMAIISAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 165 GGWMGLNQTQIRKILAFSSISHMGWMTIII----IYNPNLTLLTFYLYTLMTATVFL-----TLNTTKVLKLTTMMISWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 537421394 236 KTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
7.81e-26 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 107.16 E-value: 7.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 92 ---------PTSCLLLTIAIAMKLGLVPFHFWFPEVL-QGSSMTTALLLSTVLK-------------FPPITILFLTshs 148
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 149 lnpTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLY----TLMTATVFLT----LN 220
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 537421394 221 TTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.38e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 98.78 E-value: 1.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 15 LGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAI---------EATIKYFLVQATASALLLFSSMSNAWVTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 84 --WDITQLTHPTS----------CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFppITILFLTSHSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 152 TLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIII-------IYNPNLTLLTFYLYTLMTATVFLTL----- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 220 -------------NTTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 537421394 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.40e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 86.60 E-value: 1.40e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 51 RAIEATIKYFLVQATASALLLF---------------SSMSNAWVTgqwdiTQLTHPTSCLL----LTIAIAMKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYgfswlyglsggeielQEIVNGLIN-----TQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 112 HFWFPEVLQGS-----------SMTTALLLSTVLkfppITILFLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILA 180
Cdd:CHL00049 234 HQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 181 FSSISHMGWMTI-IIIYNPN------LTLLTFYLYTLMTATVFLTLNTtkvLKLTTMMI-----SWTKTPMLNATLMLAL 248
Cdd:CHL00049 310 YSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNLGTFACIVLFG---LRTGTDNIrdyagLYTKDPFLALSLALCL 386
|
250
....*....|....*
gi 537421394 249 LSLAGLPPLTGFLPK 263
Cdd:CHL00049 387 LSLGGIPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-292 |
3.54e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 76.27 E-value: 3.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 38 LAIIP---LISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQW--DITQLTH---PTS-----CLLLTIAIAM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 105 KLGLVPFHFWFPEVLQGSSMTTALLLSTVL---------KFPpITILFLTSHSLNPtLLAIMAIISAALGGWMGLNQTQI 175
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAP-LLAALGVIGIIYGALVALAQTDL 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 176 RKILAFSSISHMGWMTI-IIIYNPN-LTLLTFYL--YTLMTATVFLTL----NTTKVLKLTTMMISWTKTPMLNATLMLA 247
Cdd:COG1008 300 KRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLA 379
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 537421394 248 LLSLAGLPPLTGFLPKWLIIQELTKqemtlAATIMAMLSLLGLFF 292
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.23e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.62 E-value: 1.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 50 PRAIEATIKYFLVQATASALLLF---------------SSMSNAWVTGQWDITQLThptscLLLTIA-IAMKLGLVPFHF 113
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSPSLGLALA-----LVFVIAgIAFKISAVPFHQ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 114 WFPEVLQGSSMTTALLLSTVLKFP--PITILFLTSHSLNPT-----LLAIMAIISAALGGWMGLNQTQIRKILAFSSISH 186
Cdd:PRK02504 232 WTPDVYEGSPTPVVAFLSVGSKAAgfALAIRLLVTAFPSFDeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQ 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 187 MGWMTIIIIYNPN--LTLLTFYL--YTLMTATVFLTLnTTKVLKLTTMMIS-----WTKTPMLNATLMLALLSLAGLPPL 257
Cdd:PRK02504 312 AGFVMIGLVAGTEagYASMVFYLlaYLFMNLGAFACV-ILFSLRTGTDQISdyaglYQKDPLLTLGLSLCLLSLGGIPPL 390
|
....*.
gi 537421394 258 TGFLPK 263
Cdd:PRK02504 391 AGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-334 |
1.27e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.45 E-value: 1.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 33 LEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTH--PTSCLLLT------IAIAM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 105 KLGLVPFHFWFPEVLQG-SSMTTALLLSTVLKFPPITILFLTSHSLNP---------TLLAIMAIISAALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 175 IRKILAFSSISHMGWMTIIIIYNPNLTLL--TFYL--YTLMTATVFL-------TLNTTKVLKLTTMMiswTKTPMLNAT 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaievTYGTRRLSELSGLG---RRMPLTAAA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 244 LMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHmkqwHVNKATST 323
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA----PKQEAPLG 447
|
330
....*....|.
