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Conserved domains on  [gi|528889266|gb|AGS47801|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Zonosagitta nagae]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009625)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 1.54e-28

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 99.59  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLM-- 78
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWsn 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 528889266  79 -----STMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00203  81 qlsslSLLLAFLFLILLTLGLIYEWLQGGLEW 112
 
Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 1.54e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 99.59  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLM-- 78
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWsn 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 528889266  79 -----STMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00203  81 qlsslSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
31-104 1.45e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.61  E-value: 1.45e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   31 DSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP--------MLMSTMLVTTFLVALVLGTVYEWGYGG 102
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwavsfrelGWFGFVEMLIFIAILLVGLVYAWKKGA 92


                  ..
gi 528889266  103 LN 104
Cdd:pfam00507  93 LE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-105 3.07e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 3.07e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   6 VYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP--------ML 77
Cdd:COG0838   10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwavvfrelGW 89

                         90       100
                 ....*....|....*....|....*...
gi 528889266  78 MSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:COG0838   90 FGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-105 1.54e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 99.59  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLM-- 78
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWsn 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 528889266  79 -----STMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00203  81 qlsslSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-105 2.74e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 93.91  E-value: 2.74e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   5 MVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM-------- 76
Cdd:MTH00069   3 MLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwasqlnt 82

                         90       100       110
                 ....*....|....*....|....*....|
gi 528889266  77 -LMSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00069  83 pTNTLFWSTLILILLTLGLIYEWIQGGLEW 112
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 9-105 8.90e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 92.67  E-value: 8.90e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM---------LMS 79
Cdd:MTH00136   9 TITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgdqlpspLLT 88

                         90       100
                 ....*....|....*....|....*.
gi 528889266  80 TMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00136  89 FFWATAVLILLTLGLIYEWLQGGLEW 114
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-105 3.98e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.07  E-value: 3.98e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALACLTYK-SIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLMS 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKrSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 528889266  80 TMLVTT---------FLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00148  81 LGSSFSvwsltslfiFLLILILGLFHEWNEGSLDW 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 9-105 7.91e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 89.94  E-value: 7.91e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM---------LMS 79
Cdd:MTH00113   8 TISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLpwainlttpTTT 87

                         90       100
                 ....*....|....*....|....*.
gi 528889266  80 TMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00113  88 LTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-105 6.72e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 87.52  E-value: 6.72e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   5 MVYGLISLLVATVLIALA-CLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM------- 76
Cdd:MTH00161   3 LIILLIILLISIILMILAsLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMififkts 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 528889266  77 --LMSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00161  83 nmMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-107 2.33e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 86.58  E-value: 2.33e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALAcltYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP----- 75
Cdd:MTH00202   5 LFMSILSILISSLLFLVSWMLS---FRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPlplvl 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 528889266  76 ---MLMSTML-VTTFLVALVLGTVYEWGYGGLNWLV 107
Cdd:MTH00202  82 kssWSKGGLLgGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 9-105 1.48e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 84.22  E-value: 1.48e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM-------LMSTM 81
Cdd:MTH00106   8 LTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasqtnNLNTM 87

                         90       100
                 ....*....|....*....|....*.
gi 528889266  82 LVTTFLV--ALVLGTVYEWGYGGLNW 105
Cdd:MTH00106  88 LTMALLLisLLALSLAYEWTQKGLEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-105 1.64e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 81.83  E-value: 1.64e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALA-CLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLM- 78
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAwVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTi 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 528889266  79 -----STMLVTT---FLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00012  81 lmtstSKTVVYTsilFLLILVIGLIHEWREGSLDW 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 9-105 4.90e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 80.41  E-value: 4.90e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLMSTMLV----- 83
Cdd:MTH00042   9 LIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITnpstl 88

                         90       100
                 ....*....|....*....|....*.
gi 528889266  84 ----TTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00042  89 lpisLIFLIILTIGLVYEWVNGGLEW 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
31-104 1.45e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 73.61  E-value: 1.45e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   31 DSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP--------MLMSTMLVTTFLVALVLGTVYEWGYGG 102
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwavsfrelGWFGFVEMLIFIAILLVGLVYAWKKGA 92


