|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
5.76e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 295.14 E-value: 5.76e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 1 MLKFLMMALVMM---FMNKNTLKPSMWIMVSMF---NLSIHQGSTGKMSYLLIGDSLSFWITNMSLWVIMLILSIKMSNY 74
Cdd:MTH00163 1 MLKFLFMLLFLIplcFLKNSWWLVQSLLFLLSFlfmLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 75 EKH------KMIFMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMN 148
Cdd:MTH00163 81 KKNnysnlfLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 149 KFNYLNFWMLP-----AKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNF 223
Cdd:MTH00163 161 LYNNSGSLSFFllnffGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 224 INNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQ 303
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 304 MYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFC 383
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 52221072 384 VPTHGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMM 426
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
27-427 |
1.75e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 264.39 E-value: 1.75e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 27 VSMFNLSIHQGSTGKMSYLLIGDSLSFWITNMSLWV--IMLILSIKMSNYEKHKMIF----MLLTMILMTTFYCWNFLLF 100
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWIsgLMMLASQKSVKLRNKSSSFsllvLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 101 YIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNYL---NFWMLPAKIQMWEYLSIMFI---- 173
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYgssFMLLISSLRKLLSSMGLWGLlvfl 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 174 -FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAFSTWSIIILSIVCLMQSD 252
Cdd:MTH00150 161 aFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 253 LKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFI 332
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 333 LCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVPTHGNYSKMSKKITTYNSKNLTITIMHM 412
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*
gi 52221072 413 IPGIAMIIKSNLMMT 427
Cdd:MTH00150 401 VPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
7-426 |
3.09e-68 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 223.70 E-value: 3.09e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 7 MALVMMFMNKNTLKPSMWI---MVSMFNLSIHQGSTGK----MSYLLIGDSLSFWITNMSLWV--IMLILSIK-MSNY-E 75
Cdd:MTH00044 11 IAITSWIVPKNKLWPISISqssLISLLSLFLLNNHWSSswhnLSLSLATDSLSSPLIILSCWLapLSLLASINhLSNNsP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 76 KHKMIFMLLTMILMT----TFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFN 151
Cdd:MTH00044 91 NNQRTFISLIIIILTaliiTFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 152 YLNFWMLP------AKIQMWEYLSI-----MFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVM 220
Cdd:MTH00044 171 SSSSLSIPlselnwLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 221 TNFINNVT-SHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFF 299
Cdd:MTH00044 251 FSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFC 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 300 LCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSI 379
Cdd:MTH00044 331 LANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSL 410
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 52221072 380 IMFCVPTHGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMM 426
Cdd:MTH00044 411 LIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
21-425 |
3.26e-66 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 218.07 E-value: 3.26e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 21 PSMWIMVSMFNLSIhqgSTGKMSYLLIgdSLSFWITNMSLWVIMLILSIKMSnYEKHKMIFMLLTMILMTTFYCWNFLLF 100
Cdd:MTH00014 42 YPMSAPYSMFTESL---SSDMLSAPLI--TLTLWITALMILASFKIFQNNKA-PKTFMTNILILNLILLLTFSASNLLMF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 101 YIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLM------NKFNYLNFWMLPAKIQMWEYLSIMFI- 173
Cdd:MTH00014 116 YIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILlifytnNSLSMLMSSMEPPSIYLMNLWWLITIl 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 174 -FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAFSTWSIIILSIVCLMQSD 252
Cdd:MTH00014 196 aFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPD 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 253 LKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFI 332
Cdd:MTH00014 276 LKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 333 LCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVPTHGNYSKMSKKITTYNSKNLTITIMHM 412
Cdd:MTH00014 356 LSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHL 435
|
410
....*....|...
gi 52221072 413 IPGIAMIIKSNLM 425
Cdd:MTH00014 436 VPLFILILKPDLI 448
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
23-425 |
4.24e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 212.49 E-value: 4.24e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 23 MWIMVSMFNLSIHQGSTGKMSYLLIGDSLSFWITNMSLWVIMLIL--------SIKMSNYEKHKMIFMLLTMILMTTFYC 94
Cdd:MTH00206 32 IALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFlasqnhmkNEPINRQRIYITLLIVLQLFLILFFSS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 95 WNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNYLNFWMLP--------AKIQMWE 166
Cdd:MTH00206 112 SNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYilyfskltTWNNNLW 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 167 YLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAFSTWSIIILSIV 246
Cdd:MTH00206 192 WLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSI 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 247 CLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTM 326
Cdd:MTH00206 272 CLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 327 TTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVPTHGNYSKMSKKITTYNSKNLT 406
Cdd:MTH00206 352 SFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHL 431
|
410
....*....|....*....