gi 537421394 324 LISPLTSLTAL 334
Cdd:PRK08375 448 MLAPSLALALL 458
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
1.42e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.43 E-value: 1.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 50 PRAIEATIKYFLVQATASALLLFSSMSNAWVTGQW----DITQLTHPTSC-----LLLTIAIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 120 QGSSMTTALLLSTVLKFPPITI------LFLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 194 IIYNPNLTLL--TFYLYT--LMTATVFLTLNT----TKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 537421394 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
3.34e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 67.33 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 34 EINTLA---IIPLISKshhpRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDIT-------QLTHPTSCLLLTIAIA 103
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 104 ----MKLGLVPFHFWFPE-----------VLQGS-SMTTALLLSTVLKFPPITILFLT-----SHSLNPTLLAIMAIISA 162
Cdd:PRK08668 204 afgvAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 163 ALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTL-----------LTFYLYTLMTATVFLTLNTTKVLKLTTMM 231
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFagglfhvfnhaLFKGLFFLIFAAVIYRTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 537421394 232 iswTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAY 298
Cdd:PRK08668 364 ---EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.75e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 1.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 33 LEINTLAIIPLIS-KSHHPRAIEATIKYFLVQATASALLLFSSmsnAWVTGQWDI-------------TQLTHPTSCLLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 99 TIAIAMKLGLVPFHFWFPEVLQG--SSMTTALLLSTVLKFPPIT-ILF-LTSHSLNPT----LLAIMAIISAALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALArVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 171 NQTQIRKILAFSSISHMGWMTI---IIIYNPNLTLLTFYLYTLMTATVFLTLNTT--KVLKLTT--MMISWTKTPMLNA- 242
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgVGLAALGDPAMASYGEIALAGGIYHIVNHAlyKALLFLTagAVIYETGTRNLNEl 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 537421394 243 ------------TLMLALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 gglartmpkttiAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
1.03e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 62.86 E-value: 1.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 48 HHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTH-----------PTSCLLLTIAIAMKLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptilsspllTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 117 EVLQGSSMTTALLLST---------VLKFPPITilfltshSLNPTLLAIMAIISAA---LGGWMGLNQTQIRKILAFSSI 184
Cdd:COG1009 236 DAMEGPTPVSALLHAAtmvkagvylLARLSPLF-------ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 185 SHMGWMTIIIIYNpNLTLLTFYLYT---------LMTATVFLTLNTTKVLKLTTMmisWTKTPMLNATLMLALLSLAGLP 255
Cdd:COG1009 309 SQLGYMFLALGVG-AYVAALFHLLThaffkallfLGAGSVIHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIP 384
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 537421394 256 PLTGFLPKWLIIQE-LTKQEMTLAATIMAML-SLLGLFFYLRLAY 298
Cdd:COG1009 385 PFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-292 |
1.17e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 59.38 E-value: 1.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATA------SALLLFSSMSNAWVTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 87 TQLTHPT----------SCLLLTIAIAMKLGLVPFHFWFPEV-LQGSSMTTALLLSTVLKFPPITILFLTS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 149 LNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 537421394 221 TTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFF 292
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.39e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 58.96 E-value: 1.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 55 ATIKYFLVQATASALLLFSSMSNAWVTGQWD------ITQ-LTHPTSCLLLTIAI---AMKLGLVPFHFWFPEVLQGSSM 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 125 TTALLLSTVL-KFPPITI------LFLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYN 197
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 198 PNLTLL---------------TFYLYTLMTATVfltlNTTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLP 262
Cdd:PRK07363 318 TQLSLLgavaqmishglilalLFHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVA 393
|
....*.
gi 537421394 263 KWLIIQ 268
Cdd:PRK07363 394 EFIVFQ 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-293 |
1.40e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.19 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 53 IEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQL-----------THPTSCLLLTIAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 122 SSMTTALLLSTVLK-------FPPITILFLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTI-I 193
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 194 IIYNPN-LTLLTFYLYTLMTATVFLTLNTTKVLKLT------TMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHDMVVKTALFLIAGSLVRLTgyrslqYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|...
