|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 691.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 81 QNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 161 LVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 241 YGIIRITMMFTPLI-EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHG 319
Cdd:MTH00068 241 YGILRISILLTPLSkELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 320 LISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 53686442 400 LITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSG 455
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 617.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 81 QNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 161 LVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 241 YGIIRITMMFTPLIE-FSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHG 319
Cdd:MTH00124 241 YGIIRITLLLPPLSNtLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 320 LISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 53686442 400 LITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSG 455
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 571.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 81 QNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 161 LVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 241 YGIIRITMMFTPLIEF-SYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHG 319
Cdd:MTH00110 241 YGMMRITIILNPLTEFmAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 320 LISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 400 LITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSGF 456
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 532.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITT-NKYLGVDKISSPLLVLTCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSlNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 80 SQNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 160 LLVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 240 GYGIIRITMMFTPLI-EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISH 318
Cdd:MTH00127 241 GYGMMRMMVMLDPLTkELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 319 GLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLG 398
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 399 TLITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSG 455
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-453 |
3.16e-162 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 465.57 E-value: 3.16e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 3 KIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLEL-MITTNKYLGVDKISSPLLVLTCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVgWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 82 NHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 162 VALLFLLTSLNSLSMnllTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSL---YILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 242 GIIRITMMFTPLI-EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGL 320
Cdd:MTH00206 238 GMMRIILILGPSTkLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 321 ISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTL 400
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 53686442 401 ITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEIL 453
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.04e-146 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 426.31 E-value: 1.04e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKY-LGVDKISSPLLVLTCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLsLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 80 SQNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 160 LLVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 240 GYGIIRITMMF--TPLIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMIS 317
Cdd:MTH00044 241 GYGLIRLINLFslPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 318 HGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGL 397
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 398 GTLITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILS 454
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
53-457 |
5.96e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 346.44 E-value: 5.96e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 53 NKYLGVDKISSPLLVLTCWLLPLMILASQNHLKTNPQSrqQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLII 132
Cdd:MTH00150 17 SELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKS--SSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 133 ITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIhqeMFLMNPTNKLLWLGCLVAFMVKMPLYGA 212
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISS---LRKLLSSMGLWGLLVFLAFLVKLPMYPF 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIE-FSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSIS 291
Cdd:MTH00150 172 HLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSsFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 292 HMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPT 371
Cdd:MTH00150 252 HMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 372 TNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPE 451
Cdd:MTH00150 332 LNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSD 411
|
....*.
gi 53686442 452 ILSGFS 457
Cdd:MTH00150 412 LLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
3.90e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 340.21 E-value: 3.90e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNStinsLIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSL----LFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 81 QNHLKTNPQSrqQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYS--NLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 161 LVALLFLLTSLNSLSMNLltihqeMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFL------LNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 241 YGIIRITMMFTPLI-EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHG 319
Cdd:MTH00163 229 YGLLRVMSFFSKLGlKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 320 LISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 400 LITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSGF 456
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
32-453 |
4.94e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 314.22 E-value: 4.94e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 32 LIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILASQNHLKTNPQSRqqMYISMLATLQVALIMAFS 111
Cdd:MTH00205 29 LIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSK--LFTVSVIMLLLILILSFS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 112 STELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTihqEMFLMNPT 191
Cdd:MTH00205 107 VDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF---PLNFSDFY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 192 NKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFII-LALWGVLM 270
Cdd:MTH00205 184 LFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFsISLWGGVM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 271 TGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTT 350
Cdd:MTH00205 264 TGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNT 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 351 LPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHLKLTLPTHT 430
Cdd:MTH00205 344 FPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISE 423
|
410 420
....*....|....*....|...
gi 53686442 431 REHSLMTMHLLPMFLMMMKPEIL 453
Cdd:MTH00205 424 REYYILILHWFPLNILILKLKIF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
5.83e-100 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 306.67 E-value: 5.83e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPtVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKYLGVDKISSPLLVLTCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 81 QNHLKTNPQSRqqMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 161 LVALLFLLTSLNSLSMNLLTIHQEMFLmnpTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIY---LMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 241 YGIIRITMMFTPL-IEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHG 319
Cdd:MTH00014 235 YGLLRMSSLFMHInKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 320 LISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 53686442 400 LITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILS 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-446 |
3.68e-86 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 271.95 E-value: 3.68e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 55 YLGVDKISSPLLVLTCWLLPLMILASQNHLKTNPQsrqQMYISMLAtLQVALIMAFSSTELTLFYITFEATLIPTLIIIT 134
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK---LYYALLLL-LEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 135 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMFLMNpTNKLLWLGCLVAFMVKMPLYGAHL 214
Cdd:COG1008 153 IWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLT-AQLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 215 WLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPL--IEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTT 372
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 373 NLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFlitQR---GQLPNHLKLTLPTHTREHSLMTMHLLPMFLM 446
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-411 |
1.64e-74 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 242.03 E-value: 1.64e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 55 YLGVDKISSPLLVLTCWLLPLMILASQNHLKTNpqsRQQMYISMLAtLQVALIMAFSSTELTLFYITFEATLIPTLIIIT 134
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKKR---VKFYMAALLW-LEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 135 RWGnQTERLNAGTYFLFYTLAGSLPLLV--ALLFLLTSLNSLSMNLLTIHQEMFLMNpTNKLLWLGCLVAFMVKMPLYGA 212
Cdd:PRK05846 153 VWG-GKNRIYAATKFFLYTLLGSLLMLVaiIYLVVVYYNATGTFDIADLLNLPLPPG-VQYWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLI--EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSI 290
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 291 SHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPP 370
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 53686442 371 TTNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFL 411
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQ 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-421 |
7.51e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 239.84 E-value: 7.51e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASqnhlKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILAS----WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLFLLtSLNSLSMNLLTIHQEMFLMNpTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLELLNLPLPFG-VQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTP--LIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHM 293
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 294 GLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTN 373
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 53686442 374 LWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNH 421
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNP 433
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-453 |
3.33e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 219.93 E-value: 3.33e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 55 YLGVDKISSPLLVLTCWLLPLMILASQNHLKTNPQSrqqmYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIIT 134
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIKFLFKE----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 135 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQemfLMNPTNKLLWLGCLVAFMVKMPLYGAHL 214
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLSIQKWLLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 215 WLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLI-EFSYPFII-LALWGVLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAsEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTT 372
Cdd:MTH00204 311 MGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSC 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 373 NLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEI 452
Cdd:MTH00204 391 NFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFI 470
|
.
gi 53686442 453 L 453
Cdd:MTH00204 471 I 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
56-453 |
4.63e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 209.14 E-value: 4.63e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQNHLKtnpqSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQemfLMNPTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:MTH00217 152 WGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK---IEKELQYFIFLGFFLSLAIKIPKIPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLI-EFSYPFI-ILALWGVLMTGLICTRQTDLKSLIAYSSISHM 293
Cdd:MTH00217 229 LPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEAsEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 294 GLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTN 373
Cdd:MTH00217 309 GLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCN 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 374 LWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHLKLTLPTHTRE-HSLMTMHLLpMFLMMMKPEI 452
Cdd:MTH00217 389 FVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREfYVLLPLVFL-IYLMGIFPFI 467
|
.
gi 53686442 453 L 453
Cdd:MTH00217 468 I 468
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-399 |
1.36e-60 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 199.46 E-value: 1.36e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 112 STELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMFLMNPT 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 192 NKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEF-SYPFIILALWGVLM 270
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 271 TGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLA-NTNYERTHSRTMLLARGLQT 349
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 53686442 350 TLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT 399
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-450 |
1.00e-56 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 195.53 E-value: 1.00e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQNHLKTNPQSrqqmYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLtSLNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY-NIHGTTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPL--IEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHM 293
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgaQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 294 GLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTN 373
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 53686442 374 LWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKP 450
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYP 489
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-409 |
2.93e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 178.30 E-value: 2.93e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQNhlktnPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLltihQEMFLMNPTNK---LLWLGCLVAFMVKMPLYGA 212
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDL----AELGAKSYPLAlelLLYAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTP--LIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSI 290
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPdaHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 291 SHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPP 370
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPG 364
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 53686442 371 TTNLWGELTIMVSLFNWSPW-------TILITGLGTLITAAYTLYM 409
Cdd:PRK12561 365 MSGFVSELTVFLGITSSDVYsstfrtiTILLAAVGLILTPIYLLSM 410
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-422 |
6.76e-42 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 155.24 E-value: 6.76e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 53 NKYLGVDKISSPLLVLTCWLLPLMILASQNHLKtnpqsRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLII 132
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 133 ITRWGNQtERLNAGTYFLFYT-------LAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMflmnptnkLLWLGCLVAFMV 205
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTaisgiliLVSFLGLVWLSGASSFDYEPLRSHTLPLSTQL--------LLLAPILVGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 206 KMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTP--LIEFSYPFIILALWGVLMTGLICTRQTDLKS 283
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPeaWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 284 LIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNL 363
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMIL 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 53686442 364 SNMA---LPPTTNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLYMFLITQRGQLPNHL 422
Cdd:PRK06473 378 GVMAsagIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAEL 439
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
107-408 |
1.59e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 149.67 E-value: 1.59e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 107 IMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNsLSMNLLTIHQEMF 186
Cdd:MTH00094 76 LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFS-LCYFDFFLSWEMF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 187 LMnptnkllwlgCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRItmMFTPLIEFSYPFIILALW 266
Cdd:MTH00094 155 FI----------LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI--LGSLNFVYNNFWIIFSLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 267 GVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARG 346
Cdd:MTH00094 223 GMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNS 302
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 53686442 347 LQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLY 408
Cdd:MTH00094 303 FFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-414 |
1.27e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 142.21 E-value: 1.27e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQNHLKTnpQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRH--ERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMfLMNPTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAE-LDPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMF---TPLIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTT 372
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 53686442 373 NLWGELTIMVSLFNWSPWTILITGL-GTLITAAYTLYMFLITQ 414
Cdd:COG0651 388 GFVSKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
56-343 |
2.48e-36 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 139.70 E-value: 2.48e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQnhlktnPQSR--QQMYISMLA--TLQVALimaFSSTELTLFYITFEATLIPTLI 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRnsRLFYFLMLAmySGQIGL---FSSRDLLLFFIMWELELIPVYL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 132 IITRWGNQtERLNAGTYFLFYTLAGSLPLLvallflltsLNSLSMNLLTIHQEMFLM-NPTNK--------LLWLGCLVA 202
Cdd:CHL00011 151 LLSMWGGK-KRLYSATKFILYTAGGSIFLL---------IGVLGMGLYGSNEPTLNFeTLANQsypvaleiLFYIGFLIA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 203 FMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIE--FSYPFIILALWGVLMTGLICTRQTD 280
Cdd:CHL00011 221 YAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHsiFSPWLVIVGAIQIIYAASTSLGQRN 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 53686442 281 LKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERThsRTMLL 343
Cdd:CHL00011 301 LKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYL 361
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-409 |
9.47e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 138.69 E-value: 9.47e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQnhlktnPQS-RQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIIT 134
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 135 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMFLMNPTNkLLWLGCLVAFMVKMPLYGAHL 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 215 WLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPL--IEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDahAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTT 372
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 53686442 373 NLWGELTIMVSLFN----WSPWTILITGL---GTLITAAYTLYM 409
Cdd:PRK02546 395 GFVAELMVFVGFATsdayTLPFRVVVVFLaavGVILTPIYLLSM 438
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
56-328 |
4.09e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 122.13 E-value: 4.09e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQNHLKtnpqsRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMFLMNpTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIeFSYPFIILALWG---VLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQT-WSLVAPGLAIIGtisVIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270
....*....|....*....|....*....|....*.