                  ..
gi 528889266  103 LN 104
Cdd:pfam00507  93 LE 94
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 9-105 1.38e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 71.66  E-value: 1.38e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM--------LMST 80
Cdd:MTH00055  13 LFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWcvvynqigLFGF 92

                         90       100
                 ....*....|....*....|....*
gi 528889266  81 MLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00055  93 WVMYLFLIILTIGLIYEWVKGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 6-105 3.07e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 3.07e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   6 VYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP--------ML 77
Cdd:COG0838   10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwavvfrelGW 89

                         90       100
                 ....*....|....*....|....*...
gi 528889266  78 MSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:COG0838   90 FGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-105 8.61e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 8.61e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGL-ISLLVATVLIALACLTYKSI-ADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM-- 76
Cdd:MTH00030   8 IFFSTLLGVgIILLLVSISFTLGNSRIGLTkPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWsi 87

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 528889266  77 ------LMSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00030  88 vfnqlnLFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-105 1.83e-15

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 66.43  E-value: 1.83e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIA----DSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLMS----- 79
Cdd:PRK06602  12 LIFLIVAIGLGILLLVAGKLLGprapDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSfreig 91

                         90       100       110
                 ....*....|....*....|....*....|.
gi 528889266  80 -----TMLVttFLVALVLGTVYEWGYGGLNW 105
Cdd:PRK06602  92 wlgfvEAMI--FILVLLVGLVYLWRKGALDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 5-105 7.53e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 64.70  E-value: 7.53e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   5 MVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILP--------M 76
Cdd:MTH00018   4 FILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwcvlynqiA 83

                         90       100
                 ....*....|....*....|....*....
gi 528889266  77 LMSTMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:MTH00018  84 PFGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ndhC CHL00022
NADH dehydrogenase subunit 3
 9-105 6.69e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.60  E-value: 6.69e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   9 LISLLVATVLIALACLTYKSIA----DSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLMS----- 79
Cdd:CHL00022  11 WAFLIISSLIPILAFLISGLLApiskGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSfdvlg 90

                         90       100
                 ....*....|....*....|....*....
gi 528889266  80 ---TMLVTTFLVALVLGTVYEWGYGGLNW 105
Cdd:CHL00022  91 vsaFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 5-105 3.82e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 47.36  E-value: 3.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   5 MVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPS----GVTRLPfcMKFFMVSVIFLVFDIEVALILPMLMST 80
Cdd:PRK07928   8 LVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTpqpaGGGRFP--VKYYLTAMLFIVFDIEIVFLYPWAVSF 85

                         90       100       110
                 ....*....|....*....|....*....|...
gi 528889266  81 MLVTTF-LVALVLGTV-------YEWGYGGLNW 105
Cdd:PRK07928  86 DALGVFgLVEMALFMLtvfvayaYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-107 1.55e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.95  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   1 MFYSMVYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPML--- 77
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLvsd 80

                         90       100       110
                 ....*....|....*....|....*....|.
gi 528889266  78 MSTMLVTTFLVALVLGTVY-EWGYGGLNWLV 107
Cdd:MTH00092  81 FSSLISFFMLMIFIFFGFYmEWWYGKLIWVI 111
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
6-106 3.69e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 37.03  E-value: 3.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528889266   6 VYGLISLLVATVLIALACLTYKSIADSEKMSPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPM--------L 77
Cdd:PRK07756  14 IFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWavaydklgL 93

                         90       100
                 ....*....|....*....|....*....
gi 528889266  78 MSTMLVTTFLVALVLGTVYEWGYGGLNWL 106
Cdd:PRK07756  94 FALIEMLIFVVMLLVGLAYAWKKKVLQWL 122
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-107 8.61e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.03  E-value: 8.61e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 528889266  36 SPFECGFDPSGVTRLPFCMKFFMVSVIFLVFDIEVALILPMLMSTMLVTT------FLVALVLGTVYEWGYGGLNWLV 107
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNfwyyyfFLLLLFLGFVVELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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