|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
75-807 |
1.04e-47 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 180.07 E-value: 1.04e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 75 EDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLPVAAGgakfltLQEDGLPvlqfgDIAFGNADIFvradsTMA 154
Cdd:COG4774 19 ELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFSASGD------IYVDGLR-----DPGQYRRDTF-----NLE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 155 RLDVIRGGSASTAASNSPGGIINFISKT-GEHQGGSIAISSGlNYDQFRTDFEFGGDINNDMRFHFGGFVRQGEGVRDPG 233
Cdd:COG4774 83 RVEVLKGPASVLYGRGSPGGVINLVTKRpTDEPFTEVTLTYG-SDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 234 YQgeRGYQIKANVTKEFSAGY-VRVYAKHLNDRAASYMPMPMYADGSSVPgydaqkdtlqsvyltqtvrLNGDNQIsrGD 312
Cdd:COG4774 162 DN--DRWGIAPSLTWRLGDRTrLTLDYEYQDDDRTPDYGVPAVANGRPVD-------------------VDRSTFY--GQ 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 313 VRNGMNPKVDSFGIEAQFDLDENWTLDNRFRISDVSGNFITlfpaevgnaqgiadsiagnnstlTYAVGPQAGQNYTAAD 392
Cdd:COG4774 219 PDDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRN-----------------------TYPTGGNATGTVTRSA 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 393 AMRIHTFDVEINDfgsmvNDLKLARSFGDVDVTFgyymadqTISMSWLWNSYLMALKGNNAELLNVNAADGTafseqgql 472
Cdd:COG4774 276 YRRDQDNDTLSNQ-----TDLTGKFDTGGVKHTL-------LAGVEYSREDSDNARYSGGGTAPTVNLYNPV-------- 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 473 aYGVPFWG-NCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDmnndgaisqieqsvsgi 550
Cdd:COG4774 336 -YGAPVTGpTLGGADNDSRTDTTGLYLQDTISLTDrWSLLAGLRYDRFDTDYTDRTTGATTSS----------------- 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 551 dlanpqlvnYSWGYNSYSAGANYQFNRDWAMFGRISKGARANADrlLFGKVNADGSVAREDAidevKQYEIGSKS--RHG 628
Cdd:COG4774 398 ---------YDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGG--APSLSNAGQALDPEKS----RQYEVGVKWdlLDG 462
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 629 NLNLFATLFFAE-TDEQNFEATTQLFFDRV--YKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDAlNPDVVGNTPRRQ 704
Cdd:COG4774 463 RLSLTAALFRIEkTNVRTTDPANPGVYVQTgeQRSRGVELEATGELTPgWSVLAGYTYLDAEITKSA-NAANVGNRLPNV 541
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 705 ADMIYSLLARY--TMDNAQVGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTIGITEAeqgs 782
Cdd:COG4774 542 PRHSASLWTTYdlPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASA---- 617
|
730 740
....*....|....*....|....*
gi 518505941 783 vpeNGIITARTINGRTASVGLRYQF 807
Cdd:COG4774 618 ---YGSGYVTPGAPRTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
75-807 |
2.87e-36 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 145.67 E-value: 2.87e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 75 EDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLpvaagGAKFLTLQEDGLPVLQFGDIAFGNADIFvraDSTMA 154
Cdd:cd01347 8 EDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGF-----GPDRTLVLVDGLPLASSNYGRGVDLNTI---PPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 155 -RLDVIRGGSASTAASNSPGGIINFISKTGEHQ-GGSIAISSGLN--YDQFRTDFEFGGDI--NNDMRFHFGGFVRQGEG 228
Cdd:cd01347 80 eRVEVLKGPSSALYGSGAIGGVVNIITKRPTDEfGGSVTAGYGSDnsGSSGGGGFDVSGALadDGAFGARLYGAYRDGDG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 229 VRDPGYQGER------------GYQIKANVTKEFSAGYvrvyAKHLNDRAasYMPMPMYADGSSVPGydaqkdtlqsvyl 296
Cdd:cd01347 160 TIDGDGQADDsdeerynvagklDWRPDDDTRLTLDAGY----QDQDADGP--GGTLPANGTGSSLGG------------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 297 TQTVRLNGDNQISRGDVRNGMNpkvdSFGIEAQFDlDENWTLDNRFRISDVSGNFITLFPAEVGNAQGIADSIAGNNSTL 376
Cdd:cd01347 221 GPSSNTNGDRDWDYRDRYRKRA----SLGLEHDLN-DTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSER 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 377 TYavgpqagqnytaadamRIHTFDVEINdfgsmvndlklaRSFGDVDVTFgyymadqtismswlwnsylmalkgnnaell 456
Cdd:cd01347 296 DT----------------TQLGFDAGLN------------APFGTGPVAH------------------------------ 317
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 457 nvnaadgtafseqgQLAYGVPFwgnccqRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDMN 535
Cdd:cd01347 318 --------------TLTLGVEY------RREELDEKQTALYAQDTIELTDdLTLTLGLRYDHYDQDSKDTIAGGTTAKKS 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 536 NDgaisqieqsvsgidlanpqlvnyswgYNSYSAGANYQFNRDWAMFGRISKGARANADRLLFGKVNADGSVARED---A 612
Cdd:cd01347 378 YS--------------------------HWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGNpnlK 431
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 613 IDEVKQYEIGSKSRHGN-LNLFATLF--------FAETDEQNFEATTQLFFDRVYKAKGIELESSYRIGD-FDFRGSVTF 682
Cdd:cd01347 432 PEKSKQYELGLKYDPGDgLTLSAALFridikneiVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDgLGLTGSYTY 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 683 TDAEISSDALNPDvvGNTPRRQADMIYSLLARYTMDNAQVGISLVGT-----TDSYAQDNNDLKFSGYTQLNAFANYELA 757
Cdd:cd01347 512 TDTEVKRTDGATT--GNRLPGIPKHTANLGLDYELPDEGLTAGGGVRyrgkqYADTANGNNTVKVPGYTLVDLSASYQFT 589
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 518505941 758 ENLTLSLNVNNLFDTigiTEAEQGSVPENGIITArTINGRTASVGLRYQF 807
Cdd:cd01347 590 KNLTLRLGVNNLFDK---DYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
71-807 |
3.22e-24 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 108.27 E-value: 3.22e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 71 TLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGN-ANIAVRGLPVAAGGAKFLTlqeDGLPVLqfgdiafGNADIFVRA 149
Cdd:TIGR01783 8 VITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfGNITIRGFGLEVDIDNVYL---DGVPLL-------SRGNLAIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 150 DSTMARLDVIRGGSASTAASNSPGGIINFISKTG-EHQGGSIAISSGlNYDQFRTDFEFGGDINNDmrFHFGGFV----R 224
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPqDEPKGSVTFGAG-TRSGYRTAFDLGGPLGAD--GTFRGRLngarQ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 225 QGEGVRDpgYQGER--------GYQIKANVTKEFSAGYvRVYAKHLNDRAASYMPmpmyadgsSVPGYDAQKDTLQSvyl 296
Cdd:TIGR01783 155 DGDSFYD--GAGEEtrlgatatDWQLDDRTLLRLGAYY-QKERDRGGYGGLPASG--------GTSGRDLSSDRYLG--- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 297 TQTVRLNGDNQISRGdvrngmnpkvdsfGIEAQFDLDENWTLDNRFRISDVSGNFITLFPAEVGNAQGIADSIAGNNSTL 376
