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Conserved domains on  [gi|515356404|ref|WP_016865624|]
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MULTISPECIES: zinc-dependent metalloprotease [Fischerella]

Protein Classification

zinc-dependent metalloprotease( domain architecture ID 12182352)

zinc-dependent metalloprotease containing DUF5118, DUF5117 and DUF4953 domains, contains the extended met-zincin motif HExxHxxGxxH/D, with the first two histidines acting as ligands of the catalytic zinc, the glutamate as the general base, a strictly conserved glycine, and a third zinc-binding histidine or aspartate

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4953 pfam16313
Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic ...
 483-815 6.54e-97

Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.


:

Pssm-ID: 435269  Cd Length: 319  Bit Score: 306.49  E-value: 6.54e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  483 TSDEMKEYVHQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQGDY---FP 559
Cdd:pfam16313   1 KMPFPDELMGALLRFVSAHEVGHTLGLRHNFAASSAYPVDSLRDKSFTRKYGTTPSIMDYARFNYVAQPEDQIDLsglYP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  560 AVVGPYDEWAIEYGYKPHPDfsveAMMPEAEKPFLEKIALAS-PQPELSYATDEDIWDINPLANVWDMSSDVLVYSQWQM 638
Cdd:pfam16313  81 PGIGPYDKWAIEWGYRPFPD----AKTPEEEKAALDKWAERSaGDPGLRFGTDQDARGADPRAQTEDLGDDAVKASEYGI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  639 DNARAMWQRLDLH-YPLRGESYSDLRVLFSSILRYYFRNASLLTQYIAGQSFGRHHADESMRPsFVPVSLEQQRQVLAKL 717
Cdd:pfam16313 157 KNLKRILPNLPEWtAEKEGEDYSDLEELYVPVLLQYRRYIGHVAKNIGGVYYNYKVRGDPGPV-YTPVPKEKQKEALDFL 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  718 QEYVFAedafsFPPQLLNQlapsrwqhwgNFIP-VSRLDYPIHERIQRFQAVILRSLLDSDRLNRLRDIEFKtPPGQALS 796
Cdd:pfam16313 236 LKQLFE-----TPEWLLDP----------NLLNkTRGLDFDPHDRVEALQSRVLSALLSPGRLNRLVEQEAR-DGDKAYT 299

                         330
                  ....*....|....*....
gi 515356404  797 MPVLFSTLQEDIWTEVVNT 815
Cdd:pfam16313 300 LAELLDDLRKGIFKELEKA 318
ZnMc_MMP_like_2 cd04276
Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase ...
 315-576 3.39e-92

Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase domains similar to matrix metalloproteinases and astacin.


:

Pssm-ID: 239803  Cd Length: 197  Bit Score: 289.61  E-value: 3.39e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 315 APLSPPKKPIVFWIENAVPLEYRDAIREGVLMWNQAFAKAGFQNAIEVRQMPDDAdwHPADVRYNTIRWFNSLDAGFARG 394
Cdd:cd04276    1 AALSEPKEPIVYYLDNTFPEKYRDAIREGVLYWNKAFEKAGFKNAIIVKVLPDDA--DPGDIRYNVIRWIHSPNGGWAYG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 395 PARVNPLTGEILDADIIVDANMVRSIQQEYRALIAekvgaehlgdcgvmpnsqfpiqnsdsdicygaefsdqaamgalal 474
Cdd:cd04276   79 PSVVDPRTGEILKADVILYSGFLRQDQLWYEDLLA--------------------------------------------- 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 475 sllqnatptsdemkeyvhQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQ 554
Cdd:cd04276  114 ------------------ASLRYLLAHEVGHTLGLRHNFKASSDGSNEELEDPLGTKEKGATSSVMDYPPPNVAAQGEDQ 175

                        250       260
                 ....*....|....*....|..
gi 515356404 555 GDYFPAVVGPYDEWAIEYGYKP 576
Cdd:cd04276  176 GDYYPPTIGPYDKWAIEYGYTP 197
DUF5117 pfam17148
Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.
 124-311 3.26e-37

Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.


