NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|51247180]
View 

Chain I, Ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Ubiq-Cytc-red_N pfam09165
Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure ...
 2-77 1.10e-19

Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain.


:

Pssm-ID: 462698  Cd Length: 75  Bit Score: 74.70  E-value: 1.10e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 51247180    2 LSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATsESPVLDLKLSVLCRESLRGQAAGRPLVASVSLNVPASVR 77
Cdd:pfam09165  1 MSVAARSGNLAPYLKATAQAVANGLKPLVPAVVVKA-EKVLVPPKPKFLCRESLSGQLPTNGLAVSVGINVPAQVR 75
 
Name Accession Description Interval E-value
Ubiq-Cytc-red_N pfam09165
Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure ...
 2-77 1.10e-19

Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain.


Pssm-ID: 462698  Cd Length: 75  Bit Score: 74.70  E-value: 1.10e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 51247180    2 LSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATsESPVLDLKLSVLCRESLRGQAAGRPLVASVSLNVPASVR 77
Cdd:pfam09165  1 MSVAARSGNLAPYLKATAQAVANGLKPLVPAVVVKA-EKVLVPPKPKFLCRESLSGQLPTNGLAVSVGINVPAQVR 75
 
Name Accession Description Interval E-value
Ubiq-Cytc-red_N pfam09165
Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure ...
 2-77 1.10e-19

Ubiquinol-cytochrome c reductase 8 kDa, N-terminal; Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain.


Pssm-ID: 462698  Cd Length: 75  Bit Score: 74.70  E-value: 1.10e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 51247180    2 LSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATsESPVLDLKLSVLCRESLRGQAAGRPLVASVSLNVPASVR 77
Cdd:pfam09165  1 MSVAARSGNLAPYLKATAQAVANGLKPLVPAVVVKA-EKVLVPPKPKFLCRESLSGQLPTNGLAVSVGINVPAQVR 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH