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Conserved domains on  [gi|518172594|ref|WP_019342802|]
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flagellar assembly peptidoglycan hydrolase FlgJ [Stutzerimonas stutzeri]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgJ super family cl35366
flagellar assembly peptidoglycan hydrolase FlgJ;
12-392 7.93e-134

flagellar assembly peptidoglycan hydrolase FlgJ;


The actual alignment was detected with superfamily member PRK05684:

Pssm-ID: 235559 [Multi-domain]  Cd Length: 312  Bit Score: 385.77  E-value: 7.93e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  12 PDSGSYSDLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLS 91
Cdd:PRK05684   6 SDSGAAYDLQSLNSLKAKAGKDPKANLRAVAQQFEGMFVQMMLKSMRDAN---PKDGLMNSQQTKLYTSMYDQQIAQQLS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  92 KeGGGIGLADVLIRQLSKQQEPSekpnpfaqvaqtegakwssnpnskiapvdptrndsqllnqrrlalpgrLAERAHAQV 171
Cdd:PRK05684  83 A-GGGLGLADMMVKQLSPEQSPA------------------------------------------------PEESAGAVP 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 172 APANAQADQASQTGAIQPLVDLdwkpaiafAAPQdapltingveatAPSAPSKTRFSSPAEFIATMLPMAEKAAKRLGVE 251
Cdd:PRK05684 114 MKFDLETVQSYQNQALAQLVRK--------AIPQ------------PPLASDKPLFGSSDDFVARLSPPAQKAAQQSGVP 173

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 252 PRFLVAQAALETGWGKSIIKQKDGTNSHNLFGIKATG-WNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLL 330
Cdd:PRK05684 174 HHLLLAQAALESGWGQREIRTADGSPSHNLFGIKADGsWKGPVTEITTTEYENGVAVKVKAAFRVYDSYLESFNDYVSLL 253

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518172594 331 ENNDRYKpALQVAsasGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQTIADASTSPA 392
Cdd:PRK05684 254 TNNPRYA-AVTQA---ASPEQFARALQDAGYATDPNYARKLVSVIQQMKSMGEKVSKAYSHD 311
 
Name Accession Description Interval E-value
flgJ PRK05684
flagellar assembly peptidoglycan hydrolase FlgJ;
12-392 7.93e-134

flagellar assembly peptidoglycan hydrolase FlgJ;


Pssm-ID: 235559 [Multi-domain]  Cd Length: 312  Bit Score: 385.77  E-value: 7.93e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  12 PDSGSYSDLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLS 91
Cdd:PRK05684   6 SDSGAAYDLQSLNSLKAKAGKDPKANLRAVAQQFEGMFVQMMLKSMRDAN---PKDGLMNSQQTKLYTSMYDQQIAQQLS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  92 KeGGGIGLADVLIRQLSKQQEPSekpnpfaqvaqtegakwssnpnskiapvdptrndsqllnqrrlalpgrLAERAHAQV 171
Cdd:PRK05684  83 A-GGGLGLADMMVKQLSPEQSPA------------------------------------------------PEESAGAVP 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 172 APANAQADQASQTGAIQPLVDLdwkpaiafAAPQdapltingveatAPSAPSKTRFSSPAEFIATMLPMAEKAAKRLGVE 251
Cdd:PRK05684 114 MKFDLETVQSYQNQALAQLVRK--------AIPQ------------PPLASDKPLFGSSDDFVARLSPPAQKAAQQSGVP 173

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 252 PRFLVAQAALETGWGKSIIKQKDGTNSHNLFGIKATG-WNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLL 330
Cdd:PRK05684 174 HHLLLAQAALESGWGQREIRTADGSPSHNLFGIKADGsWKGPVTEITTTEYENGVAVKVKAAFRVYDSYLESFNDYVSLL 253

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518172594 331 ENNDRYKpALQVAsasGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQTIADASTSPA 392
Cdd:PRK05684 254 TNNPRYA-AVTQA---ASPEQFARALQDAGYATDPNYARKLVSVIQQMKSMGEKVSKAYSHD 311
flagell_FlgJ TIGR02541
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts ...
 19-378 8.95e-87

flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.


Pssm-ID: 274188 [Multi-domain]  Cd Length: 294  Bit Score: 265.18  E-value: 8.95e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   19 DLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATEvmaKDNPFNSQASKQYQDMHDQQLSVTLSkEGGGIG 98
Cdd:TIGR02541   4 DAQSLDSLKAKAVKDPKEQEKEAARQFEALFLNMMLKSMREATP---KDGLFDSQQTRFYTQMLDQQMAQQLS-ANGGIG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   99 LADVLIRQLSKQQ--EPSEkpnpfaqvAQTEGAKWSSNPNSKIAPVDPTRNDSQLLNQRRLALPGRlaerahaqvapana 176
Cdd:TIGR02541  80 LADMIVAQLTKGQgnEPSE--------GAARGAAPSPLVYRPRLDPKPRRIVKALIESVELSRPRG-------------- 137

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  177 qadqasqtgaiqplvdldwkpaiafaapqdapltingveatapSAPSKTRFSSPAEFIATMLPMAEKAAKRLGVEPRFLV 256
Cdd:TIGR02541 138 -------------------------------------------RSHAESVPGHPKSFVNSMLPHARKAAQQLGVPPHLIL 174

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  257 AQAALETGWGKSIIKQKDGTNSHNLFGIKATG-WNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDR 335
Cdd:TIGR02541 175 AQAALESGWGQRQIRNADGSPSYNLFGIKASGsWQGKVVTTMTTEYVDGVAQKLTAKFRSYSSYEEAFSDYARLLNNNPR 254

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 518172594  336 YKPALQvasaSGNSERFVNELQRAGYATDPQYARKINQIARKV 378
Cdd:TIGR02541 255 YEAVLQ----QRSAESFARGLQRAGYATDPRYARKLLQVIQSL 293
FlgJ COG1705
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ...
 146-382 1.16e-67

Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];


Pssm-ID: 441311 [Multi-domain]  Cd Length: 276  Bit Score: 215.60  E-value: 1.16e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 146 RNDSQLLNQRRLALPGRLAERAHAQVAPANAQADQASQTGAIQPLVdldwKPAIAFAAPQDAPLTINGVEATAPSAPSKT 225
Cdd:COG1705   49 SKGASSSQSLEGLASALGGGASALSSAAALALKSAAKSATEAGGGL----ASANAAATSAAALAASLSGAAALAASATAA 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 226 RFSSPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIkqkDGTNSHNLFGIKAT-GWNGASAKVTTTEYVNG 304
Cdd:COG1705  125 ASASPEEFIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSEL---DGSPSNNLFGIKAGgSWQGKSVEVTTTEYVNG 201

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518172594 305 KATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPALQVAsasGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQ 382
Cdd:COG1705  202 KAVKIKARFRAYDSYAESFRDYARLLKNNPRYAGALANA---KDYEAFAKALQKAGYATDPKYADKLISIIESYNLTQ 276
sporang_Gsm NF038016
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ...
 218-382 7.63e-36

sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.


Pssm-ID: 411609 [Multi-domain]  Cd Length: 312  Bit Score: 133.33  E-value: 7.63e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 218 APSAPSKTrfssPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIKQKDgtnsHNLFGIKATGWNGASA--- 294
Cdd:NF038016 152 PPTVPRGT----PAQFIAAVAPPAQQSQRATGVPASVTIAQAILESGWGRSGLTRED----HNYFGIKCFGSPGPIAvgc 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 295 -KVTTTEYV-NGKATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPALQVAsasGNSERFVNELQRAGYATDPQYARKIN 372
Cdd:NF038016 224 rSYATFECSpTGGCFDTTATFRAYASAADSFRDHGRFLSVNSRYAPAFAYT---DDPDQFAREIHKAGYATDPTYADKLI 300

                        170
                 ....*....|
gi 518172594 373 QIARKVQTYQ 382
Cdd:NF038016 301 GLMKQYNLYQ 310
LYZ2 smart00047
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
 229-374 4.09e-31

Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.


Pssm-ID: 214488 [Multi-domain]  Cd Length: 147  Bit Score: 116.00  E-value: 4.09e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   229 SPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIKqkdgTNSHNLFGIKATgWNGASAKVTTTEYVNGKATK 308
Cdd:smart00047   7 STLEFVGKIFNEAQKAYQINGVYPSILIAQAALESGWGTSKLA----KKYNNLFGIKGA-YDGRPVRMGTLEYLNGGWVT 81

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 518172594   309 EVAGFRAYdsFEHSFNDYVRLL-ENNDRYKPALQvasasgnserfVNELQRAGYATDPQYARKINQI 374
Cdd:smart00047  82 VKAAFRGY--FGEKFIDYAYVLrGQNPLYKKRWG-----------SNALQTAGYATDPDYAKKLIRI 135
Glucosaminidase pfam01832
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ...
 239-326 1.79e-23

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.


Pssm-ID: 460354 [Multi-domain]  Cd Length: 91  Bit Score: 93.41  E-value: 1.79e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  239 PMAEKAAKRLGVEPRFLVAQAALETGWGKSiikqKDGTNSHNLFGIKAtGWNGASAkVTTTEYvngkatKEVAGFRAYDS 318
Cdd:pfam01832   2 PAAIEAAKKYGIPASVLLAQAALESGWGTS----RLAKESNNLFGIKA-SWKGKVA-YDTDEV------TVAARFRKYDS 69


                  ....*...
gi 518172594  319 FEHSFNDY 326
Cdd:pfam01832  70 VEESIRDY 77
 
Name Accession Description Interval E-value
flgJ PRK05684
flagellar assembly peptidoglycan hydrolase FlgJ;
12-392 7.93e-134

flagellar assembly peptidoglycan hydrolase FlgJ;


Pssm-ID: 235559 [Multi-domain]  Cd Length: 312  Bit Score: 385.77  E-value: 7.93e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  12 PDSGSYSDLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLS 91
Cdd:PRK05684   6 SDSGAAYDLQSLNSLKAKAGKDPKANLRAVAQQFEGMFVQMMLKSMRDAN---PKDGLMNSQQTKLYTSMYDQQIAQQLS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  92 KeGGGIGLADVLIRQLSKQQEPSekpnpfaqvaqtegakwssnpnskiapvdptrndsqllnqrrlalpgrLAERAHAQV 171
Cdd:PRK05684  83 A-GGGLGLADMMVKQLSPEQSPA------------------------------------------------PEESAGAVP 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 172 APANAQADQASQTGAIQPLVDLdwkpaiafAAPQdapltingveatAPSAPSKTRFSSPAEFIATMLPMAEKAAKRLGVE 251
Cdd:PRK05684 114 MKFDLETVQSYQNQALAQLVRK--------AIPQ------------PPLASDKPLFGSSDDFVARLSPPAQKAAQQSGVP 173

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 252 PRFLVAQAALETGWGKSIIKQKDGTNSHNLFGIKATG-WNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLL 330
Cdd:PRK05684 174 HHLLLAQAALESGWGQREIRTADGSPSHNLFGIKADGsWKGPVTEITTTEYENGVAVKVKAAFRVYDSYLESFNDYVSLL 253

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518172594 331 ENNDRYKpALQVAsasGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQTIADASTSPA 392
Cdd:PRK05684 254 TNNPRYA-AVTQA---ASPEQFARALQDAGYATDPNYARKLVSVIQQMKSMGEKVSKAYSHD 311
flagell_FlgJ TIGR02541
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts ...
 19-378 8.95e-87

flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.


Pssm-ID: 274188 [Multi-domain]  Cd Length: 294  Bit Score: 265.18  E-value: 8.95e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   19 DLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATEvmaKDNPFNSQASKQYQDMHDQQLSVTLSkEGGGIG 98
Cdd:TIGR02541   4 DAQSLDSLKAKAVKDPKEQEKEAARQFEALFLNMMLKSMREATP---KDGLFDSQQTRFYTQMLDQQMAQQLS-ANGGIG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   99 LADVLIRQLSKQQ--EPSEkpnpfaqvAQTEGAKWSSNPNSKIAPVDPTRNDSQLLNQRRLALPGRlaerahaqvapana 176
Cdd:TIGR02541  80 LADMIVAQLTKGQgnEPSE--------GAARGAAPSPLVYRPRLDPKPRRIVKALIESVELSRPRG-------------- 137

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  177 qadqasqtgaiqplvdldwkpaiafaapqdapltingveatapSAPSKTRFSSPAEFIATMLPMAEKAAKRLGVEPRFLV 256
Cdd:TIGR02541 138 -------------------------------------------RSHAESVPGHPKSFVNSMLPHARKAAQQLGVPPHLIL 174

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  257 AQAALETGWGKSIIKQKDGTNSHNLFGIKATG-WNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDR 335
Cdd:TIGR02541 175 AQAALESGWGQRQIRNADGSPSYNLFGIKASGsWQGKVVTTMTTEYVDGVAQKLTAKFRSYSSYEEAFSDYARLLNNNPR 254

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 518172594  336 YKPALQvasaSGNSERFVNELQRAGYATDPQYARKINQIARKV 378
Cdd:TIGR02541 255 YEAVLQ----QRSAESFARGLQRAGYATDPRYARKLLQVIQSL 293
FlgJ COG1705
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ...
 146-382 1.16e-67

Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];


Pssm-ID: 441311 [Multi-domain]  Cd Length: 276  Bit Score: 215.60  E-value: 1.16e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 146 RNDSQLLNQRRLALPGRLAERAHAQVAPANAQADQASQTGAIQPLVdldwKPAIAFAAPQDAPLTINGVEATAPSAPSKT 225
Cdd:COG1705   49 SKGASSSQSLEGLASALGGGASALSSAAALALKSAAKSATEAGGGL----ASANAAATSAAALAASLSGAAALAASATAA 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 226 RFSSPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIkqkDGTNSHNLFGIKAT-GWNGASAKVTTTEYVNG 304
Cdd:COG1705  125 ASASPEEFIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSEL---DGSPSNNLFGIKAGgSWQGKSVEVTTTEYVNG 201

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518172594 305 KATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPALQVAsasGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQ 382
Cdd:COG1705  202 KAVKIKARFRAYDSYAESFRDYARLLKNNPRYAGALANA---KDYEAFAKALQKAGYATDPKYADKLISIIESYNLTQ 276
flgJ PRK12713
flagellar rod assembly protein/muramidase FlgJ; Provisional
 16-391 6.99e-64

flagellar rod assembly protein/muramidase FlgJ; Provisional


Pssm-ID: 139173 [Multi-domain]  Cd Length: 339  Bit Score: 208.06  E-value: 6.99e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  16 SYSDLNRLNQLK--VGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLSKE 93
Cdd:PRK12713  15 SVFDLGRLADLKrdAVKAPDGQRQQTEVARQFEALFLQMMLKRMREAT---PKEGLFDSQQTEMLQGMADEQLALQLASP 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  94 GggIGLADVLIRQLSKQQepsekPNPFAQVAQTEGAKWSSNPNSKIAPVDPTRNdsqllnqrrlaLPGRLAERAHAQVAP 173
Cdd:PRK12713  92 G--IGLAQALLGQMQQGQ-----PPVPAAAAAGGDAAAARALAGTAAPAPLVRD-----------LRGNYVQPDPAPRRE 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 174 ANAQADQASQTGAIQPlvdldwkpaiAFAAPQDAPltingveatapsapsktrfSSPAEFIATMLPMAEKAAKRLGVEPR 253
Cdd:PRK12713 154 VNALLDVLRSNRARDR----------AMAAAEGAP-------------------SHVVDFVSRMSRAANVAAQQSGVPAR 204

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 254 FLVAQAALETGWGKSIIKQKDGTNSHNLFGIKA-TGWNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLEN 332
Cdd:PRK12713 205 LILGQAALESGWGRRELRHEDGSTSYNLFGIKAgASWKGKVVNVMTTEYVDGVAQKLVQPFRAYSSYEESFSDYARLIGN 284

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 518172594 333 NDRYKPALQvasaSGNSERFVNELQRAGYATDPQYARKINQIARKVQTYQTIADASTSP 391
Cdd:PRK12713 285 SPRYEAVTQ----AGNEIEAARRIQEAGYATDPRYAEKLISIMGQLRTSVARADFSGGL 339
flgJ PRK12711
flagellar assembly peptidoglycan hydrolase FlgJ;
38-375 8.26e-63

flagellar assembly peptidoglycan hydrolase FlgJ;


Pssm-ID: 237180 [Multi-domain]  Cd Length: 392  Bit Score: 206.74  E-value: 8.26e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  38 VRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQaSKQYQDMHDQQLSVTLSkEGGGIGLADVLIRQLSKQqepSEKP 117
Cdd:PRK12711  21 IDKVSRQLEGQFAQMLVKSMRDAS---SGDPMFPGE-NQMFREMYDQQMAKALT-DGKGLGLSAMISKQLSGD---TGGP 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 118 NPFAQVAQTEGAK-WSSNPNSKIAPVD-PTRNDSQLLNQRRLALPGRLaERAHAQVAPANAQADQ-ASQTGAIQPLVD-- 192
Cdd:PRK12711  93 ALNTALNTAKAAKaYSLVAGKRDASLPlPARDGAAAGITTSSVAAAAL-SAGNLSGIGMSQVLDLiAGRTGAGEAGSDda 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 193 --LDWKPA---IAFAAPQDAPLTINGVEATAPS-APSKTRFSSPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWG 266
Cdd:PRK12711 172 aaLSWPSAndrWSDVAASDAADANAAVNASAAStAAASLGERTPEGFVAKIWTHAQKAARELGVDPRALVAQAALETGWG 251

