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MULTISPECIES: preprotein translocase subunit SecY [Bacillus]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-430
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 585.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 1 M FK T IS N FMRVSDI R NK I I FTL LM LIV F R I G AF IPVP YVNAE AL QA --- Q SQM G VFD LLN T F G GGAL YQ FSIFA M GI T PY 77
Cdd:COG0201 1 M LS T LK N AFKIPEL R KR I L FTL GI LIV Y R L G SH IPVP GIDPA AL AQ lfa Q QSG G LLG LLN M F S GGAL SR FSIFA L GI M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 78 ITASII I QLL QM d V V PK FT E WS K Q GE V GR R K LA Q F TRY F T I VL GFI QA L G MSY G FNNL - AN G M L IEKS GI ST YL IIALV L 156
Cdd:COG0201 81 ITASII M QLL TV - V I PK LE E LQ K E GE E GR K K IT Q Y TRY L T V VL ALL QA F G IAL G LRSG p PG G G L VIDP GI LF YL LTVIT L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 157 T G GT A FLMWLGEQIT SH G V GNGIS I IIFAGIVA SI P KTIG QI Y E TQFV G sndql FIH I VKVA LL VIAI LAVI VG V I F IQ Q 236
Cdd:COG0201 160 T A GT M FLMWLGEQIT ER G I GNGIS L IIFAGIVA RL P SALA QI F E LVRT G ----- ELS I LLLL LL LVLA LAVI AF V V F VE Q 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 237 A V R K I AI QYAK GTGRSPAG GGQST H LPLKVN P AGVIP V IFA VAF L IT P R TIA S FFG TN - DVTK WI Q NY FDNTH P VGMAI Y 315
Cdd:COG0201 235 A Q R R I PV QYAK RVVGRRMY GGQST Y LPLKVN M AGVIP I IFA SSL L LF P A TIA Q FFG GS s GWLQ WI A NY LSPGS P LYIVL Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 316 VA LII A FTYFY AFVQV NPE QM ADNLKK Q GG Y IPG V RPGK M T QDRITSI L Y RLT F VG S IFLA V I S ILP IFFIQFA G L P Q sa 395
Cdd:COG0201 315 AL LII F FTYFY TAITF NPE EI ADNLKK S GG F IPG I RPGK P T AEYLDKV L T RLT L VG A IFLA L I A ILP EILGAIT G V P F -- 392
410 420 430
....*....|....*....|....*....|....*
gi 518087074 396 QI GGTSLLIVVGVAL E TMKQ L ESQL VK R N Y R GF M K 430
Cdd:COG0201 393 YF GGTSLLIVVGVAL D TMKQ I ESQL LM R H Y E GF L K 427
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-430
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 585.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 1 M FK T IS N FMRVSDI R NK I I FTL LM LIV F R I G AF IPVP YVNAE AL QA --- Q SQM G VFD LLN T F G GGAL YQ FSIFA M GI T PY 77
Cdd:COG0201 1 M LS T LK N AFKIPEL R KR I L FTL GI LIV Y R L G SH IPVP GIDPA AL AQ lfa Q QSG G LLG LLN M F S GGAL SR FSIFA L GI M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 78 ITASII I QLL QM d V V PK FT E WS K Q GE V GR R K LA Q F TRY F T I VL GFI QA L G MSY G FNNL - AN G M L IEKS GI ST YL IIALV L 156
Cdd:COG0201 81 ITASII M QLL TV - V I PK LE E LQ K E GE E GR K K IT Q Y TRY L T V VL ALL QA F G IAL G LRSG p PG G G L VIDP GI LF YL LTVIT L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 157 T G GT A FLMWLGEQIT SH G V GNGIS I IIFAGIVA SI P KTIG QI Y E TQFV G sndql FIH I VKVA LL VIAI LAVI VG V I F IQ Q 236
