|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
7.99e-152 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 430.42 E-value: 7.99e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQFQQT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 529217294 321 KQTFLLPMLTTLATLTLPLSPALLTLN 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
9.03e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 89.79 E-value: 9.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 8 LIMLTIFTGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMF----------SIVI 76
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgSLNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 77 SAVnsGQWGITNMHNQLMSL----MIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPN 152
Cdd:COG1007 186 AGI--AAALAAGGANSPLLLlglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 153 ILLLIAILSIL-------VGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSL----TMLNLLIYLMLTVALFSMLNI 221
Cdd:COG1007 264 LAADWQLLLAVlavlsmtVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 222 -----NVNTTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRL 296
Cdd:COG1007 344 lsrkgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 529217294 297 IY 298
Cdd:COG1007 424 VK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-281 |
4.49e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 85.83 E-value: 4.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 23 SSHWLLMWIGLEINMLAIIP-ILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQWGITNMHNQ--------- 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 93 --LMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLL-TWQKLAPISI-----LLQMYSSMNPNILLLIAILSILV 164
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 165 GGWGGLNQTQLRKILAYSSIAHMGWMMAILM----YCPSLTMLNLLIYLMLTVALFSM-LNINVNTT----MLALSNMWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCaGSVIYRRVhtrnIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 529217294 236 KTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATT 281
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-297 |
2.07e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 82.69 E-value: 2.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 6 LVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 85 GITNMHNQLMSLM------------IMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMY------ 146
Cdd:TIGR01770 184 NFEDLLLFLSNGMlnisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFlyilfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 147 -SSMNPNILLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMyCPSL-----TMLNLLIYLMLTVALFSML- 219
Cdd:TIGR01770 264 fSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLL-AGTLegikaVLFYIFIYALMSLGAFGVLs 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 220 -----NINVNTTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYM 294
Cdd:TIGR01770 343 llrsyKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYL 422
|
...
gi 529217294 295 RLI 297
Cdd:TIGR01770 423 RVV 425
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
7.99e-152 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 430.42 E-value: 7.99e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQFQQT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 529217294 321 KQTFLLPMLTTLATLTLPLSPALLTLN 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.89e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 326.38 E-value: 7.89e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMySSMNPNILLLIAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQI-APTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQFQQT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 529217294 321 KQTFLLPMLTTLATLTLPLSPALLTL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
7.09e-103 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 306.36 E-value: 7.09e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQFQQT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
...
gi 529217294 321 KQT 323
Cdd:MTH00112 321 KNT 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
4.09e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 299.14 E-value: 4.09e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQF 317
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRF 317
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
1.59e-75 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 236.40 E-value: 1.59e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKW 315
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSW 315
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-307 |
4.37e-73 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 230.20 E-value: 4.37e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPT 307
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-314 |
1.44e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 155.75 E-value: 1.44e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SgqwgitNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISIllqMYSSMNPNILLLIAIL 160
Cdd:MTH00160 82 L------MLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLIL---LSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 529217294 241 IFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMK 314
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK 306
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
3.35e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 154.66 E-value: 3.35e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVN 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 81 SGQWgitnmhnqLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIA-I 159
Cdd:MTH00144 81 SFSW--------FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVIsV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 160 LSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMwNKTPA 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 529217294 240 IIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKW 315
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
6-312 |
2.60e-41 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 147.23 E-value: 2.60e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 6 LVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISavnsgqWG 85
Cdd:MTH00011 8 MFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMM------WS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 86 ITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAILSILVG 165
Cdd:MTH00011 82 FPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 166 GWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAIIFMIL 245
Cdd:MTH00011 162 GLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLF 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217294 246 ISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYStSLTMFPTLNNTK 312
Cdd:MTH00011 242 IMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN-FMYLSPTFSSLK 307
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-300 |
8.10e-35 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 129.79 E-value: 8.10e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 8 LIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNsgqwgit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSN------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 88 NMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILlqMYSSMNPNILLLIAILSILVGGW 167
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 168 GGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYLMLTVALFSMLNINVNTTMLALSNMWNKTPAIIFMILIS 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 529217294 248 LLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYST 300
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
9.03e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 89.79 E-value: 9.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 8 LIMLTIFTGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMF----------SIVI 76
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgSLNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 77 SAVnsGQWGITNMHNQLMSL----MIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPN 152
Cdd:COG1007 186 AGI--AAALAAGGANSPLLLlglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 153 ILLLIAILSIL-------VGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSL----TMLNLLIYLMLTVALFSMLNI 221
Cdd:COG1007 264 LAADWQLLLAVlavlsmtVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 222 -----NVNTTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRL 296
Cdd:COG1007 344 lsrkgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 529217294 297 IY 298
Cdd:COG1007 424 VK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-281 |
4.49e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 85.83 E-value: 4.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 23 SSHWLLMWIGLEINMLAIIP-ILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQWGITNMHNQ--------- 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 93 --LMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLL-TWQKLAPISI-----LLQMYSSMNPNILLLIAILSILV 164
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 165 GGWGGLNQTQLRKILAYSSIAHMGWMMAILM----YCPSLTMLNLLIYLMLTVALFSM-LNINVNTT----MLALSNMWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCaGSVIYRRVhtrnIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 529217294 236 KTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATT 281
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-297 |
2.44e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 84.70 E-value: 2.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 16 GTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMFSIV-------------ISAVNS 81
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 82 GQWGITNMHNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMysSMNPNILLLIAILS 161
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 162 ILVGGWGGLNQTQLRKILAYSSIAHMGWMM------------AILMYcpsltmlnLLIYLMLTVALFSM-LNINVNTTML 228
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLwgieigsfesiqASLVY--------LFIYIIMSICVFSIiLALNVYKNLI 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 229 A-LSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLI 297
Cdd:MTH00196 235 IeFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
5.23e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 84.68 E-value: 5.23e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 8 LIMLTIFTGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQWGI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 87 TNMHNQLMS----LMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNpnILLLIAILSI 162
Cdd:MTH00199 181 QGINSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMM------------AILMYcpsltmlnLLIYLMLTVALFSMLnINVNTT---M 227
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILfgvaigsfesiqASLIY--------MIIYVIMSICSFSII-LSLKLTkglI 329
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217294 228 LALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIY 298
Cdd:MTH00199 330 VEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ 400
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-297 |
2.07e-17 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 82.69 E-value: 2.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 6 LVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQW 84
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 85 GITNMHNQLMSLM------------IMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMY------ 146
Cdd:TIGR01770 184 NFEDLLLFLSNGMlnisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFlyilfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 147 -SSMNPNILLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMyCPSL-----TMLNLLIYLMLTVALFSML- 219
Cdd:TIGR01770 264 fSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLL-AGTLegikaVLFYIFIYALMSLGAFGVLs 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 220 -----NINVNTTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYM 294
Cdd:TIGR01770 343 llrsyKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYL 422
|
...
gi 529217294 295 RLI 297
Cdd:TIGR01770 423 RVV 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-297 |
2.52e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 79.48 E-value: 2.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 1 MKPIILVLIMLTIFtGTMLTMISSHWLLMWIGLEINMLAI-IPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAV 79
Cdd:PRK05777 101 GRGEFYLLVLFALL-GMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYG 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 80 NSGQWGITNMHNQLMS------------LMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYS 147
Cdd:PRK05777 180 ATGSLSFAGIAKALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 148 SMNPNILLLIAILSI-------LVGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSL----TMLNLLIYLMLTVALF 216
Cdd:PRK05777 260 VAFGGLSEDWQQVLAiiaiasmLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAF 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 217 SMLNINVN-----TTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLY 291
Cdd:PRK05777 340 GVISLLRRkggeaESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAF 419
|
....*.
gi 529217294 292 FYMRLI 297
Cdd:PRK05777 420 YYLRVI 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-301 |
5.17e-10 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 60.16 E-value: 5.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 10 MLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNSGQWGITNM 89
Cdd:COG0651 113 FLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 90 HNQLMSL----------MIMAALTMKLGMTPFHFWVPEV-----TQGISLMSGMLLltwqKLApISILLQMYSSMNPNIL 154
Cdd:COG0651 193 AARLAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAypaapSPVSALLSGLLT----KVG-VYAILRVLTLLFGADP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 155 LLIAILSIL--------VGGWGGLNQTQLRKILAYSSIAHMGWMMAILMYCPSLTMLNLLIYL----MLTVALF----SM 218
Cdd:COG0651 268 ALFLGTLLLvlglltmlVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFlaagAI 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 219 LNINVNTTMLALSNMWNKTPAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIY 298
Cdd:COG0651 348 ERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFG 427
|
...
gi 529217294 299 STS 301
Cdd:COG0651 428 RAQ 430
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-219 |
1.72e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 59.10 E-value: 1.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 9 IMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSM---------EAATKYFLTQATASMLLMFSIVISAV 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 80 NSGQWGI-----------TNM---HNQLMSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQM 145
Cdd:MTH00198 273 FTGNEGMlgtilsatletTNIelrQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 146 YssMNPNILLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWmmaILMYCPSLTMLNL-------LIYLMLTVALFSM 218
Cdd:MTH00198 353 V--ITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGF---ILIGVSAGTYESLqaswtyaVTYLVSALASFTV 427
|
.
gi 529217294 219 L 219
Cdd:MTH00198 428 I 428
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
9-217 |
6.03e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 50.82 E-value: 6.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 9 IMLTIFTGTMLTMISSHWLLMWIGLEinMLAIIPILMK---KINPRSMEAATKYFLTQATASMLLMFSI-VISAVNSGQW 84
Cdd:PRK02504 115 ILLTATLGGMFLSGATELVMIFISLE--TLSIASYLLTgymKRDPRSNEAALKYLLIGAASSAIFLYGSsLLYGLSGGST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 85 GITNMHNQLMS----------LMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLA----PISILLQMYSSMN 150
Cdd:PRK02504 193 QLSAIALALITspslglalalVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFD 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 529217294 151 PN---ILLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMaILMYCP-----SLTMLNLLIYLMLTVALFS 217
Cdd:PRK02504 273 EQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM-IGLVAGteagyASMVFYLLAYLFMNLGAFA 346
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-192 |
3.84e-06 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 48.54 E-value: 3.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 50 PRSMEAATKYFLTQATASMLLMFSIVISAVNSGQW--GITNMHNQLMS--------LMIMAALTMKLGMTPFHFWVPEV- 118
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqlllfLAFFIAFAVKVPMFPFHTWLPDAh 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 119 ----TQGISLMSGMLL----------------LTWQKLAPISILLQMYSsmnpnillliailsILVGGWGGLNQTQLRKI 178
Cdd:COG1008 237 veapTAGSVLLAGVLLkmggygllrfalplfpEASAYFAPLLAALGVIG--------------IIYGALVALAQTDLKRL 302
|
170
....*....|....
gi 529217294 179 LAYSSIAHMGWMMA 192
Cdd:COG1008 303 IAYSSVSHMGFVLL 316
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-191 |
1.39e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 46.47 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 4 IILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKkinPRSMEAATKYFLTQATASMLLMFSIV-ISAVNSG 82
Cdd:TIGR01972 109 YALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG---PNRIYAAMKFFLYTLAGSLLMLLAILgLYFLGGG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 83 QWGITNMHNQLMS--------LMIMAALTMKLGMTPFHFWVPEV-----TQGISLMSGMLLltwqKLAP---ISILLQMY 146
Cdd:TIGR01972 186 TFDLLELLNLPLPfgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTygfLRFNLPLF 261
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 529217294 147 ---SSMNPNILLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMM 191
Cdd:TIGR01972 262 pdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-323 |
1.44e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.86 E-value: 1.44e-05
10 20 30
....*....|....*....|....*....|...
gi 529217294 291 YFYMRLIYSTSLTMFPTLNNTKMKWQFQQTKQT 323
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNT 33
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
8-192 |
1.71e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.41 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 8 LIMlTIFTGTMLTMI-SSHWLLMWIGLEINMLAIIpILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAvnsGQWGI 86
Cdd:PRK12650 114 LLM-TAFMAAMLLLVlADDVVVLFVAWELVSLASF-FLIARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAA---TQTGT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 87 TNMHNQLMS---------------LMIMAALTmKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNP 151
Cdd:PRK12650 189 TSLSGILHSdvwaekpglttvvavLIAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD 267
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 529217294 152 NIL-----LLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMMA 192
Cdd:PRK12650 268 VAVwnwllIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVA 313
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-191 |
