|
Name |
Accession |
Description |
Interval |
E-value |
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
29-1010 |
0e+00 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 1296.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:COG3696 27 GIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRSISRFGLSVVTVIFEDGTDIYWA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSDVFMFTVDGDA---SLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVRA 185
Cdd:COG3696 107 RQLVLERLQQVREQLPAGVTPELGPISTGLGEIYQYTLESDPgkySLMELRTLQDWVIRPQLRSVPGVAEVNSFGGFVKQ 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 186 FAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVRE 265
Cdd:COG3696 187 YQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRGIGLIRSLEDIENIVVKTRNGTPVLLRDVAEVRI 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 266 EALTRYGVVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLEAIV 345
Cdd:COG3696 267 GPAPRRGAATLNGEGEVVGGIVLMLKGENALEVIEAVKAKLAELKPSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGAL 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 346 LVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHDPGRPLD 425
Cdd:COG3696 347 LVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLGGLAIDFGIIVDGAVVMVENILRRLEENRAAGTP 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 426 QDRavgqrLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLLRQ 505
Cdd:COG3696 427 RER-----LEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLFRPMALTVIFALLGALLLSLTLVPVLASLLLRG 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 506 GPAE-DPWLVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLPSISLGSAAAL 584
Cdd:COG3696 502 KVPEkENPLVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPRLGSEFLPELDEGDLLVMATLPPGISLEESVEL 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 585 DLQVEKALLDgVPEIRSVIARSGADELGLDPMGLNETDMFTVLKPSKEWRG--DKESVIAAMRRVLDGFPGLDYSITQPI 662
Cdd:COG3696 582 GQQVERILKS-FPEVESVVSRTGRAEDATDPMGVNMSETFVILKPRSEWRSgrTKEELIAEMREALEQIPGVNFNFSQPI 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 663 EMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGRAGFDASTLEGD 742
Cdd:COG3696 661 QMRVDELLSGVRADVAVKIFGDDLDVLRRLAEQIEAVLKTVPGAADVQVERVTGLPQLDIRIDRDAAARYGLNVADVQDV 740
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 743 LRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAHENGSRFAAVQA 822
Cdd:COG3696 741 VETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPNQISRENGRRRIVVQA 820
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 823 NVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQSALIFINIPF 902
Cdd:COG3696 821 NVRGRDLGSFVAEAQAKVAEQVKLPPGYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPF 900
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 903 ALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGLIP 982
Cdd:COG3696 901 ALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYINQLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLP 980
|
970 980
....*....|....*....|....*...
gi 503768167 983 LLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:COG3696 981 MALSTGPGSEVQRPLATVVIGGLITSTL 1008
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
29-1010 |
0e+00 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 853.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:TIGR00914 27 GIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRYGLSQVTVIFKDGTDLYFA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSDVFMFTV---------DGDAS-LAAKRDALQWIIRPQLRTLPGVADVNM 178
Cdd:TIGR00914 107 RQLVNERLQQARDNLPEGVSPEMGPISTGLGEIFLYTVeaeegarkkDGGAYtLTDLRTIQDWIIRPQLRTVPGVAEVNS 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 179 LGGDVRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVR 258
Cdd:TIGR00914 187 IGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPGQVQSMDDIRNIVIATGEGVPIRIR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 259 DLAEVREEALTRYGVVTQDGRhEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSH 338
Cdd:TIGR00914 267 DVARVQIGKELRTGAATENGK-EVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPEGVEIVTTYDRSQLVDAAIATVKK 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 339 ALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGglAIALGMLVDAAVVVVENLVHHLA- 417
Cdd:TIGR00914 346 NLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLG--ALDFGLIVDGAVVIVENAHRRLAe 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 418 --HDPGRPLDQDravgQRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLV 495
Cdd:TIGR00914 424 aqHHHGRQLTLK----ERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPMAFTVVLALAGAMILSLTFV 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 496 PVLASLLLRQGPAE-DPWLVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLP 574
Cdd:TIGR00914 500 PAAVALFIRGKVAEkENRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGGEFIPSLNEGDLAYQALRIP 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 575 SISLGSAAALDLQVEKALLDgVPEIRSVIARSGADELGLDPMGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDG---F 651
Cdd:TIGR00914 580 GTSLAQSVAMQQTLEKLIKS-FPEVARVFAKTGTAEIATDPMPPNASDTYIILKPESQWPEGKKTKEDLIEEIQEAtvrI 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 652 PGLDYSITQPIEMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGR 731
Cdd:TIGR00914 659 PGNNYEFTQPIQMRFNELISGVRSDVAVKVFGDDLDDLDATAEKISAVLKGVPGAADVKVEQTTGLPYLTVEIDREKAAR 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 732 AGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRV-----DNGQGVSYPLQNLAHLRAIQGP 806
Cdd:TIGR00914 739 YGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIplplsEDARKQFIPLSDVADLRVSPGP 818
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 807 VQVAHENGSRFAAVQANVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTT 886
Cdd:TIGR00914 819 NQISRENGKRRVVVSANVRGRDLGSFVDDAKKAIAEQVKLPPGYWITWGGQFEQLQSATKRLQIVVPVTLLLIFVLLYAA 898
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 887 FGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRL 966
Cdd:TIGR00914 899 FGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRV 978
|
970 980 990 1000
....*....|....*....|....*....|....*....|....
gi 503768167 967 RPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:TIGR00914 979 RPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATL 1022
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
29-1010 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 832.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:pfam00873 23 GILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSSQSSYGLSSITLTFELGTDIDIA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAG-TQGGLAPIATPLSDVFMFTV---DGDASLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVR 184
Cdd:pfam00873 103 RQDVQNRLQLATPLLPEGvQRPGISVIKTSLGPIMVLAVtspDGSYTQTDLRDYADTNIKPQLSRVPGVGDVQLFGGSEY 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 185 AFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVR 264
Cdd:pfam00873 183 AMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAEDFEKIIVKNQDGSPVRLRDVATVE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 265 EEALTRYGVVTQDGRhEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLEAI 344
Cdd:pfam00873 263 LGSELYRGFATFNGK-PAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQGVEIVVVYDTTPFIRASIEEVVKTLLEAI 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 345 VLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHDPGRPL 424
Cdd:pfam00873 342 VLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVVDDAIVVVENIERVLEENGLKPL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 425 DQdravgqrldrILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLLR 504
Cdd:pfam00873 422 EA----------AYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVALTLTPALCATLLK 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 505 QGPAEDPW--------LVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLPSI 576
Cdd:pfam00873 492 PRREPKHGgffrwfnrMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEGVFVTSAQLPPGV 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 577 SLGSAAALDLQVEKALLDgVPEIRSVIARSGADELGlDPMGLNETDMFTVLKPSKEWRGDKESV---IAAMRRVLDGFPG 653
Cdd:pfam00873 572 SLDQTQRVMKQVEKILKE-KPEVESVFAVTGFAFSG-DNNGPNSGDAFISLKPWKERPGPEKSVqalIERLRKALKQIPG 649
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 654 LDYSITQPIEMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGRAG 733
Cdd:pfam00873 650 ANVFLFQPIQLRGLGTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLPGLSDVRSDGQEDQPQLQVNIDREKAARLG 729
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 734 FDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAHEN 813
Cdd:pfam00873 730 VSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWGYGPPSINRYN 809
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 814 GSRFAAVQANVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQS 893
Cdd:pfam00873 810 GFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVLAALYESWSDP 889
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 894 ALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLER-GLPLVEAVRTGAQRRLRPVMMT 972
Cdd:pfam00873 890 LSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQeGKSLEEAILEACRLRLRPILMT 969
|
970 980 990
....*....|....*....|....*....|....*...
gi 503768167 973 ASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:pfam00873 970 ALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTV 1007
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
29-1026 |
2.33e-130 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 420.58 E-value: 2.33e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:NF033617 22 GLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSLGYSTITLQFRLGTDLDVA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAG-----TQGGLAPIATPlsdVFMFTVDGDA-SLAAKRDALQWIIRPQLRTLPGVADVNMLGGD 182
Cdd:NF033617 102 LSEVQAAINAAQSLLPSEapdppVYRKANSADTP---IMYIGLTSEEmPRGQLTDYAERVLAPKLSQINGVGSVDVSGGQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 183 VRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEeGELTRI-VRVQGAFRNGDDIANTVVAQRAGQT-LRVRDL 260
Cdd:NF033617 179 RPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVR-GDSVVStVRANDQLKTAEDYEDLVIKYADNGApVRLGDV 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 261 AEVREEALTRYGVVTQDGrHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHAL 340
Cdd:NF033617 258 ATVELGAENVRNRAWANG-VPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLYDRTRFIRASIDEVESTL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 341 LEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLahDP 420
Cdd:NF033617 337 LEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLAIGLVVDDAIVVVENIHRHI--EE 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 421 GRPldqdravgqRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLAS 500
Cdd:NF033617 415 GES---------PLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVALTLTPMMCS 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 501 LLLRQGPAEDPWLVR------RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLP 574
Cdd:NF033617 486 RLLKANEKPGRFARAvdrffdGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELAPSEDRGVIFGMIQAPQ 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 575 SISLGSAAALDLQVEKALLDgVPEIRSVIARSGadelGLDPMGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGFPGL 654
Cdd:NF033617 566 SISLDYMSAKMRDVEKILSS-DPEVQSLTSFNG----VGGNPGDNTGFGIINLKPWDERDVSAQEIIDRLRPKLAKVPGM 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 655 DysitqPIEMRVAEMLTGSRGDLVVKIY---GPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGR 731
Cdd:NF033617 641 D-----LFLFPLQDLPGGAGSSLPQYQVtltPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPELNVDIDRDKAAR 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 732 AGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAH 811
Cdd:NF033617 716 LGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNH 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 812 ENGSRFAAVQAN----VSGRDLVGFVDDARRAVakavpLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTF 887
Cdd:NF033617 796 FNQFNSATLSFNlapgVSLGEAIEALDQAAKEL-----LPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYLVLAIQY 870
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 888 GSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNEL-LERGLPLVEAVRTGAQRRL 966
Cdd:NF033617 871 ESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELqRHQGLSRREAIYQAAALRL 950
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 967 RPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTaltlillplLFTRFGLP 1026
Cdd:NF033617 951 RPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGT---------LFTLFVLP 1001
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
29-1008 |
3.32e-73 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 262.74 E-value: 3.32e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:PRK10614 25 GILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILQFDFDRDINGA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSD--VFMFTVDGDA-SLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVRA 185
Cdd:PRK10614 105 ARDVQAAINAAQSLLPSGMPSRPTYRKANPSDapIMILTLTSDTySQGQLYDFASTQLAQTISQIDGVGDVDVGGSSLPA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 186 FAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVRE 265
Cdd:PRK10614 185 VRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGAAVRLGDVATVTD 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 266 EaltrygvvTQDGRHEAVEG-------IVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSH 338
Cdd:PRK10614 265 S--------VQDVRNAGMTNakpaillMIRKLPEANIIQTVDRIRAKLPELRETIPAAIDLQIAQDRSPTIRASLEEVEQ 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 339 ALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLah 418
Cdd:PRK10614 337 TLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHL-- 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 419 dpgrpldqdRAVGQRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVL 498
Cdd:PRK10614 415 ---------EAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGISLLVSLTLTPMM 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 499 ASLLLRQGPAEDPWLVRRLSHIYTGV-------LDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQ 571
Cdd:PRK10614 486 CAWLLKSSKPREQKRLRGFGRMLVALqqgygrsLKWVLNHTRWVGVVLLGTIALNVWLYISIPKTFFPEQDTGRLMGFIQ 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 572 TLPSISLgSAAALDLQVEKALLDGVPEIRSVIARSGADElgldpmgLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGF 651
Cdd:PRK10614 566 ADQSISF-QAMRGKLQDFMKIIRDDPAVDNVTGFTGGSR-------VNSGMMFITLKPLSERSETAQQVIDRLRVKLAKE 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 652 PGLDYSItqpieMRVAEMLTGSRGDLVVKIY---GPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLA 728
Cdd:PRK10614 638 PGANLFL-----MAVQDIRVGGRQSNASYQYtllSDDLAALREWEPKIRKALAALPELADVNSDQQDKGAEMALTYDRDT 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 729 MGRAGFDAStlegDLRALLE---GQPQ-GTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQ 804
Cdd:PRK10614 713 MARLGIDVQ----AANSLLNnafGQRQiSTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPAN 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 805 GPVQVAHENGSRFAAVQANV-SGRDLVGFVDDARRAVAkAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVIL 883
Cdd:PRK10614 789 APLSVNHQGLSAASTISFNLpTGKSLSDASAAIERAMT-QLGVPSTVRGSFAGTAQVFQETMNSQLILILAAIATVYIVL 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 884 LTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVShFNELLER--GLPLVEAVRTG 961
Cdd:PRK10614 868 GILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVD-FALEAQRngNLTAQEAIFQA 946
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*..
gi 503768167 962 AQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSS 1008
Cdd:PRK10614 947 CLLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMS 993
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
29-1010 |
0e+00 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 1296.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:COG3696 27 GIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRSISRFGLSVVTVIFEDGTDIYWA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSDVFMFTVDGDA---SLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVRA 185
Cdd:COG3696 107 RQLVLERLQQVREQLPAGVTPELGPISTGLGEIYQYTLESDPgkySLMELRTLQDWVIRPQLRSVPGVAEVNSFGGFVKQ 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 186 FAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVRE 265
Cdd:COG3696 187 YQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRGIGLIRSLEDIENIVVKTRNGTPVLLRDVAEVRI 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 266 EALTRYGVVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLEAIV 345
Cdd:COG3696 267 GPAPRRGAATLNGEGEVVGGIVLMLKGENALEVIEAVKAKLAELKPSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGAL 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 346 LVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHDPGRPLD 425
Cdd:COG3696 347 LVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLGGLAIDFGIIVDGAVVMVENILRRLEENRAAGTP 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 426 QDRavgqrLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLLRQ 505
Cdd:COG3696 427 RER-----LEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLFRPMALTVIFALLGALLLSLTLVPVLASLLLRG 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 506 GPAE-DPWLVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLPSISLGSAAAL 584
Cdd:COG3696 502 KVPEkENPLVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPRLGSEFLPELDEGDLLVMATLPPGISLEESVEL 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 585 DLQVEKALLDgVPEIRSVIARSGADELGLDPMGLNETDMFTVLKPSKEWRG--DKESVIAAMRRVLDGFPGLDYSITQPI 662
Cdd:COG3696 582 GQQVERILKS-FPEVESVVSRTGRAEDATDPMGVNMSETFVILKPRSEWRSgrTKEELIAEMREALEQIPGVNFNFSQPI 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 663 EMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGRAGFDASTLEGD 742
Cdd:COG3696 661 QMRVDELLSGVRADVAVKIFGDDLDVLRRLAEQIEAVLKTVPGAADVQVERVTGLPQLDIRIDRDAAARYGLNVADVQDV 740
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 743 LRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAHENGSRFAAVQA 822
Cdd:COG3696 741 VETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPNQISRENGRRRIVVQA 820
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 823 NVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQSALIFINIPF 902
Cdd:COG3696 821 NVRGRDLGSFVAEAQAKVAEQVKLPPGYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPF 900
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 903 ALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGLIP 982
Cdd:COG3696 901 ALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYINQLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLP 980
|
970 980
....*....|....*....|....*...
