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Conserved domains on  [gi|509083657|gb|AGN15905|]
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F0F1 ATP synthase subunit delta [Legionella pneumophila subsp. pneumophila str. Thunder Bay]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-180 9.13e-68

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 204.25  E-value: 9.13e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKfkkNDALNNLI 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSL---SEYVQNFL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  81 KLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGD 160
Cdd:PRK05758  78 KVLAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGD 157

                        170       180
                 ....*....|....*....|
gi 509083657 161 LVIDGSVRGKLNMLGTSLAA 180
Cdd:PRK05758 158 RVIDGSVRGKLERLKDALKS 177
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-180 9.13e-68

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 204.25  E-value: 9.13e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKfkkNDALNNLI 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSL---SEYVQNFL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  81 KLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGD 160
Cdd:PRK05758  78 KVLAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGD 157

                        170       180
                 ....*....|....*....|
gi 509083657 161 LVIDGSVRGKLNMLGTSLAA 180
Cdd:PRK05758 158 RVIDGSVRGKLERLKDALKS 177
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-180 2.98e-58

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 179.97  E-value: 2.98e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSdSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFkkNDALNNL 79
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEALFGGKL--SPETLNF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  80 IKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAG 159
Cdd:COG0712   78 LKLLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVG 157

                        170       180
                 ....*....|....*....|.
gi 509083657 160 DLVIDGSVRGKLNMLGTSLAA 180
Cdd:COG0712  158 DKVIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-178 2.65e-55

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 172.32  E-value: 2.65e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657    7 IARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFkkNDALNNLIKLLTT 85
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLELFKGLL--SPLTLNFLKLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   86 NKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSR-KVSLKISIDPSLLGGALIRAGDLVID 164
Cdd:pfam00213  79 NGRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 509083657  165 GSVRGKLNMLGTSL 178
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-178 4.82e-37

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 125.89  E-value: 4.82e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657    7 IARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFKKNDAlnNLIKLLTT 85
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNPLISAEKKKEFIKNVFGEQLDESSL--NLLLLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   86 NKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSR-KVSLKISIDPSLLGGALIRAGDLVID 164
Cdd:TIGR01145  79 NGRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVID 158

                         170
                  ....*....|....
gi 509083657  165 GSVRGKLNMLGTSL 178
Cdd:TIGR01145 159 GSVRGQLKRLSRQL 172
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-180 9.13e-68

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 204.25  E-value: 9.13e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKfkkNDALNNLI 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSL---SEYVQNFL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  81 KLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGD 160
Cdd:PRK05758  78 KVLAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGD 157

                        170       180
                 ....*....|....*....|
gi 509083657 161 LVIDGSVRGKLNMLGTSLAA 180
Cdd:PRK05758 158 RVIDGSVRGKLERLKDALKS 177
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-180 2.98e-58

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 179.97  E-value: 2.98e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSdSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFkkNDALNNL 79
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEALFGGKL--SPETLNF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  80 IKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAG 159
Cdd:COG0712   78 LKLLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVG 157

                        170       180
                 ....*....|....*....|.
gi 509083657 160 DLVIDGSVRGKLNMLGTSLAA 180
Cdd:COG0712  158 DKVIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-178 2.65e-55

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 172.32  E-value: 2.65e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657    7 IARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFkkNDALNNLIKLLTT 85
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLELFKGLL--SPLTLNFLKLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   86 NKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSR-KVSLKISIDPSLLGGALIRAGDLVID 164
Cdd:pfam00213  79 NGRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 509083657  165 GSVRGKLNMLGTSL 178
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 4-179 1.62e-37

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 127.24  E-value: 1.62e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   4 STTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGsKFKKNDALNNLIKL 82
Cdd:PRK13429   3 LNAIARRYAKALFQLAKEKGQLDSVYEELKQLAELLEDsPELRDALSNPVLSAEEKKAVLEKLLG-KLKVSPEVLNFLKL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  83 LTTNKRLMLLPEIEALY-EVYRaEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDL 161
Cdd:PRK13429  82 LADRRRLGILPEIAARYlELAD-EQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVELDTAVDPSLIGGVVVKIGDK 160

                        170
                 ....*....|....*...
gi 509083657 162 VIDGSVRGKLNMLGTSLA 179
Cdd:PRK13429 161 VLDASVRTQLRRLKETLK 178
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 7-178 4.82e-37

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 125.89  E-value: 4.82e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657    7 IARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFKKNDAlnNLIKLLTT 85
Cdd:TIGR01145   1 VARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNnKELKKFLSNPLISAEKKKEFIKNVFGEQLDESSL--NLLLLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   86 NKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSR-KVSLKISIDPSLLGGALIRAGDLVID 164
Cdd:TIGR01145  79 NGRLAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAaKVKLNCKVDKDLIGGVIIRIGDRVID 158