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 267 KSIIKqkDGTNSHNLFGIKATGWNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPALQvasAS 346
Cdd:PRK12711 252 RRGIG--NGGDSNNLFGIKATGWNGDKVTTGTHEYVNGVKTTETADFRAYGSAEESFADYVRLLKNNSRYQQALQ---AG 326

                        330       340
                 ....*....|....*....|....*....
gi 518172594 347 GNSERFVNELQRAGYATDPQYARKINQIA 375
Cdd:PRK12711 327 TDIKGFARGLQQAGYATDPGYAAKIAAIA 355
flgJ PRK12709
flagellar rod assembly protein/muramidase FlgJ; Provisional
 19-378 3.09e-62

flagellar rod assembly protein/muramidase FlgJ; Provisional


Pssm-ID: 237179 [Multi-domain]  Cd Length: 320  Bit Score: 202.85  E-value: 3.09e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  19 DLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLSKEGggIG 98
Cdd:PRK12709  17 DVQGFDALRAQAKASPQAGAKMVAGQFDAMFTQMMLKSMRDAT---PSDGLFDSHTSKMYTSMLDQQLAQQMSSKG--IG 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  99 LADVLIRQLSKQQEPSEKPNPFAQVAQTEGAKWssnpnskiapvdptrndsqllNQRRLALPGRLAErahaqvAPANAQA 178
Cdd:PRK12709  92 VADALMKQLLRNAGVAAGAQGDAGAGGMGGLGG---------------------NEGGLAAMNALAK------AYANAAN 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 179 DQASQTGAiqplvdldwkpaiAFAApqdapltingveATAPSAPSKTRFSSPAE--FIATMLPMAEKAAKRLGVEPRFLV 256
Cdd:PRK12709 145 NGALAGTR-------------GYSA------------GSALTPPLKGNGGSPDAdaFVDKLAAPAQAASAATGIPARFIV 199

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 257 AQAALETGWGKSIIKQKDGTNSHNLFGIKAT-GWNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDR 335
Cdd:PRK12709 200 GQAALESGWGKREIRGADGSTSYNVFGIKATkGWTGRTVSAVTTEYVNGKPRRVVAKFRAYDSYEHAMTDYANLLKNNPR 279

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 518172594 336 YKpalQVASASGNSERFVNELQRAGYATDPQYARKINQIARKV 378
Cdd:PRK12709 280 YA---GVLNASRSVEGFAHGMQKAGYATDPHYAKKLISIMQQI 319
flgJ PRK12712
flagellar rod assembly protein/muramidase FlgJ; Provisional
 24-380 2.21e-57

flagellar rod assembly protein/muramidase FlgJ; Provisional


Pssm-ID: 139172 [Multi-domain]  Cd Length: 344  Bit Score: 190.99  E-value: 2.21e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  24 NQLKVGKDrdgAENVRKVAQEFESLFMNEMLKSMRSATevmAKDNPFNSQASKQYQDMHDQQLSVTLSKEGggIGLADVL 103
Cdd:PRK12712  28 HSARGGAD---AGTLQAAARQFEAVFTQMVLKSMRDAT---PQDGLFDNEQSKLYMSMMDQQLAQQMSSRG--IGLADVM 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 104 IRQLSKQQEPSEKPNpfaqVAQTEGAKWSSNPNSKIApvdptrndsqllnqrRLaLPGRLAerahaqvAPANAQADQASQ 183
Cdd:PRK12712 100 VRQLARATGTQMPPG----MNAAGGATAGSAADAEMA---------------RL-LDGRGA-------GAADADAGDLPA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 184 TGAIQPlvDLDWKPAIAFAA--PQDAPLTINGVEATAP---SAPSKTrfsspAEFIATMLPMAEKAAKRLGVEPRFLVAQ 258
Cdd:PRK12712 153 IGTIVP--GQAWNPTAGLRQyqPQAYADQGQGEDRLGRlpdDAPAHV-----SAFVARMAGPAEAASRASGVPARLIVGQ 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 259 AALETGWGKSIIKQKDGTNSHNLFGIKA-TGWNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDRYK 337
Cdd:PRK12712 226 AALESGWGRREITHADGSTTFNVFGIKAgANWKGRVAEVTTTEYVDGQPQKVRARFRAYGSYDEACADYARLLTSNPRYA 305

