|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 682.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIMWGWW 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 661.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETgWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 641.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGwSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 609.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNpYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSL-LFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|....*
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREH 435
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTREN 434
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 536.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 3 KILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 83 NHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 163 VALLLLYQNTGTLSMLIIQYSHplnLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 243 GMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 323 VSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 517501790 403 ITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
3.59e-166 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 476.00 E-value: 3.59e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLD-PLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 320 HGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*.
gi 517501790 400 GTLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREH 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREH 436
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-424 |
1.79e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 368.01 E-value: 1.79e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 49 GWSASNPYMATDPLSTPLLVLTCWLLPLMILASQNHIKTepTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 129 PTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWgnkIWWAACLIAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 209 PLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 289 YSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 369 ALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHI 424
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFL 382
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
2.68e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 361.01 E-value: 2.68e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLwtittLQSLIIALTSFTWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00163 76 SESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIiqyshpLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFL------LNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
5.99e-116 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 347.88 E-value: 5.99e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPtIWLSPPKWLWTITTLQSLIIALTSFTWIkWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNL-YPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 161 LLVALLLLYQNTGTLSMLIIQYSHPLNLTSwgnKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 241 GYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 401 TLITAAYSLYLFLMTQRGPLPQHIINLQPYHTREHLLITLHLLPIILLIMKPEIMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-418 |
2.64e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 330.40 E-value: 2.64e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 8 TIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNPYMaTDPLSTPLLVLTCWLLPLMILASQNHIKT 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFS-FDSLSLPLIMLSFWISLLMVLASYKVFKS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 88 EPTNRqrSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLL 167
Cdd:MTH00205 84 NKNSK--LFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 168 LYQNTGTLSMLiiqYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRM 247
Cdd:MTH00205 162 LNSLNFSLSMF---FNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 248 MGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSAL 327
Cdd:MTH00205 239 TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 328 FCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAY 407
Cdd:MTH00205 319 FALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAY 398
|
410
....*....|.
gi 517501790 408 SLYLFLMTQRG 418
Cdd:MTH00205 399 SLYLYSQSQHG 409
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-434 |
1.37e-88 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 278.50 E-value: 1.37e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 9 IMLFPTIWLSPPKWLWTITTLQSLIIAL----------------TSFTWIKwPLETGWSasnpyMATDPLSTPLLVLTCW 72
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLyllagfdpgtggfqfvESYPWIP-SLGISYH-----LGVDGISLPLVLLTAL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 73 LLPLMILASQNHIKteptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLF 152
Cdd:COG1008 94 LTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 153 YTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHpLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVL 232
Cdd:COG1008 169 YTLAGSLLMLVAILALYFLAGALTFDIAELAA-APLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 233 AAVLLKLGGYGMLRMMGMLDPLPM-ELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLT 311
Cdd:COG1008 248 AGVLLKMGGYGLLRFALPLFPEASaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQ 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 312 GALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSP 391
Cdd:COG1008 328 GAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP 407
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 517501790 392 WTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPYHTRE 434
Cdd:COG1008 408 WLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-434 |
1.32e-83 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 265.91 E-value: 1.32e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 8 TIMLFPTIWLSP-----------------PKWLWTITTLQSLIIALtsFTWIKWPLETG---------WSAS---NPYMA 58
Cdd:PRK05846 2 NWPLLSLLIFLPliggllvllterfgarlARWIALIGTLLTLLLSL--VLWIGFDSSNAgfqfvekhpWIPRfgiSYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 59 TDPLSTPLLVLTCWLLPLMILASQNHIKteptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWG 138
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 139 nQTERLNAGTYFLFYTLVGSLPL----LVALLLLYQNTGTLSmliIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIH 214
Cdd:PRK05846 156 -GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFD---IADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 215 LWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLR-MMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVS 293
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 294 HMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPL 373
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 517501790 374 PNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPYHTRE 434
Cdd:PRK05846 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-426 |
9.38e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 250.24 E-value: 9.38e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 57 MATDPLSTPLLVLTCWLLPLMILASQNHIKteptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 137 WGNQTeRLNAGTYFLFYTLVGSLPLLVALLLLY-QNTGTLSMLIIQyshPLNLTSWGNKIWWAACLIAFLVKMPLYGIHL 215
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 216 WLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRM-MGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSH 294
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 295 MGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLP 374
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 517501790 375 NLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIIN 426
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
24-412 |
5.84e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 248.05 E-value: 5.84e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 24 WTITTLQSLIIALTSFTWI---KWPLETGWSASNP--------YMATDPLSTPLLVLTCWLLPLMILASQNHIKTeptnR 92
Cdd:MTH00204 35 WSLAILFSTLVLWGAFDGEgqfQFINLIEWIISPTlnfqwgplVFAVDGVSLFFILLTTLLIPICILISWKSIKF----L 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 93 QRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNT 172
Cdd:MTH00204 111 FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSIT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 173 GT---LSMLIIQYshPLNLTSWGnkiwWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMG 249
Cdd:MTH00204 191 GTtdyQILLNIKL--PLSIQKWL----LVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSW 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 250 MLDPLPMELMYPLIA-LALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF 328
Cdd:MTH00204 265 PLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 329 CLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYS 408
Cdd:MTH00204 345 IAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYS 424
|
....