gi 537421394 267 IQ-ELTKQEMTLAAT-----IMAMLSLLGLFFY 293
Cdd:PRK12663 396 VQgALDNGAYILLALmlitsLITMYSLFRIFFL 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
2.17e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 58.40 E-value: 2.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 20 TISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSS----MSNAWVTGQWDI----TQLTH 91
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyANAATVMGDGEMailwTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 92 PTSCL---LLTIAIAM-------KLGLVPFHFWFPE-----------VLQGSSMTTALLLstVLKFPPITILFLTSHSLN 150
Cdd:PRK06458 204 HASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRYYILIDAAIGSDFPG 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 151 PtLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLM-----TATVFLTLNTTKvl 225
Cdd:PRK06458 282 R-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltkSAIFFASGNVLQ-- 358
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 537421394 226 KLTTMMIS-----WTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 359 KYGTRDINvirglLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
2.88e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 58.29 E-value: 2.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 50 PRAIEATIKYFLVQATASALLLFSSMSNAWV----TGQWDITQLTHPTSC--------LLLTIAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 118 VLQ-----GSSMTTALLLST----VLKFPpITILFLTSHSLNPtLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygLLRFS-LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 189 WMTI-IIIYN-PNLTLLTFYL--YTLMTATVFLTLNttkVL--KLTTMMIS-----WTKTPMLNATLMLALLSLAGLPPL 257
Cdd:PRK05846 315 FVTLgIFAGNqLGIQGAIFQMisHGLSSAALFLLVG---VLydRLHTRDIAdygglAKVMPVLAAFFLFFAMASLGLPGT 391
|
250
....*....|
gi 537421394 258 TGFLPKWLII 267
Cdd:PRK05846 392 SGFVGEFLIL 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.58e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 55.73 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 33 LEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTH--PTSCLLLTIAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 111 FHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPT--LLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 189 WmtiiIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLT----TMMISWTKTPmlnatLMLALLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTelisQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 537421394 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
1.81e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.09 E-value: 1.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 80 VTGQWDITQL-THPTSCLLLTIAIAM-------KLGLVPFHFWFPEVLQGSSMTTALLLST---------VLKFPPItil 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAamvkagiylVARLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 143 FLTSHSLNPTLLaIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIII-IYNPNLTL--LTFYL-YTLMTATVFLT 218
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALagLAMLLaHALFKAALFLV 338
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 537421394 219 L-------NTTKVLKLTTMmisWTKTPMLNATLMLALLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VgiidhstGTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
8.20e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.77 E-value: 8.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 109 VPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPT-----LLAIMAIISAALGGWMGLNQTQIRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 184 ISHMGWMTIIIIYNPNLTLLTFYLY----TLMTATVFLTLNT----TKVLKLTTMMISWTKTPMLNATLMLALLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|....
gi 537421394 256 PLTGFLPKWLIIQELTkqEMTLAATIMAMLSLLG 289
Cdd:PRK12647 372 PLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
2.17e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 52.39 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 38 LAIIPL---ISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTG-------QWDITQLTHPTSCLLLT---IAIAM 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLApilVGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 105 KLGLVPFHFWFPEV-LQGSSMTTALLLSTVLKFPPITIL------FLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 178 ILAFSSISHMGWMTIIIIYNPNLTL-----------LTFYLYTLMTATVFLTLNTTKVLKLTTMMISWTKTPMLNATLML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSIlaavfqmishgLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 537421394 247 ALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
5.16e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.19 E-value: 5.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 34 EINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQ-----LTHPTS------CLLLTIAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSpviyggLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 103 AMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITI------LFLTSHSLNPTLLAIMAIISAA--LGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAmvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 175 IRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYT----LMTATVFL----TLNTTKVLKLTTMMISWTKTPMLNATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 247 ALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSlLGLFFYLRLAYYSTITLPPNTVNHMKQWHVNKATSTLIS 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVS-IGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLA 448
|
330
....*....|....*...