Cdd:COG0201 160 T A GT M FLMWLGEQIT ER G I GNGIS L IIFAGIVA RL P SALA QI F E LVRT G ----- ELS I LLLL LL LVLA LAVI AF V V F VE Q 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 237 A V R K I AI QYAK GTGRSPAG GGQST H LPLKVN P AGVIP V IFA VAF L IT P R TIA S FFG TN - DVTK WI Q NY FDNTH P VGMAI Y 315
Cdd:COG0201 235 A Q R R I PV QYAK RVVGRRMY GGQST Y LPLKVN M AGVIP I IFA SSL L LF P A TIA Q FFG GS s GWLQ WI A NY LSPGS P LYIVL Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 316 VA LII A FTYFY AFVQV NPE QM ADNLKK Q GG Y IPG V RPGK M T QDRITSI L Y RLT F VG S IFLA V I S ILP IFFIQFA G L P Q sa 395
Cdd:COG0201 315 AL LII F FTYFY TAITF NPE EI ADNLKK S GG F IPG I RPGK P T AEYLDKV L T RLT L VG A IFLA L I A ILP EILGAIT G V P F -- 392
410 420 430
....*....|....*....|....*....|....*
gi 518087074 396 QI GGTSLLIVVGVAL E TMKQ L ESQL VK R N Y R GF M K 430
Cdd:COG0201 393 YF GGTSLLIVVGVAL D TMKQ I ESQL LM R H Y E GF L K 427
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
15-425
2.35e-164
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 468.31
E-value: 2.35e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 15 R N K II FTL LM L IV FRIG A FIP V P YVN A E A L Q AQ - S Q MGV F D LLNTF G GGAL Y Q F SIFA M GI T PYITASIIIQLL QM DV V P 93
Cdd:TIGR00967 1 R E K LL FTL GL L VL FRIG T FIP I P GID A S A F Q NL i Q Q NPI F G LLNTF S GGAL G Q I SIFA L GI S PYITASIIIQLL TG DV P P 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 94 KFTEWS K Q GE V GRRK LA Q F TRY F T IV L G FIQ A LG MSY gfnn LANGMLIEKS G IST YL I I ALV LT G G TAFL MWLGEQIT SH 173
Cdd:TIGR00967 81 LLQLQK K E GE I GRRK IN Q L TRY L T LI L A FIQ S LG IVM ---- TGMYGYVGDP G AFF YL L I VIQ LT T G SMIV MWLGEQIT KY 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 174 G V GNGIS II IFAGI V A S IP KTIG Q IY E -- TQF V GSNDQLFIHI v KVA L LV IA ILA V IVG V I F I QQA V RKI A IQ Y AK GT G R 251
Cdd:TIGR00967 157 G I GNGIS LL IFAGI A A T IP SGLL Q PT E vr QSK V RDLISFLQNL - PFL L YL IA TII V FAV V V F V QQA R RKI P IQ S AK RQ G G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 252 SP ag G G QST H LPLK V N P AGVIPVIFA V A F L IT P R TI AS F FGT N DVTK W IQ N --- YFDNTH P V G MAI Y VA LII A F TY FY AF 328
Cdd:TIGR00967 236 RR -- G S QST Y LPLK L N Y AGVIPVIFA S A L L SN P A TI SQ F LNS N QGGA W FL N pil SLSLSD P I G AIL Y LI LII F F SF FY VE 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 329 V Q V NPE Q MA D NLKKQG GY IPG V RPGKMT QDRITSILY RLTFVGS I FL AV I SI LP I F FIQFA GLP Q S AQI GGTSLLIVVGV 408
Cdd:TIGR00967 314 L Q L NPE D MA K NLKKQG MF IPG I RPGKMT EKYLKRVIP RLTFVGS L FL GL I AL LP N F LGAIG GLP T S KGL GGTSLLIVVGV 393
410
....*....|....*..
gi 518087074 409 A LE T M KQLES Q L VK RNY 425
Cdd:TIGR00967 394 A ID T Y KQLES E L IS RNY 410
SecY
pfam00344 SecY;
68-413
7.09e-131
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 379.86
E-value: 7.09e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 68 S I FA M GI T PYITASII I QLL Q md VV PKFT E WS K Q GE V GR R K LA Q F TRY F T I VL GF IQA L G MSYGF nnlangm LIEKS G IS 147
Cdd:pfam00344 1 S L FA L GI M PYITASII M QLL G -- VV ISLE E LK K E GE E GR K K IN Q Y TRY L T V VL AL IQA I G IVLSL ------- GVYGG G GG 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 148 T YL I I A L V LT G GT A FLMWLGEQIT SH G V GNGIS I IIFAGIVA SI P KTIGQIYETQ F VG sndq LFIH I VKVA LL V I AI LAV 227
Cdd:pfam00344 72 F YL L I V L Q LT A GT M FLMWLGEQIT KY G I GNGIS L IIFAGIVA RL P SAFSGALIAL F RL ---- GARS I LPNL LL L I IT LAV 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 228 I VG V IFI QQA V R K I AI QYAK GTG rspag GGQS TH LPLK V N P AGVIP V IFA VAF L IT P R TIA S FFG TN dvtk W I QNYF D NT 307
Cdd:pfam00344 148 I AL V VYL QQA E R R I PV QYAK RVV ----- GGQS SY LPLK L N Y AGVIP I IFA SSL L SF P A TIA Q FFG LQ ---- F I AAAL D PG 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 308 H P VGMAI Y VA LII A F T YFY AFVQV NP EQM A D NLKKQGG Y IPG V RPGK M T QDRITSILY R L T FV G SI FL AV I SI LP IFFIQ 387
Cdd:pfam00344 219 S P LYTVL Y AL LII F F A YFY TAITF NP KDI A E NLKKQGG F IPG I RPGK P T AKYLDRVIP R I T LL G AL FL GI I AV LP DLLGA 298
330 340
....*....|....*....|....*.
gi 518087074 388 FA G L P QS aq I GGTSLLIVVGVAL E T M 413
Cdd:pfam00344 299 LT G V P FG -- F GGTSLLIVVGVAL D T Y 322
secY
CHL00161 preprotein translocase subunit SecY; Validated
12-430
7.34e-90
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 278.42
E-value: 7.34e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 12 SDIR N KII FTL LM L IVF R I G A FIPVP YVNAEA L - QAQ S QMGVFD LLNTF G GG ALYQFSI FA M GI T PYI T ASIIIQLL q MD 90
Cdd:CHL00161 8 DELL N RLL FTL GL L LLI R L G T FIPVP GIDHTQ L y PSL S NNPLLN LLNTF S GG GFFVIGL FA L GI L PYI N ASIIIQLL - TS 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 91 VV P KFTEWS K - Q GE V GRRK LA Q F TRY F T IVLGF IQ AL G M S YGFNNLANGM lieks GISTY L I I A L V LT G G TAFLM WL G E Q 169
Cdd:CHL00161 87 II P SLEKLQ K e E GE A GRRK IN Q Y TRY L T LGWAI IQ SI G I S FWLKPYLFNW ----- NLLLA L E I V L A LT S G SMIVL WL S E L 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 170 IT SH G V GNG I S II IF AG IV ASI PK TIGQ iyetq FVG S NDQ l F I H I VKVA LL VIAILAVIV G V IF I Q Q A V RKI AIQY AK GT 249
Cdd:CHL00161 162 IT EK G L GNG S S LL IF FN IV SNL PK LLQS ----- LLF S LSA - N I T I LSIL LL LFLFFITLI G I IF L Q E A I RKI PLIS AK QL 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 250 G R S PAGGGQ S t H LPL KV N P AGV I P V IFA V A F L IT P RTIA s FFGT N DVTKWIQNY F DNTHPVG --- MAI Y VA LI IA F T YFY 326
Cdd:CHL00161 236 G K S SRLASN S - Y LPL RL N Q AGV M P I IFA S A L L VL P GYLT - NILL N QFLLPLLSL F LQLASFK ily LVL Y FV LI LF F S YFY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 327 AFVQV NP EQMAD NL K K QGGY IPG V RPGK M T QDRITSI L Y RLT FV G SI FLA V I SI LP IFFIQFAG L PQSAQI G G TSLLI V V 406
Cdd:CHL00161 314 STIVL NP KDISE NL Q K MAVS IPG I RPGK A T TKYLKKT L N RLT LL G AL FLA F I AL LP NLIESVLN L SVFKGL G T TSLLI L V 393
410 420
....*....|....*....|....