gi 517501790 409 LYLF 412
Cdd:MTH00204 425 LYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
24-412 |
4.66e-73 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 238.03 E-value: 4.66e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 24 WTITTLQSLIIALTSF---------TWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILASQNHIKTeptnRQR 94
Cdd:MTH00217 34 WSLLTLTATILLWASFdgegqfqaiKKFEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIK 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 95 SYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGT 174
Cdd:MTH00217 110 EFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 175 LSMliiQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPL 254
Cdd:MTH00217 190 TDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPE 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 255 PMELMYPLI-ALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANT 333
Cdd:MTH00217 267 ASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTF 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 517501790 334 TYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLF 412
Cdd:MTH00217 347 LYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.81e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.80 E-value: 2.81e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 113 ATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 193 NKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 273 TGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA-NTTYERTHSRTMILVRGLQI 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 517501790 352 IFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-411 |
4.36e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 222.87 E-value: 4.36e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 58 ATDPLSTPLLVLTCWLLPLMILASQNHIKTeptnRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRW 137
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 138 GNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGT---LSMLIIQYSHPLNLTSWgnkiWWAACLIAFLVKMPLYGIH 214
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 215 LWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYP-LIALALWGVIMTGTICLRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 294 HMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*...
gi 517501790 374 PNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYL 411
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-409 |
7.64e-54 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 187.93 E-value: 7.64e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 57 MATDPLSTPLLVLTCWLLPLMILASQNhiktePTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 137 WGNQtERLNAGTYFLFYTLVGSLPLLV--ALLLLYQNTGTLSML-IIQYSHPLNLTSWGnkiwWAACLIAFLVKMPLYGI 213
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVagLALALSGDTFTFDLAeLGAKSYPLALELLL----YAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRM-MGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSV 292
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 293 SHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPP 372
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPG 364
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 517501790 373 LPNLMGELMI---ITTMFNWSPW----TLVLTGAGTLITAAYSL 409
Cdd:PRK12561 365 MSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLL 408
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
1.83e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 176.88 E-value: 1.83e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEPtnRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 140 QtERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWwAACLIAFLVKMPLYGIHLWLPK 219
Cdd:COG0651 153 K-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAF-ALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 220 AHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPME--LMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPAlfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 298 VAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 517501790 378 GELMIITTMFNWSPWTLVLTGA-GTLITAAYSLYLFLMTQ 416
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLlSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-411 |
4.24e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 162.00 E-value: 4.24e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 106 FLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLllyqntgtLSMLIIQYSHP 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 186 LNLTSWGNKIwwaACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDplpMELMYPLIAL 265
Cdd:MTH00094 146 DFFLSWEMFF---ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLN---FVYNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 266 ALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 345
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 346 VRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYL 411
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFL 365
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
31-409 |
1.58e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 157.56 E-value: 1.58e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 31 SLIIALTSFTWIKWPLETGWSASNPYM------------------ATDPLSTPLLVLTCWLLPLMILASQNhikteptnr 92
Cdd:PRK02546 39 ALIVGLIDFLITVYAFYTGYDFSNPGLqlvesyswlpqlgltwsvGADGLSMPLILLTGFITTLAVLAAWP--------- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 93 qrsyITLLASLQTFLILA--------FGATELIMFYVMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLVGSLPLLVA 164
Cdd:PRK02546 110 ----VTFKPKLFYFLMLAmyggqiavFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 165 LLLLYQNTGTLSM---LIIQYSHPLNLTSWgnkiWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGG 241
Cdd:PRK02546 185 ALAMAFYGDTPTFdmtALAAKDFGLGFQLL----CYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 242 YGMLRM-MGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAH 320
Cdd:PRK02546 261 YALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISH 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 321 GLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTL------ 394
Cdd:PRK02546 341 GLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLpfrvvv 420
|
410
....*....|....*.