:

Pssm-ID: 465363  Cd Length: 189  Bit Score: 138.13  E-value: 3.26e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  124 LQDFLFYFRRVNNRLHFVVRNVKFR---TEQDEPELRSLARSFSDSVLYALEIDSIDPYSKNILINLNHLLMQDFPGLTS 200
Cdd:pfam17148   4 VNEQVIRFEKGGNDKLLLLRNVSYRnvaPDSDAAIAKAVKNSNLDPILAAFDIKAYNKDSSAVVIDVTDFFNGDNKLFSP 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  201 LLKYYLRADY--RLEENTSYFGDVGSFPFNLEIESVYSFSSPEGAYLVtlpdsrALTLKVHYSFSQLPENNgYIPRLADD 278
Cdd:pfam17148  84 LLPRSKNGLGlgSLDSDRSYIESIKAFPDNIEIRSVLTYTVPGGSSSG------PVTVEVNTSLVLLPEEP-MKPRLADP 156

                         170       180       190
                  ....*....|....*....|....*....|...
gi 515356404  279 RVGYFITAFQDFSKNNGKEPFVRYINRWHLEPS 311
Cdd:pfam17148 157 RVGYFTTSYTDFSDDQQKVETKRYITRWRLEPK 189
DUF5118 pfam17162
Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.
 65-112 1.58e-03

Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.


:

Pssm-ID: 435758  Cd Length: 50  Bit Score: 37.13  E-value: 1.58e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 515356404   65 YREAIKGTDKL-EGLFTIYRgeEDSKIYLELKPEQLNKNYLCTVTLESG 112
Cdd:pfam17162   4 YDKVIKKKAKTkKGLFTVHK--KDDKYYFEIPDSLLGRDMLVVTRIAKT 50
 
Name Accession Description Interval E-value
DUF4953 pfam16313
Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic ...
 483-815 6.54e-97

Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.


Pssm-ID: 435269  Cd Length: 319  Bit Score: 306.49  E-value: 6.54e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  483 TSDEMKEYVHQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQGDY---FP 559
Cdd:pfam16313   1 KMPFPDELMGALLRFVSAHEVGHTLGLRHNFAASSAYPVDSLRDKSFTRKYGTTPSIMDYARFNYVAQPEDQIDLsglYP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  560 AVVGPYDEWAIEYGYKPHPDfsveAMMPEAEKPFLEKIALAS-PQPELSYATDEDIWDINPLANVWDMSSDVLVYSQWQM 638
Cdd:pfam16313  81 PGIGPYDKWAIEWGYRPFPD----AKTPEEEKAALDKWAERSaGDPGLRFGTDQDARGADPRAQTEDLGDDAVKASEYGI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  639 DNARAMWQRLDLH-YPLRGESYSDLRVLFSSILRYYFRNASLLTQYIAGQSFGRHHADESMRPsFVPVSLEQQRQVLAKL 717
Cdd:pfam16313 157 KNLKRILPNLPEWtAEKEGEDYSDLEELYVPVLLQYRRYIGHVAKNIGGVYYNYKVRGDPGPV-YTPVPKEKQKEALDFL 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  718 QEYVFAedafsFPPQLLNQlapsrwqhwgNFIP-VSRLDYPIHERIQRFQAVILRSLLDSDRLNRLRDIEFKtPPGQALS 796
Cdd:pfam16313 236 LKQLFE-----TPEWLLDP----------NLLNkTRGLDFDPHDRVEALQSRVLSALLSPGRLNRLVEQEAR-DGDKAYT 299

                         330
                  ....*....|....*....
gi 515356404  797 MPVLFSTLQEDIWTEVVNT 815
Cdd:pfam16313 300 LAELLDDLRKGIFKELEKA 318
ZnMc_MMP_like_2 cd04276
Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase ...
 315-576 3.39e-92

Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase domains similar to matrix metalloproteinases and astacin.


Pssm-ID: 239803  Cd Length: 197  Bit Score: 289.61  E-value: 3.39e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 315 APLSPPKKPIVFWIENAVPLEYRDAIREGVLMWNQAFAKAGFQNAIEVRQMPDDAdwHPADVRYNTIRWFNSLDAGFARG 394
Cdd:cd04276    1 AALSEPKEPIVYYLDNTFPEKYRDAIREGVLYWNKAFEKAGFKNAIIVKVLPDDA--DPGDIRYNVIRWIHSPNGGWAYG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 395 PARVNPLTGEILDADIIVDANMVRSIQQEYRALIAekvgaehlgdcgvmpnsqfpiqnsdsdicygaefsdqaamgalal 474
Cdd:cd04276   79 PSVVDPRTGEILKADVILYSGFLRQDQLWYEDLLA--------------------------------------------- 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 475 sllqnatptsdemkeyvhQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQ 554
Cdd:cd04276  114 ------------------ASLRYLLAHEVGHTLGLRHNFKASSDGSNEELEDPLGTKEKGATSSVMDYPPPNVAAQGEDQ 175

                        250       260
                 ....*....|....*....|..
gi 515356404 555 GDYFPAVVGPYDEWAIEYGYKP 576
Cdd:cd04276  176 GDYYPPTIGPYDKWAIEYGYTP 197
DUF5117 pfam17148
Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.
 124-311 3.26e-37

Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.