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 518172594 338 PALQVASAsgnsERFVNELQRAGYATDPQYARKINQIARKVQT 380
Cdd:PRK12712 306 GVVSAASA----DEAAHGLQRAGYATDPAYGHKLVKIMKKVSA 344
flgJ PRK12710
flagellar rod assembly protein/muramidase FlgJ; Provisional
 11-390 6.92e-43

flagellar rod assembly protein/muramidase FlgJ; Provisional


Pssm-ID: 139170 [Multi-domain]  Cd Length: 291  Bit Score: 151.48  E-value: 6.92e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  11 TPDSGSYSDLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATEVMAKDNPFNSQASKQYQDMHDQQLSVTL 90
Cdd:PRK12710   2 TIQSIATSDFQGLNELKVQAKNNAKEALPEVAKQFEGIFLQSMLKSMRMGQHFLDESSPFSGKNEATFQEMLDTQYASTI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  91 SkEGGGIGLADVLIRQLSkqqepsekpnpfaqvaqtegakwssnpnskiapvdptrndsqllnqrrlalpgrlaerahaq 170
Cdd:PRK12710  82 A-ESKGIGLAALLAKQLE-------------------------------------------------------------- 98

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 171 vapaNAQADQASqtgaiqplvdldwkpaiafaAPQDAPLTINGVEATApsapSKTRFSSPAEFIATMLPMAEKAAKRLGV 250
Cdd:PRK12710  99 ----NSVGDKAN--------------------NPVNSSTEVSNTKVTN----SEESLSVVDDFVKSVWPTAKQAASLIGL 150

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 251 EPRFLVAQAALETGWGKSIIKQKDGTNSHNLFGIKaTGWNG--ASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVR 328
Cdd:PRK12710 151 DPKLLVAQAALETGWGKFVTRDADGSSSNNLFNIK-TGSHSevESIQVKTTEYIADTPIKINASFRKYPSIEHSFHDYVS 229

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518172594 329 LLENNDRYKPALQVASasgNSERFVNELQRAGYATDPQYARKINQIARKVQTYQTIADASTS 390
Cdd:PRK12710 230 LIKGSERYQMALANAE---NPEIYVSELNKAGYATDPNYSNKILSIYHGDELNQAIQRCESS 288
FlgJ1 COG3951
Rod binding protein domain [Cell motility];
11-116 9.64e-38

Rod binding protein domain [Cell motility];


Pssm-ID: 443151 [Multi-domain]  Cd Length: 107  Bit Score: 131.97  E-value: 9.64e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  11 TPDSGSYSDLNRLNQLKVGKDRDGAENVRKVAQEFESLFMNEMLKSMRSATEvmaKDNPFNSQASKQYQDMHDQQLSVTL 90
Cdd:COG3951    6 SLSSSLALDAQSLNALKAAAKADDDAALKEAAQQFEALFLQMMLKSMRKAVP---EDGLFGSQAEDMFRDMLDQQLAKEL 82

                         90       100
                 ....*....|....*....|....*.
gi 518172594  91 SKeGGGIGLADVLIRQLSKQQEPSEK 116
Cdd:COG3951   83 AK-GGGLGLADMIYRQLSRQQEAAAA 107
sporang_Gsm NF038016
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ...
 218-382 7.63e-36

sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.


Pssm-ID: 411609 [Multi-domain]  Cd Length: 312  Bit Score: 133.33  E-value: 7.63e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 218 APSAPSKTrfssPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIKQKDgtnsHNLFGIKATGWNGASA--- 294
Cdd:NF038016 152 PPTVPRGT----PAQFIAAVAPPAQQSQRATGVPASVTIAQAILESGWGRSGLTRED----HNYFGIKCFGSPGPIAvgc 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 295 -KVTTTEYV-NGKATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPALQVAsasGNSERFVNELQRAGYATDPQYARKIN 372
Cdd:NF038016 224 rSYATFECSpTGGCFDTTATFRAYASAADSFRDHGRFLSVNSRYAPAFAYT---DDPDQFAREIHKAGYATDPTYADKLI 300

                        170
                 ....*....|
gi 518172594 373 QIARKVQTYQ 382
Cdd:NF038016 301 GLMKQYNLYQ 310
LYZ2 smart00047
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
 229-374 4.09e-31

Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.


Pssm-ID: 214488 [Multi-domain]  Cd Length: 147  Bit Score: 116.00  E-value: 4.09e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   229 SPAEFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWGKSIIKqkdgTNSHNLFGIKATgWNGASAKVTTTEYVNGKATK 308
Cdd:smart00047   7 STLEFVGKIFNEAQKAYQINGVYPSILIAQAALESGWGTSKLA----KKYNNLFGIKGA-YDGRPVRMGTLEYLNGGWVT 81

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 518172594   309 EVAGFRAYdsFEHSFNDYVRLL-ENNDRYKPALQvasasgnserfVNELQRAGYATDPQYARKINQI 374
Cdd:smart00047  82 VKAAFRGY--FGEKFIDYAYVLrGQNPLYKKRWG-----------SNALQTAGYATDPDYAKKLIRI 135
Glucosaminidase pfam01832
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ...
 239-326 1.79e-23

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.


Pssm-ID: 460354 [Multi-domain]  Cd Length: 91  Bit Score: 93.41  E-value: 1.79e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  239 PMAEKAAKRLGVEPRFLVAQAALETGWGKSiikqKDGTNSHNLFGIKAtGWNGASAkVTTTEYvngkatKEVAGFRAYDS 318
Cdd:pfam01832   2 PAAIEAAKKYGIPASVLLAQAALESGWGTS----RLAKESNNLFGIKA-SWKGKVA-YDTDEV------TVAARFRKYDS 69


                  ....*...
gi 518172594  319 FEHSFNDY 326
Cdd:pfam01832  70 VEESIRDY 77
flgJ PRK12708
peptidoglycan hydrolase; Reviewed
 9-130 1.36e-21

peptidoglycan hydrolase; Reviewed


Pssm-ID: 139168 [Multi-domain]  Cd Length: 134  Bit Score: 89.51  E-value: 1.36e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594   9 RRTPDSGSYSDLNRLNQLKVGKDRDGAenVRKVAQEFESLFMNEMLKSMRSATEVMA-KDNPFNSQASKQYQDMHDQQLS 87
Cdd:PRK12708   1 MAINNSSPYLPGLNAGDLIPQNLEQGA--LKLAAQQFEAQFLQTVLKQMRSASDVMAdEDDPFNSKNQGMYRDFYDAELA 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 518172594  88 VTLSKEgGGIGLADVLIRQLSKQQEPSEKPNPFAQVAQTEGAK 130
Cdd:PRK12708  79 SRLSSQ-RSMGLAEVMIKQLSSKLKSAPEVVALESQTLTTTAM 120
PRK08581 PRK08581
amidase domain-containing protein;
108-374 1.24e-14

amidase domain-containing protein;


Pssm-ID: 236304 [Multi-domain]  Cd Length: 619  Bit Score: 75.59  E-value: 1.24e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 108 SKQQEPS--EKPNPFAQVAQTEGAKWSSNPNSKIAP------VDPTRNDSQLLNQRRLALPGRLAERAHAQVAPANAQAD 179
Cdd:PRK08581 191 PNSPKPTqpNQSNSQPASDDTANQKSSSKDNQSMSDsaldsiLDQYSEDAKKTQKDYASQSKKDKTETSNTKNPQLPTQD 270

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 180 QASQTGAIQPLVDLDWK--PAIAFAAPQDAPlTINGVEATAPSapSKTRFSSPAEFIATMLPMAEKAAKRLGVEPRFLVA 257
Cdd:PRK08581 271 ELKHKSKPAQSFENDVNqsNTRSTSLFETGP-SLSNNDDSGSF--NVVDSKDTRQFIKSIAKDAHRIGQDNDIYASVMIA 347

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 258 QAALETGWGKSIIKQKDgtnSHNLFGIKATgWNGASAKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLE-----N 332
Cdd:PRK08581 348 QAILESDSGQSALAKSP---NHNLFGIKGA-YEGNSVSFNTLEADGNQLYSINAGFRKYPSTKESLEDYADLIKngidgN 423

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 518172594 333 NDRYKPALQvaSASGNSERFVNELQRAgYATDPQYARKINQI 374
Cdd:PRK08581 424 STIYKPTWK--SEAKSYKDATSHLSKT-YATDPNYAKKLNSI 462
Rod-binding pfam10135
Rod binding protein; Members of this family are involved in the assembly of the prokaryotic ...
 55-106 2.06e-13

Rod binding protein; Members of this family are involved in the assembly of the prokaryotic flagellar rod.