gi 537421394 327 PLTSLtALLLPISPMILT 344
Cdd:PRK06277 449 VLTIL-CIILGLFPDLVT 465
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
8.32e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 50.33 E-value: 8.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 56 TIKYFLVQATASALLLFSSMSNAWVTGQWD-------ITQLTHPTSCLLLTIAI------AMKLGLVPFHFWFPEVLQGS 122
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYAP 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 123 SMTTALLLSTVLKFPPI-------TILFLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTI-II 194
Cdd:PRK07691 240 PIAIAALFGALLTKVGVyaiartfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVgVA 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 195 IYNPNLTLLTFYlYT----LMTATVFL----TLNTTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07691 320 MMTESGMIGAIY-YLihdmIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFI 398
|
250 260 270
....*....|....*....|....*....|
gi 537421394 267 IQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:PRK07691 399 VEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
1.06e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.21 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 96 LLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTV-LKFPPITILFLTSHSLNPTL-----LAIMAIISAALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 170 LNQTQIRKILAFSSISHMG--------WMTIIIIYNPNLTLLTFY--LYTLMTATVFLTlnttkVLKLTTMMIsWTKT-- 237
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKS-----VLFLGAGSV-WFRTgh 337
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 537421394 238 -------------PMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 338 rdieklggigkkmPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
3.61e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.89 E-value: 3.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 29 AWtglEINTLAIIPLISKSHhPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHPTS-----------CLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 98 LTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITIL--FLTSHSLNPT---LLAIMAIISAALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 173 TQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYT----LMTATVFLTL----NTTKVLKLTTMMISWTKTPMLNATL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 537421394 245 MLALLSLAGLPPLTGFLPK 263
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-332 |
4.99e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.15 E-value: 4.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 95 CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 170 LNQTQIRKILAFSSISHMGWMTIII-IYNPNLTLLTFYLYTLMTATVFLT-------LNTTKVLKLTTMMISWtkTPMLN 241
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSagsvihaLSDEQDMRKMGGLISF--LPLTY 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 242 ATLMLALLSLAGLPPLTGFLPKWLIIQELTKQE-MTLAATIMAMLSLLGLFFYLRLAYYSTITLPPNTVNHMKqwHVNKA 320
Cdd:MTH00020 371 IFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFF--HLHEG 448
|
250
....*....|..
gi 537421394 321 TSTLISPLTSLT 332
Cdd:MTH00020 449 DWNLLLPLGILA 460
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
9.58e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 42.24 E-value: 9.58e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 537421394 291 FFYLRLAYYSTITLPPNTVNHMKQWHVNK-ATSTLISPLTSLTALLLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNStKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-277 |
1.00e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.09 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 7 LISTMSL-LLGTTITISSNHWVM---AWTGLEINTLAIIPLISKSHHPRAIeatikyFLVQATASALLLFSSMSNAWV-T 81
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 82 GQWDITQLTHPTSCLLLTIAIAMKLGLVPFHF--WFPEVLQGSSMTTALLLSTVLK----FPPITILFLTSHSLNPTL-- 153
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFgl 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 154 -LAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWM-----TIIIIYNPNLTLLTFYLYTLMT-------ATVFLTLN 220
Cdd:PRK06459 228 tILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvAKTGLFLS 307
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 537421394 221 TTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTL 277
Cdd:PRK06459 308 SGLQEKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVL 364
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
1.13e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.89 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 33 LEINTLAIIPLISKSHHPRAIEATIKYFLVQATAS------ALLLFSSMSNAWVTGQWDITQLTHPTSCLLLTIAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 107 GLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNP------TLLAIMAIISAALGGWMGLNQTQIRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 181 FSSISHMGWMTIII---IYNPNLTLL--TFYLYT---------LMTATVFLTLNTTKVLKLTTMMiswTKTPMLNATLML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 537421394 247 ALLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
75-300 |
1.28e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 46.95 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 75 MSNAWVT--GQWDITQLTHPTS-----CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITIL----- 142
Cdd:MTH00209 151 LSIAWMLmhGNWNIFYLNFNSNlgsviSVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLirffp 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 143 FLTSHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYN-PNLTLLTFYLYTLMTATVFLTL-- 219
Cdd:MTH00209 231 SLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAgn 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 220 ---NTTKVLKLTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSL-LGLFFYLR 295
Cdd:MTH00209 311 iihSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMR 390
|
....*
gi 537421394 296 LAYYS 300
Cdd:MTH00209 391 LSYFS 395
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
96-268 |
1.31e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.88 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 96 LLLTIAIAMKLGLVPFHFWFPEVLQG----------SSMTTALLLSTVLKFP-----PITILFLTshslnptllaIMAII 160
Cdd:MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGptpvsalihaATMVTAGVFLMIRSFPlfekaPLTLLIIT----------IFGAL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLKLTTM-------MIS 233
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkMGG 378
|
170 180 190
....*....|....*....|....*....|....*.