Cdd:TIGR01783 221 TSSNRNYDDREYLSY-------------GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVK 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 377 TYAVGPQAGQNytaadaMRIHTFDVEIndfgsmvndlklarsfgdvdvTFGYYMADQTISMSWLWNSYLMALKGNNAELL 456
Cdd:TIGR01783 288 QDRVQIDAGLD------GEFETGPIEH---------------------DLLLGVSYGQRTTNRFNNTGYPSDNIYSLTAT 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 457 NVNAADGTAFSEQGQLaygvpfwgnccqrnYDTQYSTTAPYINVGWAFGDWSLDASVRRDNGKatgtyagasqssRDMNN 536
Cdd:TIGR01783 341 SSARTDIGDSPKDRAL--------------SSTTKALNGVALQRILLADKWTLTLGGRYDSVD------------VKSNN 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 537 DGAISQIEQSVSgidlanpqlvNYSWgynsySAGANYQFNRDWAMFGRISKGARANADRLLFGKVNADGSVAredaiDEV 616
Cdd:TIGR01783 395 GVAGSTGKRDDS----------QFTP-----SLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEP-----EKG 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 617 KQYEIGSKSRHGNLNLF-ATLF---FAETDEQNFEATTQLFFDRVYKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDA 691
Cdd:TIGR01783 455 KNYELGVRYDLGDSLLAtAALFritKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPgLSLSAGYTYTDAEFTEDT 534
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 692 lNPDVVGNTPRRQADMIYSLLARY---TMDNA-QVGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELA--ENLTLSLN 765
Cdd:TIGR01783 535 -NGDTQGNTVPFVPKHTASLWASYappVGDNGlTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTkkKNLTLALN 613
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 518505941 766 VNNLFDTIGITEAEQGSvPENGIITARtinGRTASVGLRYQF 807
Cdd:TIGR01783 614 VNNLFDRDYYTSGYRWG-PSAYIYPGA---PRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
398-806 |
2.37e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 101.39 E-value: 2.37e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 398 TFDVEINDFGSMVNDLKLARSFGDVDVTFGYYMADQTISMSWLWNSYLMALKGNNAELLNVNAADGTAFSEQGQLAYGVP 477
Cdd:pfam00593 66 GYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLD 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 478 F-------------WGNCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSrdmnndgaisqi 543
Cdd:pfam00593 146 YrrldddaydpydpANPSSSSYSDTTTDSYGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGGDN------------ 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 544 eqsvsgidlanpqlVNYSWGYNSYSAGANYQFNRDWAMFGRISKGARA-NADRLLFGKVNADGSVAREDAID----EVKQ 618
Cdd:pfam00593 214 --------------FSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRApSLGELYGSGSGGGGGAVAGGNPDlkpeTSDN 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 619 YEIGSKSRHGNLNLFATLFFAE-TDEQNFEATTQLFFDRVY--------KAKGIELESSYRI-GDFDFRGSVTFTDAEis 688
Cdd:pfam00593 280 YELGLKYDDGRLSLSLALFYIDiKNLITSDPDGPGLGGTVYtytnvgkaRIRGVELELSGRLwGLGLSGGGYTYTDAD-- 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 689 sDALNPDVVGNTPRRQADMIYSLLARYTMDN----AQVGISLVGTTDSYAQD-NNDLKFSGYTQLNAFANYELAENLTLS 763
Cdd:pfam00593 358 -DDADADDTGNPLPNVPRHTANLGLTYDFPLggwgARLGARYVGSGERRYGDaANTFKTPGYTLVDLSAGYRLNKNLTLR 436
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 518505941 764 LNVNNLFDtigiTEAEQGSVPENGIITARTINGRTASVGLRYQ 806
Cdd:pfam00593 437 LGVNNLFD----KYYKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
87-771 |
1.27e-12 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 71.37 E-value: 1.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 87 EIFRMLPGVRSESTGGEGNAN-IAVRGLPVAAGGAkFLtlqeDGLPVLQFGdiaFGNADIfvraDSTM-ARLDVIRGGSA 164
Cdd:PRK14050 102 EALRYTPGVLSQPFGTDGDTDwFYIRGFDATQTGV-FL----DGLNLFSYG---FGGFQI----DPFMlERVEVLKGPAS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 165 STAASNSPGGIINFISK--TGE-HQGGSIAISsglNYDQFRTDFEFGGDINND--MRFHFGGFVRQGEGVRDpGYQGERG 239
Cdd:PRK14050 170 VLYGGSNPGGIVNMVSKrpLDEpLYYTEIGIN---SYGNAFTGFDVGDKLSDDgtVRYRVTGKVAGGDNYSD-YSEDLRG 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 240 YqIKANVTKEFSAGY---VRVYAKHLNDRAASYMPMPMYADGSSVPGYDAQKDtlqsvyltqtvRLNGDNQISRGDVRNG 316
Cdd:PRK14050 246 F-IMPQITYAPDDATsltVYGYLSGLDQVHVGNGFLPYVGTVVDAPFGKIDRD-----------AFYGEPDIDNGSYAQQ 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 317 MnpkvdsFGIEAQFDLDENWTLDNRFRISDVSGNFITLFP-AEVGNAQGIADSIAGNNSTLTYAVGPQAGQNYTAADAMR 395
Cdd:PRK14050 314 M------LGYEFSHEFDNGWTFSQNARYGHLHKHEKGPYTyGYVGGATGLPDPTGPDYMLNRIGFEHRSKVDSFSIDNRL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 396 IHTFDVeindfGSMVNDLKLArsfgdvdVTFGYYMADQtismswlwnsyLMALKGNNAellnVNAADGTafseqgqlaYG 475
Cdd:PRK14050 388 EGEFDT-----GALTHNLLFG-------LDYKYYRLDQ-----------VQACCGATP----ISATNPV---------YG 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 476 VPFWGNCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGtyAGASQSSRDmNNDGAISQieqsvsgidlan 554
Cdd:PRK14050 432 TTQGANFVYLDQILTQQQIGIYAQDQIRFGDgWLVTLNGRYDYVDTDS--DARIGTSYE-SNDGALSG------------ 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 555 pqlvnyswgynsySAGANYQFnrDWAMFGRISKGARANAdrlLFGkVNADGSVAREDaidEVKQYEIGSKSRHGNLN--L 632
Cdd:PRK14050 497 -------------RAGLAYEF--DNGLTPYVSAATFFNP---LVG-TLASGPPLKPE---EGEQYEAGIKYEPSFIDglI 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 633 FATLFfaETDEQNFEATTQLFFDRV----YKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDAlNPDVVGNTPRRQADM 707
Cdd:PRK14050 555 TASVF--QITKKNVTVTDPLTFASTqlgeVRSRGFELEGKVNLDDnWKALASFTYTDLEITEDA-NPSLIGNSPYLVPET 631
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 518505941 708 IYSLLARYTM-DNAQVGISLVGTT----DSYAQDNNDLKFSGYTQLNAFANYElAENLTLSLNVNNLFD 771
Cdd:PRK14050 632 QASLWLDYAVtDGAFEGVSLGAGVryqgESWADEANTLKVPAATLFDAAIRYE-KNDWGASLNVANLFD 699
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
75-807 |
1.04e-47 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 180.07 E-value: 1.04e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 75 EDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLPVAAGgakfltLQEDGLPvlqfgDIAFGNADIFvradsTMA 154
Cdd:COG4774 19 ELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFSASGD------IYVDGLR-----DPGQYRRDTF-----NLE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 155 RLDVIRGGSASTAASNSPGGIINFISKT-GEHQGGSIAISSGlNYDQFRTDFEFGGDINNDMRFHFGGFVRQGEGVRDPG 233
