|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
135-311 |
1.71e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 80.36 E-value: 1.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 135 QYLNFSHNALTDeLFQNCSTLRDLKLLILQKNKFESLSKVsfmTSLMKSLKYLDMSNNLLRHEGAGVQcqWAESLAELDL 214
Cdd:COG4886 116 ESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLPEP---LGNLTNLKSLDLSNNQLTDLPEELG--NLTNLKELDL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 215 SSNQLAD--AVFSCLPaNVRKLGLRNNHISSVPRGMVELSSLQELNLASNRLADLPACSGFASLQVLNVEMNSI--LTPS 290
Cdd:COG4886 190 SNNQITDlpEPLGNLT-NLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLtdLPPL 268
|
170 180
....*....|....*....|.
gi 514351400 291 ADFfqscPRVRELQAGHNPFK 311
Cdd:COG4886 269 ANL----TNLKTLDLSNNQLT 285
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
114-308 |
1.02e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.00 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 114 NLTIYD-------AYMPHMLCpNRTSSFQYLNFShNALTDELFQNCSTLRDLKLLILQKNKFESLSKVSFMTslMKSLKY 186
Cdd:PLN00113 357 NLTVLDlstnnltGEIPEGLC-SSGNLFKLILFS-NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTK--LPLVYF 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 187 LDMSNNLLrhEGAGVQCQW-AESLAELDLSSNQLadavFSCLP-----ANVRKLGLRNNHIS-SVPRGMVELSSLQELNL 259
Cdd:PLN00113 433 LDISNNNL--QGRINSRKWdMPSLQMLSLARNKF----FGGLPdsfgsKRLENLDLSRNQFSgAVPRKLGSLSELMQLKL 506
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 514351400 260 ASNRLA-----DLPACSGFASlqvLNVEMNSILTPSADFFQSCPRVRELQAGHN 308
Cdd:PLN00113 507 SENKLSgeipdELSSCKKLVS---LDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
137-310 |
6.41e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 46.70 E-value: 6.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 137 LNFSHNALTD-ELFQNCstlRDLKLLILQKNKFESLSKVSFMTSL------------------MKSLKYLDMSNNLLRH- 196
Cdd:cd21340 7 LYLNDKNITKiDNLSLC---KNLKVLYLYDNKITKIENLEFLTNLthlylqnnqiekienlenLVNLKKLYLGGNRISVv 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 197 EGagVQCQwaESLAELDLSSNQLAdavfsclpanvrklglRNNHISSVPRGMVELS-SLQELNLASNRLADLPACSGFAS 275
Cdd:cd21340 84 EG--LENL--TNLEELHIENQRLP----------------PGEKLTFDPRSLAALSnSLRVLNISGNNIDSLEPLAPLRN 143
|
170 180 190
....*....|....*....|....*....|....*..
gi 514351400 276 LQVLNVEMNSI--LTPSADFFQSCPRVRELQAGHNPF 310
Cdd:cd21340 144 LEQLDASNNQIsdLEELLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
158-219 |
3.25e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 3.25e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 514351400 158 LKLLILQKNKFESLSKVSFMTslMKSLKYLDMSNNLLRH--EGAGVQCqwaESLAELDLSSNQL 219
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKG--LSNLKVLDLSNNLLTTlsPGAFSGL---PSLRYLDLSGNRL 61
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
308-360 |
1.13e-04 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 39.34 E-value: 1.13e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 514351400 308 NPFKCSCELQAFIGLERraGGKLFGWPAAYVCEYPQGLRGtELKDFHLSQLAC 360
Cdd:smart00082 1 NPFICDCELRWLLRWLQ--ANEHLQDPVDLRCASPSSLRG-PLLELLHSEFKC 50
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
135-311 |
1.71e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 80.36 E-value: 1.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 135 QYLNFSHNALTDeLFQNCSTLRDLKLLILQKNKFESLSKVsfmTSLMKSLKYLDMSNNLLRHEGAGVQcqWAESLAELDL 214
Cdd:COG4886 116 ESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLTDLPEP---LGNLTNLKSLDLSNNQLTDLPEELG--NLTNLKELDL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 215 SSNQLAD--AVFSCLPaNVRKLGLRNNHISSVPRGMVELSSLQELNLASNRLADLPACSGFASLQVLNVEMNSI--LTPS 290
Cdd:COG4886 190 SNNQITDlpEPLGNLT-NLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEELDLSNNQLtdLPPL 268
|
170 180
....*....|....*....|.