gi 537421394 234 WTKTPMLNATLML-ALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 379 LIHSIPFTYTMMLiGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.01e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 46.36 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 48 HHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHPTSCL--------------LLTIAIAMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 114 WFPEVLQGSSMTTALLLSTVLKFPPITILFLTSHSLNPT-----LLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 189 WMTIIIIYNP------NLTLLTFYLYTLMT--ATVFLTLN-------TTKVLKLTTMMISWTKTPMLNAtlmLALLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTyhepglGVAAATFHLLNHATfkACLFLVAGivaheaaTRDIRKLGGLRKEMPITFIVAS---IAALAMAG 392
|
250
....*....|
gi 537421394 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-344 |
2.26e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.91 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 82 GQWDITQLTH----PTSCLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITIL-----FLTSHSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQtdmnNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 153 LLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMG-WMTIIIIYNPNLTLLTFYLYTLMTATVFLTLNTTKVLK----- 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHhhsqd 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 227 LTTMMISWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSL-LGLFFYLRLAYYSTITLP 305
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATaLTAAYSTRFTLAVLWSPN 404
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 537421394 306 PNTVNHmkqwHVNKATSTLISPLTSLTA------------LLLPISPMILT 344
Cdd:MTH00207 405 SSSPYH----HLEDEDKSLTTPMLLLTLgaitsgsalnwwLPTPQEEPILP 451
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
4.31e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.11 E-value: 4.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 55 ATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHPT-----SCLLLTIAIAMKLGLVPFHFWFPEVLQGS-SMTTAL 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 129 LLSTVLKFPPITILFLTSHSLNP-----TLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMG--------WMTIIII 195
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 196 YNPNLTLLT-------------FYLYTLMTA-TVFLTLNTTKVLKLTTMMISwtkTPMLNATLMLALLSLAGLPPLTGFL 261
Cdd:PRK08667 323 GLDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFA 399
|
....*....
gi 537421394 262 PKWLIIQEL 270
Cdd:PRK08667 400 SELLLYESF 408
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
5.67e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.72 E-value: 5.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 96 LLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLS----TVLKFPPITI--------LFLTSHSLNpTLLAIMAIISAA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 164 LGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLY----TLMTATVFLT-------LNTTKVLKLTTMmi 232
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVsgsisyhFGTTKLEDCLNL-- 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 537421394 233 sWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:PRK12662 370 -WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
7.04e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.57 E-value: 7.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 96 LLLTIAIAMKLGLVPFHFWFPEVL-QGSSMTTAL---LLSTVLKFPPI---TILFlTSHSLNpTLLAIMAIISAALGGWM 168
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 169 GLNQTQIRKILAFSSISHMGWMTI-IIIYNP-NLTLLTFYL--YTLMTATVFLTL-------NTTKVLKLTTMMISwtkT 237
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFgIALSTVaGLSGAIYYVahHITVQTTLFLVVglierqaGSSSLRRLGGLAKA---S 367
|
170 180 190
....*....|....*....|....*....|.