gi 52221072 407 ITIMHMIPGIAMIIKSNLM 425
Cdd:MTH00206 432 LLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
4.34e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 207.14 E-value: 4.34e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 1 MLKFLMMALVMMFMNKNTLKPSMWI--MVSMFNLSIHQGSTGKMSYLLIGDSLSFWITNMSLW--VIMLILSIKMSNYEK 76
Cdd:MTH00205 6 VFSLLIILFVLKFKDWSFFSNLLLIglFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWisLLMVLASYKVFKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 77 HKMIF----MLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLM---NK 149
Cdd:MTH00205 86 NSKLFtvsvIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFflnSL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 150 FNYLNFWMLPAKIQMWEYLSIMFI-----FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFI 224
Cdd:MTH00205 166 NFSLSMFFNFPLNFSDFYLFLYWIflmlaFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 225 NNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQM 304
Cdd:MTH00205 246 NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 305 YKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCV 384
Cdd:MTH00205 326 YERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQ 405
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 52221072 385 PTHGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMM 426
Cdd:MTH00205 406 SQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
79-428 |
4.55e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 207.36 E-value: 4.55e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 79 MIFMLLTMILMTTFYCWNFLLFYIMFEMSMV--MIIITVmiWGYQPERVEATMFMVIMTSALSLPFF---LSLMNKFNYL 153
Cdd:MTH00124 97 TTLILLQTFLILAFSATELTLFYIMFEATLIptLILITR--WGNQPERLSAGTYFLFYTLISSLPLLiaiLYLHNQTGTL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 154 NFWML----PAKIQMWE----YLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFIN 225
Cdd:MTH00124 175 SLPMLqlthPTLTNSWTnlllWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLS 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 226 NVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMY 305
Cdd:MTH00124 255 NTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNY 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 306 KNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVP 385
Cdd:MTH00124 335 ERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLST 414
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 52221072 386 THGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMMTT 428
Cdd:MTH00124 415 QRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
79-426 |
1.37e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 195.52 E-value: 1.37e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 79 MIFMLLTMILmtTFYCWNFLLFYIMFEMSMV--MIIITVmiWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNY---- 152
Cdd:MTH00068 99 LIILQLTLIL--AFSATELILFYIFFEATLIptLIIITR--WGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSlgsl 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 153 -LNFWMLPAKIQMWEYLSIMF------IFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFIN 225
Cdd:MTH00068 175 sLILLELMSPMQLMTYTNKIWwlacllAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLS 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 226 NVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMY 305
Cdd:MTH00068 255 KELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNY 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 306 KNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVP 385
Cdd:MTH00068 335 ERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMT 414
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 52221072 386 THGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMM 426
Cdd:MTH00068 415 QRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-426 |
5.06e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 194.34 E-value: 5.06e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 1 MLKFLMMALVMMFMNKNTLKPSMWIMVSMFNLSI--------HQGSTGKMSY--LLIGDSLSFWITNMSLWVI--MLILS 68
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLIslisllllNQPNDNSLNFslLFFSDSLSTPLLILTTWLLplMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 69 ----IKMSNYEKHKMIFML--LTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPF 142
Cdd:MTH00110 81 qhhlSKEPLTRKKLYITMLilLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 143 FLSLMNKFNY---LNFWMLPAKIQ----------MWeyLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKL 209
Cdd:MTH00110 161 LVALLYIQNNlgsLNFLLLQLWAQplpnswsnnlLW--LACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 210 GGYGMIRMNVMTNFINNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLG 289
Cdd:MTH00110 239 GGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 290 HGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILM 369
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 52221072 370 MMMVSFSYSIIMFCVPTHGNYSKMSKKITTYNSKNLTITIMHMIPGIAMIIKSNLMM 426
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIIL 455
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
84-425 |
1.07e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 188.24 E-value: 1.07e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 84 LTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSL-----------MNKFNY 152
Cdd:MTH00127 103 LQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALlllqnstgtlsMLTLQY 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 153 LNFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHII 232
Cdd:MTH00127 183 SQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 233 IAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRS 312
Cdd:MTH00127 263 IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 313 MIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVPTHGNYSK 392
Cdd:MTH00127 343 MLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPD 422
|
330 340 350
....*....|....*....|....*....|...