Cdd:COG4774 83 RVEVLKGPASVLYGRGSPGGVINLVTKRpTDEPFTEVTLTYG-SDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 234 YQgeRGYQIKANVTKEFSAGY-VRVYAKHLNDRAASYMPMPMYADGSSVPgydaqkdtlqsvyltqtvrLNGDNQIsrGD 312
Cdd:COG4774 162 DN--DRWGIAPSLTWRLGDRTrLTLDYEYQDDDRTPDYGVPAVANGRPVD-------------------VDRSTFY--GQ 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 313 VRNGMNPKVDSFGIEAQFDLDENWTLDNRFRISDVSGNFITlfpaevgnaqgiadsiagnnstlTYAVGPQAGQNYTAAD 392
Cdd:COG4774 219 PDDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRN-----------------------TYPTGGNATGTVTRSA 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 393 AMRIHTFDVEINDfgsmvNDLKLARSFGDVDVTFgyymadqTISMSWLWNSYLMALKGNNAELLNVNAADGTafseqgql 472
Cdd:COG4774 276 YRRDQDNDTLSNQ-----TDLTGKFDTGGVKHTL-------LAGVEYSREDSDNARYSGGGTAPTVNLYNPV-------- 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 473 aYGVPFWG-NCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDmnndgaisqieqsvsgi 550
Cdd:COG4774 336 -YGAPVTGpTLGGADNDSRTDTTGLYLQDTISLTDrWSLLAGLRYDRFDTDYTDRTTGATTSS----------------- 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 551 dlanpqlvnYSWGYNSYSAGANYQFNRDWAMFGRISKGARANADrlLFGKVNADGSVAREDAidevKQYEIGSKS--RHG 628
Cdd:COG4774 398 ---------YDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGG--APSLSNAGQALDPEKS----RQYEVGVKWdlLDG 462
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 629 NLNLFATLFFAE-TDEQNFEATTQLFFDRV--YKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDAlNPDVVGNTPRRQ 704
Cdd:COG4774 463 RLSLTAALFRIEkTNVRTTDPANPGVYVQTgeQRSRGVELEATGELTPgWSVLAGYTYLDAEITKSA-NAANVGNRLPNV 541
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 705 ADMIYSLLARY--TMDNAQVGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTIGITEAeqgs 782
Cdd:COG4774 542 PRHSASLWTTYdlPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASA---- 617
|
730 740
....*....|....*....|....*
gi 518505941 783 vpeNGIITARTINGRTASVGLRYQF 807
Cdd:COG4774 618 ---YGSGYVTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
17-807 |
1.06e-42 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 165.84 E-value: 1.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 17 LAISSTTAIAQQTDNENDVAAEASASTGlgfERILVTGAVSRNQSVMQSSVSVST---------------LTFEDIDVSS 81
Cdd:COG4773 5 LAGSGLAAAAAGALAQAAAAAAAEATTL---PEVTVTGTAEGTGGYTAKSSSTATkldtplretpqsvsvVTRQLIEDQG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 82 PRSTAEIFRMLPGVRSESTGGEGNANIAVRGLPVAaggakflTLQEDGLPVLQFGDIAFGNADIfvradstmARLDVIRG 161
Cdd:COG4773 82 ATTLDDALRNVPGVTVSSYDGGGRDSFSIRGFSID-------NYLRDGLPLGGFGGGQPDTANL--------ERVEVLKG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 162 GSASTAASNSPGGIINFISKT-GEHQGGSIAISSGlNYDQFRTDFEFGGDINND--MRFHFGGFVRQGEGVRDpGYQGER 238
Cdd:COG4773 147 PAGLLYGAGSPGGLVNLVTKRpTAEPQGEVSLSAG-SWDTYRATADVGGPLNEDgtLRYRLNAAYEDGDSFRD-GVDNRR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 239 G-------YQIKANVTKEFSAGYvrvyakhlndraasympmpMYADGSSVPGYDAQKDTLqsVYLTQTVRLNGDNqisrg 311
Cdd:COG4773 225 TliapsldWDLTDDTTLTLGAEY-------------------QDDDSTGDRGFLPLDGTL--LDLPRSTNLGEPW----- 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 312 dvrNGMNPKVDSFGIEAQFDLDENWTLDNRFRISDVSGNFITLFPAEVGNAqgiadsiagNNSTLT-YAVGPQAGQNYTA 390
Cdd:COG4773 279 ---DYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDA---------ATGTLTrYASARDGDSRSDS 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 391 ADAMRIHTFDveindFGSMVNDLklarsfgdvdvTFGYYMADQTISMSWlwnsylmalkgNNAELLNVNAADGTAFSEqg 470
Cdd:COG4773 347 LDANLNGKFE-----TGGLEHTL-----------LVGADYSRYDSDSDS-----------ATAGTINIYNPVYGNLPE-- 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 471 qlaygvPFWGNccqRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDmnNDGAISqieqsvsg 549
Cdd:COG4773 398 ------PDFDA---SDTDTTTRQTGLYAQDQISLTDrLSLLLGGRYDWYETDSTNRLGGSTTSY--DDSAFT-------- 458
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 550 idlanpqlvnyswgynsYSAGANYQFNRDWAMFGRISKGARANADRllfgkvNADGSVAreDAIdEVKQYEIGSKSRHGN 629
Cdd:COG4773 459 -----------------PRAGLVYDLTPGLSLYASYSESFEPQSGA------DNNGNPL--DPE-TGKQYEAGVKGELFD 512
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 630 LNLFATLFFAETDEQNFeATTQLFFDRVYKA------KGIELESSYRIGD-FDFRGSVTFTDAEISSDALNPD--VVGNT 700
Cdd:COG4773 513 GRLNATLAVFDITQKNV-ATTDPDNPNFYVQvgevrsRGVELELSGELTPgLNLIAGYTYTDAKITKDADALEgkRLTNV 591
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 701 PRRQAdmiySLLARYTMDNAQ-----VGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTIGI 775
Cdd:COG4773 592 PRHTA----SLWTTYRFPSGAlkglgLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYY 667
|
810 820 830
....*....|....*....|....*....|..
gi 518505941 776 TEAeqgsvpeNGIITARTINGRTASVGLRYQF 807
Cdd:COG4773 668 ASS-------GSRGYVYYGAPRNVRLSLSYKF 692
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
75-772 |
6.53e-40 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 156.91 E-value: 6.53e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 75 EDIDVSSPRSTAEIFRMLPGVRSESTGGeGNANIAVRGLPVAAGGAKFLTlqeDGLPVlqfGDIAFGNADIFVRADSTMA 154
Cdd:COG1629 28 EQLEDQPATDLGDLLRRVPGVSVTSAGG-GAGQISIRGFGGGGNRVLVLV---DGVPL---NDPSGGDGGLSYIDPEDIE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 155 RLDVIRGGSASTAASNSPGGIINFISKTGEH-QGGSIAISSGlNYDQFRTDFEFGGDiNNDMRFHFGGFVRQGEGVRDPG 233
Cdd:COG1629 101 RVEVLRGPSSALYGSGALGGVINIVTKKPKDgKGGEVSASYG-SYGTYRASLSLSGG-NGKLAYRLSASYRDSDGYRDNS 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 234 YQgeRGYQIKANVTKEFS-AGYVRVYAKHLNDRaasympmpmyadgssvpgYDAQKDTLQSVYLTQTVRLNGDNQISRGD 312
Cdd:COG1629 179 DS--DRYNLRAKLGYQLGdDTRLTLSASYSDSD------------------QDSPGYLTLAALRPRGAMDDGTNPYSNDT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 313 VRNgmnpKVDSFGIEAQFD-LDENWTLDNRFRISDVSGNFitlfpaevgnaqgiadsiaGNNSTLTYAVGPQAGQNYTAa 391
Cdd:COG1629 239 DDN----TRDRYSLSLEYEhLGDGLKLSASAYYRYDDTDL-------------------DSDFTPTPADGGTLEQTDFD- 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 392 damrihtfdveiNDFGSMVNDLKLARSFGD-VDVTFGYYMADQTISMSWLWNSYLMALKGNNAEllnvnaadgtafseqg 470
Cdd:COG1629 295 ------------NRTYGLELRLTYDLGFGGkHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTS---------------- 346
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 471 qlaygvpfwgnccQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDmnndgaisqieqsvsg 549
Cdd:COG1629 347 -------------GADDDGTTTSLALYAQDTYKLTDkLTLTAGLRYDYVSYDVDDTVTGTDSAS---------------- 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 550 idlanpqlVNYSWGYNSYSAGANYQFNRDWAMFGRISKGARANADRLLFGKVNADGSVAREDAIDE-VKQYEIGSKSRH- 627
Cdd:COG1629 398 --------GSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPYSVGNPDLKPEtSTNYELGLRYRLl 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 628 -GNLNLFATLFFAETDeqNFEATTQLFFDRVY----------KAKGIELESSYRIGD-FDFRGSVTFTDAEISSD-ALNP 694
Cdd:COG1629 470 dGRLSLSLALFYSDVD--NEILSVPLPNDSGFstyytnagkaRSYGVELELSYQLTPgLSLNASYSYTDAKFDDDtDGSA 547
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 695 DVVGNTPRRQADMIYSLLARYT-MDNAQVGISLVGTTDSYAQDNNDLKF-SGYTQLNAFANYELAENLTLSLNVNNLFDT 772
Cdd:COG1629 548 DLDGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDRYLDDANTQGApGGYTLVDLGAGYRFGDNLTLSLGVDNLFDK 627
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
75-807 |
2.87e-36 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 145.67 E-value: 2.87e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 75 EDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLpvaagGAKFLTLQEDGLPVLQFGDIAFGNADIFvraDSTMA 154
Cdd:cd01347 8 EDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGF-----GPDRTLVLVDGLPLASSNYGRGVDLNTI---PPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 155 -RLDVIRGGSASTAASNSPGGIINFISKTGEHQ-GGSIAISSGLN--YDQFRTDFEFGGDI--NNDMRFHFGGFVRQGEG 228
Cdd:cd01347 80 eRVEVLKGPSSALYGSGAIGGVVNIITKRPTDEfGGSVTAGYGSDnsGSSGGGGFDVSGALadDGAFGARLYGAYRDGDG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 229 VRDPGYQGER------------GYQIKANVTKEFSAGYvrvyAKHLNDRAasYMPMPMYADGSSVPGydaqkdtlqsvyl 296
Cdd:cd01347 160 TIDGDGQADDsdeerynvagklDWRPDDDTRLTLDAGY----QDQDADGP--GGTLPANGTGSSLGG------------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 297 TQTVRLNGDNQISRGDVRNGMNpkvdSFGIEAQFDlDENWTLDNRFRISDVSGNFITLFPAEVGNAQGIADSIAGNNSTL 376
Cdd:cd01347 221 GPSSNTNGDRDWDYRDRYRKRA----SLGLEHDLN-DTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSER 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 377 TYavgpqagqnytaadamRIHTFDVEINdfgsmvndlklaRSFGDVDVTFgyymadqtismswlwnsylmalkgnnaell 456
Cdd:cd01347 296 DT----------------TQLGFDAGLN------------APFGTGPVAH------------------------------ 317
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 457 nvnaadgtafseqgQLAYGVPFwgnccqRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSRDMN 535
Cdd:cd01347 318 --------------TLTLGVEY------RREELDEKQTALYAQDTIELTDdLTLTLGLRYDHYDQDSKDTIAGGTTAKKS 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 536 NDgaisqieqsvsgidlanpqlvnyswgYNSYSAGANYQFNRDWAMFGRISKGARANADRLLFGKVNADGSVARED---A 612
Cdd:cd01347 378 YS--------------------------HWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGNpnlK 431
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 613 IDEVKQYEIGSKSRHGN-LNLFATLF--------FAETDEQNFEATTQLFFDRVYKAKGIELESSYRIGD-FDFRGSVTF 682
Cdd:cd01347 432 PEKSKQYELGLKYDPGDgLTLSAALFridikneiVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDgLGLTGSYTY 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 683 TDAEISSDALNPDvvGNTPRRQADMIYSLLARYTMDNAQVGISLVGT-----TDSYAQDNNDLKFSGYTQLNAFANYELA 757
Cdd:cd01347 512 TDTEVKRTDGATT--GNRLPGIPKHTANLGLDYELPDEGLTAGGGVRyrgkqYADTANGNNTVKVPGYTLVDLSASYQFT 589
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 518505941 758 ENLTLSLNVNNLFDTigiTEAEQGSVPENGIITArTINGRTASVGLRYQF 807
Cdd:cd01347 590 KNLTLRLGVNNLFDK---DYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
35-807 |
2.56e-35 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 143.14 E-value: 2.56e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 35 VAAEASASTGLgfERILVTGAVSRNQSVMQSSVSVSTLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGNA-NIAVRGL 113
Cdd:COG4772 13 AAAAAEAATTL--ETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFGLRpNIGIRGL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 114 PvaAGGAKFLTLQEDGLPVlQFGDIAFGNADIFVRADStMARLDVIRGGSASTAASNSPGGIINFISKTGEHQGGSIAIS 193
Cdd:COG4772 91 G--PRRSRGITLLEDGIPI-APAPYGDPAAYYFPDLER-MERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELRV 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 194 SGLNYDQFRTDFEFGGDINNdmrfhFGGFV----RQGEGVRDP-GYQGER-----GYQIKANVTKEFSAGYVRVYAKhln 263
Cdd:COG4772 167 TGGSFGYRRTHASVGGTVGN-----FGYLVeysrKRGDGFRDNsGFDINDfnaklGYRLSDRQELTLKFQYYDEDAN--- 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 264 draasympmpmyadgssVPGY--DAQKDtlqsvyltqtvrlngDNQISRGDVRNGMNPKVDSFGIEAQFDLDENWTLDNR 341
Cdd:COG4772 239 -----------------TPGGltDAQFD---------------ADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTT 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 342 FRISDVSGNFitLFPAEVGNAQGIADSIAGNNSTL-TYAVGPQAGQNYTAADAmrihtfdveindfgsmvndlklarsfg 420
Cdd:COG4772 287 AYYNDFSRNW--YIRQNTADPNTPGLGLRGNPRGYrSYGIEPRLTHRFELGGV--------------------------- 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 421 DVDVTFGY-YMADQTISMSWlWNSYLMALKGNNAellnvnaadgtafseqgqlaygvpfwgnccQRNYDTQYSTTAPYIN 499
Cdd:COG4772 338 PHTLEVGLrYHREEEDRKQY-VNTYGQGRSGAGL------------------------------RRDRRFSADALAAYAQ 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 500 VGWAF-GDWSLDASVRrdngkatgtYAGASQSSRDMNNDGAISQIEQSVSgIDLANPqlvnyswgynsySAGANYQFNRD 578
Cdd:COG4772 387 NRFELtGRLTLTPGLR---------YEHIRRDRTDRYSTRTGGDDSGSNS-YSEFLP------------GLGLLYQLTDN 444
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 579 WAMFGRISKGARANADRLLFGKVNADGSVAREDAidevKQYEIGSKSRHGNLNLF-ATLFFAETDEQNFEATTQLFFDRV 657
Cdd:COG4772 445 LQLYANVSRGFEPPTFGDLAYGNGGNPDLKPEKS----WNYELGTRGRIGNGLSAeVALFYIDYDNELGSCSAAGGDRST 520
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 658 YKA------KGIELESSYRIG-----DFDFRGSVTFTDAEISSDAlNPDVVGN----TPRRQadmiYSLLARYTMDNAQV 722
Cdd:COG4772 521 FTNagetrhQGLELALDYDLLkggglGLPLFAAYTYTDAEFTSDF-GPVFAGNrlpyVPRHQ----LTAGLGYEHGGWTA 595
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 723 GISLVGTTDSYAQDNNDLKF------SGYTQLNAFANYELAENLTLSLNVNNLFDTIGITeaeqgSVPENGIITARTING 796
Cdd:COG4772 596 NLNGRYVSEQFTDAANTVADgsfgkiPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIA-----SRAPNYAAGIRPGPP 670
|
810
....*....|.