gi 537421394 238 PMLNATLMLALLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
7.13e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 44.25 E-value: 7.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 55 ATIKYFLVQATASALLLFSSMSNAWVTGQ--WDITQLTH---PTSCLLLT-----IAIAMKLGLVPFHFWFPEVLQGSSM 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 537421394 125 TTALLLSTVL-KFPPITILFLT------SHSLNPTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIII 194
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNvqmlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-190 |
9.46e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 43.92 E-value: 9.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 10 TMSLLLGTTITISSNHWVM---AW--TGLEINTLaiipLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQW 84
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 85 DITQL-----THPTS------CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTV--------LKFPPitiLFLT 145
Cdd:PRK08168 182 SLSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQ 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 537421394 146 SHSLNpTLLAIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWM 190
Cdd:PRK08168 259 APPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
1.35e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.76 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 100 IAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTV-----------LKFPpitILFLTSHSLNPTLLAiMAIISAALGGWM 168
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIllklggyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFA 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 169 GLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTL---MTATVFLTLNTTKVLKLTTMMISWTK-----TPML 240
Cdd:MTH00226 314 TCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIW 393
|
170 180
....*....|....*....|....*..
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 394 GTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
100-194 |
1.73e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 43.40 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 100 IAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVL----KFPPITI---LFLTSHSLNPTLLAI---MAIISAALggwMG 169
Cdd:CHL00011 219 IAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlkmgAYGLIRInmeLLPHAHSIFSPWLVIvgaIQIIYAAS---TS 295
|
90 100
....*....|....*....|....*
gi 537421394 170 LNQTQIRKILAFSSISHMGWMTIII 194
Cdd:CHL00011 296 LGQRNLKKRIAYSSVSHMGFIIIGI 320
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-303 |
4.73e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 41.92 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 95 CLLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALL----LSTVLKFPPITILFLTSHSlnPTLLAIMAII---SAALGGW 167
Cdd:MTH00210 214 CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIhaatMVTAGVFLIIRSGPLFEGS--PLALTIVTILgalTAFFAAT 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 168 MGLNQTQIRKILAFSSISHMGWMTIII-IYNPNLTLLTFYLYTLMTATVFLTLNTT-----------------KVLKLTT 229
Cdd:MTH00210 292 VGVVQNDLKKVIAYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqdmrkmggliKSIPFTY 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 537421394 230 MMIswtktpmlnatlMLALLSLAGLPPLTGFLPKWLIIqELT--KQEMTLAATIMAMLSLLGLFFYLRLAYYSTIT 303
Cdd:MTH00210 372 VMI------------LIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT 434
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-303 |
8.40e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.96 E-value: 8.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 11 MSLLLGTTITISSNHWVMaWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWV-TGQWDITQ- 88
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTkTGNLDFVSg 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 89 --LTHPTSCLLLTIAIAM--KLGLVPFHFWFPEVLQGSSMTTALLLSTVL----KFPPITILFLTSHSLNPTLLAIM--- 157
Cdd:PRK06589 203 glFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfnw 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 158 ----AIISAALGGWMGLNQTQIRKILAFSSISHMGW--MTIIIIYNPNLTLLTFYLYT--LMTATVFLTLNTTKVLKLTT 229
Cdd:PRK06589 283 lifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKKED 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 230 MMISWTKT----PMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQE-------MTLAATIMAMLSLLGLFFYLRLAY 298
Cdd:PRK06589 363 QVDKLHGTsksfPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqpwlsiiVMLVVIASSILSALYLLKILSSIY 442
|
....*
gi 537421394 299 YSTIT 303
Cdd:PRK06589 443 KPSLS 447
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-300 |
1.16e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.53 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 21 ISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQ----LTHPTSCL 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 97 LLTIAIA-------MKLGLVPFHFWFPEVLQGSS---------MTTALLLSTVLKFPPITILFLTSHSLNPTLLAIMAII 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 161 SAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTLLTFYLYTLMTATVFLTLnttkvlkLTTMMISWTKTPmL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFL-------IDAYNESYKREP-N 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 241 NATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRLAYYS 300
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-192 |
1.88e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.05 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 100 IAIAMKLGLVPFHFWFPEV-----LQGSSMTTALLLST----VLKFpPITILFLTSHSLNPtLLAIMAIISAALGGWMGL 170
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAhveapVAGSVILAGILLKLggygFLRF-SWPLFPAASEYFAP-LIVMLSVIAVIYGSLTTC 294
|
90 100
....*....|....*....|..