gi 517501790 395 -VLTGAGTLITAAYSL 409
Cdd:PRK02546 421 vFLAAVGVILTPIYLL 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-429 |
5.00e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 147.54 E-value: 5.00e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 54 NPYMATDPLSTPLLVLTCWLLPLMILASQNHIkteptNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLII 133
Cdd:PRK06473 72 SYHLGVDGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 134 ITRWGNQtERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSM-LIIQYSHPLNLTSwgNKIWWAACLIAFLVKMPLYG 212
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 213 IHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRM-MGMldpLPMELMYPLIALALWGVI--MTGTIC-LRQTDLKSLIA 288
Cdd:PRK06473 224 FHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGL---FPEAWVYLAPWLATWAVVsvLYGASCaIAQKDMKKMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 289 YSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGL---QIIFPLTATWWFISNL 365
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVM 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 517501790 366 ANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQP 429
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-409 |
1.85e-38 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 145.86 E-value: 1.85e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 60 DPLSTPLLVLTCWLLPLMILASQnhiktePTNRQ-RSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWG 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 139 NQtERLNAGTYFLFYTLVGSLPLLV--ALLLLY-QNTGTLSM-LIIQYSHPLNLtswgNKIWWAACLIAFLVKMPLYGIH 214
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIgvLGMGLYgSNEPTLNFeTLANQSYPVAL----EILFYIGFLIAYAVKLPIIPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 215 LWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYP-LIALALWGVIMTGTICLRQTDLKSLIAYSSVS 293
Cdd:CHL00011 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPwLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 294 HMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERThsRTMILVR--GLQIIFPLTATWWFISNLANLALP 371
Cdd:CHL00011 312 HMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 517501790 372 PLPNLMGELMI---ITTMFNWSPWT----LVLTGAGTLITAAYSL 409
Cdd:CHL00011 390 GMSGFVAELIVffgIITSQKYLLMPkiliTFVMAIGMILTPIYLL 434
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
8.55e-35 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 125.33 E-value: 8.55e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 1 MLKILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLETGWSASNPYMATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 517501790 81 SQNHIKTEPTNRQRSYITLLASLQTFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-412 |
1.43e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 120.37 E-value: 1.43e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 58 ATDPLSTPLLVLTCWLLPLMILASQnhikTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRW 137
Cdd:PRK08375 74 RADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 138 GNQtERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPlnltswGNKIWWAA---CLIAFLVKMPLYGIH 214
Cdd:PRK08375 150 GDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 215 LWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMM----GMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYS 290
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 291 SVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLAL 370
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 517501790 371 PPLPNLMGELMIITTMFN-WSPWTLVLTGAGTLITAAYSLYLF 412
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIW 425
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-423 |
5.48e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 119.05 E-value: 5.48e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 57 MATDPLSTPLLVLTCWLLPLMILASqnhikTEPTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITR 136
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 137 WGNQtERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYShPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLW 216
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAIS-TQNLSLNTQLILLTGLLLGFGIKIPLVPLHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 217 LPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPliALALWG---VIMTGTICLRQTDLKSLIAYSSVS 293
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 294 HMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRT-------MILVRGLqiifPLTATWWFISNLA 366
Cdd:PRK07363 306 HMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDldvlnglMNPIRGL----PLTSALLVLAGMA 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 517501790 367 NLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQH 423
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-409 |
1.18e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 118.15 E-value: 1.18e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 4 ILIPTIMLFPTIWLSPPKWLWTITTLQSLIIALTSFTWIKWPLET------GWSAsnPY---MATDPLSTPLLVLTCWLL 74
Cdd:PRK12667 18 FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPivylfgGWPA--PIgivYEVDLLGALLGLLTALVM 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 75 PLMILASQNHIKTEPTNRqrSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYT 154
Cdd:PRK12667 96 FLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 155 LVGSLPLLVALLLLYQNTGTLSM-----LIIQYSHPLNLTSWGNKIW-----WAACLIAFLVKMPLYGIHLWLPKAHVEA 224
Cdd:PRK12667 174 AVGTTLYFLALAFLYATFGTLNMadlsaKIRGLSFPLTGGLAGNPPLalgvaLALALWAFTIKAAIFPNHFWLPDAHPAA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 225 PVAGFMVLAAVLLKLGGYGMLRMM-------GMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGL 297
Cdd:PRK12667 254 PSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGY 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 298 VAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLM 377
Cdd:PRK12667 334 IFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFF 413
|
410 420 430
....*....|....*....|....*....|..
gi 517501790 378 GELMIITTMFNWSPWTLVLTGagtLITAAYSL 409
Cdd:PRK12667 414 SKLLLFNALLESGFYLPALVL---LIASAISL 442
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-396 |
2.48e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 105.40 E-value: 2.48e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLD--PLPMELMYPLIALALWGVIMTGTICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTAT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*...
gi 517501790 359 WWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVL 396
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-411 |
4.45e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 95.40 E-value: 4.45e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 90 TNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLY 169
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 170 QNTGTLSMLIIQYSHPLnltswgnkiwwAACLIA--FLVKMPLYGIHLWLPKAHVEA-PVAGfMVLAAVLLKLGGYGMLR 246
Cdd:PRK07234 169 QANGTFAFSGLATADPE-----------AFALIAlgLLVKGGIFVSGLWLPLTHSEAePPVS-ALLSGVVVKAGVFPLVR 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 247 MMGMLDPLPMELMYPLIALALWGVImtgtICLRQTDLKSLIAYSSVSHMGLVAGGiliqtpwGLTGALvLMIAHGLVSSA 326
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 327 LFCLANTTYERTHSRtmilvrgLQIIFPLTATWWFISnLANLALPPLPNLMG---ELMIITTMFNWSPWTLVLTGAGTLI 403
Cdd:PRK07234 305 LFLCAGALPSRNFTE-------LISQMLGIGKWIPLT-MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAA 376
|
....*...