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCL 328
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.18e-23 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 95.28 E-value: 1.18e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 1 MLKIIISTTMLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMIT-TNKYLGVDKISSPLLVLTCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSnLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 53686442 80 SQNHLKTNPQSRQQMYISMLATLQVALIMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-405 |
3.16e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 93.02 E-value: 3.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 56 LGVDKISSPLLVLTCWLLPLMILASQnhlkTNPQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITR 135
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 136 WGNQtERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTihqEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA---GALAENPTVVTAFGFVLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILAAVLLKLGGYGIIRITM-MFTPLIEFS----YPFIILALWGVLMTGLICTRQTDLKSLIAYSSI 290
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtVFGGDFRFAlglgWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 291 SHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPP 370
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350
....*....|....*....|....*....|....*.
gi 53686442 371 TTNLWGELTIMVSLFN-WSPWTILITGLGTLITAAY 405
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-443 |
9.28e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 88.49 E-value: 9.28e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 58 VDKISSPLLVLTCWLLPLMILASQNHLKTnpQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEH--ESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 138 NQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLT--IHQEMFL--MNPTNKLLWLG------CLVAFMVKM 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSakIRGLSFPltGGLAGNPPLALgvalalALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 208 PLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRI-------TMMFTPLIE-FSYPFIILALWGVLMTGLICTRQT 279
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAaLSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 280 DLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWL 359
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 360 LSNLSNMALPPTTNLWGELTIMVSLFNWSPWT-ILITGLGTLITAAYTLYMFLITQRGQLPNHLKltlpTHTREHSLMTM 438
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLpALVLLIASAISLVGYFRAWYSLFFGKPKSGEE----VEHKESPSMSV 473
|
....*
gi 53686442 439 HLLPM 443
Cdd:PRK12667 474 VILVL 478
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
200-447 |
3.20e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 86.91 E-value: 3.20e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYP---FIILALWGVLMTGLICT 276
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPgrlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 277 RQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTT 356
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 357 WWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWT---ILITGLGTLITAaytlyMFLITQRGQLPNHlkltlPTHTREH 433
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLiaiLLLLLLTLAFAA-----LVRRVAGMVFGEP-----PEAVNRG 450
|
250
....*....|....
gi 53686442 434 SLMTMHLLPMFLMM 447
Cdd:PRK06458 451 DLGWLTTSPMFVHL 464
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
200-412 |
9.54e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.87 E-value: 9.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWGVLMTGLIC---T 276
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAfsmL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 277 RQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTT 356
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAW 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 53686442 357 WWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITgLGTLITAAYTLYMFLI 412
Cdd:PRK08676 373 GVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLL 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
200-326 |
2.88e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 71.95 E-value: 2.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMV-KMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYG------IIRITMMFTPLIEFS------YPFIILALW 266
Cdd:PRK08668 202 LLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfllvlyVLPGTKLFSEFGTYRgvplfnYILAWLGNI 281
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 267 GVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALF 326
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
213-407 |
3.97e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 71.61 E-value: 3.97e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISH 292
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQ 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 293 MGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTT 372
Cdd:PRK12650 308 LGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLF 387
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 53686442 373 NLW---GELTIMVS--LFNWSPWTILIT-GLGTLITAAYTL 407
Cdd:PRK12650 388 GFVskeGMLTAFLEapGGNAGVVLLLVGaALGAVFTFAYSA 428
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-408 |
3.86e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.05 E-value: 3.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 89 QSRQQMYISM-LATLQVALIMAFSSTELTLFYITFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLFL 167
Cdd:PRK07234 89 ESAKTRFFYAqLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLV 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 168 LTSLNSLSM-NLLTIHQEMFlmnptnKLLWLGclvaFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRI 246
Cdd:PRK07234 168 YQANGTFAFsGLATADPEAF------ALIALG----LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 247 TMMftplieFSYPFIILALWGV---LMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIqtpwsftgATILMISHGLISS 323
Cdd:PRK07234 238 ALD------VPGLDLIVRIFGVgtaLLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 324 ALFCLANTNYERTHS--RTMLLARGlqttlplLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTLI 401
Cdd:PRK07234 304 TLFLCAGALPSRNFTelISQMLGIG-------KWIPLTMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAA 376
|
....*..