gi 503768167 983 LLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:COG3696 981 MALSTGPGSEVQRPLATVVIGGLITSTL 1008
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
29-1010 |
0e+00 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 853.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:TIGR00914 27 GIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRYGLSQVTVIFKDGTDLYFA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSDVFMFTV---------DGDAS-LAAKRDALQWIIRPQLRTLPGVADVNM 178
Cdd:TIGR00914 107 RQLVNERLQQARDNLPEGVSPEMGPISTGLGEIFLYTVeaeegarkkDGGAYtLTDLRTIQDWIIRPQLRTVPGVAEVNS 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 179 LGGDVRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVR 258
Cdd:TIGR00914 187 IGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPGQVQSMDDIRNIVIATGEGVPIRIR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 259 DLAEVREEALTRYGVVTQDGRhEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSH 338
Cdd:TIGR00914 267 DVARVQIGKELRTGAATENGK-EVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPEGVEIVTTYDRSQLVDAAIATVKK 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 339 ALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGglAIALGMLVDAAVVVVENLVHHLA- 417
Cdd:TIGR00914 346 NLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLG--ALDFGLIVDGAVVIVENAHRRLAe 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 418 --HDPGRPLDQDravgQRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLV 495
Cdd:TIGR00914 424 aqHHHGRQLTLK----ERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPMAFTVVLALAGAMILSLTFV 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 496 PVLASLLLRQGPAE-DPWLVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLP 574
Cdd:TIGR00914 500 PAAVALFIRGKVAEkENRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGGEFIPSLNEGDLAYQALRIP 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 575 SISLGSAAALDLQVEKALLDgVPEIRSVIARSGADELGLDPMGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDG---F 651
Cdd:TIGR00914 580 GTSLAQSVAMQQTLEKLIKS-FPEVARVFAKTGTAEIATDPMPPNASDTYIILKPESQWPEGKKTKEDLIEEIQEAtvrI 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 652 PGLDYSITQPIEMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGR 731
Cdd:TIGR00914 659 PGNNYEFTQPIQMRFNELISGVRSDVAVKVFGDDLDDLDATAEKISAVLKGVPGAADVKVEQTTGLPYLTVEIDREKAAR 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 732 AGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRV-----DNGQGVSYPLQNLAHLRAIQGP 806
Cdd:TIGR00914 739 YGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIplplsEDARKQFIPLSDVADLRVSPGP 818
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 807 VQVAHENGSRFAAVQANVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTT 886
Cdd:TIGR00914 819 NQISRENGKRRVVVSANVRGRDLGSFVDDAKKAIAEQVKLPPGYWITWGGQFEQLQSATKRLQIVVPVTLLLIFVLLYAA 898
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 887 FGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRL 966
Cdd:TIGR00914 899 FGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRV 978
|
970 980 990 1000
....*....|....*....|....*....|....*....|....
gi 503768167 967 RPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:TIGR00914 979 RPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATL 1022
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
29-1010 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 832.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:pfam00873 23 GILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSSQSSYGLSSITLTFELGTDIDIA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAG-TQGGLAPIATPLSDVFMFTV---DGDASLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVR 184
Cdd:pfam00873 103 RQDVQNRLQLATPLLPEGvQRPGISVIKTSLGPIMVLAVtspDGSYTQTDLRDYADTNIKPQLSRVPGVGDVQLFGGSEY 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 185 AFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVR 264
Cdd:pfam00873 183 AMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAEDFEKIIVKNQDGSPVRLRDVATVE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 265 EEALTRYGVVTQDGRhEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLEAI 344
Cdd:pfam00873 263 LGSELYRGFATFNGK-PAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQGVEIVVVYDTTPFIRASIEEVVKTLLEAI 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 345 VLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHDPGRPL 424
Cdd:pfam00873 342 VLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVVDDAIVVVENIERVLEENGLKPL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 425 DQdravgqrldrILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLLR 504
Cdd:pfam00873 422 EA----------AYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVALTLTPALCATLLK 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 505 QGPAEDPW--------LVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLPSI 576
Cdd:pfam00873 492 PRREPKHGgffrwfnrMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEGVFVTSAQLPPGV 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 577 SLGSAAALDLQVEKALLDgVPEIRSVIARSGADELGlDPMGLNETDMFTVLKPSKEWRGDKESV---IAAMRRVLDGFPG 653
Cdd:pfam00873 572 SLDQTQRVMKQVEKILKE-KPEVESVFAVTGFAFSG-DNNGPNSGDAFISLKPWKERPGPEKSVqalIERLRKALKQIPG 649
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 654 LDYSITQPIEMRVAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGRAG 733
Cdd:pfam00873 650 ANVFLFQPIQLRGLGTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLPGLSDVRSDGQEDQPQLQVNIDREKAARLG 729
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 734 FDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAHEN 813
Cdd:pfam00873 730 VSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWGYGPPSINRYN 809
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 814 GSRFAAVQANVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQS 893
Cdd:pfam00873 810 GFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVLAALYESWSDP 889
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 894 ALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLER-GLPLVEAVRTGAQRRLRPVMMT 972
Cdd:pfam00873 890 LSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQeGKSLEEAILEACRLRLRPILMT 969
|
970 980 990
....*....|....*....|....*....|....*...