gi 517501790 404 TAAYSLYL 411
Cdd:PRK07234 377 SFWKFIFL 384
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
7.57e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.95 E-value: 7.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 105 TFLIL------AFGATELIMFYVMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMl 178
Cdd:PRK12665 116 TYLILvagvsnAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNM- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 179 iIQYSHPL-NLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPlPME 257
Cdd:PRK12665 194 -ADLAVRLdELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 258 LMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYER 337
Cdd:PRK12665 272 LDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 517501790 338 THSRTMILVRGLQIIFPLTATWWFISNLaNLA-LPPLPNLMGELMIITTMFN---WSPWTLVltgAGTLITAAYSLY 410
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAGAEdgtWLAWALV---AGGVVTSLLTLY 424
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
3.38e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 89.81 E-value: 3.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALwGVIMTGTIC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 278 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA---NTTYERTHSRTMILVRGLQiifP 354
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---P 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 355 LTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWtLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPYHT 432
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVW-LVLAVLLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
89-413 |
1.05e-17 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 86.25 E-value: 1.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 89 PTNRQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLVGSLPLLVALLLL 168
Cdd:PRK12650 105 RKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 169 YQNTGTLSMLIIQYShplnlTSWGNKIWWAAcLIAFLVKMPLYG------IHLWLPKAHVEA-PVAGFMVLAAVLlKLGG 241
Cdd:PRK12650 183 ATQTGTTSLSGILHS-----DVWAEKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVSAFLHAAAVV-KAGI 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 242 YGMLRMMGMLDPLPMeLMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHG 321
Cdd:PRK12650 256 YLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 322 LVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF-----NWSPWTLVL 396
Cdd:PRK12650 335 LFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLV 414
|
330
....*....|....*...
gi 517501790 397 T-GAGTLITAAYSLYLFL 413
Cdd:PRK12650 415 GaALGAVFTFAYSARLVL 432
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-382 |
1.34e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.43 E-value: 1.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 111 FGATELIMFYVMFEATLIPTLIIITRwGNQTERLNAGTYFLFyTLVGSLPLLVALLLLYQNTGTLSMLIIqYSHPLNLTS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADI-SQGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 191 WGNKIWWAACLIAF-LVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPM-----------EL 258
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 259 MYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERT 338
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 517501790 339 HSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMI 382
Cdd:PRK08668 352 GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLI 395
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-411 |
2.21e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 81.35 E-value: 2.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 76 LMILASQNHIKTEPTNRqrsYITLlaslqtFLILAFGATELIM------FYVMFEATLIpTLIIITRWGNQTERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDK---YAML------FLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 150 FLFYTLVGSLPLLVALLLLYQNTGTLSML-IIQYSHPLNLTSwgNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAPVAG 228
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAhIAQLAGTIDPTV--AQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 229 FMVLAAVLLKLGGYGMLRMMGMLDPLP--MELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQT 306
Cdd:PRK08377 241 TVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGT 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 307 PWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTM 386
Cdd:PRK08377 321 QAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAG 400
|
330 340
....*....|....*....|....*.
gi 517501790 387 FNWS-PWTLVLTGAGTLITAAYSLYL 411
Cdd:PRK08377 401 LSAGyTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-433 |
2.65e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 81.15 E-value: 2.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 92 RQRSYITLLASLQTFLILAFGATELIMFYVMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQN 171
Cdd:PRK12663 106 RRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 172 TGTLSMLII-----QYSHPLNLTswgnkIWWAACLIAFLVKMPLYGIHlWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLR 246
Cdd:PRK12663 185 FGTLNMAHIamrlnDMGDTATLT-----TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 247 MMGMLDPLPMELMYPLIALALWGVIMTGTI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSS 325
Cdd:PRK12663 259 VFTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKT 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 326 ALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITA 405
Cdd:PRK12663 339 ALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLIT 418
|
330 340
....*....|....*....|....*....
gi 517501790 406 AYSLY-LFLMTQRGPLPQHIINLQPYHTR 433
Cdd:PRK12663 419 MYSLFrIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
60-387 |
4.01e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 80.93 E-value: 4.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEPTNRQRSYITLLASLQTF-LILAFGATELIMFYVMFEATLIPTLIIITRWG 138
Cdd:PRK08667 76 DRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 139 NQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWgnkiwwAACLIAFLVKMPLYGIHLWLP 218
Cdd:PRK08667 156 QEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 219 KAHVEAPVAGFMVLAAVLLKLGGYGMLR-MMGMLDPlpmELMYPLIAL------ALWGVIMTgticLRQTDLKSLIAYSS 291
Cdd:PRK08667 230 YAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSP---ELWWGVLILlagsisALLGVIYA----LKEHDLKGLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 292 VSHMGLVAGGILIQTPWGLTG-----------ALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWW 360
Cdd:PRK08667 303 IENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....*..