                         170
                  ....*....|....
gi 509083657  165 GSVRGKLNMLGTSL 178
Cdd:TIGR01145 159 GSVRGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 7-179 1.69e-19

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 80.80  E-value: 1.69e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   7 IARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVL-TPQATQFIANPASTDEQQIELLIEVCGSKFKKNDAlnNLIKLLTT 85
Cdd:CHL00119   8 IAQPYAEALLEFAKEKNIMEQITADIQLILTFLNeSPELKKFLANPLISKNAKKEVIKKTFGSQINENTL--KFLMVLVD 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  86 NKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLS-RKVSLKISIDPSLLGGALIRAGDLVID 164
Cdd:CHL00119  86 RGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNaKEIKLVITVDPSLIGGFLIKIGSKVID 165

                        170
                 ....*....|....*....
gi 509083657 165 GSVRGKL----NMLGTSLA 179
Cdd:CHL00119 166 TSIKGQLkqlaSHLDTVLE 184
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 5-172 3.40e-17

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 74.79  E-value: 3.40e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   5 TTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVltPQATQFIANPASTDEQQIELLIEVCGS-KFKKNDALNNLIKLL 83
Cdd:PRK13441   4 SAIASKYARALLNVAIELEKEEEYGEFLDLVCQIY--ESAKEFFDNPIVKPEKKVSLIKEIMKEfGQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  84 TTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVI 163
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEETIDESLIAGAVVEFEGKRL 161


                 ....*....
gi 509083657 164 DGSVRGKLN 172
Cdd:PRK13441 162 DVTVQGRLK 170
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 14-180 1.55e-16

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 74.98  E-value: 1.55e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  14 AIFEHALAEKKLSEWSEYLTLLAQVVLT-PQATQFIANPASTDEQQIELLIEVCGSKFkkNDALNNLIKLLTTNKR-LML 91
Cdd:PRK13430 106 ALLASAEAQGALDDVEDELFRLGRILASnPELRLALSDRAAPAEAKRELLARLLYGKV--TPVTERLAEQAVGRPRgRSI 183

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  92 LPEIEAL-YEVyrAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGK 170
Cdd:PRK13430 184 EEGLDELsNLA--AARRGRSVATVTTAVPLSDEQKQRLAAALSRIYGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGR 261

                        170
                 ....*....|
gi 509083657 171 LNMLGTSLAA 180
Cdd:PRK13430 262 LERLRRRLAG 271
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 7-148 1.15e-15

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 70.78  E-value: 1.15e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   7 IARPYAKAIFEhALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGskfKKNDALNNLIKLLTTN 86
Cdd:PRK08474   5 IAKRYAKALLS-SLSSDELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVD---NANAKFQNFIKLLAEN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 509083657  87 KRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDP 148
Cdd:PRK08474  81 KRLELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLKQKKSD 142
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 1-171 6.94e-14

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 66.11  E-value: 6.94e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657   1 MSDSTtIARPYAKAIFEhalAEKKLSEWSEYLTLLAQVVLTPQATQ-FIANPASTDEQQIELLIEvcGSKFKKNDALNNL 79
Cdd:PRK13434   1 MNDSG-VSKVYASALLG---AANSPEEVEQELGDLVQLLFKDEKIRnFFLSPTVSPEEKEQTLAK--NLRGKISDITLNF 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  80 IKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAG 159
Cdd:PRK13434  75 LGVLLNKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFILEVSEDKNLLGGFVVQFN 154

                        170
                 ....*....|..
gi 509083657 160 DLVIDGSVRGKL 171
Cdd:PRK13434 155 DLKIEKSIASQL 166
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 11-178 6.38e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 60.83  E-value: 6.38e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  11 YAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQ-IELLIEVCGSKFKKNdaLNNLIKLLTTNKRL 89
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYFIDKEEkFKIIDKIFSAKIDIY--LVNFLKILAKNNLF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  90 MLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRG 169
Cdd:PRK13436  89 IYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSIKS 168


                 ....*....
gi 509083657 170 KLNMLGTSL 178
Cdd:PRK13436 169 KLKELKKQV 177
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 42-171 1.56e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 61.67  E-value: 1.56e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 509083657  42 PQATQFIANPASTDEQQIELLIEVCGSKFKKNDALNNLikLLTTNKRLMLLPEIEA---LYEVYRAEQEKILEVdVVSYS 118
Cdd:PRK13428 307 PRLAILLSDYTVPADGRVALLRKVLGGASTVNPVTVAL--LSQTVELLRGQPAEEAvlfLAELAVARRGEVVAQ-VSAAA 383

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 509083657 119 ELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGKL 171
Cdd:PRK13428 384 ELSDAQRTRLTEVLSRIYGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSRL 436
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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