gi 503768167 973 ASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:pfam00873 970 ALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTV 1007
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
29-1009 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 740.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:COG0841 25 GLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYITSTSSEGSSSITVEFELGTDIDEA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQgglAPIATPLSD----VFMFTVDGD-ASLAAKRDALQWIIRPQLRTLPGVADVNMLGGDV 183
Cdd:COG0841 105 LVDVQNAVDRARSDLPEDVE---PPGVTKVNPsdfpVMVLALSSDdLDELELSDYAERNIKDRLERVPGVGQVQIFGGRE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 184 RAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEV 263
Cdd:COG0841 182 REIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEEFENIVIRTNDGSVVRLGDVARV 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 264 REEALTRYGVVTQDGrHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLEA 343
Cdd:COG0841 262 EDGAEDYRSIARLNG-KPAVGLAIQKQPGANALEVADAVRAKLEELQASLPEGVELTIVYDQSEFIRASIEEVVKTLLEA 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 344 IVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHdpGRP 423
Cdd:COG0841 341 ILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALVLAIGIVVDDAIVVVENIERHMEE--GLS 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 424 ldqdravgqRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLL 503
Cdd:COG0841 419 ---------PLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALLISLFVALTLTPALCARLL 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 504 RQGPAEDPWLVR--------RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLPS 575
Cdd:COG0841 490 KPHPKGKKGRFFrafnrgfdRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLPTEFFPEEDQGQIIVSVQLPPG 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 576 ISLGSAAALDLQVEKALLDgVPEIRSVIARSGadeLGLDPMGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGFPGLD 655
Cdd:COG0841 570 TSLERTEAVVRQVEEILLE-VPEVESVFSVVG---FSGGGSGSNSGTIFVTLKPWDERDRSADEIIARLREKLAKIPGAR 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 656 YSITQPiemrvAEMLTGSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGRAGFD 735
Cdd:COG0841 646 VFVFQP-----PAGGLGSGAPIEVQLQGDDLEELAAAAEKLLAALRQIPGLVDVRSDLQLGKPELQLDIDREKAAALGVT 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 736 ASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAHENGS 815
Cdd:COG0841 721 VADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVATIEEGTGPSSINRYNGQ 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 816 RFAAVQANV-SGRDLVGFVDDARRAVAKAVpLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQSA 894
Cdd:COG0841 801 RSVTVSANLaPGVSLGEALAAIEELAAELK-LPPGVSIEFTGQAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFIQPL 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 895 LIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTAS 974
Cdd:COG0841 880 IILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLREEGMSLREAILEAARLRLRPILMTSL 959
|
970 980 990
....*....|....*....|....*....|....*
gi 503768167 975 ITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSST 1009
Cdd:COG0841 960 ATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFST 994
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
29-1026 |
2.33e-130 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 420.58 E-value: 2.33e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:NF033617 22 GLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSLGYSTITLQFRLGTDLDVA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAG-----TQGGLAPIATPlsdVFMFTVDGDA-SLAAKRDALQWIIRPQLRTLPGVADVNMLGGD 182
Cdd:NF033617 102 LSEVQAAINAAQSLLPSEapdppVYRKANSADTP---IMYIGLTSEEmPRGQLTDYAERVLAPKLSQINGVGSVDVSGGQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 183 VRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEeGELTRI-VRVQGAFRNGDDIANTVVAQRAGQT-LRVRDL 260
Cdd:NF033617 179 RPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVR-GDSVVStVRANDQLKTAEDYEDLVIKYADNGApVRLGDV 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 261 AEVREEALTRYGVVTQDGrHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHAL 340
Cdd:NF033617 258 ATVELGAENVRNRAWANG-VPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLYDRTRFIRASIDEVESTL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 341 LEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLahDP 420
Cdd:NF033617 337 LEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLAIGLVVDDAIVVVENIHRHI--EE 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 421 GRPldqdravgqRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLAS 500
Cdd:NF033617 415 GES---------PLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVALTLTPMMCS 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 501 LLLRQGPAEDPWLVR------RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTLP 574
Cdd:NF033617 486 RLLKANEKPGRFARAvdrffdGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELAPSEDRGVIFGMIQAPQ 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 575 SISLGSAAALDLQVEKALLDgVPEIRSVIARSGadelGLDPMGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGFPGL 654
Cdd:NF033617 566 SISLDYMSAKMRDVEKILSS-DPEVQSLTSFNG----VGGNPGDNTGFGIINLKPWDERDVSAQEIIDRLRPKLAKVPGM 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 655 DysitqPIEMRVAEMLTGSRGDLVVKIY---GPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLAMGR 731
Cdd:NF033617 641 D-----LFLFPLQDLPGGAGSSLPQYQVtltPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPELNVDIDRDKAAR 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 732 AGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAH 811
Cdd:NF033617 716 LGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNH 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 812 ENGSRFAAVQAN----VSGRDLVGFVDDARRAVakavpLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTF 887
Cdd:NF033617 796 FNQFNSATLSFNlapgVSLGEAIEALDQAAKEL-----LPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYLVLAIQY 870
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 888 GSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNEL-LERGLPLVEAVRTGAQRRL 966
Cdd:NF033617 871 ESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELqRHQGLSRREAIYQAAALRL 950
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 967 RPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTaltlillplLFTRFGLP 1026
Cdd:NF033617 951 RPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGT---------LFTLFVLP 1001
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
29-1009 |
1.16e-103 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 349.41 E-value: 1.16e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKY-GIADITVDFQEGTDIYW 107
Cdd:TIGR00915 23 GTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSDSdGSMTITLTFEQGTDPDI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 108 ARQQVGEALANVRGDLPAG-TQGGLApiATPLSDVFMFTV-----DGDASLAAKRDALQWIIRPQLRTLPGVADVNMLGG 181
Cdd:TIGR00915 103 AQVQVQNKLQLATPLLPQEvQRQGVR--VEKASSNFLMVIglvsdDGSMTKEDLSDYAASNMVDPLSRLEGVGDVQLFGS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 182 DvRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGR------VEEGELTRIVRVQGAFRNGDDIANTVV-AQRAGQT 254
Cdd:TIGR00915 181 Q-YAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQlgglpaVPGQQLNATIIAQTRLQTPEQFENILLkVNTDGSQ 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 255 LRVRDLAEVrEEALTRYGVVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVG 334
Cdd:TIGR00915 260 VRLKDVARV-ELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFPQGMKYVYPYDTTPFVEASIE 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 335 TVSHALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENlVH 414
Cdd:TIGR00915 339 EVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAMVLAIGLLVDDAIVVVEN-VE 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 415 HLAHDPGrpLDQDRAVGQRLDRILHAVREVAAPVTAgvgiiviVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTL 494
Cdd:TIGR00915 418 RVMAEEG--LPPKEATRKSMGQIQGALVGIAMVLSA-------VFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALIL 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 495 VPVLASLLLRQGPAEDP---------WLVR---RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLD 562
Cdd:TIGR00915 489 TPALCATMLKPIEKGEHhekkggffgWFNRmfdSSTHGYENGVGKILRRRGRYLLVYVLLVGGMVFLFVRLPTSFLPDED 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 563 EGDVIVQLQTLPSISLGSAAALDLQVEKALL-DGVPEIRSVIARSGadeLGLDPMGLNETDMFTVLKPSKEWRGDKESVI 641
Cdd:TIGR00915 569 QGVFMTIVQLPAGATAERTQAVLAQVTKYLLaKEKANVESVFTVNG---FSFAGRGQNMGMAFIRLKDWEERTGKENSVF 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 642 AAMRRVLDGFPGLDYSITQPIEM-RVAEMLTGSRGDLVVkiygpdIAQLGELAQKVAATLRGLPGAA----EVLAARPEG 716
Cdd:TIGR00915 646 AIAGRATGHFMQIKDAMVIAFVPpAILELGNATGFDFFL------QDRAGLGHEALLQARNQLLGLAaqnpALTRVRPNG 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 717 VE---YLNVELDRLAMGRAGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYP 793
Cdd:TIGR00915 720 LEdepQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGEMVP 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 794 LQNLAHLRAIQGPVQVAHENGsrFAAVqaNVSGRDLVGF-VDDARRAVAK-AVPLPPEVHIEWGGQFENQQRAAARLGLV 871
Cdd:TIGR00915 800 FSAFATVRWEYGSPQLERYNG--LPSM--EILGSAAPGVsTGQAMAAMEAiAQKLPPGFGFSWTGMSYEERLSGSQAPAL 875
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 872 VPIALLLIFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERG 951
Cdd:TIGR00915 876 YALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKELMAQG 955
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*...