gi 517501790 361 FISNLANLALPPLPNLMGELMIITTMF 387
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
4.65e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 74.42 E-value: 4.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAhVEAP--VAGFMvLAAVLLKLGGYGMLRMMGMLDPLPMeLMYPLIALALWGVIMTGTICLRQTDLKSLIAYSS 291
Cdd:COG1009 231 HFWLPDA-MEGPtpVSALL-HAATMVKAGVYLLARLSPLFALSPV-WLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 292 VSHMGLVAGGILIQtpwGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALP 371
Cdd:COG1009 308 VSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIP 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 372 PLPNLMGELMIITTMF---NWSPWTLVLTGAGTLITAAYSLYLFLMT----QRGPLPQHI 424
Cdd:COG1009 385 PFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
115-414 |
3.50e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.28 E-value: 3.50e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 115 ELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWgNK 194
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVV-AK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 195 IWWAACLIAFLVKMPLYGIHLWLPKAHVEAPvAGFMVLAAVLLKLGGYGMLRMMGMLDPL---PMELMYPLIALALWGVI 271
Cdd:PRK08376 221 IALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFSIYGPainLATVGWVIIILGCLTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 272 MTGTICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWG---LTGALVLMIAHGLVSSALFCLANTTYERTH 339
Cdd:PRK08376 300 VGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETG 379
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 340 SRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGT-LITAAYSLYLFLM 414
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSvLTLASFVKVFHTA 455
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-431 |
4.48e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 68.24 E-value: 4.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 117 IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSML-IIQYSHPLNLTSWGNKI 195
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeILGQADHIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 196 WWAACLIAFlVKMPLYGIHLWLPKA-HVEAPVAGFMvLAAVLLKLGGYGMLRMMGMLDpLPMELMYPLIALALWGVIMTG 274
Cdd:PRK12646 213 IFMFLLGAF-TKSAQFPFHIWLPRAmAAPTPVSAYL-HSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 275 TICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG---------LTGALVLMIAHGLVSSALFCLANTTYERTHS 340
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGT 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 341 RTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN---WSPWTLVLTGAGTLI-------TAAYSLY 410
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqLSQFSLISMIIIVFIgviasifTFTYALY 449
|
330 340
....*....|....*....|.
gi 517501790 411 LFLMTQRGPLPQHIINLQPYH 431
Cdd:PRK12646 450 MVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-387 |
4.60e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 67.67 E-value: 4.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 49 GWSAsnPY---MATDPLSTPLLVLTCWLLPLMILASqnhIKTEPTNRQRSYI-TLLASLQTFLILAFGATELIMFYVMFE 124
Cdd:PRK07691 64 NWKA--PFgivFVADMFAALLVLTSSIITFLVILYS---FQTIGIERERYYYyPSVLFMLAGVNGAFLTGDIFNLFVFFE 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 125 ATLIPTLIIITRWGNQTERLNAGTYFLFyTLVGSLPLLVALLLLYQNTGTLSMLIIqySHPLNLTSWGNK----IWWAAC 200
Cdd:PRK07691 139 VMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADI--SVKIAELSAGQTglitVVAILF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIA-LALWGVIMTGTICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILiLALLTIIFGVIGAVA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
330 340
....*....|....*....|....*...
gi 517501790 360 WFISNLANLALPPLPNLMGELMIITTMF 387
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-409 |
1.33e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 66.29 E-value: 1.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 9 IMLFPTIWLSPPKWLWTITTLQSLIIALTSfTWIKWPLETGwSASNPYMATDPLSTPLLVLTCWLLPLMILASQNHIKTE 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALAL-LLLALGGGTG-TAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 89 PTNRQRSYITLLASLQTFLILAfGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLL 168
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 169 YQNTGTLSmlIIQYSHPLNLTSWGNKIWWAAC---LIAFLVKMPLYGIHLWLPKAHVEAP--VAGFMvlaAVLLKLGGYG 243
Cdd:COG1007 177 YGATGSLN--LAGIAAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPtpVTAFL---ATAPKIAAFA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 244 ML-R-MMGMLDPLPMELMYPLIALALwgVIMT-GTIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIA 319
Cdd:COG1007 252 ALlRlLVEAFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLA 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 320 HGLVSSALF-CLANTTYERTHSRTMILVRGLQIIFPLTATWWFISnLANLA-LPPLPNLMGELMIITTMFNWSPWTLVLT 397
Cdd:COG1007 330 YLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF-LLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVI 408
|
410
....*....|...
gi 517501790 398 GA-GTLITAAYSL 409
Cdd:COG1007 409 AVlNSVISAYYYL 421
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-414 |
1.58e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 65.99 E-value: 1.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 113 ATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLiiqyshPLNLTSWG 192
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV------SGGLFSKN 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 193 NKIWWAACLIAFLVKMPLYGIHLWLPKAHV-EAPVAGfMVLAAVLLKLGGYGMLRMMGMLDPLPMELMY-----PLIALA 266
Cdd:PRK06589 209 QSIILLLMFIYGIAKTAIFPVHSWLPAAMVaHYPVSA-LLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIP 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 267 LWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILV 346
Cdd:PRK06589 288 IVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKL 367
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 347 RGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWS-PWTLVLTGAGTLITAAY-SLYLFLM 414
Cdd:PRK06589 368 HGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNqPWLSIIVMLVVIASSILsALYLLKI 437
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
169-388 |
3.33e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 65.23 E-value: 3.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 169 YQNTGTLSMLIIqySHPLNLTSWGNKIWWAAcLIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMM 248
Cdd:PRK08042 158 WQRYGTLDLRLL--DMRMQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 249 GMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGLTGALVLM 317
Cdd:PRK08042 235 LLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHL 314
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 517501790 318 IAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFN 388
Cdd:PRK08042 315 LNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-373 |
5.35e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.91 E-value: 5.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 208 MPLygiHLWLPKAHVEAP--VAGFMvlAAVLLKLGGYGMLRMMgmLDPLPMELM---YPLIAL----ALWGVIMTgticL 278
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPshVSALM--SGVMLKVAIYGILRVV--FDLLGAPGWwwgVLVLALgaisAVLGVLYA----L 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 279 RQTDLKSLIAYSSVSHMGLV-----------AGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVR 347
Cdd:PRK06521 296 AEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLG 375
|
170 180
....*....|....*....|....*.
