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Conserved domains on  [gi|529217153|ref|YP_008378878|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Avahi laniger]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 561.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   1 MFMINLMLLIIPILLAMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  81 IALIMWTPMPLPYPLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 161 TLSTLITTQEFMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217153 241 LFLGTLYNPHAPQMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 561.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   1 MFMINLMLLIIPILLAMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  81 IALIMWTPMPLPYPLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 161 TLSTLITTQEFMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217153 241 LFLGTLYNPHAPQMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-305 4.17e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 324.43  E-value: 4.17e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   96 V--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  174 LIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQ 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLP 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217153  254 mYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 252 -GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.17e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.50  E-value: 2.17e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPL--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  94 PLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQE-FM 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 173 WLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217153 253 QMYST-----TFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 561.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   1 MFMINLMLLIIPILLAMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALS 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  81 IALIMWTPMPLPYPLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 161 TLSTLITTQEFMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 529217153 241 LFLGTLYNPHAPQMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQM 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 509.44  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00111 101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQMY 255
Cdd:MTH00111 181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQM 318
Cdd:MTH00111 261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 9.68e-177

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 491.44  E-value: 9.68e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00071 101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQMY 255
Cdd:MTH00071 181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQ 317
Cdd:MTH00071 261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 9.91e-175

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 486.42  E-value: 9.91e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00134 102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQMY 255
Cdd:MTH00134 182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPPQM 318
Cdd:MTH00134 262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 2.15e-140

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 399.35  E-value: 2.15e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00040 100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFL--GTLYNPHAPq 253
Cdd:MTH00040 180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLggGSPFNEIFP- 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 529217153 254 MYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPP 316
Cdd:MTH00040 259 INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 2.18e-139

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 396.59  E-value: 2.18e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00218  18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00218  98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNphapqmy 255
Cdd:MTH00218 178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPP 316
Cdd:MTH00218 251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-313 2.99e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 335.17  E-value: 2.99e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00195  18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00195  98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPhapqmy 255
Cdd:MTH00195 178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTI------ 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 529217153 256 stTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSS 313
Cdd:MTH00195 252 --IVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
16-305 4.17e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 324.43  E-value: 4.17e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   96 V--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  174 LIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQ 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPLP 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 529217153  254 mYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:pfam00146 252 -GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 1.06e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 323.36  E-value: 1.06e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:MTH00143  97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNphAPQMY 255
Cdd:MTH00143 177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSV--LFLLG 254

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
Cdd:MTH00143 255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-310 2.24e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 322.49  E-value: 2.24e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  18 AFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPLVN 97
Cdd:MTH00193  20 AFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLIS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  98 MNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLIIP 177
Cdd:MTH00193 100 FNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFF 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 178 SWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYnphapqmYST 257
Cdd:MTH00193 180 SFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDL-------LSL 252

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 529217153 258 TFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPIL 310
Cdd:MTH00193 253 LFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-307 1.22e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 310.81  E-value: 1.22e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153   1 MFMINLMLLIIPILLAMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALS 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  81 IALIMWTPMPLPYPLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 161 TLSTLITTQEFMWLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTT 240
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 529217153 241 LFLGTLYNphapqMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00225 242 LFFGGFFV-----TIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 1.02e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 308.97  E-value: 1.02e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 V--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMW 173
Cdd:MTH00054  98 VlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 174 LIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAPQ 253
Cdd:MTH00054 178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 529217153 254 MYSTT---FATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPP 316
Cdd:MTH00054 258 SYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 4.81e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 299.73  E-value: 4.81e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00216  22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 V--NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQ-EFM 172
Cdd:MTH00216 102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQnNGI 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 173 WLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAP 252
Cdd:MTH00216 182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY 261

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 529217153 253 -QMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPP 316
Cdd:MTH00216 262 fKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-299 2.17e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.50  E-value: 2.17e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPL--PY 93
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  94 PLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQE-FM 172
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 173 WLIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFLGTLYNPHAP 252
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217153 253 QMYST-----TFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 299
Cdd:COG1005  265 LPLGGlpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
18-303 2.47e-95

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 285.16  E-value: 2.47e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  18 AFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPL--PYPL 95
Cdd:PRK06076  28 AFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELVI 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLI 175
Cdd:PRK06076 108 ADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNI 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFL---GTLYNPHAP 252
Cdd:PRK06076 188 IPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLggwLPPFPLGGG 267

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 529217153 253 QMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMW 303
Cdd:PRK06076 268 IPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-311 5.90e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 268.57  E-value: 5.90e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00010  19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFmWLI 175
Cdd:MTH00010  99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS-WIL 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTLFlgtlynphAPQMY 255
Cdd:MTH00010 178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF--------TSFIP 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 529217153 256 STTFA-----TKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILS 311
Cdd:MTH00010 250 SIFISdlmliLKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 8.81e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 258.79  E-value: 8.81e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWT--PMPLPY 93
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAivTMDQGV 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  94 PLVNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMW 173
Cdd:MTH00029 103 FLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 174 LIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTT-------------- 239
Cdd:MTH00029 183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTifflggwlspldgi 262

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 529217153 240 --TLFLGTLYNPHAPQMYSTTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISLPILSSSIPP 316
Cdd:MTH00029 263 ptPPEAFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-307 3.25e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 191.27  E-value: 3.25e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  16 AMAFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPL 95
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  96 VNMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLStlittQEFMWLI 175
Cdd:MTH00090  92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV-----SSFSLSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 176 IpswPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIMMNVLTTTlflgtlynphapqMY 255
Cdd:MTH00090 167 F---VIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSV-------------LF 230

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 529217153 256 STTFATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYISL 307
Cdd:MTH00090 231 FKFSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-298 4.24e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.48  E-value: 4.24e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  18 AFLILIERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPLVN 97
Cdd:MTH00058  19 AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSY 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  98 MNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEFMWLIIP 177
Cdd:MTH00058  99 SSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLFP 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 178 swPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYtniIMMNVLTTTLFLGtlynphapqMYST 257
Cdd:MTH00058 179 --LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEY---LIIFIFSWLGSVL---------FFGG 244

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 529217153 258 TFATKALLLTTL-FLWVRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00058 245 GFVSIMLLFHLLfFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 23-298 5.01e-43

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 151.64  E-value: 5.01e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  23 IERKVLGYMQLRKGPNIVGPHGLLQPFADAMKLFIKEPLRPLTSSTMLYIMAPTLALSIALIMWTPMPLPYPLV--NMNM 100
Cdd:CHL00032  50 LEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSI 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 101 GILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSftLSTL-ITTQEFMWLIIpSW 179
Cdd:CHL00032 130 GVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS--LSTVdIVEAQSKYGFW-GW 206

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 180 PL------TMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIIM--------------MNVLTT 239
Cdd:CHL00032 207 NLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVsslfvtvlylggwnLSIPYI 286

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 529217153 240 TLFLGTLYNPhAPQMYSTT---FATkaLLLTTLFLWV----RASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:CHL00032 287 FIPELFEINK-TGGVFGTTigiFIT--LAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-305 2.66e-27

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 108.35  E-value: 2.66e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  19 FLILIERKVLGYMQLRKGPnivgphGLLQPFADAMKLFIKEPLRPLTSStMLYIMAPTLALSIALI--MWTPMPLPYPLV 96
Cdd:COG0650   20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLaaLLVPVLTTGPPL 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153  97 NMNMGILFMLATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQE---FMW 173
Cdd:COG0650   93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAahgPLL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529217153 174 LIIPSWPLTMMWFVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAeytniIMMNVLTTTLFLGTLYNPHAPQ 253
Cdd:COG0650  173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELA-----AALKLFVLLSLFVNLFLPWGIA 247

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 529217153 254 MYSTT----FATKALLLTTLFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCMWYI 305
Cdd:COG0650  248 LTLLLalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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