gi 503768167 952 LPLVEAVRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSST 1009
Cdd:TIGR00915 956 KSIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTAT 1013
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
29-1008 |
3.32e-73 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 262.74 E-value: 3.32e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:PRK10614 25 GILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILQFDFDRDINGA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLPAGTQGGLAPIATPLSD--VFMFTVDGDA-SLAAKRDALQWIIRPQLRTLPGVADVNMLGGDVRA 185
Cdd:PRK10614 105 ARDVQAAINAAQSLLPSGMPSRPTYRKANPSDapIMILTLTSDTySQGQLYDFASTQLAQTISQIDGVGDVDVGGSSLPA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 186 FAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVRE 265
Cdd:PRK10614 185 VRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGAAVRLGDVATVTD 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 266 EaltrygvvTQDGRHEAVEG-------IVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSH 338
Cdd:PRK10614 265 S--------VQDVRNAGMTNakpaillMIRKLPEANIIQTVDRIRAKLPELRETIPAAIDLQIAQDRSPTIRASLEEVEQ 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 339 ALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLah 418
Cdd:PRK10614 337 TLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHL-- 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 419 dpgrpldqdRAVGQRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVL 498
Cdd:PRK10614 415 ---------EAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGISLLVSLTLTPMM 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 499 ASLLLRQGPAEDPWLVRRLSHIYTGV-------LDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQ 571
Cdd:PRK10614 486 CAWLLKSSKPREQKRLRGFGRMLVALqqgygrsLKWVLNHTRWVGVVLLGTIALNVWLYISIPKTFFPEQDTGRLMGFIQ 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 572 TLPSISLgSAAALDLQVEKALLDGVPEIRSVIARSGADElgldpmgLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGF 651
Cdd:PRK10614 566 ADQSISF-QAMRGKLQDFMKIIRDDPAVDNVTGFTGGSR-------VNSGMMFITLKPLSERSETAQQVIDRLRVKLAKE 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 652 PGLDYSItqpieMRVAEMLTGSRGDLVVKIY---GPDIAQLGELAQKVAATLRGLPGAAEVLAARPEGVEYLNVELDRLA 728
Cdd:PRK10614 638 PGANLFL-----MAVQDIRVGGRQSNASYQYtllSDDLAALREWEPKIRKALAALPELADVNSDQQDKGAEMALTYDRDT 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 729 MGRAGFDAStlegDLRALLE---GQPQ-GTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQ 804
Cdd:PRK10614 713 MARLGIDVQ----AANSLLNnafGQRQiSTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPAN 788
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 805 GPVQVAHENGSRFAAVQANV-SGRDLVGFVDDARRAVAkAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVIL 883
Cdd:PRK10614 789 APLSVNHQGLSAASTISFNLpTGKSLSDASAAIERAMT-QLGVPSTVRGSFAGTAQVFQETMNSQLILILAAIATVYIVL 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 884 LTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVShFNELLER--GLPLVEAVRTG 961
Cdd:PRK10614 868 GILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVD-FALEAQRngNLTAQEAIFQA 946
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*..
gi 503768167 962 AQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSS 1008
Cdd:PRK10614 947 CLLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMS 993
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
29-1026 |
7.98e-69 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 249.75 E-value: 7.98e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDiywA 108
Cdd:PRK09579 25 GFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTSVSRQNFSIISIYARIGAD---S 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALAN---VRGDLPAGTQGGL----APIATPLSDVFMFTvdGDASLAAKRDALQWIIRPQLRTLPGVADVNMLGG 181
Cdd:PRK09579 102 DRLFTELLAKaneVKNQLPQDAEDPVlskeAADASALMYISFYS--EEMSNPQITDYLSRVIQPKLATLPGMAEAEILGN 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 182 DVRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLA 261
Cdd:PRK09579 180 QVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEAFAAIPVKTSGDSRVLLGDVA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 262 EVREEALTRYGVVTQDGRHEAVEGIVvALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALL 341
Cdd:PRK09579 260 RVEMGAENYDSISSFDGIPSVYIGIK-ATPSANPLDVIKEVRAIMPELESQLPPNLKVSIAYDATLFIQASIDEVVKTLG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 342 EAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLahDPG 421
Cdd:PRK09579 339 EAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHI--EEG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 422 RPldqdravgqRLDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASL 501
Cdd:PRK09579 417 KS---------PFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMMCAL 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 502 LLRqgPAEDP------------WLVRRLSHIYTGVLDfaFRHRGLVYATAVLALLAAGIAYTRigKTFMPTLDEGDVIVQ 569
Cdd:PRK09579 488 LLR--HEENPsglahrldrlfeRLKQRYQRALHGTLN--TRPVVLVFAVIVLALIPVLLKFTQ--SELAPEEDQGIIFMM 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 570 LQTLPSISLGSAAALDLQVEKaLLDGVPEIRSVIARSGADELGLDPMGLnetdmftVLKPSKEWRGDKESVIAAMRRVLD 649
Cdd:PRK09579 562 SSSPQPANLDYLNAYTDEFTP-IFKSFPEYYSSFQINGFNGVQSGIGGF-------LLKPWNERERTQMELLPLVQAKLE 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 650 GFPGLdysitQPIEMRVAEMLTGSRG---DLVVKIYGpDIAQLGELAQKVA--ATLRGLPGAAEVLAA--RPEGVeylnV 722
Cdd:PRK09579 634 EIPGL-----QIFGFNLPSLPGTGEGlpfQFVINTAN-DYESLLQVAQRVKqrAQESGKFAFLDIDLAfdKPEVV----V 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 723 ELDRLAMGRAGFDASTLEGDLRALL-EGQPQGTLLEGvRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLR 801
Cdd:PRK09579 704 DIDRAKAAQMGVSMQDLGGTLATLLgEGEINRFTIDG-RSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLPLSTLITLS 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 802 AIQGPVQVahengSRFAAVQ-ANVSGRDLVGFVD--DARRAVAKAvPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLL 878
Cdd:PRK09579 783 DRARPRQL-----NQFQQLNsAIISGFPIVSMGEaiETVQQIARE-EAPEGFAFDYAGASRQYVQEGSALWVTFGLALAI 856
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 879 IFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELL-ERGLPLVEA 957
Cdd:PRK09579 857 IFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRhEQGLSRREA 936
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503768167 958 VRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTaltlillplLFTRFGLP 1026
Cdd:PRK09579 937 IEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGT---------LFTLFVLP 996
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
29-1010 |
1.06e-66 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 243.61 E-value: 1.06e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:PRK09577 23 GIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSAGQASLSLTFKQGVNADLA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVRGDLP-----AGTQggLAPIATPLSDVFMFTVDgDASLA-------AKRDALQwiirpQLRTLPGVADV 176
Cdd:PRK09577 103 AVEVQNRLKTVEARLPepvrrDGIQ--VEKAADNIQLIVSLTSD-DGRLTgvelgeyASANVLQ-----ALRRVEGVGKV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 177 NMLGGDVrAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRV------EEGELTRIVRVQGAFRNGDDIANTVVAQR 250