gi 537421394 171 NQTQIRKILAFSSISHMGWMTI 192
Cdd:MTH00204 295 RQVDFKRLIAYSSVAHMGLVPL 316
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
60-270 |
2.77e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 39.49 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 60 FLVQATASALLLFSSMSNAWVTGQWDITQLthptscLLLTIAIAMKLGLVPFHFWFPEVLQGS-SMTTALLLSTVLK--- 135
Cdd:PRK06521 184 FGLLARESGSYDFAAMRAAHLSPFWASLVF------LLALFGFGAKAGLVPLHVWLPRAHPAApSHVSALMSGVMLKvai 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 136 --FPPITILFLTSHSL--NPTLLAIMAIiSAALGGWMGLNQTQIRKILAFSSISHMGWM------TIIIIYN--PNLTLL 203
Cdd:PRK06521 258 ygILRVVFDLLGAPGWwwGVLVLALGAI-SAVLGVLYALAEHDLKRLLAYSTIENIGIIfvglglAMVFIAYgmPLLAAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 204 TFY--LYTLMTATVF---LTLNTTKVLK------------LTTMMiSWTKTPMLnatlmLALLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06521 337 ALTaaLYHLLNHALFkslLFLGAGAVLHatgtrdmeklggLIRRM-PWTAWAFL-----IGCLAISALPPLNGFVSEWLL 410
|
....
gi 537421394 267 IQEL 270
Cdd:PRK06521 411 LQSL 414
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
96-272 |
4.74e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.97 E-value: 4.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 96 LLLTIAIAMKLGLVPFHFWFPEVLQGSSMTTALLLSTVLKFPPITILF-----LTSHSLNPTLLAIMAIISAALGGWMGL 170
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplLGLSNMYIYIVTFVGLITMLFGSITAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 171 NQTQIRKILAFSSISHMGW-MTII-----IIYNPNLTLLTFY-------LYTLMTATVFLTL------------NTTKVL 225
Cdd:PRK12646 294 KQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAlfmgvgiidheaGTRDIR 373
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 537421394 226 KLTTMMISWtktPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 374 ILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
8.19e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 37.82 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLVQATASALLLFSSMSNAWVTGQWDITQLTHP 92
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 93 TSCL----------LLTIAIAMKLGLVPFHFWFPEVLQGSSM-TTALLLSTVLK---FPPITILFLTSHSLNPT----LL 154
Cdd:PRK08377 197 AGTIdptvaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 155 AIMAIISAALGGWMGLNQTQIRKILAFSSISHMGWMTIIIIYNPNLTL-----------LTFYLYTLMTATVFLTLNTTK 223
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVdagvfhminhaIVKALLFLAVGYVGITLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 537421394 224 VLKLTTMMiswTKTPMLNATLMLALLSLAGLPPLTGFLPKWLIIQELTKQEMTLAATIMAMLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEGLG---KRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
95-267 |
8.40e-03 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 37.83 E-value: 8.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 95 CLLLTIAIAMKLGLVPFHFWFPEVLQG----------SSMTTALLLSTVLKFPpitiLFltshSLNPTLLAIMAIISAA- 163
Cdd:PRK06590 220 CLLLFIGAMGKSAQFPLHTWLPDAMEGptpvsalihaATMVTAGVYLVARMSP----LF----ELSPEALLFVAIVGAVt 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 537421394 164 --LGGWMGLNQTQIRKILAFSSISHMGWMTI---IIIYNpnltlltFYLYTLMT-----ATVFL-----------TLNTT 222
Cdd:PRK06590 292 alFAAFIGLVQTDIKRVLAYSTMSQLGYMFLalgVGAYA-------AAIFHLMThaffkALLFLgagsvihamhhEQDIR 364
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 537421394 223 KVLKLttmmisWTKTPMLNATLMLALLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06590 365 KMGGL------RKKMPVTYATFLIGTLALIGIPPFAGFFSKDEIL 403
|
|
| |