gi 52221072 393 MSKKITTYNSKNLTITIMHMIPGIAMIIKSNLM 425
Cdd:MTH00127 423 HIIALNPSHTREHLLMALHLLPLLLLILKPELI 455
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
81-313 |
4.25e-41 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 152.16 E-value: 4.25e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYqPERVEATMFMVIMTSALSLPFFLSLM--------NKFNY 152
Cdd:COG1008 117 LLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILalyflagaLTFDI 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 153 LNF--WMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNV-MTNFINNVTS 229
Cdd:COG1008 196 AELaaAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALpLFPEASAYFA 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 230 HIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNK 309
Cdd:COG1008 276 PLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTH 355
|
....
gi 52221072 310 SRSM 313
Cdd:COG1008 356 TRDI 359
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
48-382 |
1.72e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 150.60 E-value: 1.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 48 GDSLSFWITNMSLWVIMLILSIKMSNYEKHKMIFML--LTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERV 125
Cdd:MTH00204 83 GVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLlfLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 126 EATMFMVIMTSALSLPFFLSLM---------NKFNYLNFwMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPI 196
Cdd:MTH00204 163 RASYYFFFYTFAGSVFMLLGIFqlysitgttDYQILLNI-KLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 197 QGSMILAAVMLKLGGYGMIRMN-VMTNFINNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLT 275
Cdd:MTH00204 242 AGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTH 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 276 KEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKL 355
Cdd:MTH00204 322 TIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLA 401
|
330 340
....*....|....*....|....*..
gi 52221072 356 VMEWSMKSVLFILMMMMVSFSYSIIMF 382
Cdd:MTH00204 402 AFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
81-353 |
2.73e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 147.01 E-value: 2.73e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGyQPERVEATMFMVIMTSALSLPFFLSLM-------NKFNYL 153
Cdd:TIGR01972 112 LLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILglyflggGTFDLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 154 NFWM--LPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNvMTNFIN--NVTS 229
Cdd:TIGR01972 191 ELLNlpLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN-LPLFPDasLYFA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 230 HIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNK 309
Cdd:TIGR01972 270 PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAH 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 52221072 310 SRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTL 353
Cdd:TIGR01972 350 TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-353 |
2.07e-38 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 144.96 E-value: 2.07e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 48 GDSLSFWITNMSLWVIMLILSIKM-SNYEKHKMI-FMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYqPERV 125
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWEEiKKRVKFYMAaLLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG-KNRI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 126 EATMFMVIMTSALSLPFFLSLM----------NKFNYLNfWM---LPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHV 192
Cdd:PRK05846 161 YAATKFFLYTLLGSLLMLVAIIylvvvyynatGTFDIAD-LLnlpLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHV 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 193 ESPIQGSMILAAVMLKLGGYGMIRMNV-MTNFINNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAG 271
Cdd:PRK05846 240 QAPTAGSVLLAGILLKMGAYGLLRFSLpLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 272 ISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEIL 351
Cdd:PRK05846 320 IFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFL 399
|
..
gi 52221072 352 TL 353
Cdd:PRK05846 400 IL 401
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
82-392 |
9.42e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 142.88 E-value: 9.42e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 82 MLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFM--------VIMTSALSLPFFLSLMNKFNYL 153
Cdd:MTH00217 116 LVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFffytfigsVFMLLGIFTLYSYAGTTDYQAL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 154 NFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNV-MTNFINNVTSHII 232
Cdd:MTH00217 196 CCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWpLLPEASEYFSPLI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 233 IAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRS 312
Cdd:MTH00217 276 QTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRL 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 313 MIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSIIMFCVPTHGNYSK 392
Cdd:MTH00217 356 IKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSK 435
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
96-361 |
1.20e-37 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 138.22 E-value: 1.20e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 96 NFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNYLN-----------FWMLPAKIQM 164
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskalTGGLNSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 165 WEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAFSTWSIIILS 244
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 245 IVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQM-YKNNKSRSMIMNKGTTTMS 323
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViYRRVHTRNIRDYGGLAKTM 242
|
250 260 270
....*....|....*....|....*....|....*...