Cdd:PRK09577 175 QFWGAEY-AMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIgrsavpDSAPIAATVFADAPLKTPEDFGAIALRAR 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 251 A-GQTLRVRDLAEVrEEALTRYGVVTQ-DGRHEAVEGIVVAlKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQL 328
Cdd:PRK09577 254 AdGSALYLRDVARI-EFGGNDYNYPSYvNGKTATGMGIKLA-PGSNAVATEKRVRATMDELSRYFPPGVKYQIPYETSSF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 329 VDRAVGTVSHALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVV 408
Cdd:PRK09577 332 VRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVLAIGILVDDAIVV 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 409 VENLVHHLAHDPGRPLDQdravgqrldrILHAVREVAAPVtagVGIIVI---VFLPLLSLEGLEGKLFRPVAQTIVYALG 485
Cdd:PRK09577 412 VENVERLMVEEGLSPYDA----------TVKAMKQISGAI---VGITVVltsVFVPMAFFGGAVGNIYRQFALSLAVSIG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 486 ASLLIALTLVPVLASLLLR--QGPAEDP-----WLVR---RLSHIYT----GVLDFAFRHRgLVYATAVLALLAAgiaYT 551
Cdd:PRK09577 479 FSAFLALSLTPALCATLLKpvDGDHHEKrgffgWFNRfvaRSTQRYAtrvgAILKRPLRWL-VVYGALTAAAALL---FT 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 552 RIGKTFMPTLDEGDVIVQLQTLPSISLGSAAALDLQVEKALLDGVPeIRSVIARSGADELGldpMGLNETDMFTVLKPSK 631
Cdd:PRK09577 555 RLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEP-VAYTFALGGFNLYG---EGPNGGMIFVTLKDWK 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 632 EWRGDKESVIAAMRRVLDGFPGLDYSITQPIEMRVAEMLTGSRG-DLVVKIYGP-DIAQLGELAQKVAATLRGLPGAAEV 709
Cdd:PRK09577 631 ERKAARDHVQAIVARINERFAGTPNTTVFAMNSPALPDLGSTSGfDFRLQDRGGlGYAAFVAAREQLLAEGAKDPALTDL 710
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 710 LAARPEGVEYLNVELDRLAMGRAGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQG 789
Cdd:PRK09577 711 MFAGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLRVRNAQG 790
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 790 VSYPLQNLAHLRAIQGPVQVAHENGSRFAAVQANVSGRDLVGfvdDARRAVAK-AVPLPPEVHIEWGGQFENQQRAAARL 868
Cdd:PRK09577 791 EMVPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAAPGHSSG---EAMAAIERiAATLPAGIGYAWSGQSFEERLSGAQA 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 869 GLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELL 948
Cdd:PRK09577 868 PMLFALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAKDLV 947
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503768167 949 ERGLPLVEAVRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:PRK09577 948 AQRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATV 1009
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
29-1009 |
9.92e-65 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 237.81 E-value: 9.92e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKY-GIADITVDFQEGTDIYW 107
Cdd:PRK10555 23 GTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGtGQASVTLSFKAGTDPDE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 108 ARQQVGEALANVRGDLPAGTQG-GLAPIATPLSDVFMFT-VDGDASLAaKRDALQWI---IRPQLRTLPGVADVNMLGGD 182
Cdd:PRK10555 103 AVQQVQNQLQSAMRKLPQAVQNqGVTVRKTGDTNILTIAfVSTDGSMD-KQDIADYVasnIQDPLSRVNGVGDIDAYGSQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 183 VrAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGR------VEEGELTRIVRVQGAFRNGDDIAN-TVVAQRAGQTL 255
Cdd:PRK10555 182 Y-SMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQlggtpsVDKQALNATINAQSLLQTPEQFRDiTLRVNQDGSEV 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 256 RVRDLAEV-----REEALTRYgvvtqDGRHEAVEGIVVAlKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVD 330
Cdd:PRK10555 261 TLGDVATVelgaeKYDYLSRF-----NGKPASGLGVKLA-SGANEMATAKLVLNRLDELAQYFPHGLEYKVAYETTSFVK 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 331 RAVGTVSHALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVE 410
Cdd:PRK10555 335 ASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVLAIGLLVDDAIVVVE 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 411 NlVHHLAHDPGrpLDQDRAVGQRLDRILHAVREVAAPVTAgvgiiviVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLI 490
Cdd:PRK10555 415 N-VERIMSEEG--LTPREATRKSMGQIQGALVGIAMVLSA-------VFVPMAFFGGTTGAIYRQFSITIVSAMVLSVLV 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 491 ALTLVPVLASLLLR---QGPAEDP-----WLVR---RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMP 559
Cdd:PRK10555 485 AMILTPALCATLLKplkKGEHHGQkgffgWFNRmfnRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPTSFLP 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 560 TLDEGDVIVQLQTLPSISLGSAAALDLQVEKALL-DGVPEIRSVIARSGADELGldpMGLNETDMFTVLKPSKEWRGDKE 638
Cdd:PRK10555 565 LEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFtHEKDNVMSVFATVGSGPGG---NGQNVARMFIRLKDWDERDSKTG 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 639 SVIAAMRRVLDGFPGLDysitqpiEMRVAEM-------LTGSRG-DLVVKiygpDIAQLGELAQkVAATLRGLPGAA--- 707
Cdd:PRK10555 642 TSFAIIERATKAFNKIK-------EARVIASsppaisgLGSSAGfDMELQ----DHAGAGHDAL-MAARNQLLALAAknp 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 708 EVLAARPEGVE---YLNVELDRLAMGRAGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRV 784
Cdd:PRK10555 710 ELTRVRHNGLDdspQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYV 789
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 785 DNGQGVSYPLQNLAHLRAIQGPVQVAHENG-SRFAAVQANVSGRDLVGFVDDARRAVAKavpLPPEVHIEWGGQFENQQR 863
Cdd:PRK10555 790 RNKDGGMVPFSAFATSRWETGSPRLERYNGySAVEIVGEAAPGVSTGTAMDIMESLVKQ---LPNGFGLEWTAMSYQERL 866
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 864 AAARLGLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSH 943
Cdd:PRK10555 867 SGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEF 946
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 503768167 944 FNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSST 1009
Cdd:PRK10555 947 ANEMNQKGHDLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISAT 1012
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
29-1010 |
1.16e-63 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 234.80 E-value: 1.16e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLS-KYGIADITVDFQEGTDIYW 107
Cdd:PRK15127 23 GGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdSTGTVQITLTFESGTDADI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 108 ARQQVGEALANVRGDLPAGTQGGLAPIATPLSDVFM----FTVDGDASLAAKRDALQWIIRPQLRTLPGVADVNMLGGDV 183
Cdd:PRK15127 103 AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMvvgvINTDGTMTQEDISDYVAANMKDPISRTSGVGDVQLFGSQY 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 184 rAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGR------VEEGELTRIVRVQGAFRNGDDIANTVVAQRA-GQTLR 256
Cdd:PRK15127 183 -AMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQlggtppVKGQQLNASIIAQTRLTSTEEFGKILLKVNQdGSRVR 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 257 VRDLAEVrEEALTRYGVVTQ-DGRHEAVEGIVVAlKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGT 335
Cdd:PRK15127 262 LRDVAKI-ELGGENYDIIAEfNGQPASGLGIKLA-TGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHE 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 336 VSHALLEAIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENlVHH 415