gi 518087074 407 GVA LE T MK Q LESQ L VKR NY RGFMK 430
Cdd:CHL00161 394 GVA ID T SR Q IQTY L ISN NY ENMYD 417
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
1-430
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 585.12
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 1 M FK T IS N FMRVSDI R NK I I FTL LM LIV F R I G AF IPVP YVNAE AL QA --- Q SQM G VFD LLN T F G GGAL YQ FSIFA M GI T PY 77
Cdd:COG0201 1 M LS T LK N AFKIPEL R KR I L FTL GI LIV Y R L G SH IPVP GIDPA AL AQ lfa Q QSG G LLG LLN M F S GGAL SR FSIFA L GI M PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 78 ITASII I QLL QM d V V PK FT E WS K Q GE V GR R K LA Q F TRY F T I VL GFI QA L G MSY G FNNL - AN G M L IEKS GI ST YL IIALV L 156
Cdd:COG0201 81 ITASII M QLL TV - V I PK LE E LQ K E GE E GR K K IT Q Y TRY L T V VL ALL QA F G IAL G LRSG p PG G G L VIDP GI LF YL LTVIT L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 157 T G GT A FLMWLGEQIT SH G V GNGIS I IIFAGIVA SI P KTIG QI Y E TQFV G sndql FIH I VKVA LL VIAI LAVI VG V I F IQ Q 236
Cdd:COG0201 160 T A GT M FLMWLGEQIT ER G I GNGIS L IIFAGIVA RL P SALA QI F E LVRT G ----- ELS I LLLL LL LVLA LAVI AF V V F VE Q 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 237 A V R K I AI QYAK GTGRSPAG GGQST H LPLKVN P AGVIP V IFA VAF L IT P R TIA S FFG TN - DVTK WI Q NY FDNTH P VGMAI Y 315
Cdd:COG0201 235 A Q R R I PV QYAK RVVGRRMY GGQST Y LPLKVN M AGVIP I IFA SSL L LF P A TIA Q FFG GS s GWLQ WI A NY LSPGS P LYIVL Y 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 316 VA LII A FTYFY AFVQV NPE QM ADNLKK Q GG Y IPG V RPGK M T QDRITSI L Y RLT F VG S IFLA V I S ILP IFFIQFA G L P Q sa 395
Cdd:COG0201 315 AL LII F FTYFY TAITF NPE EI ADNLKK S GG F IPG I RPGK P T AEYLDKV L T RLT L VG A IFLA L I A ILP EILGAIT G V P F -- 392
410 420 430
....*....|....*....|....*....|....*
gi 518087074 396 QI GGTSLLIVVGVAL E TMKQ L ESQL VK R N Y R GF M K 430
Cdd:COG0201 393 YF GGTSLLIVVGVAL D TMKQ I ESQL LM R H Y E GF L K 427
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
15-425
2.35e-164
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 468.31
E-value: 2.35e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 15 R N K II FTL LM L IV FRIG A FIP V P YVN A E A L Q AQ - S Q MGV F D LLNTF G GGAL Y Q F SIFA M GI T PYITASIIIQLL QM DV V P 93
Cdd:TIGR00967 1 R E K LL FTL GL L VL FRIG T FIP I P GID A S A F Q NL i Q Q NPI F G LLNTF S GGAL G Q I SIFA L GI S PYITASIIIQLL TG DV P P 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 94 KFTEWS K Q GE V GRRK LA Q F TRY F T IV L G FIQ A LG MSY gfnn LANGMLIEKS G IST YL I I ALV LT G G TAFL MWLGEQIT SH 173