gi 517501790 348 GLQIIFPLTATWWFISNLANLALPPL 373
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
1.72e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.40 E-value: 1.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAhVEAP--VAGFMvLAAVLLKLGGYGMLRMmgmlDPLPMELMYPLIALALWGV---IMTGTICLRQTDLKSLIA 288
Cdd:PRK12647 215 HFWLPNA-MEAPtpVSAYL-HSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 289 YSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANL 368
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
170 180 190
....*....|....*....|....*....|....
gi 517501790 369 ALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTL 402
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-331 |
2.58e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.44 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 120 YVMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSM----LIIQyshPLnltsWGNKI 195
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMgdmfLIIQ---DL----PTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 196 WWAACLIAFL---VKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMG-------MLDPLPMELMypLIAL 265
Cdd:PRK12662 208 IQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNV--FMIL 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 266 ALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLA 331
Cdd:PRK12662 286 AALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
106-346 |
2.88e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 61.86 E-value: 2.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 106 FLILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSmliiqYSHP 185
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 186 LNLTSWGNKIWWAACLIaFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLdpLPMELMYPLIAL 265
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI--FSGSFLGYLFLC 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 266 ALWGVIMTGTIClRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMIL 345
Cdd:MTH00062 235 CLFSVFFLITAC-SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
.
gi 517501790 346 V 346
Cdd:MTH00062 314 L 314
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
60-402 |
1.37e-09 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 59.99 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 60 DPLSTPLL---VLTCWLLPL-----MILASQNHIKTEPTNRQRSYITLLASLQTFLILAfgaTELIMFYVMFEATLIPTL 131
Cdd:PRK06525 74 DPVSVLIGfvvVLLGLLVTLystgyMSPGNREHPVHEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 132 IIITRWGNQTERLNAGTYFLFyTLVGSLPLLVALLLLYQNTGTLSMLIIQyshplNLTSWGNKIWWAACLIAFLVKMPLY 211
Cdd:PRK06525 151 ALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 212 GIHLWLPKAhVEAPVAGFMVL-AAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYS 290
Cdd:PRK06525 225 PFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 291 SVSHMGLVAGGILIQ---TPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLAN 367
Cdd:PRK06525 304 TITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAI 383
|
330 340 350
....*....|....*....|....*....|....*
gi 517501790 368 LALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTL 402
Cdd:PRK06525 384 TGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
219-383 |
1.00e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.35 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 219 KAHVEAPVAGFMVLAAVLLKLGgygMLRMMGMLDPLPMELMYpLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLV 298
Cdd:PRK06277 230 KPFGSALLQTFSKFVLVALMLV---IFKLFGGLSYFPSAQGV-LIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYV 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 299 AGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMG 378
Cdd:PRK06277 306 AAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQS 385
|
....*
gi 517501790 379 ELMII 383
Cdd:PRK06277 386 KLMLA 390
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
3.56e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.09 E-value: 3.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAhVEAP--VAGFMvLAAVLLKLGGYGMLRMMGMLDPLPmELMYPLIALALWGVIMTGTICL 278
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPtpVSAYL-HAAAMVKAGIYLVARLAPGFADVP-VWRPTVLVLGLATMLLGGWRAL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTAT 358
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAV 366
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 359 WWFISNLANLALPPLPNLMGELMIITTMFN------WSPWTLVLTGAGTLITAAYSLY 410
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-328 |
5.19e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.83 E-value: 5.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAH--VEAPVAGFMvlaAVLLKLGGYGM-LRMMGM-LDPLPMELMYPLIALALWGVIMTGTI 276
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYegAPTPVTAFL---ATAPKIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 517501790 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF 328
Cdd:PRK05777 288 ALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
138-403 |
9.24e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 54.47 E-value: 9.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 138 GNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSM----LIIQYSHPLNLTswgnkIWWAAC---LIAFLVKMPL 210
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMadlaQRIAQLPAADRA-----LLEAGAallLVVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 211 YGIHLWLPKAHVEA--PVAGfmvLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALWGV----IMTGTI-CLRQTDL 283
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFGAIgVLAAQRL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 284 KSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTyERTHS-------RTMILVRGLQIIFPLT 356
Cdd:PRK12666 304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADLV-ERQRGaaadrlaVTPELYDLDEEEEEEV 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 357 ATW-----------WFISNLANLALPPLPNLMGELMIITTMFN-------WSPWTLVL-TGAGTLI 403
Cdd:PRK12666 383 GVAipatmallgllFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWALVLlSGLAALI 448
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
7.96e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 51.56 E-value: 7.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 197 WAACLIAFLV------KMPLYGIHLWLPKAhVEAPV-------AGFMVLAAVLLklggygMLRMMGMLDPLPMELMYpli 263
Cdd:PRK07376 224 WLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL------VARMYPVFEQFPAVMTV--- 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 264 aLALWGVI---MTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwglTGALVLMIAHGLVSSALFCLANTT------ 334
Cdd:PRK07376 294 -IAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSVihgmee 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 335 ---YERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSP--WTLVLTGAGtlITAAYSL 409
Cdd:PRK07376 370 vvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAG--MTAFYMF 447
|
....*....