gi 52221072 324 PTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSM 361
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASW 280
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-380 |
5.02e-35 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 133.88 E-value: 5.02e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 19 LKPSMWIMVSMFNLSIHQGSTGKMSYLLIGDSLSFWITNMSLWVIMLILSIKMSNYEKhKMIFMLLTMILMTTFYCWNFL 98
Cdd:MTH00094 7 FSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNL-LILSNLLILICLLFFVSSNML 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 99 LFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNYLNFWMLPAKIQMWEYLSIMFIFMVKL 178
Cdd:MTH00094 86 MLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMFFILSLSFMMKF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 179 PAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTShiiIAFSTWSIIILSIVCLMQSDLKSMIA 258
Cdd:MTH00094 166 PVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNFW---IIFSLLGMILSSFCCVFQSDSKSLAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 259 YSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNA 338
Cdd:MTH00094 243 YSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNS 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 52221072 339 PMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYSII 380
Cdd:MTH00094 323 GVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
92-313 |
6.13e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 132.46 E-value: 6.13e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 92 FYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMV--------IMTSALSLPFFLSLMNkFNY--LNFWMLPAK 161
Cdd:PRK12561 104 FLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILytalasifILVAGLALALSGDTFT-FDLaeLGAKSYPLA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 162 IQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNV-MTNFINNVTSHIIIAFSTWSI 240
Cdd:PRK12561 183 LELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNI 262
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52221072 241 IILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSM 313
Cdd:PRK12561 263 IYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSI 335
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
82-378 |
2.22e-33 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 131.20 E-value: 2.22e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 82 MLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFN------YLNF 155
Cdd:MTH00226 138 LILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNihgttdYLTL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 156 ----WMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMN--VMTNFINNVTS 229
Cdd:MTH00226 218 ascsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwpILPLGAQNLAP 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 230 hIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNK 309
Cdd:MTH00226 298 -AVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHH 376
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 52221072 310 SRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMKSVLFILMMMMVSFSYS 378
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYS 445
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
81-305 |
5.67e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 109.80 E-value: 5.67e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMI--LMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMV--------IMTSALSLPFFLSLMN-K 149
Cdd:PRK02546 119 FLMLAMYggQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILytagsslfILLAALAMAFYGDTPTfD 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 150 FNYLNFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNV-MTNFINNVT 228
Cdd:PRK02546 199 MTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPDAHAQF 278
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 52221072 229 SHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMY 305
Cdd:PRK02546 279 APLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATY 355
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
92-311 |
1.26e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 102.86 E-value: 1.26e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 92 FYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMV--------IMTSALSLpFFLSLMNKFNY--LNFWMLPAK 161
Cdd:PRK06473 124 FLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLytaisgilILVSFLGL-VWLSGASSFDYepLRSHTLPLS 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 162 IQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVmtNFINNVTSHIIIAFSTWSII 241
Cdd:PRK06473 203 TQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGV--GLFPEAWVYLAPWLATWAVV 280
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52221072 242 ILSIVCLM---QSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSR 311
Cdd:PRK06473 281 SVLYGASCaiaQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
92-300 |
5.24e-23 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 100.79 E-value: 5.24e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 92 FYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMV--------IMTSALSLPFFLSLMNKFNY--LNFWMLPAK 161
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILytaggsifLLIGVLGMGLYGSNEPTLNFetLANQSYPVA 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 162 IQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVmtnfinNVTSHIIIAFSTWSII 241
Cdd:CHL00011 209 LEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM------ELLPHAHSIFSPWLVI 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 52221072 242 ILSI-------VCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFL 300
Cdd:CHL00011 283 VGAIqiiyaasTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFL 348
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
46-370 |
2.81e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 98.30 E-value: 2.81e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 46 LIGDSLSFWITNMS--LWVIMLILSIKMSNYEKHKMIFMLLTMILMTT----FYCWNFLLFYIMFEmsmVMIIITV--MI 117
Cdd:COG0651 72 LVADRLSALFLLLTalVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGmngaFLTGDLFNLFVFFE---VMLLASYglVA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 118 WGYQPERVEATMFMVIMT---SALSLPFFLSLMNKFNYLNFWMLPAKIQ----MWEYLSIMFI---FMVKLPAFTLHAWL 187
Cdd:COG0651 149 LGGTKEALRAGLKYLILNlvgSALFLLGVGLLYGATGTLNMADLAARLAeldpGLLLAAFALLlvgFGIKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 188 PKLHVESPIQGSMILAAVMLKLGGYGMIRM--NVMTNFINNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHM 265
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVltLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 266 GLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSIN 345
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340
....*....|....*....|....*
gi 52221072 346 ILGEILTLKLVMEWSMKSVLFILMM 370
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLAAVLLL 413
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
42-300 |
3.54e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 80.53 E-value: 3.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 42 MSYLLIGDSLSF-WITNMSLWVIMLILSIKMSNyEKHKMIFMLLTMI---LMTTFYCWNFLLFYIMFEMSMVMIIITVMI 117
Cdd:PRK07363 71 LSYSLGVDGLSLpLLVLNSLLTWIAIYSIGENT-ERPRLYYSLILLInggIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 118 WGYQpERVEATMFMVIMTS---ALSLPFFLSLM-----NKFNY--LNFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWL 187
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAvsgLLVLAAFLGIVwlsgsTSFDYdaISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 188 PKLHVESPIQGSMILAAVMLKLGGYGMIRMNVmtNFINNVTSHIIIAFSTW---SIIILSIVCLMQSDLKSMIAYSSIVH 264
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGL--QLFPQTWSLVAPGLAIIgtiSVIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270
....*....|....*....|....*....|....*.