gi 53686442 402 TAAYTLY 408
Cdd:PRK07234 377 SFWKFIF 383
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
107-394 |
6.98e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.87 E-value: 6.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 107 IMAFSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLltSLNSLSMNLLTIHQEMF 186
Cdd:MTH00062 85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYL--SLVNGSFNFSDWGSDDS 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 187 LMNPTNKLLWLgclvAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALW 266
Cdd:MTH00062 163 VSLIVYYVLSF----MFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFS 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 267 GVLMtgLICTRQTDLKSLIAYSSISHMgLVVAAALIQTPWSFTG-ATILMISHGLISSALFCLANTNYERTHSRTMLLAR 345
Cdd:MTH00062 239 VFFL--ITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLK 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 53686442 346 GLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILI 394
Cdd:MTH00062 316 SGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-329 |
1.34e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 66.30 E-value: 1.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 190 PTNKLLWLGCL---VAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRI-------TMMFTPLiEFSYP 259
Cdd:PRK12662 203 PTNRAIQIGVLfimVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTL-PFNNV 281
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 260 FIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLA 329
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
175-405 |
2.89e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.17 E-value: 2.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 175 SMNLLTIHQEMFLMNPTNKLLWLGCLV-AFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPL 253
Cdd:PRK08377 187 TLNMAHIAQLAGTIDPTVAQVGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNA 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 254 IEFS---YPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLAN 330
Cdd:PRK08377 267 NGWSsvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVG 346
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 53686442 331 TNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWS-PWTILITGLGTLITAAY 405
Cdd:PRK08377 347 YVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGyTWPVALVLGASVVEAVY 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
207-341 |
6.98e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.52 E-value: 6.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 207 MPLygaHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWGV--LMTGLICTRQTDLKSL 284
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAIsaVLGVLYALAEHDLKRL 303
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 53686442 285 IAYSSISHMGLV----------------VAAALiqtpwSFTGATILMISHGLISSALFCLANTNYERTHSRTM 341
Cdd:PRK06521 304 LAYSTIENIGIIfvglglamvfiaygmpLLAAL-----ALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDM 371
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-412 |
8.50e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 63.68 E-value: 8.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 101 TLQVALIMAFSSTELTLFyITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMnllt 180
Cdd:PRK06589 125 TILIGVLIALSSDLFTMF-VCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF---- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 181 IHQEMFLMNPTNKLLWLgcLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMM------FTPLI 254
Cdd:PRK06589 200 VSGGLFSKNQSIILLLM--FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifglsyLQRIF 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 255 EFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYE 334
Cdd:PRK06589 278 AEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 335 RTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWS-PWTILITGLGTLITAAY-TLYMFLI 412
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLKI 437
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-400 |
8.86e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.17 E-value: 8.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRitmmFTPLIEFSYP-FIILALWGV---LMTGLICTRQTDLKSLIAY 287
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLwQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 288 SSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMA 367
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 53686442 368 LPPTTNLWGELTIMVSLFNWSPWTILITGLGTL 400
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
194-385 |
2.83e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 62.44 E-value: 2.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 194 LLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITM-MFTPLIEFSYPFIILALWGVLMTG 272
Cdd:PRK08667 206 LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMdVLSPELWWGVLILLAGSISALLGV 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 273 LICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILM-----------ISHGLISSALFCLANTNYERTHSRTM 341
Cdd:PRK08667 286 IYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNI 365
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 53686442 342 LLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLF 385
Cdd:PRK08667 366 EKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
213-413 |
2.56e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.40 E-value: 2.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSIS 291
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 292 HMGLVVAAALIQtpwSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPT 371
Cdd:COG1009 310 QLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPF 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 53686442 372 TNLWGELTIMVSLF---NWSPWTILITGLGTLITAAYTLYMFLIT 413
Cdd:COG1009 387 AGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-326 |