Pssm-ID: 465363  Cd Length: 189  Bit Score: 138.13  E-value: 3.26e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  124 LQDFLFYFRRVNNRLHFVVRNVKFR---TEQDEPELRSLARSFSDSVLYALEIDSIDPYSKNILINLNHLLMQDFPGLTS 200
Cdd:pfam17148   4 VNEQVIRFEKGGNDKLLLLRNVSYRnvaPDSDAAIAKAVKNSNLDPILAAFDIKAYNKDSSAVVIDVTDFFNGDNKLFSP 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  201 LLKYYLRADY--RLEENTSYFGDVGSFPFNLEIESVYSFSSPEGAYLVtlpdsrALTLKVHYSFSQLPENNgYIPRLADD 278
Cdd:pfam17148  84 LLPRSKNGLGlgSLDSDRSYIESIKAFPDNIEIRSVLTYTVPGGSSSG------PVTVEVNTSLVLLPEEP-MKPRLADP 156

                         170       180       190
                  ....*....|....*....|....*....|...
gi 515356404  279 RVGYFITAFQDFSKNNGKEPFVRYINRWHLEPS 311
Cdd:pfam17148 157 RVGYFTTSYTDFSDDQQKVETKRYITRWRLEPK 189
DUF5118 pfam17162
Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.
 65-112 1.58e-03

Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.


Pssm-ID: 435758  Cd Length: 50  Bit Score: 37.13  E-value: 1.58e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 515356404   65 YREAIKGTDKL-EGLFTIYRgeEDSKIYLELKPEQLNKNYLCTVTLESG 112
Cdd:pfam17162   4 YDKVIKKKAKTkKGLFTVHK--KDDKYYFEIPDSLLGRDMLVVTRIAKT 50
 
Name Accession Description Interval E-value
DUF4953 pfam16313
Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic ...
 483-815 6.54e-97

Met-zincin; This is a family of uncharacterized proteins that carry the highly characteriztic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.


Pssm-ID: 435269  Cd Length: 319  Bit Score: 306.49  E-value: 6.54e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  483 TSDEMKEYVHQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQGDY---FP 559
Cdd:pfam16313   1 KMPFPDELMGALLRFVSAHEVGHTLGLRHNFAASSAYPVDSLRDKSFTRKYGTTPSIMDYARFNYVAQPEDQIDLsglYP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  560 AVVGPYDEWAIEYGYKPHPDfsveAMMPEAEKPFLEKIALAS-PQPELSYATDEDIWDINPLANVWDMSSDVLVYSQWQM 638
Cdd:pfam16313  81 PGIGPYDKWAIEWGYRPFPD----AKTPEEEKAALDKWAERSaGDPGLRFGTDQDARGADPRAQTEDLGDDAVKASEYGI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  639 DNARAMWQRLDLH-YPLRGESYSDLRVLFSSILRYYFRNASLLTQYIAGQSFGRHHADESMRPsFVPVSLEQQRQVLAKL 717
Cdd:pfam16313 157 KNLKRILPNLPEWtAEKEGEDYSDLEELYVPVLLQYRRYIGHVAKNIGGVYYNYKVRGDPGPV-YTPVPKEKQKEALDFL 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  718 QEYVFAedafsFPPQLLNQlapsrwqhwgNFIP-VSRLDYPIHERIQRFQAVILRSLLDSDRLNRLRDIEFKtPPGQALS 796
Cdd:pfam16313 236 LKQLFE-----TPEWLLDP----------NLLNkTRGLDFDPHDRVEALQSRVLSALLSPGRLNRLVEQEAR-DGDKAYT 299

                         330
                  ....*....|....*....
gi 515356404  797 MPVLFSTLQEDIWTEVVNT 815
Cdd:pfam16313 300 LAELLDDLRKGIFKELEKA 318
ZnMc_MMP_like_2 cd04276
Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase ...
 315-576 3.39e-92

Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase domains similar to matrix metalloproteinases and astacin.