Pssm-ID: 431078 [Multi-domain]  Cd Length: 50  Bit Score: 64.15  E-value: 2.06e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 518172594   55 KSMRSATEvmAKDNPFN-SQASKQYQDMHDQQLSVTLSKeGGGIGLADVLIRQ 106
Cdd:pfam10135   1 KSMRKTVP--KEDGLFDgSEAEDMFRDMLDQQLAKQLAK-GGGLGLADMLYRQ 50
PRK06347 PRK06347
1,4-beta-N-acetylmuramoylhydrolase;
197-374 7.32e-10

1,4-beta-N-acetylmuramoylhydrolase;


Pssm-ID: 180536 [Multi-domain]  Cd Length: 592  Bit Score: 60.48  E-value: 7.32e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 197 PAIAFAAPQDAPLTI-NGVEATAPSAPS------KTRFSSPA---EFIATMLPMAEKAAKRLGVEPRFLVAQAALETGWG 266
Cdd:PRK06347 107 AAKQVEKAPAEPATVsNPDNATSSSTPAtynllqKSALRSGAtvqSFIQTIQASSSQIAAENDLYASVMIAQAILESAYG 186

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 267 KSiikQKDGTNSHNLFGIKAtGWNGAS-AKVTTTEYVNGKATKEVAGFRAYDSFEHSFNDYVRLLENNDRYKPAL--QVA 343
Cdd:PRK06347 187 TS---ELGSAPNYNLFGIKG-AYNGQSyTKQTLEDDGKGNYYTITAKFRKYPSYHQSLEDYAQVIRKGPSWNPNYysKVW 262

                        170       180       190
                 ....*....|....*....|....*....|.
gi 518172594 344 SASGNSERFVNELQRAGYATDPQYARKINQI 374
Cdd:PRK06347 263 KSNTTSYKDATKALTGTYATDTAYATKLNDL 293
LytD COG4193
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism];
243-374 2.75e-08

Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism];


Pssm-ID: 443347 [Multi-domain]  Cd Length: 423  Bit Score: 55.36  E-value: 2.75e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 243 KAAKRLGVEPRFLVAQAALETGWGKSII---KQKDGTNSHNLFGIKATgwngasakvTTTEYVNGKATkevAGFRAYDSF 319
Cdd:COG4193  280 EAAKKYGVNPLYLASHALLETGNGTSKLakgVEVNGKTYYNLFGIGAY---------DSNPLENGAKY---AYKQGWTSP 347

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518172594 320 EHSF--------NDYVrlleNNDRYKpalqvasasGN---SERF--VNELQRAGYATDPQYARKINQI 374
Cdd:COG4193  348 EKAIvggakfigSNYI----NNTGYG---------QNtlyKMRWnpVNPGTNHQYATDPFWAEKIAGH 402
PRK10927 PRK10927
cell division protein FtsN;
94-225 1.72e-04

cell division protein FtsN;


Pssm-ID: 236797 [Multi-domain]  Cd Length: 319  Bit Score: 43.13  E-value: 1.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594  94 GGGIGLADVLI---RQLSKQQEPSEKPNPfaqvAQTEGAKWSSN-PNSKIAPVDPTRNDSQLLNQRRLALPGRLAERAH- 168
Cdd:PRK10927 105 GGEVKTPEQLTpeqRQLLEQMQADMRQQP----TQLVEVPWNEQtPEQRQQTLQRQRQAQQLAEQQRLAQQSRTTEQSWq 180

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 518172594 169 -----AQVAPANAQADQASQTGAIQPLVDLDWKPAIAFA---APQDAPLTingveaTAPSAPSKT 225
Cdd:PRK10927 181 qqtrtSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTTAqskPQQAAPVT------RAADAPKPT 239
PRK12790 PRK12790
flagellar rod assembly protein FlgJ;
39-111 2.31e-04

flagellar rod assembly protein FlgJ;


Pssm-ID: 237203 [Multi-domain]  Cd Length: 115  Bit Score: 40.57  E-value: 2.31e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 518172594  39 RKVAQEFESLFMNEMLKSMRSAtevMAKDNPF-NSQASKQYQDMHDQQLSVTLSKeGGGIGLADVLIRQLSKQQ 111
Cdd:PRK12790  41 KATATDFEAMFLNSMFSQMTSG---LKGEGPFgDTVGTGVWRSMLTEQYSKSFAK-AGGVGISDDVFRTLILQQ 110
PRK10356 PRK10356
protein bax;
247-336 1.22e-03

protein bax;


Pssm-ID: 182404  Cd Length: 274  Bit Score: 40.24  E-value: 1.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172594 247 RLGVEPRFLVA-QAALETGWGKSIIKQkdgtNSHNLFGIKATGWNGASAKvttteyvnGKatkeVAGFRAYDSFEHSFND 325
Cdd:PRK10356 145 RVDIIPTSMVAtMAAAESGWGTSKLAR----NNNNLFGMKCMKGRCTNAP--------GK----VKGYSQFSSVKESVSA 208

                         90
                 ....*....|.
gi 518172594 326 YVRLLENNDRY 336
Cdd:PRK10356 209 YVTNLNTHPAY 219
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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