2.83e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.21 E-value: 2.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 108 MAFSSTELTLFYITFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIHQEMfL 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDE-L 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 188 MNPTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWG 267
Cdd:PRK12665 204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLT 283
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 53686442 268 VLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALF 326
Cdd:PRK12665 284 MVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
200-336 |
2.34e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 56.11 E-value: 2.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRI-TMMFTPLIEFSYPFI-ILALWGVLMTGLICTR 277
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLIlILALLTIIFGVIGAVA 295
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 53686442 278 QTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLANTNYERT 336
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKIT 354
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
190-397 |
5.79e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 55.22 E-value: 5.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 190 PTNKLLWLGCLVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMM-FTPLIEFSYPFIILALWGV 268
Cdd:PRK08042 177 PLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLgGNAPLWWGVALLVLGMITA 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 269 LMTGLICTRQTDLKSLIAYSSISHMGL--------VVAAALIQTPW---SFTGATILMISHGLISSALFCLANTNYERTH 337
Cdd:PRK08042 257 FVGGLYALMEHNIQRLLAYHTLENIGIillglgagVTGIALEQPALialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTG 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 338 SRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGL 397
Cdd:PRK08042 337 HRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARL 396
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-326 |
1.14e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 53.97 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 10 MLIPTVWLSSAKWMWFNSTINSLIIAIISLNLLLQPLELMITTNKYLgVDKISSPLLVLTCWLLPLMILASQNHLKTNPQ 89
Cdd:COG1007 21 LLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFV-VDGFALFFKLLILLAALLVLLLSRDYLERRGL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 90 SRQQMYISMLATLQVALIMAfSSTELTLFYITFEATLIPTLIIITRWGNQTERLNAGT-YF---------------LFYT 153
Cdd:COG1007 100 LRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllgalssgfllygisLLYG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 154 LAGSlpllvallflltslnslsMNLLTIHQEMFLMNPTNKLLWLGC---LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMI 230
Cdd:COG1007 179 ATGS------------------LNLAGIAAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 231 LAAVLlKLGGYGI-IRITMMFTPLIEFSYPFIILALWGVLMTG--LICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWS 307
Cdd:COG1007 241 LATAP-KIAAFAAlLRLLVEAFPGLAADWQLLLAVLAVLSMTVgnLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLG 319
|
330
....*....|....*....
gi 53686442 308 FTGATILMISHGLISSALF 326
Cdd:COG1007 320 VSAALFYLLAYLFMNLGAF 338
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-326 |
5.15e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.23 E-value: 5.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRITMMFTPLIEFSYPFIILALWGVLMTGLICTRQTDLKSLIAYSSIS 291
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVS 301
|
90 100 110
....*....|....*....|....*....|....*
gi 53686442 292 HMGLVVAAALIQTPWSFTGATILMISHGLISSALF 326
Cdd:PRK12644 302 QLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
200-329 |
6.87e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 6.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGAHLWLPKAHVEA--PVAGsmiLAAVLLKLGGYGIIRI-TMMFTPLIEFSYPFIILALW-GVLMT---- 271
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLpGGLATlafg 293
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 272 --GLICTRqtDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCLA 329
Cdd:PRK12666 294 aiGVLAAQ--RLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
91-457 |
3.49e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 3.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 91 RQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLFLLTS 170
Cdd:PRK12663 106 RRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 171 LNSLSMNLLTIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGAHlWLPKAHVEAPVAGSMILAAVLLKLGGYGIIRI-TMM 249
Cdd:PRK12663 185 FGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 250 FTPLIEFSYPFIILALWGVLMTGLI-CTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALFCL 328
Cdd:PRK12663 264 FPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 329 ANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTLITAAYTLY 408
Cdd:PRK12663 344 AGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLF 423
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 53686442 409 -MFLITQRGQLPNHLKLTLPTHTREHSLMTMHLLPMFLMMMKPEILSGFS 457
Cdd:PRK12663 424 rIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNLT 473
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
175-407 |
6.01e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 48.41 E-value: 6.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 175 SMNLLTIHQEMFLMNPTNKLLWLGC---LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLlKLGGYGIIrITMMFT 251
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLNISLLLLGIvliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVF-LRLFLY 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 252 PLIEFSYPFI----ILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALF- 326
Cdd:TIGR01770 260 ILFGFSEAWQiflaIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFg 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 327 CLANT-NYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITG-LGTLITAA 404
Cdd:TIGR01770 340 VLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAF 419
|
...