Pssm-ID: 239803  Cd Length: 197  Bit Score: 289.61  E-value: 3.39e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 315 APLSPPKKPIVFWIENAVPLEYRDAIREGVLMWNQAFAKAGFQNAIEVRQMPDDAdwHPADVRYNTIRWFNSLDAGFARG 394
Cdd:cd04276    1 AALSEPKEPIVYYLDNTFPEKYRDAIREGVLYWNKAFEKAGFKNAIIVKVLPDDA--DPGDIRYNVIRWIHSPNGGWAYG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 395 PARVNPLTGEILDADIIVDANMVRSIQQEYRALIAekvgaehlgdcgvmpnsqfpiqnsdsdicygaefsdqaamgalal 474
Cdd:cd04276   79 PSVVDPRTGEILKADVILYSGFLRQDQLWYEDLLA--------------------------------------------- 113

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 475 sllqnatptsdemkeyvhQYIRSLIAHEVGHTLGLRHNFHGSTMLAPQELNNTEVTHTKGLVGSVMDYLPVNIAPQGTQQ 554
Cdd:cd04276  114 ------------------ASLRYLLAHEVGHTLGLRHNFKASSDGSNEELEDPLGTKEKGATSSVMDYPPPNVAAQGEDQ 175

                        250       260
                 ....*....|....*....|..
gi 515356404 555 GDYFPAVVGPYDEWAIEYGYKP 576
Cdd:cd04276  176 GDYYPPTIGPYDKWAIEYGYTP 197
ZnMc_MMP_like cd04268
Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix ...
 321-574 1.20e-46

Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases.


Pssm-ID: 239796 [Multi-domain]  Cd Length: 165  Bit Score: 164.21  E-value: 1.20e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 321 KKPIVFWIENAVPLEYRDAIREGVLMWNQAFAkAGFQNAIEVrqmpddadwHPADVRYNTIRWFNSLDAGFARGPARVNP 400
Cdd:cd04268    1 KKPITYYIDDSVPDKLRAAILDAIEAWNKAFA-IGFKNANDV---------DPADIRYSVIRWIPYNDGTWSYGPSQVDP 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 401 LTGEILDADIIVDANMVrsiqqeyraliaekvgaehlgdcgvmpnsqfpiqnsdsdicygaefsdqaamgalalsllqna 480
Cdd:cd04268   71 LTGEILLARVYLYSSFV--------------------------------------------------------------- 87

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404 481 tptsdemkEYVHQYIRSLIAHEVGHTLGLRHNFHGSTMlapqeLNNTEVTHTKGLVGSVMDYLPVNIAPqgtQQGDYFPA 560
Cdd:cd04268   88 --------EYSGARLRNTAEHELGHALGLRHNFAASDR-----DDNVDLLAEKGDTSSVMDYAPSNFSI---QLGDGQKY 151

                        250
                 ....*....|....
gi 515356404 561 VVGPYDEWAIEYGY 574
Cdd:cd04268  152 TIGPYDIAAIKKLY 165
DUF5117 pfam17148
Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.
 124-311 3.26e-37

Domain of unknown function (DUF5117); This domain may fall upstream of a met-zincin domain.


Pssm-ID: 465363  Cd Length: 189  Bit Score: 138.13  E-value: 3.26e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  124 LQDFLFYFRRVNNRLHFVVRNVKFR---TEQDEPELRSLARSFSDSVLYALEIDSIDPYSKNILINLNHLLMQDFPGLTS 200
Cdd:pfam17148   4 VNEQVIRFEKGGNDKLLLLRNVSYRnvaPDSDAAIAKAVKNSNLDPILAAFDIKAYNKDSSAVVIDVTDFFNGDNKLFSP 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515356404  201 LLKYYLRADY--RLEENTSYFGDVGSFPFNLEIESVYSFSSPEGAYLVtlpdsrALTLKVHYSFSQLPENNgYIPRLADD 278
Cdd:pfam17148  84 LLPRSKNGLGlgSLDSDRSYIESIKAFPDNIEIRSVLTYTVPGGSSSG------PVTVEVNTSLVLLPEEP-MKPRLADP 156

                         170       180       190
                  ....*....|....*....|....*....|...
gi 515356404  279 RVGYFITAFQDFSKNNGKEPFVRYINRWHLEPS 311
Cdd:pfam17148 157 RVGYFTTSYTDFSDDQQKVETKRYITRWRLEPK 189
DUF5118 pfam17162
Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.
 65-112 1.58e-03

Domain of unknown function (DUF5118); This domain falls upstream of a met-zincin domain.


Pssm-ID: 435758  Cd Length: 50  Bit Score: 37.13  E-value: 1.58e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 515356404   65 YREAIKGTDKL-EGLFTIYRgeEDSKIYLELKPEQLNKNYLCTVTLESG 112
Cdd:pfam17162   4 YDKVIKKKAKTkKGLFTVHK--KDDKYYFEIPDSLLGRDMLVVTRIAKT 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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