gi 518505941 797 RTASVGLRYQF 807
Cdd:COG4772 671 RTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
71-807 |
3.22e-24 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 108.27 E-value: 3.22e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 71 TLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGN-ANIAVRGLPVAAGGAKFLTlqeDGLPVLqfgdiafGNADIFVRA 149
Cdd:TIGR01783 8 VITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfGNITIRGFGLEVDIDNVYL---DGVPLL-------SRGNLAIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 150 DSTMARLDVIRGGSASTAASNSPGGIINFISKTG-EHQGGSIAISSGlNYDQFRTDFEFGGDINNDmrFHFGGFV----R 224
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPqDEPKGSVTFGAG-TRSGYRTAFDLGGPLGAD--GTFRGRLngarQ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 225 QGEGVRDpgYQGER--------GYQIKANVTKEFSAGYvRVYAKHLNDRAASYMPmpmyadgsSVPGYDAQKDTLQSvyl 296
Cdd:TIGR01783 155 DGDSFYD--GAGEEtrlgatatDWQLDDRTLLRLGAYY-QKERDRGGYGGLPASG--------GTSGRDLSSDRYLG--- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 297 TQTVRLNGDNQISRGdvrngmnpkvdsfGIEAQFDLDENWTLDNRFRISDVSGNFITLFPAEVGNAQGIADSIAGNNSTL 376
Cdd:TIGR01783 221 TSSNRNYDDREYLSY-------------GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVK 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 377 TYAVGPQAGQNytaadaMRIHTFDVEIndfgsmvndlklarsfgdvdvTFGYYMADQTISMSWLWNSYLMALKGNNAELL 456
Cdd:TIGR01783 288 QDRVQIDAGLD------GEFETGPIEH---------------------DLLLGVSYGQRTTNRFNNTGYPSDNIYSLTAT 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 457 NVNAADGTAFSEQGQLaygvpfwgnccqrnYDTQYSTTAPYINVGWAFGDWSLDASVRRDNGKatgtyagasqssRDMNN 536
Cdd:TIGR01783 341 SSARTDIGDSPKDRAL--------------SSTTKALNGVALQRILLADKWTLTLGGRYDSVD------------VKSNN 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 537 DGAISQIEQSVSgidlanpqlvNYSWgynsySAGANYQFNRDWAMFGRISKGARANADRLLFGKVNADGSVAredaiDEV 616
Cdd:TIGR01783 395 GVAGSTGKRDDS----------QFTP-----SLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEP-----EKG 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 617 KQYEIGSKSRHGNLNLF-ATLF---FAETDEQNFEATTQLFFDRVYKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDA 691
Cdd:TIGR01783 455 KNYELGVRYDLGDSLLAtAALFritKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPgLSLSAGYTYTDAEFTEDT 534
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 692 lNPDVVGNTPRRQADMIYSLLARY---TMDNA-QVGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELA--ENLTLSLN 765
Cdd:TIGR01783 535 -NGDTQGNTVPFVPKHTASLWASYappVGDNGlTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTkkKNLTLALN 613
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 518505941 766 VNNLFDTIGITEAEQGSvPENGIITARtinGRTASVGLRYQF 807
Cdd:TIGR01783 614 VNNLFDRDYYTSGYRWG-PSAYIYPGA---PRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
398-806 |
2.37e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 101.39 E-value: 2.37e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 398 TFDVEINDFGSMVNDLKLARSFGDVDVTFGYYMADQTISMSWLWNSYLMALKGNNAELLNVNAADGTAFSEQGQLAYGVP 477
Cdd:pfam00593 66 GYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLD 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 478 F-------------WGNCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGTYAGASQSSrdmnndgaisqi 543
Cdd:pfam00593 146 YrrldddaydpydpANPSSSSYSDTTTDSYGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGGDN------------ 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 544 eqsvsgidlanpqlVNYSWGYNSYSAGANYQFNRDWAMFGRISKGARA-NADRLLFGKVNADGSVAREDAID----EVKQ 618
Cdd:pfam00593 214 --------------FSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRApSLGELYGSGSGGGGGAVAGGNPDlkpeTSDN 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 619 YEIGSKSRHGNLNLFATLFFAE-TDEQNFEATTQLFFDRVY--------KAKGIELESSYRI-GDFDFRGSVTFTDAEis 688
Cdd:pfam00593 280 YELGLKYDDGRLSLSLALFYIDiKNLITSDPDGPGLGGTVYtytnvgkaRIRGVELELSGRLwGLGLSGGGYTYTDAD-- 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 689 sDALNPDVVGNTPRRQADMIYSLLARYTMDN----AQVGISLVGTTDSYAQD-NNDLKFSGYTQLNAFANYELAENLTLS 763
Cdd:pfam00593 358 -DDADADDTGNPLPNVPRHTANLGLTYDFPLggwgARLGARYVGSGERRYGDaANTFKTPGYTLVDLSAGYRLNKNLTLR 436
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 518505941 764 LNVNNLFDtigiTEAEQGSVPENGIITARTINGRTASVGLRYQ 806
Cdd:pfam00593 437 LGVNNLFD----KYYKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
71-807 |
1.39e-17 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 87.47 E-value: 1.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 71 TLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLpvaagGAKFLTLQEDGLP-VLQFGDIAFGNADIFVRA 149
Cdd:TIGR01786 27 VISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGGSQGINIRGL-----DKNRVAVLVDGIRqNTSYGGQGSTFYAINSID 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 150 DSTMARLDVIRGGSASTAASNSPGGIINFISKT-------GEHQGGSIAISSGLNydqfrtdfefggdiNNDMRFHFGGF 222
Cdd:TIGR01786 102 PELIKSIEIVKGASSSLYGSGALGGVVAFRTKDaadllkpGKDLGGLSKLGYSSA--------------NNRFTQSVAAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 223 VRQGegvrdpgyqgergyqikaNVTKEFSAGYvrvyaKHLNDraasympmpmyadgssvpgYDAQKDTlqsvyltqtvrl 302
Cdd:TIGR01786 168 GRND------------------DVDALVQATY-----RRGHE-------------------LKNGNKA------------ 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 303 NGDNQISRGDVrNGMNPKVDSFGIEAQFDLDENWTLDNRFRISDVSGNfitlfpaEVGNAQGIADSIAGNNSTLTYAVGP 382
Cdd:TIGR01786 194 NIGNESKRSKP-NPSDYKSQSFLAKLGWQLNDAHRLGLSLEYTQTDYD-------EPEMTNTSYLTKPLGAPLLSSTVVL 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 383 QAGQNYtaadaMRIHTFDVEINDFGSMVNDLKLARSFGDVDVTFGYYMADQTISMswlWNSYLMALK-GNNAELLNVNAA 461
Cdd:TIGR01786 266 GDSKTR-----DRRTGLDYELNPDNSWLDTVKLALDKQYIQLYNYLNATSASDYP---GVDKNGRYKdKYDYYTLGFDTN 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 462 DGTAFSEQGQ-LAYGV---------PFWGNCCQRNYDTQYSTTAPYINVG-----------WAFGDW-SLDASVRRDNGK 519
Cdd:TIGR01786 338 NKIEFSVHSLsLTYGLdrfkdkvstGDSRRNLPTAAYNLYGYEGENRPVKgsnfglflqdnIKLGDWlSLSAGLRYDHYK 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 520 ATGtyagasqSSRDMNNDGAISqieqsvsgidlanpqlvnYSWGYNSYSAGANYQFNRDWAMFGRISKGARA-NADRLLF 598
Cdd:TIGR01786 418 TDP-------KADESKDYGAIS------------------KTYSRWSPSLGLTYKPTPWLTLYYSYSQGFRApSFDELYG 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 599 GKVNADGSVAR---------EDAidevKQYEIGSKSRHGNLNLFATLFfaETDEQNFEATTQLFFDRVYKA--------- 660
Cdd:TIGR01786 473 TGAHPGGGPYTflpnpnlkpETS----KNWEIGINLHFDQLDFKVSYF--RNDYKDFIDLGIGVTAKGNMAqvgsntitn 546
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 661 ---------KGIELESSYRIGDFDF--------------RGSVTFTDAEIssDALNPD-VVGNTPRRQADMIYSLLARYT 716
Cdd:TIGR01786 547 yvnidnariRGIELSGRYDLGSFFSgpdgwtttlkygytKGKDSDTNPWL--NAITPLkVVLGLGYDHPDEKWGVGLTLT 624
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 717 MDNAQ--VGISLVGTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTIGITEAEQGSVPENGiiTARTI 794
Cdd:TIGR01786 625 FSGAKdaVDAYATYYENGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKYTTWESARQAGPLA--TGYTA 702
|
810
....*....|...