gi 53686442 405 YTL 407
Cdd:TIGR01770 420 YYL 422
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
175-326 |
1.62e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.12 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 175 SMNLLTIHQEMFLMNPTNKLLWLGC---LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLlKLGGYGII-RITMM- 249
Cdd:PRK05777 183 SLSFAGIAKALADGSGNSLLLLFGLvflLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVa 261
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 53686442 250 FTPLIEFSYP-FIILALWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLISSALF 326
Cdd:PRK05777 262 FGGLSEDWQQvLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-406 |
2.86e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 46.24 E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 58 VDKISSPLLVLTCWLLPLMILASQNHLKTnpQSRQQMYISMLATLQVALIMAFSSTELTLFYITFEATLIPTLIIITRWG 137
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKH--DTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 138 NQTERLNAGTYFLFYTLAGSLPLLVALLFLLTSLNSLSMNLLTIhqeMFLMNPT--NKLLWLGCLVAFMVKMPLYGAHLW 215
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAV---KMSENPTvvAKIALALFIAGLAMKSGAVPVHMW 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 216 LPKAHVEAPVAGSMILaaVLLKLGG-YGIIRITM-MFTPLIEFS---YPFIILALWGVLMTGLICTRQTDLKSLIAYSSI 290
Cdd:PRK08376 243 LPDAYPAAPSSISAML--LVIKQAGlYALARVLFsIYGPAINLAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 291 SH-----MGLVVAAALIQTPWS-------FTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWW 358
Cdd:PRK08376 321 SQigymlLGLGVGLAALGDPAMasygeiaLAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAF 400
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 53686442 359 LLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGT-LITAAYT 406
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFV 449
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
213-298 |
7.31e-05 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 45.30 E-value: 7.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 213 HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRitmmFTPLIEFSYPFIilalWGVLMTGLI--------CTRQTDLKS 283
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWF----WTVTLVGLItlfwgslnAVKQTDLKG 300
|
90
....*....|....*
gi 53686442 284 LIAYSSISHMGLVVA 298
Cdd:PRK12645 301 ILAFSTVSQLGLIMS 315
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
200-298 |
8.02e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.13 E-value: 8.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGA---------HLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRitmmFTPLIEFS----YPFIILAL 265
Cdd:PRK12646 208 LFIPMIFMFLLGAftksaqfpfHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFR----FTPLLGLSnmyiYIVTFVGL 282
|
90 100 110
....*....|....*....|....*....|...
gi 53686442 266 WGVLMTGLICTRQTDLKSLIAYSSISHMGLVVA 298
Cdd:PRK12646 283 ITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-407 |
9.84e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.82 E-value: 9.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 75 LMILASQNHLKTNPQSRQQMYISMLATLQVALIMAFSSTELTLFyITFEATLIPTLIIITRWGNQTERLNAGTYFLFYTL 154
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 155 AGSLPLLVALLFLLTSLNSLSMNLLtIHQEMFLMNPTNKLLWLGCLVAFMVKMPLYGA----HLWLPKAhVEAPVAGSMI 230
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATI-LQDSELIENIKGHPLFLITLILIFIGAAAKSAqgpfYIWLPNA-MEAPTPVSAF 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 231 L-AAVLLKLGGYGIIRITMMFTPLIEFsypFIILALWGV---LMTGLICTRQTDLKSLIAYSSISHMGLVVAAALIQTP- 305
Cdd:PRK12649 251 LhSATMVKAGVYLVARIHPIFSGTEAW---FILVSGTGMitmVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYh 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 306 ---WSFTGATILMISHGLISSALFCLANTNYERTHSRTMLLARGLQTTLPLLTTWWLLSNLSNMALPP-----TTNLWGE 377
Cdd:PRK12649 328 epgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPlngflSKEMFYE 407
|
330 340 350
....*....|....*....|....*....|...
