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Conserved domains on  [gi|506372089|ref|WP_015891808|]
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HK97 gp10 family phage protein [Brevibacillus brevis]

Protein Classification

HK97 gp10 family phage protein( domain architecture ID 10522339)

HK97 gp10 family phage protein similar to Bacillus subtilis phage-like element PBSX protein XkdI

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-93 7.82e-11

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


:

Pssm-ID: 428172  Cd Length: 80  Bit Score: 55.03  E-value: 7.82e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506372089   10 ERMYKRLKKHHKrEVQVSMDRVARMAGMQVLRGAQDRVPVRD-GILRASLIIGNrkniFDLVLGGLRAEITVGTNLSYAR 88
Cdd:pfam04883   1 DKLIKKLEKLSK-VAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKVGV----NLVKEKGGELVVEVGSNAEYAH 75


                  ....*
gi 506372089   89 YVEEG 93
Cdd:pfam04883  76 LVEFG 80
 
Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-93 7.82e-11

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 55.03  E-value: 7.82e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506372089   10 ERMYKRLKKHHKrEVQVSMDRVARMAGMQVLRGAQDRVPVRD-GILRASLIIGNrkniFDLVLGGLRAEITVGTNLSYAR 88
Cdd:pfam04883   1 DKLIKKLEKLSK-VAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKVGV----NLVKEKGGELVVEVGSNAEYAH 75


                  ....*
gi 506372089   89 YVEEG 93
Cdd:pfam04883  76 LVEFG 80
 
Name Accession Description Interval E-value
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 10-93 7.82e-11

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 55.03  E-value: 7.82e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506372089   10 ERMYKRLKKHHKrEVQVSMDRVARMAGMQVLRGAQDRVPVRD-GILRASLIIGNrkniFDLVLGGLRAEITVGTNLSYAR 88
Cdd:pfam04883   1 DKLIKKLEKLSK-VAEKAAKKALKAAAAEVADEAKKNAPVDTtGKLRDSIKVGV----NLVKEKGGELVVEVGSNAEYAH 75


                  ....*
gi 506372089   89 YVEEG 93
Cdd:pfam04883  76 LVEFG 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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