Cdd:TIGR00967 81 LLQLQK K E GE I GRRK IN Q L TRY L T LI L A FIQ S LG IVM ---- TGMYGYVGDP G AFF YL L I VIQ LT T G SMIV MWLGEQIT KY 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 174 G V GNGIS II IFAGI V A S IP KTIG Q IY E -- TQF V GSNDQLFIHI v KVA L LV IA ILA V IVG V I F I QQA V RKI A IQ Y AK GT G R 251
Cdd:TIGR00967 157 G I GNGIS LL IFAGI A A T IP SGLL Q PT E vr QSK V RDLISFLQNL - PFL L YL IA TII V FAV V V F V QQA R RKI P IQ S AK RQ G G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 252 SP ag G G QST H LPLK V N P AGVIPVIFA V A F L IT P R TI AS F FGT N DVTK W IQ N --- YFDNTH P V G MAI Y VA LII A F TY FY AF 328
Cdd:TIGR00967 236 RR -- G S QST Y LPLK L N Y AGVIPVIFA S A L L SN P A TI SQ F LNS N QGGA W FL N pil SLSLSD P I G AIL Y LI LII F F SF FY VE 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 329 V Q V NPE Q MA D NLKKQG GY IPG V RPGKMT QDRITSILY RLTFVGS I FL AV I SI LP I F FIQFA GLP Q S AQI GGTSLLIVVGV 408
Cdd:TIGR00967 314 L Q L NPE D MA K NLKKQG MF IPG I RPGKMT EKYLKRVIP RLTFVGS L FL GL I AL LP N F LGAIG GLP T S KGL GGTSLLIVVGV 393
410
....*....|....*..
gi 518087074 409 A LE T M KQLES Q L VK RNY 425
Cdd:TIGR00967 394 A ID T Y KQLES E L IS RNY 410
SecY
pfam00344 SecY;
68-413
7.09e-131
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 379.86
E-value: 7.09e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 68 S I FA M GI T PYITASII I QLL Q md VV PKFT E WS K Q GE V GR R K LA Q F TRY F T I VL GF IQA L G MSYGF nnlangm LIEKS G IS 147
Cdd:pfam00344 1 S L FA L GI M PYITASII M QLL G -- VV ISLE E LK K E GE E GR K K IN Q Y TRY L T V VL AL IQA I G IVLSL ------- GVYGG G GG 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 148 T YL I I A L V LT G GT A FLMWLGEQIT SH G V GNGIS I IIFAGIVA SI P KTIGQIYETQ F VG sndq LFIH I VKVA LL V I AI LAV 227
Cdd:pfam00344 72 F YL L I V L Q LT A GT M FLMWLGEQIT KY G I GNGIS L IIFAGIVA RL P SAFSGALIAL F RL ---- GARS I LPNL LL L I IT LAV 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 228 I VG V IFI QQA V R K I AI QYAK GTG rspag GGQS TH LPLK V N P AGVIP V IFA VAF L IT P R TIA S FFG TN dvtk W I QNYF D NT 307
Cdd:pfam00344 148 I AL V VYL QQA E R R I PV QYAK RVV ----- GGQS SY LPLK L N Y AGVIP I IFA SSL L SF P A TIA Q FFG LQ ---- F I AAAL D PG 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 308 H P VGMAI Y VA LII A F T YFY AFVQV NP EQM A D NLKKQGG Y IPG V RPGK M T QDRITSILY R L T FV G SI FL AV I SI LP IFFIQ 387
Cdd:pfam00344 219 S P LYTVL Y AL LII F F A YFY TAITF NP KDI A E NLKKQGG F IPG I RPGK P T AKYLDRVIP R I T LL G AL FL GI I AV LP DLLGA 298
330 340
....*....|....*....|....*.