gi 52221072 265 MGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFL 300
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHL 342
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
174-313 |
1.40e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 72.31 E-value: 1.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 174 FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRM-------NVMTNFINNVTSHIIIAFSTWSIIILSIV 246
Cdd:PRK12667 233 FTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALM 312
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 52221072 247 CLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSM 313
Cdd:PRK12667 313 MVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDI 379
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
81-299 |
3.87e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 3.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSA-----LSLPFFLSLMNKF---NY 152
Cdd:PRK08676 108 FNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafIGLIFLFSLTRQAlgtGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 153 LNFW-------MLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVM--TNF 223
Cdd:PRK08676 188 LNWTelaahasLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALlrQSG 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 52221072 224 INNVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFF 299
Cdd:PRK08676 268 AAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFF 343
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
168-299 |
5.65e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 70.34 E-value: 5.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 168 LSIMFIFMV-----KLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMT--NFINNVTSHIIIAFSTWSI 240
Cdd:PRK06458 213 MKLAFVFLLigfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSV 292
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 52221072 241 IILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFF 299
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFF 351
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
170-299 |
4.24e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 64.52 E-value: 4.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 170 IMFIFM-VKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNV----MTNFINNVTSHIIIAFSTWSIIILS 244
Cdd:PRK08375 207 FVLLALaLKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 52221072 245 IVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFF 299
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFL 341
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
45-384 |
1.01e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.94 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 45 LLIGDSLSFWITNMSLWVIMLILSIKMSNYEKHKMIFMLLTMIL-MTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPE 123
Cdd:MTH00062 40 LFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIFsILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 124 RVEATMFMVIMTSALSLP-----FFLSLMNKFNYLNFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQG 198
Cdd:MTH00062 120 RYLASWYFLGYLLLTSLPlllclLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 199 SMILAAVMLKLGGYGMIRmnvMTNFINNVTSHIIIAFstwsIIILSIVCLMQS----DLKSMIAYSSIVHMGLTLAGISL 274
Cdd:MTH00062 200 SIFLSGYIMKLGLLGVYR---FCGFIFSGSFLGYLFL----CCLFSVFFLITAcselDGKRWLAFLSLSHILVPVLGLFV 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 275 TKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRS-MIMNKGTTTMSPTMTTSWFILCMMnAPMPPSINILGEILTL 353
Cdd:MTH00062 273 GDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNwVLLKSGINGSLVLRVIVVFSFLSL-CSFPPTIQFFCEVFLV 351
|
330 340 350
....*....|....*....|....*....|.