gi 517501790 410 YLFLMTQRG 418
Cdd:PRK07376 448 RMYFLTFEG 456
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
2.09e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.34 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 60 DPLSTPLLVLTCWLLPLMILASQNHIKTEP-TNRQRSYITLLASLQTFLILAFGATELimfYVMFEATLIPTLIIITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 139 NQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQ-------------YSHPLNLTSWGNkiwWAACLIAFL 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAP---FAIIGILLL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 206 V----KMPLYGIHLWLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALwGVIMTGTICLRQT 281
Cdd:MTH00032 233 IgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL-TAFFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 282 DLKSLIAYSSVSHMGLVAGGILIQTPWGLtgALVLMIAHGLVSSALFCLA-----NTTYERTHSRTMilvRGLQIIFPLT 356
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFT 386
|
330 340
....*....|....*....|....*..
gi 517501790 357 ATWWFISNLANLALPPLPNLMGELMII 383
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-415 |
2.78e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.69 E-value: 2.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 212 GIHLWLPKAhVEAPV-------AGFMVLAAVLLklggygMLRMMGMLDPLPMELMYPLIALALwGVIMTGTICLRQTDLK 284
Cdd:MTH00020 228 GLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 285 SLIAYSSVSHMG--LVAGGIliqtpWGLTGALVLMIAHGLVSSALFCLANTT-YERTHSRTMILVRGLQIIFPLTATWWF 361
Cdd:MTH00020 300 KVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFL 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 362 ISNLANLALPPLPNLMGELMIITTMFNWSPWTLV--LTGAGTLITAAYSLYLFLMT 415
Cdd:MTH00020 375 IGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSIRLIYLT 430
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
216-430 |
3.76e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 49.26 E-value: 3.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 216 WLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYPLIALALwGVIMTGTICLRQTDLKSLIAYSSVSHM 295
Cdd:MTH00209 197 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSL-TTLMASMSANVESDLKKIIALSTLSQL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 296 GLVAGGILIQTPwglTGALVLMIAHGLVSSALF-CLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLP 374
Cdd:MTH00209 276 GLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 517501790 375 NLMGELMIITTMF--NWSPWTLVLTGAGTLITAAYSLYLFLMTQRGPLPQHIINLQPY 430
Cdd:MTH00209 353 GFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFD 410
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
96-407 |
4.75e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 48.79 E-value: 4.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 96 YITLLASLQTFLILAFgATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTL 175
Cdd:TIGR01770 105 YILLLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 176 SM-LIIQYSHPLNLTSWGNKIWWAACLIAFLVKMPLYGIHLWLPKAHVEAP--VAGFMVLAAvllKLGGYG-MLR-MMGM 250
Cdd:TIGR01770 184 NFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPtpVTAFFSIVP---KIAIFAvFLRlFLYI 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 251 LDPLPMELMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF-C 329
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgV 340
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 517501790 330 LANT-TYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMFNWSPWTLVLTGAGTLITAAY 407
Cdd:TIGR01770 341 LSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-411 |
6.15e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 48.67 E-value: 6.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 76 LMILASQNHIKTEPTNRQRSYITLLASLQTFLILAFGATELIMFyVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTL 155
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 156 VGSLPLLVALLLLYQNTGTLSMLIIQYSHPLNLTSWGNKIWWAACLIAFL---VKMPLYGIHLWLPKA-HVEAPVAGFMv 231
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNAmEAPTPVSAFL- 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 232 LAAVLLKLGGYGMLRMMGMLDPLPMELMYpLIALALWGVIMTGTICLRQTDLKSLIAYSSVS---HMGLVAGGILIQTP- 307
Cdd:PRK12649 252 HSATMVKAGVYLVARIHPIFSGTEAWFIL-VSGTGMITMVLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYTTYHEPg 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 308 WGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF 387
Cdd:PRK12649 331 LGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSV 410
|
330 340 350
....*....|....*....|....*....|..