gi 518087074 388 FA G L P QS aq I GGTSLLIVVGVAL E T M 413
Cdd:pfam00344 299 LT G V P FG -- F GGTSLLIVVGVAL D T Y 322
secY
CHL00161 preprotein translocase subunit SecY; Validated
12-430
7.34e-90
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 278.42
E-value: 7.34e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 12 SDIR N KII FTL LM L IVF R I G A FIPVP YVNAEA L - QAQ S QMGVFD LLNTF G GG ALYQFSI FA M GI T PYI T ASIIIQLL q MD 90
Cdd:CHL00161 8 DELL N RLL FTL GL L LLI R L G T FIPVP GIDHTQ L y PSL S NNPLLN LLNTF S GG GFFVIGL FA L GI L PYI N ASIIIQLL - TS 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 91 VV P KFTEWS K - Q GE V GRRK LA Q F TRY F T IVLGF IQ AL G M S YGFNNLANGM lieks GISTY L I I A L V LT G G TAFLM WL G E Q 169
Cdd:CHL00161 87 II P SLEKLQ K e E GE A GRRK IN Q Y TRY L T LGWAI IQ SI G I S FWLKPYLFNW ----- NLLLA L E I V L A LT S G SMIVL WL S E L 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 170 IT SH G V GNG I S II IF AG IV ASI PK TIGQ iyetq FVG S NDQ l F I H I VKVA LL VIAILAVIV G V IF I Q Q A V RKI AIQY AK GT 249
Cdd:CHL00161 162 IT EK G L GNG S S LL IF FN IV SNL PK LLQS ----- LLF S LSA - N I T I LSIL LL LFLFFITLI G I IF L Q E A I RKI PLIS AK QL 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 250 G R S PAGGGQ S t H LPL KV N P AGV I P V IFA V A F L IT P RTIA s FFGT N DVTKWIQNY F DNTHPVG --- MAI Y VA LI IA F T YFY 326
Cdd:CHL00161 236 G K S SRLASN S - Y LPL RL N Q AGV M P I IFA S A L L VL P GYLT - NILL N QFLLPLLSL F LQLASFK ily LVL Y FV LI LF F S YFY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 327 AFVQV NP EQMAD NL K K QGGY IPG V RPGK M T QDRITSI L Y RLT FV G SI FLA V I SI LP IFFIQFAG L PQSAQI G G TSLLI V V 406
Cdd:CHL00161 314 STIVL NP KDISE NL Q K MAVS IPG I RPGK A T TKYLKKT L N RLT LL G AL FLA F I AL LP NLIESVLN L SVFKGL G T TSLLI L V 393
410 420
....*....|....*....|....
gi 518087074 407 GVA LE T MK Q LESQ L VKR NY RGFMK 430
Cdd:CHL00161 394 GVA ID T SR Q IQTY L ISN NY ENMYD 417
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
17-431
9.58e-48
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 168.25
E-value: 9.58e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 17 KI I FT LLM L IVFRI G AF I PV P Y V NAEALQAQSQ m GVFDLLNTFG GG A L YQFS IF AM G IT P YI T AS II I QL LQ mdv VP K FT 96
Cdd:PRK12417 15 KI L FT CFI L FIYIL G SN I SI P F V SYNDMLGGHE - SFLKIAAANT GG D L RTLN IF SL G LG P WM T SM II L QL FS --- YR K RD 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 97 EWS KQ G evg RRKLAQFT R YF T IVLGF IQ A L GMSYGF nnlang MLI E KSGISTY L IIA L V L TG GT A FL M WL GEQITSH G V G 176