gi 52221072 354 KLvmewSMKSVLFILMMMMVSFSYSIIMFCV 384
Cdd:MTH00062 352 SS----SFGVLVYLLFWCFYLFFGGLVPLIL 378
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
21-298 |
2.98e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 2.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 21 PSMWIMVSMFNLSIhqGSTGKMSYLLIGDSLSFWITNMSlWVIMLI------------LSIKMSNYEKHKMIFMLLTMIL 88
Cdd:PRK08668 35 PLLFLIKLYFTLKV--GTGEKLTLFFGGFKLTFTLTHLS-WFFAMIsllvifsvaffmVSEKTKNDAYFNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 89 MTTFYCWNFLLFYIMFEMsMVMIIITVMIWGYQPERVEATMFMVImtSALSLPFFL----SLMNKFNYLNFWMLPAKIQM 164
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEI-MTFSSFMMVPMGKKESRKASLKYFVL--SAIGAYAMLyaifLIYAKTGTFDFADISQGLIN 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 165 W---EYLSIMFIFMV-----KLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMI-------RMNVMTNFIN---- 225
Cdd:PRK08668 189 DtstGFALIVFLFLLafgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLlvlyvlpGTKLFSEFGTyrgv 268
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52221072 226 NVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
169-298 |
7.39e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 57.47 E-value: 7.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 169 SIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTS--HIIIAFSTWSIIILSIV 246
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSvlKLVIIMATLTVFFAELS 290
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 52221072 247 CLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
174-300 |
9.83e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.27 E-value: 9.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 174 FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNfinnVTSHIIIAFSTWSIIILSIVCLMQSDL 253
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP----GLDLIVRIFGVGTALLGVLFALLEKDL 269
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 52221072 254 KSMIAYSSIVHMGLTLAgisltkekGIISSVIIMLGHGMCSSALFFL 300
Cdd:PRK07234 270 KRMLAFSTISQLGFILA--------APLVGGLYALAHGLVKSTLFLC 308
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
46-304 |
1.71e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.50 E-value: 1.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 46 LIGDSLSFWITNMSLWVIMLILSIKMSNYEKHKMIFMLLTMI-LMTTFYCWNFL---LF--YIMFEmsmVMIIIT--VMI 117
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFIlLLMAGVIGSFLtgdLFnlYVWFE---VMLIASfvLIT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 118 WGYQPERVEATMFMVIMtSALSLPFFLS----LMNKFNYLNFWMLPAKI-QMWEYLSIMFIFMVKLPAFTLHA------W 186
Cdd:PRK12663 150 LGQEREQLRGAIKYVVL-NLIGSWLFLLgiglLYGTFGTLNMAHIAMRLnDMGDTATLTTIALLFLLAFGMKAalfpfmW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 187 LPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAF-STWSIIILSIVCLMQSDLKSMIAYSSIVHM 265
Cdd:PRK12663 229 LPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATmAAITMVIGALGALAYKDIRRIAGYQVISSI 308
|
250 260 270
....*....|....*....|....*....|....*....
gi 52221072 266 GLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQM 304
Cdd:PRK12663 309 GFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSL 347
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
82-274 |
2.92e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 55.89 E-value: 2.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 82 MLLTMILMTTFycwNFLLFYIMFEMSMVMIIITvmiwGYQ-PERVEATMFMVIMTSALSLPFFLSLMNKFNYLNFWML-- 158
Cdd:PRK08667 124 MLGVVASANTF---SFLFFWEIMALSSFFLVMN----DYQeEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELsp 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 159 ---PAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMTNFINNVTSHIIIAF 235
Cdd:PRK08667 197 lgaSAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLA 276
|
170 180 190
....*....|....*....|....*....|....*....
gi 52221072 236 STWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISL 274
Cdd:PRK08667 277 GSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGL 315
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
183-275 |
9.25e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.12 E-value: 9.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 183 LHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRmnVMTNFINNVT---SHIIIAFSTWSIIILSIVCLMQSDLKSMIAY 259
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLGAPGwwwGVLVLALGAISAVLGVLYALAEHDLKRLLAY 306
|
90
....*....|....*.
