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Conserved domains on  [gi|524794162|emb|CDE90476|]
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putative uncharacterized protein [Clostridium sp. CAG:389]

Protein Classification

stage III sporulation protein AC( domain architecture ID 10021542)

stage III sporulation protein AC is part of the spoIIIA operon that acts at sporulation stage III as part of a cascade of events leading to endospore formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SpoIIIAC COG5824
Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle ...
 1-64 8.73e-22

Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444526  Cd Length: 65  Bit Score: 79.00  E-value: 8.73e-22
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 524794162  1 MSIDLLFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTLFNL 64
Cdd:COG5824   2 MDIDLIFKIAGIGILVAVLHTVLKQAGKEEQAQLVTLAGVVVVLFMVIQLISDLFQEVKSVFQL 65
 
Name Accession Description Interval E-value
SpoIIIAC COG5824
Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle ...
 1-64 8.73e-22

Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444526  Cd Length: 65  Bit Score: 79.00  E-value: 8.73e-22
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 524794162  1 MSIDLLFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTLFNL 64
Cdd:COG5824   2 MDIDLIFKIAGIGILVAVLHTVLKQAGKEEQAQLVTLAGVVVVLFMVIQLISDLFQEVKSVFQL 65
spore_III_AC TIGR02848
stage III sporulation protein AC; Members of this protein family are designated SpoIIIAC, part ...
 1-64 9.70e-14

stage III sporulation protein AC; Members of this protein family are designated SpoIIIAC, part of the spoIIIA operon of sporulation genes whose mutant phenotype is linked to sporulation stage III. Members of this family are encoded by the genome of a species if and only if that species is capable of endospore formation, as in Bacillus subtilis. The molecular function of this small, probable integral membrane protein is unknown. [Cellular processes, Sporulation and germination]


Pssm-ID: 131895  Cd Length: 64  Bit Score: 58.87  E-value: 9.70e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 524794162   1 MSIDLLFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTLFNL 64
Cdd:TIGR02848  1 LDISLIFKIAGVGILVAVIHTILKQSGKEEQAQMVTLAGIVVVLFMVITLINDLFNKIKTVFLL 64
SpoIIIAC pfam06686
Stage III sporulation protein AC/AD protein family; This family consists of several bacterial ...
 6-61 2.69e-09

Stage III sporulation protein AC/AD protein family; This family consists of several bacterial stage III sporulation protein AC (SpoIIIAC) and SpoIIIAD sequences. The exact function of this family is unknown. SpoIIIAD is the an uncharacterized protein which is part of the spoIIIA operon that acts at sporulation stage III as part of a cascade of events leading to endospore formation. The operon is regulated by sigmaG.


Pssm-ID: 461987  Cd Length: 56  Bit Score: 47.34  E-value: 2.69e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 524794162   6 LFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTL 61
Cdd:pfam06686  1 ILKIAGIGIIAAFLALILKDAGPEEIASLIELAGGIIILLLVLPKLSALLETIRSL 56
 
Name Accession Description Interval E-value
SpoIIIAC COG5824
Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle ...
 1-64 8.73e-22

Stage III sporulation protein SpoIIIAC, component of the engulfment complex [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444526  Cd Length: 65  Bit Score: 79.00  E-value: 8.73e-22
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 524794162  1 MSIDLLFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTLFNL 64
Cdd:COG5824   2 MDIDLIFKIAGIGILVAVLHTVLKQAGKEEQAQLVTLAGVVVVLFMVIQLISDLFQEVKSVFQL 65
spore_III_AC TIGR02848
stage III sporulation protein AC; Members of this protein family are designated SpoIIIAC, part ...
 1-64 9.70e-14

stage III sporulation protein AC; Members of this protein family are designated SpoIIIAC, part of the spoIIIA operon of sporulation genes whose mutant phenotype is linked to sporulation stage III. Members of this family are encoded by the genome of a species if and only if that species is capable of endospore formation, as in Bacillus subtilis. The molecular function of this small, probable integral membrane protein is unknown. [Cellular processes, Sporulation and germination]


Pssm-ID: 131895  Cd Length: 64  Bit Score: 58.87  E-value: 9.70e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 524794162   1 MSIDLLFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTLFNL 64
Cdd:TIGR02848  1 LDISLIFKIAGVGILVAVIHTILKQSGKEEQAQMVTLAGIVVVLFMVITLINDLFNKIKTVFLL 64
SpoIIIAC pfam06686
Stage III sporulation protein AC/AD protein family; This family consists of several bacterial ...
 6-61 2.69e-09

Stage III sporulation protein AC/AD protein family; This family consists of several bacterial stage III sporulation protein AC (SpoIIIAC) and SpoIIIAD sequences. The exact function of this family is unknown. SpoIIIAD is the an uncharacterized protein which is part of the spoIIIA operon that acts at sporulation stage III as part of a cascade of events leading to endospore formation. The operon is regulated by sigmaG.


Pssm-ID: 461987  Cd Length: 56  Bit Score: 47.34  E-value: 2.69e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 524794162   6 LFKIAAIGILVAVLYQVLVRAGREDQAMMTTLAGLVIVLTMVIKEISGLFDTVRTL 61
Cdd:pfam06686  1 ILKIAGIGIIAAFLALILKDAGPEEIASLIELAGGIIILLLVLPKLSALLETIRSL 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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