gi 53686442 378 LTIMVSLFNWSPWTILITG---LGTLITAAYTL 407
Cdd:PRK12649 408 TSVEMGALIGGPFTIIIPAvavLGGVFTFAYSI 440
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
188-400 |
2.03e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.42 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 188 MNPTNKLL-WLGCLVAFMVKMPLYGAHLWLPKAhVEAPVAGSMIL-AAVLLKLGGYGIIRITMMFTPL-IEFSYPFIILA 264
Cdd:PRK06525 201 LHGSLKYLvFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIpHVIGYVGAVMA 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 265 LWGVLMTGLICTRQTDLKSLIAYSSISHMGLVVAA---ALIQTPWSFTGATILMISHGLISSALFCLANTNYERTHSRTM 341
Cdd:PRK06525 280 IVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGlslAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLL 359
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 53686442 342 LLARGLQTTLPLLTTWWLLSNLSNMALPPTTNLWGELTIMVSLFNWSPWTILITGLGTL 400
Cdd:PRK06525 360 PRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
203-326 |
2.31e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 203 FMVKMPLYGAHL--WLPKAHVEAPVAGSMILAAVLLKLGGYGIIRITMM--FTPLIEFSYPFIILALWGVLMTGLICTRQ 278
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILtqTIPIGYFGLTILAIGAFSILFGALYAYVS 247
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 53686442 279 TDLKSLIAYSSISHMGLVVAA--------ALIQTPWSFTGATILM--ISHGLISSALF 326
Cdd:PRK06459 248 ENVKGLLAFSTIENNGAILVAlglymvtkQLITSIEHFSLITVILysFAHSVAKTGLF 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
200-412 |
2.77e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.95 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 200 LVAFMVKMPLYGAHLWLPKAHVEAPVAGSMILAAVLlKLGgygIIRITMMFTPLIEFSYPFIILALWGVLMTGLICTRQT 279
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQT 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 280 DLKSLIAYSSISHMGLVVAAALIQTPWSFTGATILMISHGLIssaLFCLANTNYERTHSRTMLLARGLQTTLPLLTTwwl 359
Cdd:MTH00144 167 QVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDSGSMKDLGSLKPSYKTGLSIISLL--- 240
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 53686442 360 lsnLSNMALPPTTNLWGELTIMVSLFNWSPW-TILITGLGTLITAAYTLYMFLI 412
Cdd:MTH00144 241 ---LSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFS 291
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
185-299 |
5.33e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.37 E-value: 5.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 185 MFLMNPTNKLLWLgCLVAF---MVKMPLYGAHLWLPKAhVEAPVAGS-MILAAVLLKLGGYGIIRITmmftPLIEFS-YP 259
Cdd:MTH00020 200 MVVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PLFEQApLA 273
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 53686442 260 FIILALWGVL---MTGLICTRQTDLKSLIAYSSISHMGLVVAA 299
Cdd:MTH00020 274 LIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
199-297 |
4.60e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 4.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 53686442 199 CLV-AFMVKMPLYGAHLWLPKAhVEAPVAGSMILAAVLLKLGGYGIIRitmmFTPLIEFSYPFI-ILALWGVLMT---GL 273
Cdd:PRK08168 205 LLVlAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIR----FAPLLEQAPPARwLLVLVGLATAvlaGL 279
|
90 100
....*....|....*....|....
gi 53686442 274 ICTRQTDLKSLIAYSSISHMGLVV 297
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGFML 303
|
|
| |