gi 52221072 260 SSIVHMGLTLAGISLT 275
Cdd:PRK06521 307 STIENIGIIFVGLGLA 322
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-298 |
1.06e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.82 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 100 FYIMFEMSMVMIIItvmiwGYQPERVEATMFMVIMTSALSLPFFLSLmnKFNY------------LNFWMLPAKIQMWEY 167
Cdd:PRK12665 140 FEILLVASYVLLTL-----GATAARVRAGVTYVMVSMVSSLLFLIGI--ALVYaatgtlnmadlaVRLDELPSGTRTALF 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 168 LSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVM---TNFINNVTshIIIAFSTWSIIILS 244
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLlfpGGGLDTLL--MVVALLTMVVGILG 290
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 52221072 245 ivCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK12665 291 --AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
168-298 |
1.16e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.50 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 168 LSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMnVMTNFINNVT------SHIIIAFSTWSII 241
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRI-VYDVFKANFVfttlpfNNVFMILAALAIV 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 52221072 242 ILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALF 348
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
171-306 |
2.01e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.95 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 171 MFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRmnVMTNFINN---VTSHIIIAFSTWSIIILSIVC 247
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIAR--TFTLFFSHdtsFTHYLILILALLTIIFGVIGA 293
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 52221072 248 LMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFLCNQMYK 306
Cdd:PRK07691 294 VAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIK 352
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
79-298 |
3.13e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.05 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 79 MIFMLLTMILMTTfyCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMtSALSLPFFL---SLMNKF-NYLN 154
Cdd:PRK05777 109 VLFALLGMMVMVS--ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVL-GALASGFLLygmSLLYGAtGSLS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 155 FWMLPAKIQMWEYLSIMFIFMV---------KLPAFTLHAWLPKLHVESPIQGSMILAAVMlKLGGYGMIrMNVMTNFIN 225
Cdd:PRK05777 186 FAGIAKALADGSGNSLLLLFGLvfllvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVL-LRLLVVAFG 263
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 52221072 226 NVTSH---IIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK05777 264 GLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
181-300 |
9.41e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.12 E-value: 9.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 181 FTLHAWLPKLHVESPIQGSMILAAVMLKLGGYGMIRMNVMtnFINNVTSHIIIAFSTWSIIILSIVCLMQ-SDLKSMIAY 259
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPV--FHDVAVWNWLLIIVGMITALMGAVFAVQkTDLKKLTAY 302
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 52221072 260 SSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALFFL 300
Cdd:PRK12650 303 STVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFML 343
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
53-299 |
2.06e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.71 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 53 FWITNMSLWVIMLILSIKMSNYEKHKMIFMLLTMILMTTFYCW-NFLLFYIMFEMsmVMIIITVMIWGYQPERVEATMFM 131
Cdd:PRK06459 49 FSIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSdNYLLFLAGWEI--MTIPSYVAIALTKKNKRPAFVFM 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 132 VI--MTSALSLPFFLSLMNKFNYLNFWMLPAkiqMWEYLSIMFIFMVKLPAFTLH--AWLPKLHVESPIQGSMILAAVML 207
Cdd:PRK06459 127 AFgeLSTVLILAGFAWAFIISGTTNFSYLPS---PVPLILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILSATMT 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 208 KLGGYGMIRMNVMTNFIN-NVTSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKekgIISSVII 286
Cdd:PRK06459 204 LMGVYGILKMTILTQTIPiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYM---VTKQLIT 280
|
250
....*....|...
gi 52221072 287 MLGHGMCSSALFF 299
Cdd:PRK06459 281 SIEHFSLITVILY 293
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-394 |
3.52e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 45.96 E-value: 3.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 130 FMVIMTSALSLPFFLSLMNKFNYLNFWMLPA-KIQMWEYLSIMFIF-MVKLPAFTLHAWLPKLHVESPIQGSMILAAVML 207
Cdd:PRK06589 174 ILMISALLLFLPAVILIYTKTGNLDFVSGGLfSKNQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVV 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 208 KLGGYGMIRMNVMTNFINNVT-----SHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIIS 282
Cdd:PRK06589 254 KTGLFCIYKILLYIFGLSYLQrifaeFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGA 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 283 SVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLKLVMEWSMK 362
Cdd:PRK06589 334 AILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQP 413
|
250 260 270
....*....|....*....|....*....|..
gi 52221072 363 SVLFILMMMMVSFSYSIIMFCVPTHGNYSKMS 394
Cdd:PRK06589 414 WLSIIVMLVVIASSILSALYLLKILSSIYKPS 445
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
25-291 |
5.97e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 45.11 E-value: 5.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 25 IMVSMFNLSIHQGSTgkMSYLLIGDSLSFWITNMSLWVIMLILSIKMSNYEKHK---------MIFMLLTMILMTTFYcw 95
Cdd:COG1007 47 LALLLLALGGGTGTA--FGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGllrgefyalLLFATLGMMLMASAN-- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 96 NFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMtSALSLPFFL---SLMnkfnY-----LNFWMLPAKIQMWEY 167
Cdd:COG1007 123 DLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL-GALSSGFLLygiSLL----YgatgsLNLAGIAAALAAGGA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 168 LSIMFI----FMV-----KLPAFTLHAWLPKLHVESPIQGSMILAAVMlKLGGYGMIrMNVMTNFINNVTSH---IIIAF 235
Cdd:COG1007 198 NSPLLLlglvLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAL-LRLLVEAFPGLAADwqlLLAVL 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 52221072 236 STWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHG 291
Cdd:COG1007 276 AVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYL 331
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
81-300 |
1.13e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.19 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMILMTTF-YCWNFLLFYIMFEmsmvmiIITVMIWG----YQ-PERVEATMFMVIMTSALSLPFFLSL------MN 148
Cdd:PRK06525 118 FLLLFIGAMAGLvYSSTLLGLLLFFE------ITGLCSWAlisyYQsPKALRSALKALLITHIGSLGLYLAAatlflqTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 149 KFNYLNFWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLhVESPIQGSMIL-AAVMLKLGGYGMIRMNVMTNFINNV 227
Cdd:PRK06525 192 TFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHV 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 52221072 228 TSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLT---KEKGIISSVIIMLGHGMCSSaLFFL 300
Cdd:PRK06525 271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKS-LFFL 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
81-272 |
3.67e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 42.26 E-value: 3.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 81 FMLLTMIL--MTTFYCWNFLLFYIMFEMSMvMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLSLMNKFNYLNFWML 158
Cdd:MTH00200 8 LFILSLGLgtLLTFSSSHWFLIWLGLEINT-LAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 159 PAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMlKLGGYGMirmnvMTNFINNVTSHIIIAFSTW 238
Cdd:MTH00200 87 SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPFAL-----LIQLAPALNSNILLLLGLL 160
|
170 180 190
....*....|....*....|....*....|....
gi 52221072 239 SIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGI 272
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL 194
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
174-298 |
3.84e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 42.63 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 174 FMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMlKLGGYGMIrMNVMTNFINNVTSHIIIAF---STWSIIILSIVCLMQ 250
Cdd:TIGR01770 213 LLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVF-LRLFLYILFGFSEAWQIFLaiiAFLSMLIGNFGALAQ 290
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 52221072 251 SDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:TIGR01770 291 KKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
167-283 |
1.00e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 41.38 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 167 YLSIMFIFMVKLPAFTLHAWLPKLHVESPIQgSMILAAVMLKLGGYGMirmnvMTNFInnVTSHIIIAFSTWSIIILSIV 246
Cdd:MTH00198 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTP-TTALIAIIPKFTVYIL-----LTSLV--ITSKLLLSVAIISLVVGAFG 373
|
90 100 110
....*....|....*....|....*....|....*..
gi 52221072 247 CLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISS 283
Cdd:MTH00198 374 ALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAS 410
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-272 |
2.58e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 40.08 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 100 FYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTSALSLPFFLS---LMNKFNYLNFWMLPAKIQMWEYL--SIMFIF 174
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGialLYGQYGTLNMAYLAVKMSENPTVvaKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 175 MV-----KLPAFTLHAWLPKLHVESPiqGSMILAAVMLKLGG-YGMIRMN--VMTNFINNVT-SHIIIAFSTWSIIILSI 245
Cdd:PRK08376 226 FIaglamKSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARVLfsIYGPAINLATvGWVIIILGCLTMFVGVA 303
|
170 180
....*....|....*....|....*..
gi 52221072 246 VCLMQSDLKSMIAYSSIVHMGLTLAGI 272
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGYMLLGL 330
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
181-298 |
4.11e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 39.52 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 181 FTLHAWLPKLhVESPIQGSMIL-AAVMLKLGGYGMIRMNvmtnfinnvtsHIIIAFSTWSIIIL----------SIVCLM 249
Cdd:PRK12647 212 FPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLN-----------PVLGGTPLWQTILPlfggltmltgALLAVR 279
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 52221072 250 QSDLKSMIAYSSIVHMGLTLAGISLTKEKGIISSVIIMLGHGMCSSALF 298
Cdd:PRK12647 280 QTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALF 328
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
80-302 |
6.45e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 38.37 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 80 IFMLLTMILMTTFYCW---NFLLFYIMFEMSmVMIIITVMIWGYQPERVEATM--FMVIMTSALSLpFFLSLMNKFNYlN 154
Cdd:MTH00041 6 LIFLITSIILGTIIVIssnHWFLIWLGLELN-TLSIIPILSSNFSPRSVEATIkyFLVQAFSAAIL-LNGALIQAWLS-G 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 155 FWMLPAKIQMWEYLSIMFIFMVKLPAFTLHAWLPKLHVESPIQGSMILAAVMlklggyGMIRMNVMTNFINNVTSHIIIA 234
Cdd:MTH00041 83 SWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQ------KIAPLILLISISNLLNSNILIL 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52221072 235 FSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISLTKEKGII--SSVIIMlghgmcSSALFFLCN 302
Cdd:MTH00041 157 CGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIImfLIYIII------NTSIFLIGN 220
|
|
| |