Cdd:PRK15127 340 VVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVEN-VER 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 416 LAHDPGRPLDQdrAVGQRLDRILHAVREVAAPVTAgvgiiviVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLV 495
Cdd:PRK15127 419 VMAEEGLPPKE--ATRKSMGQIQGALVGIAMVLSA-------VFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILT 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 496 PVLASLLLR------QGPAED---PWLVR---RLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDE 563
Cdd:PRK15127 490 PALCATMLKpiakgdHGEGKKgffGWFNRmfeKSTHHYTDSVGNILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQ 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 564 GDVIVQLQtLPsislgsAAALDLQVEKaLLDGVPE---------IRSVIARSGadeLGLDPMGLNETDMFTVLKPSKEWR 634
Cdd:PRK15127 570 GVFLTMVQ-LP------AGATQERTQK-VLNEVTDyyltkeknnVESVFAVNG---FGFAGRGQNTGIAFVSLKDWADRP 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 635 GDKESVIAAMRRVLDGFPGLDYSITQPIEM-RVAEMLTGSRGDLVVkiygpdIAQLGELAQKVAATLRGLPGAAE----- 708
Cdd:PRK15127 639 GEENKVEAITMRATRAFSQIKDAMVFAFNLpAIVELGTATGFDFEL------IDQAGLGHEKLTQARNQLLGEAAkhpdm 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 709 VLAARPEGVE---YLNVELDRLAMGRAGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFAS--VR 783
Cdd:PRK15127 713 LVGVRPNGLEdtpQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDwyVR 792
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 784 VDNGQGVSYPLQNLAHLRaiQGPVQVAHENGSRFAAVQANVSGRDLVGFVDDARRAVAKAvpLPPEVHIEWGGQFENQQR 863
Cdd:PRK15127 793 AADGQMVPFSAFSSSRWE--YGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEELASK--LPTGVGYDWTGMSYQERL 868
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 864 AAARLGLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSH 943
Cdd:PRK15127 869 SGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEF 948
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503768167 944 FNELLER-GLPLVEAVRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTA 1010
Cdd:PRK15127 949 AKDLMDKeGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATV 1016
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
29-1008 |
3.18e-59 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 221.14 E-value: 3.18e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 29 GIVAWRSLPIDAFPDVSAPQVKIILKAPGMTPEEVETRVVLPVEQELLGIARETQVRSLSKYGIADITVDFQEGTDIYWA 108
Cdd:PRK10503 34 GIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVA 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 109 RQQVGEALANVR----GDLP-AGTQGGLAPIATPlsdVFMFTVDGDA-SLAAKRDALQWIIRPQLRTLPGVADVNMLGGD 182
Cdd:PRK10503 114 EQEVQAAINAATnllpSDLPnPPVYSKVNPADPP---IMTLAVTSTAmPMTQVEDMVETRVAQKISQVSGVGLVTLSGGQ 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 183 VRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQGAFRNGDDIANTVVAQRAGQTLRVRDLAE 262
Cdd:PRK10503 191 RPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVAT 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 263 VrEEALTRYGVVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIAPRLPQGMTVHSFYDRSQLVDRAVGTVSHALLE 342
Cdd:PRK10503 271 V-EQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELML 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 343 AIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAAVVVVENLVHHLAHdpgr 422
Cdd:PRK10503 350 AIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEK---- 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 423 pldqdravGQR-LDRILHAVREVAAPVTAGVGIIVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASL 501
Cdd:PRK10503 426 --------GEKpLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCAR 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 502 LLRQGP--------AEDPWLVRRLSHIYTGVLDFAFRHRGLVYATAVLALLAAGIAYTRIGKTFMPTLDEGDVIVQLQTL 573
Cdd:PRK10503 498 MLSQESlrkqnrfsRASERMFDRVIAAYGRGLAKVLNHPWLTLSVALSTLLLTVLLWIFIPKGFFPVQDNGIIQGTLQAP 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 574 PSISLGSAAALDLQVEKALLDGvPEIRSVIARSGADelGLDPmGLNETDMFTVLKPSKEWRGDKESVIAAMRRVLDGFPG 653
Cdd:PRK10503 578 QSSSFANMAQRQRQVADVILQD-PAVQSLTSFVGVD--GTNP-SLNSARLQINLKPLDERDDRVQKVIARLQTAVAKVPG 653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 654 LDYSItQPIEMRVAEMLTgSRGDLVVKIYGPDIAQLGELAQKVAATLRGLPGAAEVLAARPEG--VEYLNVelDRLAMGR 731
Cdd:PRK10503 654 VDLYL-QPTQDLTIDTQV-SRTQYQFTLQATSLDALSTWVPKLMEKLQQLPQLSDVSSDWQDKglVAYVNV--DRDSASR 729
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 732 AGFDASTLEGDLRALLEGQPQGTLLEGVRPVPILLRAGEALRSNPEAFASVRVDNGQGVSYPLQNLAHLRAIQGPVQVAH 811
Cdd:PRK10503 730 LGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIATIEQRFGPLSINH 809
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 812 ENGSRFAAVQANVSGRDLVGFVDDARRAVAKAVPLPPEVHIEWGGQFENQQRAAARLGLVVPIALLLIFVILLTTFGSLR 891
Cdd:PRK10503 810 LDQFPSTTISFNVPDGYSLGDAVQAIMDTEKTLNLPADITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGVLYESFI 889
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 892 QSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVShFNELLER--GLPLVEAVRTGAQRRLRPV 969
Cdd:PRK10503 890 HPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMID-FALAAEReqGMSPRDAIYQACLLRFRPI 968
|
970 980 990
....*....|....*....|....*....|....*....
gi 503768167 970 MMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSS 1008
Cdd:PRK10503 969 LMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVS 1007
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
30-504 |
5.33e-15 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 80.15 E-value: 5.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 30 IVAWRSLPIDAFPDVSAPQVKIILKAP-GMTPEEVEtRVVLPVEQELLGIARETQVRSLSKYGI-------ADITVDFQE 101
Cdd:COG0841 541 VLLFGRLPTEFFPEEDQGQIIVSVQLPpGTSLERTE-AVVRQVEEILLEVPEVESVFSVVGFSGggsgsnsGTIFVTLKP 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 102 GTDIYWARQQVGEALANVRGDLPAGT------QGGLAPIATPLSdvFMFTVDGDASLAAKRDALqwiiRPQLRTLPGVAD 175
Cdd:COG0841 620 WDERDRSADEIIARLREKLAKIPGARvfvfqpPAGGLGSGAPIE--VQLQGDDLEELAAAAEKL----LAALRQIPGLVD 693
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 176 VNM-LGGDVRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGELTRIVRVQG--AFRNG-DDIANTVVAQRA 251
Cdd:COG0841 694 VRSdLQLGKPELQLDIDREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQApeEDRNSpEDLENLYVRTPD 773
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 252 GQTLRVRDLAEVREEalTRYGVVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIAprLPQGMTVhSFYDRSQLVDR 331
Cdd:COG0841 774 GEMVPLSSVATIEEG--TGPSSINRYNGQRSVTVSANLAPGVSLGEALAAIEELAAELK--LPPGVSI-EFTGQAEEEQE 848
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 332 AVGTVSHALLEAIVLvvvlllIFL------GNWRAATVVAVTIPLSALATFILMKVTGLSANLMSLGGLAIALGMLVDAA 405
Cdd:COG0841 849 SFSSLGLAFLLALLL------VYLvlaaqfESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNA 922
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 406 VVVVENLVHHLAHdpGRPLdqdravgqrLDRILHAVREVAAPV-----TAGVGIivivfLPLLSLEGLEGKLFRPVAQTI 480
Cdd:COG0841 923 ILLVDFANQLREE--GMSL---------REAILEAARLRLRPIlmtslATILGL-----LPLALGTGAGAEFRQPLGIAV 986
|
490 500
....*....|....*....|....
