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Conserved domains on  [gi|504454840|ref|WP_014641942|]
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YkvS family protein [Halobacillus halophilus]

Protein Classification

YkvS family protein( domain architecture ID 10561674)

YkvS family protein is a DUF2187 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2187 pfam09953
Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various ...
 32-89 6.85e-23

Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various hypothetical bacterial proteins, has no known function.


:

Pssm-ID: 401795  Cd Length: 60  Bit Score: 83.27  E-value: 6.85e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 504454840  32 ATEGDIITFQKDGQQMEAVVTSARlQNSVVCDMTIMDDFHERNLEFEKTVVAHKNYSI 89
Cdd:pfam09953  3 AKVGDIIEFKRGDLTLTGIVEKVN-ENSVIVDLTIMDNFDELDLEFERTVVNHKNYKI 59
 
Name Accession Description Interval E-value
DUF2187 pfam09953
Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various ...
 32-89 6.85e-23

Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 401795  Cd Length: 60  Bit Score: 83.27  E-value: 6.85e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 504454840  32 ATEGDIITFQKDGQQMEAVVTSARlQNSVVCDMTIMDDFHERNLEFEKTVVAHKNYSI 89
Cdd:pfam09953  3 AKVGDIIEFKRGDLTLTGIVEKVN-ENSVIVDLTIMDNFDELDLEFERTVVNHKNYKI 59
YkvS COG4873
Uncharacterized conserved protein YkvS, DUF2187 family [Function unknown];
32-95 1.78e-21

Uncharacterized conserved protein YkvS, DUF2187 family [Function unknown];


Pssm-ID: 443901  Cd Length: 68  Bit Score: 79.68  E-value: 1.78e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504454840 32 ATEGDIITFQKDgqqMEAVVTSaRLQNSVVCDMTIMDDFHERNLEFEKTVVAHKNYSIKERRDR 95
Cdd:COG4873   9 AEVGDIIEFKDG---LKGKVEK-VNENSVIVDLTIMENFDERDLEYEKTVVNHKNYKIIERADQ 68
 
Name Accession Description Interval E-value
DUF2187 pfam09953
Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various ...
 32-89 6.85e-23

Uncharacterized protein conserved in bacteria (DUF2187); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 401795  Cd Length: 60  Bit Score: 83.27  E-value: 6.85e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 504454840  32 ATEGDIITFQKDGQQMEAVVTSARlQNSVVCDMTIMDDFHERNLEFEKTVVAHKNYSI 89
Cdd:pfam09953  3 AKVGDIIEFKRGDLTLTGIVEKVN-ENSVIVDLTIMDNFDELDLEFERTVVNHKNYKI 59
YkvS COG4873
Uncharacterized conserved protein YkvS, DUF2187 family [Function unknown];
32-95 1.78e-21

Uncharacterized conserved protein YkvS, DUF2187 family [Function unknown];


Pssm-ID: 443901  Cd Length: 68  Bit Score: 79.68  E-value: 1.78e-21
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504454840 32 ATEGDIITFQKDgqqMEAVVTSaRLQNSVVCDMTIMDDFHERNLEFEKTVVAHKNYSIKERRDR 95
Cdd:COG4873   9 AEVGDIIEFKDG---LKGKVEK-VNENSVIVDLTIMENFDERDLEYEKTVVNHKNYKIIERADQ 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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