gi 518505941 795 NGRTASVGLRYQF 807
Cdd:TIGR01786 703 PGRNYKASVEYKF 715
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
14-763 |
3.65e-17 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 85.68 E-value: 3.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 14 AVSLAISSTTAIAQQTDNENDVAAEAsastglgFERILVTGAvSRNQSVMQSSVSVSTLTFEDIDVSSPRSTAEIFRMLP 93
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATE-------LEEVVVTAT-RTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 94 GVRSESTGGEGNAN-IAVRGLpvaaGGAKFLTLQeDGLPVlqfGDIAFGNADIFVRADSTM-ARLDVIRGGSASTAASNS 171
Cdd:COG4771 73 GVSVTRSGGRGGSSgISIRGL----GGDRVLVLI-DGVPV---NNPALGGGGDLSYIPPDDiERIEVIRGPASALYGSDA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 172 PGGIINFISKTGEHQG-GSIAISSGLNYD-QFRTDFEFGGDiNNDMRFHFGGFVRQGEGVRDPGYQGERGYqikanvtke 249
Cdd:COG4771 145 IGGVINIITKKPTDELeGSVSLGYGSNGNgTYSGSLSLGGP-GDKLSFLLSGSYRDRDGYLDYRNGGFVGN--------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 250 fsagyvrvyakhlndraasympmpmyadgssvPGYDAQkdtlqsvyltqtvrlngdnqisrgdvrngmnpkvdSFGIEAQ 329
Cdd:COG4771 215 --------------------------------SGYERY-----------------------------------NLNAKLG 227
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 330 FDLDENWTLDNRFRISDVSGnfitlfpaevgnaqgiadsiagnnstltYAVGPQAGQNYTAADAMRIHTFDVEINDFGsm 409
Cdd:COG4771 228 YRLSDNHRLSLSGGYSRQDR----------------------------DGGPPTLGDTEISSDNAGDRDTTTDRGNYS-- 277
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 410 vndLKLARSFGD-VDVTFGYYMADQTiSMSWLWNSYLMALKGNNAELLNVNAADGTAFSEQGQLAYGVPFW-----GNCC 483
Cdd:COG4771 278 ---LRYNGDLGDnLDLSLYYSRTDRD-STNGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNHTLTLGAEYRyddldSSSF 353
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 484 QRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNgkatgtyagasQSSRDMNNDGAIsqieqsvsgidlanpqlvnysw 562
Cdd:COG4771 354 LGGADASRDTYGLFAQDEWKLTDkLTLTAGLRYDY-----------YSTFGASNYTAF---------------------- 400
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 563 gynSYSAGANYQFNRDWAMFGRISKGARA--NADRLLFGKVNADGSVAREDAID--EVKQYEIGSKSRHGNLNLFATLFF 638
Cdd:COG4771 401 ---SPRLGLRYDLSDNLTLRASYGRGFRApsLAELYGSGTGTPGRYVLGNPDLKpeTSDNYELGLEYRLGNGGLSLSLTG 477
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 639 AETDEQNF--------EATTQLFFDRVYKA--KGIELESSYRIGD-FDFRGSVTFTDAEISSDALNPDvVGNTPRRQAdm 707
Cdd:COG4771 478 FYTDIKDLivlvpvgpGPGDVLQYENVGKArtYGLELELKYRLGKgLTLTASYTYLDSKIDDGDTGEP-LPNVPPHKA-- 554
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 708 iySLLARYTMDNAQVGISLV----GTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLS 763
Cdd:COG4771 555 --NLGLDYRLPKWWLLLLLTryygGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
47-807 |
9.37e-15 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 78.20 E-value: 9.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 47 FERILVTGAVSRNQSVMQSSVSVsTLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLpvaagGAKFLTLQ 126
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVS-VISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGL-----QDNRVLVV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 127 EDGLPvlQFGDIAFGNADIFVRADSTMARLDVIRGGSASTAASNSPGGIINFISKT-------GEHQGGSIAISSGLNYD 199
Cdd:TIGR01785 75 VDGAR--QNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDaadllrpGQLFGGLAKLSYGSNNN 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 200 QFRTDFEFGGDINNDMRFHFGGFVRQGEGVRdPGYQGERGYQikANVTKEFSA-GYVRVYAKHLNDRAASYmpmpmyadg 278
Cdd:TIGR01785 153 SFGGSVAVAGRLDDNLDALVAATYRDGGNYR-NGNKEEATNS--AYVQKNLLAkLGWQLDDAQRLEFSYFT--------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 279 ssvpgYDAQKDTLQSVYLTQTVRLNGDNQISRGDVRNgmnpkvDSFGIEAQFDLDENWTLDNRFrisdvsgnfitlfpae 358
Cdd:TIGR01785 221 -----TEGSLDEAQNSGPGTEYVLGSSSTLLASSTRD------RSATLTYNWTPEDNPWLDATA---------------- 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 359 vgnaqgiadSIAGNNstlTYAVGPQAGQNYTAADAMRIHTFDVEINDfGSMVNDLKLARSFGDVDvtfgyYMADQTISMS 438
Cdd:TIGR01785 274 ---------SLYYNR---TENDNDRSARGVGREEGYQYTTYGATLQN-TSRFDVASWSTLTYGVD-----WMKDKRRTES 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 439 WlwnsylmalKGNNAELLNVNAADGTAFSEQGQLAYGVPFWGnccqrnydtqysttapyinvgwafGDWSLDASVRRDNG 518
Cdd:TIGR01785 336 F---------DPNSVTTIVPNPPSAKEYFFGLFLQDNIPLLD------------------------DRLTLSAGLRYDHY 382
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 519 KATG-TYAGASQSSRDmnnDGAISQieqsvsgidlanpqlvnyswgynsySAGANYQFNRDWAMFGRISKGARA-NADRL 596
Cdd:TIGR01785 383 KLSPkTTADTEAVDRS---YSRWSP-------------------------SLGLSYKPVDWLTLYASYSQGFRApSIDEL 434
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 597 LFGKVNADGS-----VAREDAIDEV-KQYEIGSKSRHGN-------LNLFATLFFaeTDEQNFEATTQLFFDRV------ 657
Cdd:TIGR01785 435 YGTGDHPGTPggytfAPNPNLKPETsKTWELGANLSFDNllldndqLQFKVAYFY--NDVKDFIDLTIGVTDNVtagmnn 512
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 658 ---------YKAKGIELESSYRIGDFDFRGSVTFTDAEISS-----DALNPD---VVGNTPRRQADMIYSLLARYTMDNA 720
Cdd:TIGR01785 513 itqyvnidgARIRGIEASASYDAGLWATGLSYGYTIGKDQNtnqwlSNIPPLklvVTVGYRFPDRRLDLGAKAAYYERQS 592
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 721 QVGISLVGTTdsyaqdNNDLKFSGYTQLNAFANYELAE--NLTLSLNVNNLFDTIGIteaeqgsvPENGIITARTinGRT 798
Cdd:TIGR01785 593 ESPTTEDVAA------NGLLTTPGYTVVDLYATYQPNAvkGLTVRFGVNNLTDRKYT--------PAQSVPGAGP--GRN 656
|
....*....