Cdd:PRK12417 91 GLM KQ T --- IEEQHYRE R IL T LIIAV IQ S L AVILSL ------ PSK E RISQTNI L LNT L I L VT GT M FL V WL SDLNARY G I G 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 177 n G ISI I IFAGIVA SIP KTI gqiyetqfvgsnd QLF I HIVKVALLVIAI L AV I VGVIFIQQAVRKIA I Q Y AKGTGRSPAG g 256
Cdd:PRK12417 162 - G PMP I VLVSMIK SIP QDV ------------- IEY I DASHIVIILLIL L VI I TLFFLYFIELVEYR I P Y NDIMNHNRFK - 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 257 g QSTH L PL K V NPAG VI P VIFAVAF L IT P RT ---- I A S F F GT N DVTKWIQNYFDNTH P V G MAI Y VA L IIAFT YF YA FV QV N 332
Cdd:PRK12417 227 - MYSY L SI K L NPAG GM P IMYSMSL L VF P QY iiil I L S I F PN N SGISADMDMLSFGS P L G VTV Y LI L QFLLS YF FS FV NI N 305
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 333 PE Q M A DNLK K Q G G YIPGV R PGK M T QDRITS I LY R LTFV G SI F LA VI SIL P IF F IQ F - AG L PQSAQIG G t SLLIV VG VALE 411
Cdd:PRK12417 306 TK Q I A KDML K S G N YIPGV Y PGK D T ERYLNY I AR R FSWF G AL F VT VI AGI P LY F TL F d PH L STEIYFS G - QFMMF VG MSFN 384
410 420
....*....|....*....|
gi 518087074 412 TMKQLESQ L VKRN Y RGFMKN 431
Cdd:PRK12417 385 IADEIRAL L YFDK Y KPLLNQ 404
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
17-429
5.21e-40
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 147.57
E-value: 5.21e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 17 KI I FT LLM LI VFRI G AF IP V P Y V -- NAEALQAQSQ m GV F DLLNTFG GG A L YQF SIF AM G IT P YI T AS II I QL LQ mdvvpk 94
Cdd:TIGR02920 5 KI L FT CFI LI IYVL G SY IP I P F V ev SKQDMEGVKN - SF F KIAIANT GG N L TTL SIF SL G LG P WM T SM II L QL FS ------ 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 95 FT EWSKQGEVGRRKLAQFT R YF T IVLGF IQ A L GMSYG F N N langmlie K S G I S TY -- L IIA L V L TG GT AF L M WL GEQITS 172
Cdd:TIGR02920 78 FT KSDGFDAQSPKEQQYRE R FL T LIIAI IQ G L AIIHS F T N -------- K N G L S DF nm L LAT L I L VT GT CL L V WL ADLNAK 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 173 H G V G n G ISI I IFAGIVAS IP KTIGQIYETQ fvgsndqlfi H I VKV ALL VIAI L AVIVGVI FI QQ A VRK I AIQYAKGTG RS 252
Cdd:TIGR02920 150 Y G I G - G SMP I VLVSMLKN IP SNVFELFQMS ---------- Y I WLI ALL ILLT L VALFLLA FI ER A EYR I PVNDISLHN RS 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 253 pagg GQSTH LP L K V NPAG VIPVIFAVAF L IT P RT ---- IASF F GTNDVTKWIQNY F DNTH PVG MA IY VA L IIAFT YF YA F 328
Cdd:TIGR02920 219 ---- NLMSY LP I K L NPAG GMMYMYVMSL L ML P QY iiil LGRI F PNSSLINNWVFQ F SFSS PVG IL IY LI L QMLLS YF FT F 294
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 329 V QV NP EQMADNLK K Q G G YIPG VR PGK M TQ DRITSILY R LTFV G SI F L A VISIL P IF F IQ F AGLPQSAQIGGTSLLIVV G V 408
Cdd:TIGR02920 295 V NI NP KEISKSFR K S G N YIPG IA PGK D TQ RYLNRLAR R FCWF G GV F N A FQLGI P LY F AL F VPHLLTEAYIPGQFMMIT G M 374
410 420
....*....|....*....|.