gi 514351400 291 ADFfqscPRVRELQAGHNPFK 311
Cdd:COG4886 269 ANL----TNLKTLDLSNNQLT 285
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
110-311 |
3.83e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 51.86 E-value: 3.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 110 MNIANLTIYDAYMPHMLCPNRTSSFQYLNFSHNALTDELFQNCSTLRDLKLLILQKNKFESLSKVSFMTSLMKSLKYLDM 189
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 190 SNNLLrhEGAGVQCQWAESLAELDLSSNqlaDAVFSClpANVRKLGLRNNHISSVPRGMVELSSLQELNLASNRLADLPA 269
Cdd:COG4886 81 LLSLL--LLGLTDLGDLTNLTELDLSGN---EELSNL--TNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPE 153
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 514351400 270 -CSGFASLQVLNVEMNSILT-PSAdfFQSCPRVRELQAGHNPFK 311
Cdd:COG4886 154 pLGNLTNLKSLDLSNNQLTDlPEE--LGNLTNLKELDLSNNQIT 195
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
114-308 |
1.02e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 51.00 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 114 NLTIYD-------AYMPHMLCpNRTSSFQYLNFShNALTDELFQNCSTLRDLKLLILQKNKFESLSKVSFMTslMKSLKY 186
Cdd:PLN00113 357 NLTVLDlstnnltGEIPEGLC-SSGNLFKLILFS-NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTK--LPLVYF 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 187 LDMSNNLLrhEGAGVQCQW-AESLAELDLSSNQLadavFSCLP-----ANVRKLGLRNNHIS-SVPRGMVELSSLQELNL 259
Cdd:PLN00113 433 LDISNNNL--QGRINSRKWdMPSLQMLSLARNKF----FGGLPdsfgsKRLENLDLSRNQFSgAVPRKLGSLSELMQLKL 506
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 514351400 260 ASNRLA-----DLPACSGFASlqvLNVEMNSILTPSADFFQSCPRVRELQAGHN 308
Cdd:PLN00113 507 SENKLSgeipdELSSCKKLVS---LDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
137-310 |
6.41e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 46.70 E-value: 6.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 137 LNFSHNALTD-ELFQNCstlRDLKLLILQKNKFESLSKVSFMTSL------------------MKSLKYLDMSNNLLRH- 196
Cdd:cd21340 7 LYLNDKNITKiDNLSLC---KNLKVLYLYDNKITKIENLEFLTNLthlylqnnqiekienlenLVNLKKLYLGGNRISVv 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 197 EGagVQCQwaESLAELDLSSNQLAdavfsclpanvrklglRNNHISSVPRGMVELS-SLQELNLASNRLADLPACSGFAS 275
Cdd:cd21340 84 EG--LENL--TNLEELHIENQRLP----------------PGEKLTFDPRSLAALSnSLRVLNISGNNIDSLEPLAPLRN 143
|
170 180 190
....*....|....*....|....*....|....*..
gi 514351400 276 LQVLNVEMNSI--LTPSADFFQSCPRVRELQAGHNPF 310
Cdd:cd21340 144 LEQLDASNNQIsdLEELLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
135-288 |
8.93e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 47.62 E-value: 8.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 135 QYLNFSHNALTDeLFQNCSTLRDLKLLILQKNKFESLSKVsfmTSLMKSLKYLDMSNNLLRHEGAGVQCQwaeSLAELDL 214
Cdd:COG4886 185 KELDLSNNQITD-LPEPLGNLTNLEELDLSGNQLTDLPEP---LANLTNLETLDLSNNQLTDLPELGNLT---NLEELDL 257
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 514351400 215 SSNQLADAVFSCLPANVRKLGLRNNHISSvprgmVELSSLQELNLASNRLADLPACSGFASLQVLNVEMNSILT 288
Cdd:COG4886 258 SNNQLTDLPPLANLTNLKTLDLSNNQLTD-----LKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLL 326
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
158-219 |
3.25e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 3.25e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 514351400 158 LKLLILQKNKFESLSKVSFMTslMKSLKYLDMSNNLLRH--EGAGVQCqwaESLAELDLSSNQL 219
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKG--LSNLKVLDLSNNLLTTlsPGAFSGL---PSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
124-308 |
3.35e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 45.55 E-value: 3.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 124 HMLCPNRTSSFQYLNFSHNALTDE--------LFQNCStlrdLKLLILQKNKFESLSKVSF--MTSLMKSLKYLDMSNNL 193
Cdd:COG5238 172 SMAKALQNNSVETVYLGCNQIGDEgieelaeaLTQNTT----VTTLWLKRNPIGDEGAEILaeALKGNKSLTTLDLSNNQ 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 194 LRHEGAgvqCQWAESLAE------LDLSSNQL----ADAVFSCLPAN--VRKLGLRNNHISSvpRGMVEL-------SSL 254
Cdd:COG5238 248 IGDEGV---IALAEALKNnttvetLYLSGNQIgaegAIALAKALQGNttLTSLDLSVNRIGD--EGAIALaeglqgnKTL 322
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 514351400 255 QELNLASNRLADLPACSGFASLQV------LNVEMNSILTPSAD----FFQSCPRVRELQAGHN 308
Cdd:COG5238 323 HTLNLAYNGIGAQGAIALAKALQEnttlhsLDLSDNQIGDEGAIalakYLEGNTTLRELNLGKN 386
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
130-292 |
9.44e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 43.88 E-value: 9.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 130 RTSSFQYLNFSHNALTDE-LFQNCSTLRDLKL----LILQKNKFESLSkvsfMTSLMK------SLKYLDMSNNLLRHEG 198
Cdd:cd00116 106 RSSSLQELKLNNNGLGDRgLRLLAKGLKDLPPalekLVLGRNRLEGAS----CEALAKalranrDLKELNLANNGIGDAG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 199 AGVQCQ---WAESLAELDLSSNQLADAVFSCL------PANVRKLGLRNNHISSVprGMVEL--------SSLQELNLAS 261
Cdd:cd00116 182 IRALAEglkANCNLEVLDLNNNGLTDEGASALaetlasLKSLEVLNLGDNNLTDA--GAAALasallspnISLLTLSLSC 259
|
170 180 190
....*....|....*....|....*....|....*..
gi 514351400 262 NRLADLPA------CSGFASLQVLNVEMNSILTPSAD 292
Cdd:cd00116 260 NDITDDGAkdlaevLAEKESLLELDLRGNKFGEEGAQ 296
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
208-264 |
1.08e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 1.08e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 514351400 208 SLAELDLSSNQL---ADAVFSCLPaNVRKLGLRNNHISSV-PRGMVELSSLQELNLASNRL 264
Cdd:pfam13855 2 NLRSLDLSNNRLtslDDGAFKGLS-NLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
308-360 |
1.13e-04 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 39.34 E-value: 1.13e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 514351400 308 NPFKCSCELQAFIGLERraGGKLFGWPAAYVCEYPQGLRGtELKDFHLSQLAC 360
Cdd:smart00082 1 NPFICDCELRWLLRWLQ--ANEHLQDPVDLRCASPSSLRG-PLLELLHSEFKC 50
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
132-293 |
1.55e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 43.38 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 132 SSFQYLNFSHNALTDeLFQNCSTLRDLKLLILQKNKFESLSKVSFMTslmkSLKYLDMSNNLLRHEGAGVQCQwaeSLAE 211
Cdd:COG4886 205 TNLEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLTDLPELGNLT----NLEELDLSNNQLTDLPPLANLT---NLKT 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 212 LDLSSNQLADAVFSCLPA-NVRKLGLRNNHISSVPRGMVELSSLQELNLASNRLADLPACSGFASLQVLNVEMNSILTPS 290
Cdd:COG4886 277 LDLSNNQLTDLKLKELELlLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLL 356
|
...