gi 518505941 799 ASVGLRYQF 807
Cdd:TIGR01785 657 FKGSVKYQF 665
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
87-771 |
1.27e-12 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 71.37 E-value: 1.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 87 EIFRMLPGVRSESTGGEGNAN-IAVRGLPVAAGGAkFLtlqeDGLPVLQFGdiaFGNADIfvraDSTM-ARLDVIRGGSA 164
Cdd:PRK14050 102 EALRYTPGVLSQPFGTDGDTDwFYIRGFDATQTGV-FL----DGLNLFSYG---FGGFQI----DPFMlERVEVLKGPAS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 165 STAASNSPGGIINFISK--TGE-HQGGSIAISsglNYDQFRTDFEFGGDINND--MRFHFGGFVRQGEGVRDpGYQGERG 239
Cdd:PRK14050 170 VLYGGSNPGGIVNMVSKrpLDEpLYYTEIGIN---SYGNAFTGFDVGDKLSDDgtVRYRVTGKVAGGDNYSD-YSEDLRG 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 240 YqIKANVTKEFSAGY---VRVYAKHLNDRAASYMPMPMYADGSSVPGYDAQKDtlqsvyltqtvRLNGDNQISRGDVRNG 316
Cdd:PRK14050 246 F-IMPQITYAPDDATsltVYGYLSGLDQVHVGNGFLPYVGTVVDAPFGKIDRD-----------AFYGEPDIDNGSYAQQ 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 317 MnpkvdsFGIEAQFDLDENWTLDNRFRISDVSGNFITLFP-AEVGNAQGIADSIAGNNSTLTYAVGPQAGQNYTAADAMR 395
Cdd:PRK14050 314 M------LGYEFSHEFDNGWTFSQNARYGHLHKHEKGPYTyGYVGGATGLPDPTGPDYMLNRIGFEHRSKVDSFSIDNRL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 396 IHTFDVeindfGSMVNDLKLArsfgdvdVTFGYYMADQtismswlwnsyLMALKGNNAellnVNAADGTafseqgqlaYG 475
Cdd:PRK14050 388 EGEFDT-----GALTHNLLFG-------LDYKYYRLDQ-----------VQACCGATP----ISATNPV---------YG 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 476 VPFWGNCCQRNYDTQYSTTAPYINVGWAFGD-WSLDASVRRDNGKATGtyAGASQSSRDmNNDGAISQieqsvsgidlan 554
Cdd:PRK14050 432 TTQGANFVYLDQILTQQQIGIYAQDQIRFGDgWLVTLNGRYDYVDTDS--DARIGTSYE-SNDGALSG------------ 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 555 pqlvnyswgynsySAGANYQFnrDWAMFGRISKGARANAdrlLFGkVNADGSVAREDaidEVKQYEIGSKSRHGNLN--L 632
Cdd:PRK14050 497 -------------RAGLAYEF--DNGLTPYVSAATFFNP---LVG-TLASGPPLKPE---EGEQYEAGIKYEPSFIDglI 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 633 FATLFfaETDEQNFEATTQLFFDRV----YKAKGIELESSYRIGD-FDFRGSVTFTDAEISSDAlNPDVVGNTPRRQADM 707
Cdd:PRK14050 555 TASVF--QITKKNVTVTDPLTFASTqlgeVRSRGFELEGKVNLDDnWKALASFTYTDLEITEDA-NPSLIGNSPYLVPET 631
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 518505941 708 IYSLLARYTM-DNAQVGISLVGTT----DSYAQDNNDLKFSGYTQLNAFANYElAENLTLSLNVNNLFD 771
Cdd:PRK14050 632 QASLWLDYAVtDGAFEGVSLGAGVryqgESWADEANTLKVPAATLFDAAIRYE-KNDWGASLNVANLFD 699
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
71-175 |
1.01e-10 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 59.20 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 71 TLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEGNANIAVRGLpvaagGAKFLTLQEDGLPVLQFGDIAFGNADIFVrad 150
Cdd:pfam07715 11 VVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGF-----GSNRVLVLVDGVPLNSGGGGSVDLNSIDP--- 82
|
90 100
....*....|....*....|....*
gi 518505941 151 STMARLDVIRGGSASTAASNSPGGI 175
Cdd:pfam07715 83 EDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
73-771 |
2.99e-10 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 64.01 E-value: 2.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 73 TFEDIDVSSPRSTAEIFRMLPGVrseSTGGEGNAN----IAVRGL-PVAAGGAKFLtlqeDGLPvLQfGDiafgNADIFV 147
Cdd:PRK10044 87 TAEEMALHQPKSVKEALSYTPGV---SVGTRGASNtydhLIIRGFaASGQSQNNYL----DGLK-LQ-GN----FYNDAV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 148 RADSTMARLDVIRGGSASTAASNSPGGIINFISK--TGEHQGgSIAISSGlNYDQFRTDFEFGGDINND--MRFHFGGFV 223
Cdd:PRK10044 154 IDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKrpTTEPLK-EVQFKMG-TDNLFQTGFDFSDALDDDgvYSYRLTGLA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 224 RQGEGVRDpgYQGERGYQI----------KANVT------KEFSAGYVrvyakhlndraaSYMPmpmyADGSSVPGYDAQ 287
Cdd:PRK10044 232 RSANAQQK--GSEEQRYAIapsftwrpddKTNFTflsyfqNEPETGYY------------GWLP----KEGTVEPLPNGK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 288 KdtlqsvYLTQTVRLNGDNQISRgdvrngmNPKVDSFGIEAQFDldENWTLDNRFRISDVSGNFITLFPAEVGNAQG--I 365
Cdd:PRK10044 294 R------LPTDFNEGAKNNTYSR-------NEKMVGYSFDHEFN--DTFTVRQNLRYAENKTSQRSVYGYGVCSDKGhyL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 366 ADSIAGNNSTL-TYAVGPQAGQNYTAADAMriHTFDVEInDFGSMVNDlklarsfgdVDVTFGYymaDQTISMSWLW-NS 443
Cdd:PRK10044 359 NRGYVVDDEKLqNFSVDTQLQSKFATGDVD--HTLLTGV-DFMRMRND---------INAWFGY---ADSVPLLNLYgPV 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 444 YLMALKGNNAELLNV-NAADGTAFSEQGQLAygvpfWGNccqrnydtqysttapyinvgWAFG-----DWSLDASVRRDN 517
Cdd:PRK10044 424 NTDFDFNANSGPYQIlNKQKQTGLYVQDQAE-----WDK--------------------WLVTlggryDWADQSSLNRVN 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 518 GkatgtyagasqsSRDMNNDGAisqieqsvsgidlanpqlvnYSWgynsySAGANYQFNRDWAMFGRISKG----ARANA 593
Cdd:PRK10044 479 G------------TTDKRDDKQ--------------------FTW-----RGGVNYLFDNGITPYFSYSESfepsSGTGK 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 594 DRLLFgkvnaDGSVAredaidevKQYEIGSKSRHGNLNLFATL-FFAETDEQNFEATTQLFFDRV----YKAKGIELESS 668
Cdd:PRK10044 522 DGNIF-----APSKG--------KQYEAGVKYVPKDRPIVVTGaVYQLTKTNNLTADPENSFFSVqggeIRARGVELEAK 588
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 669 YRI-GDFDFRGSVTFTDAEISSDALnpdVVGNTPRRQADMIYSLLARYTM-DNAQVGISL------VGTtdSYAQDNNDL 740
Cdd:PRK10044 589 AALsANVNVTGSYTYTDAEYTTDTT---YKGNTPAQVPKHMASLWADYTFfDGPLSGLTLgtggryTGS--SYGDPANSF 663
|
730 740 750
....*....|....*....|....*....|....*
gi 518505941 741 KFSGYTQLNAFANYELAE-NL---TLSLNVNNLFD 771
Cdd:PRK10044 664 KVGSYTVVDALVKYDLARfGMagsSVALNVNNLFD 698
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
71-327 |
3.84e-10 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 61.43 E-value: 3.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 71 TLTFEDIDVSSPRSTAEIFRMLPGVRSESTGGEG-NANIAVRGLpvaaGGAKFLTLqEDGLPV--LQFGDIAFGNADIfv 147
Cdd:COG4206 21 VIDAEELERSGATSLADALRRVPGVQVSSSGGPGsAASISIRGL----GSNQTLVL-IDGVPLndPSLGGVDLSLIPP-- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 148 radSTMARLDVIRGGSASTAASNSPGGIINFISKTG-EHQGGSIAISSGlNYDQFRTDFEFGGDINN-DMRFHFGGFVRQ 225
Cdd:COG4206 94 ---DDIERIEVLKGAASALYGSDAIGGVINITTKKGkKGFKGSVSASYG-SFGTRRLSASLSGGAGKfSYSLSASYRRSD 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 226 GEGVRDPGYQGERGYQ---IKANVTKEFSAGY-VRVYAKHLNDRAASYMPMPMYADGSSVPGYDAQKDTLQSVYLTQTVR 301
Cdd:COG4206 170 GYRYNDPDLRNNDGYEntsLNARLGYKLGDNGsLSLSGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDGWSLLLLAYYY 249
|
250 260
....*....|....*....|....*.