gi 518087074 409 ALETMKQLESQ L VKRN Y RGFM 429
Cdd:TIGR02920 375 SFNIADEIRTI L YFDR Y KPLL 395
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
15-410
1.45e-16
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 81.42
E-value: 1.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 15 RN K IIF T LLM LI VFR I GAF IP V p Y vnae ALQAQ SQ m GV F D LL NTFGG G A ly QFSIFAM GI T P YI TA S II I QLL ------ Q 88
Cdd:PRK08568 27 KE K LKW T AIV LI LYF I LTN IP L - Y ---- GISQS SQ - DL F E LL RIIFA G S -- FGTLLQL GI G P IV TA G II L QLL vgskli N 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 89 M D V vpkftewsk QGEVG R RKLAQFTRYFT IV LGFIQ A LGMSYGFNNLANGM L I ek S GISTY L I I A L V L TG G TAFLMW L G E 168
Cdd:PRK08568 99 L D L --------- SDPED R ALFQGLQKLLA IV MIALE A APFVLAGAFGPATG L A -- S TPLLA L L I F L Q L FL G GILIIL L D E 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 169 QITSH G V G N GIS II I F AG I ------------ VASIPKTI G Q I YE -- TQFVGS N DQ L FIHIVKVA LL VIAILAV IV g VIF I 234
Cdd:PRK08568 168 LVSKW G I G S GIS LF I L AG V sqtifvglfnwl TGGQGLPV G F I PA lf SAITSG N LT L ALLLTTRG LL LLGLITT IV - IFL I 246
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 235 QQAVRKIAIQYAKGT GR SP agg G QSTHL PLK VNPAG V I PVI FAV A F -------- LITP R TIASFF GT ------------- 293
Cdd:PRK08568 247 VVYLESMRVEIPLSH GR VR --- G ARGRY PLK FIYVS V L PVI LVR A L qaniqlfg QLLQ R LGIPIL GT ydssgaspisgla 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 294 ------ NDVTK WIQ N yfdnth P VGMA IY VALI I AFTYFY A FVQ V ----- N P EQM A DN L KKQ G GY IPG V R PGKMTQDRITS 362
Cdd:PRK08568 324 yylspp HSPYD WIQ D ------ P LRAI IY ALFM I VLSILF A IFW V ettgl D P KTQ A RQ L QNS G MQ IPG F R RNPKVIEKVLE 397
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 518087074 363 - ILYRL T FV G SIFLAVISI L PIFF iqfaglpq S A QI GGT S LL IV V GVAL 410
Cdd:PRK08568 398 r YIPPV T VI G GAIVGLLAV L ADLL -------- G A LG GGT G LL LT V SIVY 438
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
14-279
6.74e-04
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 41.92
E-value: 6.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 14 IRN K IIF T LLM L I VF RIGAF IP V pyvnaealqaqsqmgv FDLLNTFGGGAL Y QF - S I F A -------- M GI T P YI T A S III 84
Cdd:PTZ00219 30 FKE K VLW T AIA L F VF LVCCQ IP L ---------------- YGIRSSSSSDPF Y WM r V I L A snrgtlme L GI S P IV T S S MVM 93
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 85 QLL QM dvv P K FTEWSKQGEVG R RKLAQFTRYFTIVLGFIQ A lg MS Y gfnn LAN GM L -- I EKS G ISTYLI I A L V L TGGTAF 162
Cdd:PTZ00219 94 QLL AG --- S K IIDVDQNNKED R ALFEGAQKLLGLLITLGE A -- VA Y ---- VWS GM Y gd I SEI G AGNAIL I I L Q L FFAGIV 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518087074 163 LMW L G E QITS - H G V G N GIS II I FAG I VAS I ------ P K TI GQIYE T Q F V G SNDQ LF --------- IHIV K V A LL ------ 220
Cdd:PTZ00219 165 VIL L D E LLQK g Y G L G S GIS LF I ATN I CET I iwkafs P T TI NTGRG T E F E G AIIA LF hllftrsdk LRAL K E A FY rphlpn 244
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518087074 221 --- VI A ILA V IVG VI FI Q QAVRKIAIQYA K gtgrspa GG GQ STHL P L K VNPAGV IP V I FAV A 279
Cdd:PTZ00219 245 ltn LL A TVL V FLV VI YF Q GFRVDLPLKSQ K ------- VR GQ QQSY P I K LFYTSN IP I I LQT A 299
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