gi 514351400 291 ADF 293
Cdd:COG4886 357 NLL 359
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
209-268 |
3.31e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 42.84 E-value: 3.31e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 209 LAELDLSSNQLADavFSCLPANVRKLGLRNNHISSVPrgmVELSSLQELNLASNRLADLP 268
Cdd:PRK15387 304 LQELSVSDNQLAS--LPALPSELCKLWAYNNQLTSLP---TLPSGLQELSVSDNQLASLP 358
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
182-301 |
6.20e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 41.70 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 182 KSLKYLDMSNNLLRHEGAGVQCQWAE---SLAELDLSSNQL----ADAVFSCLPAN--VRKLGLRNNHISSvpRGMVEL- 251
Cdd:COG5238 292 TTLTSLDLSVNRIGDEGAIALAEGLQgnkTLHTLNLAYNGIgaqgAIALAKALQENttLHSLDLSDNQIGD--EGAIALa 369
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 514351400 252 ------SSLQELNLASNRLADLPACSGFASLQV-----LNVEMNSILT-PSADFFQSCPRVR 301
Cdd:COG5238 370 kylegnTTLRELNLGKNNIGKQGAEALIDALQTnrlhtLILDGNLIGAeAQQRLEQLLERIK 431
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
209-286 |
7.16e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 41.69 E-value: 7.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 209 LAELDLSSNQLADavFSCLPANVRKLGLRNNHISSVP---RGMVEL--------------SSLQELNLASNRLADLPAC- 270
Cdd:PRK15387 344 LQELSVSDNQLAS--LPTLPSELYKLWAYNNRLTSLPalpSGLKELivsgnrltslpvlpSELKELMVSGNRLTSLPMLp 421
|
90
....*....|....*.
gi 514351400 271 SGFASLQVLNVEMNSI 286
Cdd:PRK15387 422 SGLLSLSVYRNQLTRL 437
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
253-293 |
1.24e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.45 E-value: 1.24e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 514351400 253 SLQELNLASNRLADLPACSGFASLQVLNVEMNSILTPSADF 293
Cdd:pfam12799 2 NLEVLDLSNNQITDIPPLAKLPNLETLDLSGNNKITDLSDL 42
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
137-310 |
1.56e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.60 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 137 LNFSHNALTDELFQNCSTLRDLKLLILQKNKFESLSKVSfMTSLMK-----------------------SLKYLDMSNNL 193
Cdd:PLN00113 289 LDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRlqvlqlwsnkfsgeipknlgkhnNLTVLDLSTNN 367
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 194 LRHEGAGVQCQwAESLAELDLSSNQLADAVFSCLPA--NVRKLGLRNNHIS-SVPRGMVELSSLQELNLASNRLA----- 265
Cdd:PLN00113 368 LTGEIPEGLCS-SGNLFKLILFSNSLEGEIPKSLGAcrSLRRVRLQDNSFSgELPSEFTKLPLVYFLDISNNNLQgrins 446
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170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 514351400 266 ---DLPacsgfaSLQVLNVEMNSILTPSADFFQScPRVRELQAGHNPF 310
Cdd:PLN00113 447 rkwDMP------SLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQF 487
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| LRR_8 |
pfam13855 |
Leucine rich repeat; |
135-194 |
2.13e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 2.13e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 514351400 135 QYLNFSHNALT---DELFQNcstLRDLKLLILQKNKFESLSKVSFmtSLMKSLKYLDMSNNLL 194
Cdd:pfam13855 4 RSLDLSNNRLTsldDGAFKG---LSNLKVLDLSNNLLTTLSPGAF--SGLPSLRYLDLSGNRL 61
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| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
136-284 |
2.18e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.22 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 136 YLNFSHNALTDELFQNCSTLRDLKLLILQKNKFESLSKVSFMTslmKSLKYLDMSNNLLrhegAGVQCQWAESLAE---L 212
Cdd:PLN00113 432 FLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS---KRLENLDLSRNQF----SGAVPRKLGSLSElmqL 504
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 514351400 213 DLSSNQLA----DAVFSClpANVRKLGLRNNHIS-SVPRGMVELSSLQELNLASNRLA-DLPACSG-FASLQVLNVEMN 284
Cdd:PLN00113 505 KLSENKLSgeipDELSSC--KKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGnVESLVQVNISHN 581
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
133-192 |
2.60e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 39.00 E-value: 2.60e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 514351400 133 SFQYLNFSHNALTDelFQNCSTLRDLKLLILQKNKFESLSKVSFMTSLMKSLKYLDMSNN 192
Cdd:cd21340 121 SLRVLNISGNNIDS--LEPLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
252-310 |
3.59e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 3.59e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 514351400 252 SSLQELNLASNRLADLP--ACSGFASLQVLNVEMNSILTPSADFFQSCPRVRELQAGHNPF 310
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDdgAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
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