4.09e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 38.92 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 10 MLTIFTGTMLTMISSHWLL-MWIGLEINMLAIIPILMKKIN-PRSMEAATKYFLTQATASMLLMFSIvisAVNSGQWGIT 87
Cdd:PRK08376 126 LILLLELGMLGMAITGDLFnFFVFLEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 88 NMH-------------NQLMSLMIMAALTMKLGMTPFHFWVPEV-TQGISLMSGMLLLTWQK--LAPISILLQMYS-SMN 150
Cdd:PRK08376 203 NMAylavkmsenptvvAKIALALFIAGLAMKSGAVPVHMWLPDAyPAAPSSISAMLLVIKQAglYALARVLFSIYGpAIN 282
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 529217294 151 PNI----LLLIAILSILVGGWGGLNQTQLRKILAYSSIAHMGWMM 191
Cdd:PRK08376 283 LATvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYML 327
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-299 |
6.51e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 38.41 E-value: 6.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 50 PRSMEAATKYFLTQATASMLLMFSIVI-------------SAVNSGQWGITNMH---NQLMSLMIMAAL-----TMKLGM 108
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlSAKIRGLSFPLTGGlagNPPLALGVALALalwafTIKAAI 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 109 TPFHFWVPEV-TQGISLMSGMLLLTWQKLAPISILLQMY-----SSMNPNILLLIAILSILVGGWGGL-------NQTQL 175
Cdd:PRK12667 240 FPNHFWLPDAhPAAPSPVSAMLSGLVVNVGAYAIIRFLYtifgiSPSLIDFRAALSPILIILGAVSAIigalmmvVQKDV 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 176 RKILAYSSIAHMGW-MMAIlmycpsltmlNLLIYLMLTVALFSMLNINVNTTMLALSN-----------------MWNKT 237
Cdd:PRK12667 320 KRLLAYSTISHMGYiFMGI----------GIGTQLGLAAALFHIINHAIAKSLLFLASgvfihaagtrdidelagLGRKM 389
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217294 238 PAIIFMILISLLSLGGLPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYS 299
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-191 |
6.62e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.09 E-value: 6.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 2 KPIILVLIMLTIFTGTMLTMISSHWLLMWIGLEINMLAIIPILMKKINPRSMEAATKYFLTQATASMLLMFSIVISAVNS 81
Cdd:PRK12561 85 KPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 82 GQ--WGITNMHNQ--------LMSLMIMAALTMKLGMTPFHFWVP----EVTQGISLMSGMLLLTWQKLAPISILLQMYs 147
Cdd:PRK12561 165 DTftFDLAELGAKsyplalelLLYAGFLIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYALIRFNVQML- 243
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 529217294 148 smnPNILLLIAILSILVGG----WGGLN---QTQLRKILAYSSIAHMGWMM 191
Cdd:PRK12561 244 ---PDAHVYFAPALAILGVvniiYGALNafaQDNVKRRLAYSSVSHMGFVL 291
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-191 |
6.65e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 38.06 E-value: 6.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 51 RSMEAATKYFLTQATASMLLMFSIVISAVNSGQ----WGI------TNMHNQLMSLM----IMAALTMKLGMTPFHFWVP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGGeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 117 EVTQG-----------ISLMSGMLLLT-------------WQKLAPISILLQMyssmnpnillliailsiLVGGWGGLNQ 172
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALATrifdipfyfssneWHLLLEILAILSM-----------------ILGNLIAITQ 301
|
170
....*....|....*....
gi 529217294 173 TQLRKILAYSSIAHMGWMM 191
Cdd:CHL00049 302 TSMKRMLAYSSIGQIGYVI 320
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-191 |
7.78e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 37.87 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 50 PRSMEAATKYFLTQATASMLLMFSI----VISAVNSGQWGITNMHNQLMS--------LMIMAALTMKLGMTPFHFWVPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIiylvVVYYNATGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 118 V-----TQGISLMSGMLLltwqKLAP---ISILLQMYssmnPNILLLIAILSILV-------GGWGGLNQTQLRKILAYS 182
Cdd:PRK05846 237 AhvqapTAGSVLLAGILL----KMGAyglLRFSLPLF----PDASHEFAPIIITLgviaiiyGALVALAQTDIKKLIAYS 308
|
....*....
gi 529217294 183 SIAHMGWMM 191
Cdd:PRK05846 309 SISHMGFVT 317
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
94-317 |
9.68e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.16 E-value: 9.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 94 MSLMIMAALTMKLGMTPFHFWVPEVTQGISLMSGMLLLTWQKLAPISILLQMYSSMNPNILLLIAILSILVggwgGLNQT 173
Cdd:MTH00091 59 FGYFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLK 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217294 174 QLRKILAYSSIAHMGWMMAILMYCpsltMLNLLIYLMLtvalfsmlninVNTTMLALSNMWNKTPAIIFMILISLLSLGG 253
Cdd:MTH00091 135 SYKNLLILSSTESFNWLILSFFFS----FFNVFFLFFY-----------YFLLMLFLIPKFNNVNKLNFVSWETLLVFMN 199
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 529217294 254 LPPLTGFLPKWVIIQELTKNSNILLATTMAIMALLNLYFYMRLIYSTSLTMFPTLNNTKMKWQF 317
Cdd:MTH00091 200 LPFSVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
| |