gi 503768167 481 VYALGASLLIALTLVPVLASLLLR 504
Cdd:COG0841 987 IGGLLFSTLLTLFVVPVLYVLLDR 1010
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
822-990 |
1.29e-11 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 68.73 E-value: 1.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 822 ANVSGRDLVGFVDDARRAVAKAVPlPPEVHIEWGGQF----ENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQS--AL 895
Cdd:COG1033 558 KDLDSEEIKALVEEVRAFLAENFP-PDGVEVTLTGSAvlfaAINESVIESQIRSLLLALLLIFLLLLLAFRSLRLGliSL 636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 896 IFINIPFALVGGVIALwaSGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASI 975
Cdd:COG1033 637 IPNLLPILLTFGLMGL--LGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLT 714
|
170
....*....|....*
gi 503768167 976 TALGLIPLLFATGPG 990
Cdd:COG1033 715 LAAGFGVLLFSSFPP 729
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
832-986 |
4.79e-11 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 66.81 E-value: 4.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 832 FVDDARRAVAKAVPLPPEVHIewGGQF----ENQQRAAARLGLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVGG 907
Cdd:COG1033 182 VVAEIRAIIAKYEDPGVEVYL--TGFPvlrgDIAEAIQSDLAIFFPLALLLILLLLFLFFRSLRGVLLPLLVVLLAVIWT 259
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503768167 908 VIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGLIPLLFA 986
Cdd:COG1033 260 LGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLFS 338
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
231-502 |
7.59e-07 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 53.33 E-value: 7.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 231 RVQGAFRNGDDIANTVVAQRAGQTLRVRDLAEVREEALTRYgvVTQDGRHEAVEGIVVALKGANASQVIRGVKARLAEIA 310
Cdd:COG1033 503 ELNQALNEGDPKYYALPESRELLAQLLLLLSSPPGDDLSRF--VDEDYSAARVTVRLKDLDSEEIKALVEEVRAFLAENF 580
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 311 PrlPQGMTVHsFYDRSQLVDRAVGTVSHALLE----AIVLVVVLLLIFLGNWRAATVVAVTIPLSALATFILMKVTGLSA 386
Cdd:COG1033 581 P--PDGVEVT-LTGSAVLFAAINESVIESQIRslllALLLIFLLLLLAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPL 657
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 387 NLMSLGGLAIALGMLVDAAVVVVENLVHHLAHDpgrpLDQDRAvgqrldrILHAVREVAAPVTAGVGIIVIVFLPL-LSl 465
Cdd:COG1033 658 NIATAVVASIALGIGVDYTIHFLSRYREERRKG----GDLEEA-------IRRALRTTGKAILFTSLTLAAGFGVLlFS- 725
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 503768167 466 eglegkLFRPVAQ---TIVYALGASLLIALTLVPVLASLL 502
Cdd:COG1033 726 ------SFPPLADfglLLALGLLVALLAALLLLPALLLLL 759
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
163-504 |
1.77e-06 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 52.34 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 163 IRPQLRTLPGVADVNM--LGGdVRAFAVEPDPAKLTAFGISLDRLRQALQSNNSNDGAGRVEEGEltR----IVRVQGAF 236
Cdd:COG3696 694 IEAVLKTVPGAADVQVerVTG-LPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGE--RrfdiVVRLPEEL 770
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 237 RNG-DDIANTVVAQRAGQTLRVRDLAEVRE---------EALTRYGVVTQDGRHEAVEGIVVALKGANASQVirgvkarl 306
Cdd:COG3696 771 RDDpEAIRNLPIPTPSGAQVPLSQVADIEVvegpnqisrENGRRRIVVQANVRGRDLGSFVAEAQAKVAEQV-------- 842
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 307 aeiapRLPQGMTVH---SFYDRSQLVDRAVGTVSHALLeaivlvvvllLIFL------GNWRAATVVAVTIPLSALATFI 377
Cdd:COG3696 843 -----KLPPGYYIEwggQFENLQRATARLAIVVPLALL----------LIFLllylafGSVRDALLILLNVPFALIGGVL 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 378 LMKVTGLSANLMSLGGLaIAL-GMLVDAAVVVVENLVHHLAHdpGRPLDqdravgqrlDRILHAVREVAAPV--TAGVgi 454
Cdd:COG3696 908 ALWLRGMPLSVSAGVGF-IALfGVAVLNGVVLVSYINQLRAE--GLDLR---------EAIIEGALERLRPVlmTALV-- 973
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 503768167 455 IVIVFLPLLSLEGLEGKLFRPVAQTIVYALGASLLIALTLVPVLASLLLR 504
Cdd:COG3696 974 AALGLLPMALSTGPGSEVQRPLATVVIGGLITSTLLTLLVLPALYLLFGR 1023
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
833-986 |
2.03e-06 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 51.69 E-value: 2.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 833 VDDARRAVAKAvpLPPEVHIEWGGQ---FENQQRAAAR-LGLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVGGV 908
Cdd:COG2409 134 VDALRDAVAAA--PAPGLTVYVTGPaalAADLNEAFEEdLGRAELITLPVALVVLLLVFRSLVAALLPLLTAGLAVGVAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 909 IALWASGLYLSVPA-SVGFIALLGIAVlnGV----VLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGLIPL 983
Cdd:COG2409 212 GLLALLAAFTDVSSfAPNLLTMLGLGV--GIdyalFLVSRYREELRAGEDREEAVARAVATAGRAVLFSGLTVAIALLGL 289
|
...
gi 503768167 984 LFA 986
Cdd:COG2409 290 LLA 292
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
833-1036 |
4.54e-06 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 49.98 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 833 VDDARRAVAKAVPLPPeVHIEWGG---QFENQQRAAAR-LGLVVPIALLLIFVILLTTFGSLRQSALIFINIPFALVG-- 906
Cdd:pfam03176 106 VAAVRDAVEQAPPPEG-LKAYLTGpaaTVADLRDAGDRdLGLIEAVTLVVIFIILLIVYRSVVAALLPLLTVGLSLGAaq 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 907 GVIALWASGLYLSVPASV---GFIALLGIAVLNGVVLVSHFNELLERGLPLVEAVRTgAQRRLRPVMMTASIT-ALGLIP 982
Cdd:pfam03176 185 GLVAILAHILGIGLSTFAlnlLVVLLIAVGTDYALFLVSRYREELRAGEDREEAVIR-AVRGTGKVVTAAGLTvAIAMLA 263
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 503768167 983 LLFATGPgseIQKPLAVVVVGGLLSSTALTLILL---PLLFTRFGLPPQKPDSGAKG 1036
Cdd:pfam03176 264 LSFARLP---VFAQVGPTIAIGVLVDVLAALTLLpalLALLGRWGLWPPKRDRTARW 317
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
833-987 |
1.50e-03 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 42.45 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 833 VDDARRAVAkavPLPPEVHIEWGGQ----FENQQRAAARLGLVVPIALLLIFVILLTTFGSlrqsalifINIPFALVGGV 908
Cdd:COG2409 483 VDRLRDAAA---PALEGAEVLVGGTtavnIDISDALADDLPLVIPVVLGLIFLLLLLLFRS--------VVAPLKAVLTN 551
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 909 I-----------ALWASGLYL---SVPASVGFIALLGIAVLNG------VVLVSHFNELLERGLPLVEAVRTGAQRrlrp 968
Cdd:COG2409 552 LlslgaalgvlvLVFQHGWLLlgfTPGPLDSFVPLLLFVILFGlgmdyeVFLVSRIREEYDRGGGTREAVIRGLAR---- 627
|
170 180
....*....|....*....|
gi 503768167 969 vmmTAS-ITALGLIplLFAT 987
Cdd:COG2409 628 ---TGRvITSAALI--MAAV 642
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
875-1034 |
7.05e-03 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 40.66 E-value: 7.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 875 ALLLIFVILLTTFGSLRQSALIFINIPFALVGGVIALWASGLYLSVPASVGFIALLGIAVLNGVVLVSHFNELL-ERGLP 953
Cdd:PRK15127 347 AIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMaEEGLP 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 954 LVEAVRTGAQRRLRPVMMTASITALGLIPLLFATGPGSEIQKPLAVVVVGGLLSSTALTLILLPLLFTRFGLPPQKPDSG 1033
Cdd:PRK15127 427 PKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHG 506
|
.
gi 503768167 1034 A 1034
Cdd:PRK15127 507 E 507
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
835-980 |
7.97e-03 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 40.37 E-value: 7.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503768167 835 DARRAVAKAVPLPPE----VHIEWGGQFENQQRAAARLGLVV--PIALLLIFVILLTTFGSLRqsalIFINIPFALVGGV 908
Cdd:TIGR03480 232 NAIRAAAKDLRLDEDhgvtVRLTGEVALSDEELATVSEGATVagLLSFVLVLVLLWLALRSPR----LVFAVLVTLIVGL 307
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 503768167 909 IALWASGLyLSV----PASVGFIALL-GIAVLNGVVLVSHFNELLERGLPLVEAVRTGAQRRLRPVMMTASITALGL 980
Cdd:TIGR03480 308 ILTAAFAT-LAVghlnLISVAFAVLFiGLGVDFAIQFSLRYREERFRGGNHREALSVAARRMGAALLLAALATAAGF 383
|
|
| |