gi 518505941 302 LNGDNQISRGDVRNGMNPKVDSFGIE 327
Cdd:COG4206 250 YDRDYEDGGGDSAGTSNTDGARAGLS 275
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
11-259 |
2.86e-07 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 54.27 E-value: 2.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 11 LALAVSLAISSTTAIAQQTDNENDVAAEASastglgFERILVTGA--------VSrnqsvmqssvsvsTLTFEDIDVSSP 82
Cdd:PRK13524 8 LALLVNLGIYGVAQAAEAEDAKTDDTPASH------EDTIVVTAAeqnlqapgVS-------------TITAEDIRKRPP 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 83 -RSTAEIFRMLPGVR---SESTGGEGN-ANIAVRGLpvaaGGAKFLTLQeDGLPVLQFGDIAFG-NADIFVRADST---- 152
Cdd:PRK13524 69 aNDVSEIIRTMPGVNltgNSTSGQRGNnRQIDIRGM----GPENTLILI-DGKPVSSRNSVRYGwRGERDTRGDTNwvpp 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 153 --MARLDVIRGGSASTAASNSPGGIINFISK--TGEHQGgsiAISSGLNYDQF-------RTDFEFGGDINNDMRFH-FG 220
Cdd:PRK13524 144 emIERIEVLRGPAAARYGNGAAGGVVNIITKkpTGEWHG---SWNTYFNAPEHkaegatkRTNFSLSGPLGDELSFRlYG 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518505941 221 GF----------------VRQG----------EGVRDPGYQGERGYQIKANVTKEFSAGYVR---VYA 259
Cdd:PRK13524 221 NLnktqadawdinqghqsARTGsyagtlpagrEGVINKDINGLLRWDFAPLQSLELEAGYSRqgnLYA 288
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
645-807 |
1.19e-06 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 52.34 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 645 NFEATTQLFFDRVYKAKGIELESSYRIG-------DFDFRGSVTFTDAEISSDALNPDVVGNTPRRQADMIYSLLARYTM 717
Cdd:TIGR01782 675 GVLVSRPVNGGKAGKIRGVELGYQQTFDflpgplsGFGVQANYTYVDSEADPSVDGVQRRKLPLPGLSKNTANATLYYEK 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 718 DNAQVGIS------LVGTTDSYAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTIGITEAEQGSVPENGiita 791
Cdd:TIGR01782 755 GGFSARLSynyrsdYLLDVGGSNINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTGGKQRPREY---- 830
|
170
....*....|....*.
gi 518505941 792 rTINGRTASVGLRYQF 807
Cdd:TIGR01782 831 -VETGRTYMLGLRYKF 845
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
39-197 |
3.21e-05 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 47.71 E-value: 3.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 39 ASASTGLGFERILVTGAVSRNQSVMQSSVSVSTLTFEDIDVSSPRSTAEIFRMLPGVRSES-TGGEGNANIAVRGLP--- 114
Cdd:PRK13486 16 FSASSIAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESgTGKTGGLEISIRGMPasy 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 115 -------VAAGGAKFLTlqEDGLPVLQFGdiafgnadiFVRADSTMARLDVIRGGSASTAASNSPGGIINFISKTGEHQG 187
Cdd:PRK13486 96 tlilidgVRQGGSSDVT--PNGFSAMNTG---------FMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKW 164
|
170
....*....|
gi 518505941 188 GSiAISSGLN 197
Cdd:PRK13486 165 LS-SVNAGLN 173
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
72-279 |
3.67e-04 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 43.98 E-value: 3.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 72 LTFEDIDVSSP-RSTAEIFRMLPGVR---SESTGGEGNA-NIAVRGLpvaaGGAKFLTLQeDGLPVLQFGDIAFG-NADI 145
Cdd:PRK13528 56 ITAEDIKKRPPvNDLSDIIRKMPGVNltgNSASGTRGNNrQIDIRGM----GPENTLILI-DGVPVTSRNSVRYSwRGER 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 146 FVRADST------MARLDVIRGGSASTAASNSPGGIINFISKT-GEHQGGSIAI-----SSGLNYDQFRTDFEFGGDINN 213
Cdd:PRK13528 131 DTRGDTNwvppemVERIEVIRGPAAARYGSGAAGGVVNIITKRpTNDWHGSLSLytnqpESSKEGATRRANFSLSGPLAG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 214 D---MRFH----------------FGGFVRQG-EGVRDPGYQGERGYQIKANVTKEFSAGYVR---VYAKHLNDRAASYM 270
Cdd:PRK13528 211 DaltMRLYgnlnktdadswdinssAGTKNAAGrEGVRNKDINGVLSWKMTPQQILDFEAGYSRqgnIYAGDTQNSNSSAV 290
|
....*....
gi 518505941 271 PMPMYADGS 279
Cdd:PRK13528 291 TESLAKSGK 299
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
73-184 |
7.51e-04 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 43.06 E-value: 7.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 73 TFEDIDVSSPRSTAEIFRMLPGVRSESTGGEG-NANIAVRGLpvaagGAKFLTLQEDGLPVLQFGdIAfGNADIFVRADS 151
Cdd:PRK10641 50 TRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGqLSSLFIRGT-----NSSHVLVLIDGVRLNQAG-IS-GSADLSQIPIS 122
|
90 100 110
....*....|....*....|....*....|...
gi 518505941 152 TMARLDVIRGGSASTAASNSPGGIINFISKTGE 184
Cdd:PRK10641 123 LVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDK 155
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
649-807 |
1.06e-03 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 42.45 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 649 TTQLFFDRVYkAKGIELESSYRIGD-FDFRGSVTFTDAEISSDALNPDVVGNTPRR--QADMIYSLLARYtmdNAQVGIS 725
Cdd:PRK13483 512 TTYVNIDEAV-TQGVEASLSYPITStLSLSGNYTYTDSEQKSGAYKGSPLNQLPKHlfQASLNWEPTDRL---NSWARVN 587
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 726 LVG-----TTdsyAQDNNDLKFSGYTQLNAFANYELAENLTLSLNVNNLFDTiGITEAEQGSVPEngiitartinGRTAS 800
Cdd:PRK13483 588 YRGeesqpTT---GPSSSSFIAPSYTFLDLGANYQLTDNLKLSAGIYNLFDK-EINYEEYGYVED----------GRRYW 653
|
....*..
gi 518505941 801 VGLRYQF 807
Cdd:PRK13483 654 LGMTYSF 660
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-244 |
1.90e-03 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 41.68 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 1 MKTRNLnRSCLALAVSLAISSTTAiaqQTDNENDVAAEASASTGLGFERILVTGAVSrnqsvmqssvsVSTLTFEDIDVS 80
Cdd:PRK13483 1 MKKYLA-QVISALCLLPAVFVTHA---LAQAAPDKTMETVVVTASGYEQQIRDAPAS-----------ISVITREDLENR 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 81 SPRSTAEIFRMLPGVrsESTGGEGNANIAVRGLpvaagGAKFLTLQEDG---------------------LPVLQfgdia 139
Cdd:PRK13483 66 FYRDLTDALLDVPGV--VVTGGGDRTDISLRGM-----GSQYTLILVDGkrqssretrpnsdgpgveqawTPPLA----- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518505941 140 fgnadifvradsTMARLDVIRGGSASTAASNSPGGIINFIS-KTGEHQGGSIAISSGLNY-----DQFRTDFEFGGDINN 213
Cdd:PRK13483 134 ------------AIERIEVIRGPMSSLYGSDAIGGVINIITrKVPNEWQGEVRLDTTLQEnsdsgNVYQANFFVNGPLIK 201
|
250 260 270
....*....|....*....|....*....|...
gi 518505941 214 DMRFH--FGGFVRQGEGVRDPGYQGERGYQIKA 244
Cdd:PRK13483 202 DLLGLqlYGQYTQREEDDIEGGYRDKDARSLTA 234
|
|
| |