gi 517501790 388 NWS-----PWTLVLTG---AGTLITAAYSLYL 411
Cdd:PRK12649 411 EMGaliggPFTIIIPAvavLGGVFTFAYSIKL 442
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
99-387 |
2.64e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.71 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 99 LLASLQTFLILA----FGATELIMFYVMFEATLIPTLIIITRWGNQTErlnAGTYFLFYTLVGSLPLLVALLLLYQNTGT 174
Cdd:PRK06459 73 WLSSLYILTILGmaivLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 175 LSMLIIQYSHPLNLTSWGnkiwwaacliaFLVKMPLYGIHL--WLPKAHVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLD 252
Cdd:PRK06459 150 TNFSYLPSPVPLILASFG-----------FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQ 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 253 PLPME-LMYPLIALALWGVIMTGTICLRQTDLKSLIAYSSVSHMG--LVAGGILIQTP--------WGLTGALVLMIAHG 321
Cdd:PRK06459 219 TIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGaiLVALGLYMVTKqlitsiehFSLITVILYSFAHS 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 322 LVSSALFCLANTTYERTHSRTMilvrglQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF 387
Cdd:PRK06459 299 VAKTGLFLSSGLQEKQSITYSK------KIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLF 358
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-328 |
8.86e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.64 E-value: 8.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 108 ILAFGATELIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLVGSLPLLVALLLLYQNTGTLSMLIIQYSHPLN 187
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 188 LTSWGNKIWWAACLI--AFLVKMPLYGIHLWLPKAHVEAPVAgFMVLAAVLLKLGGYGMLRMMGmldpLPMELmypLIAL 265
Cdd:MTH00196 87 QSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSILVSIG----LNVNI---LLIG 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 517501790 266 ALWGVIMTGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALF 328
Cdd:MTH00196 159 GLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-409 |
1.80e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 44.03 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAHVE-APVAGF-----MVLAAVLLklggygMLRMmgmldplpmelmYPliALA---LWGVIMTGT--------- 275
Cdd:PRK12648 227 HFWLPHAMAApTPVSAYlhsatMVKAGVFL------LARL------------WP--VLAgteEWFWIVGGAglitlllga 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 276 -ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFP 354
Cdd:PRK12648 287 yFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMP 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 517501790 355 LTATWWFISNLAnLALPPLPN--LMGELM----IITTMFNWSPWTL-VLTGAGTLITAAYSL 409
Cdd:PRK12648 367 ITATLAMVAAAA-MAGVPLLNgfLSKEMFfaetLDTHLLGSLDWLLpVAATLAGAFSVAYSL 427
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
2.52e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 43.36 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAhVEAPVAGFMVLAAVLLKLGGYGMLRMMGMLDPLPMELMYpLIALALWGVIMTGTICLRQTDLKSLIAYSSVS 293
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLALSPVALTV-LIVIGTVTAIGASLVAIAQIDIKRALSYSTSA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 294 HMGLVAGGILIQTPwglTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGLQIIFPLTATWWFISNLANLALPPL 373
Cdd:PRK07390 319 YLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPL 395
|
170 180
....*....|....*....|...
gi 517501790 374 PNLMGELMIITTMFNWSPWTLVL 396
Cdd:PRK07390 396 GGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
4.47e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.18 E-value: 4.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPKAHVEAPVAGFMVLAAVLlKLGgygMLRMMGMLDPLPmELMYPLIALALWGVIMTGTICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLY-WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 281 TDLKSLIAYSSVSHMGLVAGGILiqtpWGLTGALVLMIAHGLVSSALFCLANttYERTHSRTMILVRGLQIIFPLTATWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 517501790 361 FISnlanLA-LPPLPNLMGELMIITTMFNWSPWTLVLTG-AGTLITAAYSLYLFLM 414
Cdd:MTH00144 240 LLS----LGgLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-427 |
7.31e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 7.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 201 LIAFLVKMPLYGIHLWLPkaHVEAPVAGFMVLA-AVLLKLGGYGMLRMMGMLDPLPMELMypliaLALWGVIMTGTICLR 279
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSISWTLCLIlSTWQKIAPLSILFFFTSHNILPMMTS-----MAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 280 QTDLKSLIAYSSVSHMGLVAggiLIQTPWGLTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVRGlqiifPLTATW 359
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMS-----QTTSMS 239
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 360 WFISNLANLALPPLPNLMGELMIITTMFNWSP--WTLVLTgAGTLITAAYslYLFLMTQRGPLPQHIINL 427
Cdd:MTH00011 240 LFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMilILLVLI-VGSLMNLFY--YLNLIFNFMYLSPTFSSL 306
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-419 |
8.07e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 41.83 E-value: 8.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 214 HLWLPKAhVEAP--VAGFMvLAAVLLKLGGYGMLRMMgmldplpmelmyPLIALA---LWGVIMTGTICL--------RQ 280
Cdd:PRK12645 230 YIWLPDA-MEAPtpVSAYL-HSATMVKAGIYLVARFT------------PIFAGSqvwFWTVTLVGLITLfwgslnavKQ 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 281 TDLKSLIAYSSVSHMGLV-----AGGILIQTPWG--------LTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILVR 347
Cdd:PRK12645 296 TDLKGILAFSTVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLG 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 348 GLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTM--------FNWSPWTL---VLTGAGTLITAAYSLYLFLMTQ 416
Cdd:PRK12645 376 GLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateanlFSLDTWGVlfpVIAWVASVFTFVYSIIFIFKTF 455
|
...
gi 517501790 417 RGP 419
Cdd:PRK12645 456 FGK 458
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
200-415 |
1.35e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.09 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 200 CLIAFLVKMPLYGIHLWLPKAhVEAPV-------AGFMVLAAVLLklggygMLRMMGMLDPLPMELMYPLIALALwGVIM 272
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSA-MEGPTpvsallhSSTMVVAGVFL------LIRLSPLFQNNQLILGAVLLLGAL-TMLF 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517501790 273 TGTICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPwglTGALVLMIAHGLVSSALF----CLANTTYERTHSRTMilvRG 348
Cdd:MTH00211 282 GALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP---QLAFLHICTHAFFKAMLFmcsgSIIHGLNNEQDIRKM---GG 355
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 517501790 349 LQIIFPLTATWWFISNLANLALPPLPNLMGELMIITTMF--NWSPWTLVLTGAGTLITAAYSLYLFLMT 415
Cdd:MTH00211 356 LSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNgsYLNAWALLLTLLATSLTAAYSFRLIFLS 424
|
|
| |
