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Conserved domains on  [gi|503492307|ref|WP_013726968|]
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arsenate reductase (thioredoxin) [Lentilactobacillus buchneri]

Protein Classification

low molecular weight phosphatase family protein( domain architecture ID 435)

low molecular weight phosphatase (LMWP) family protein similar to arsenate reductase that plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification

CATH:  3.40.50.2300
SCOP:  4000436

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LMWP super family cl00105
Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group ...
 6-134 2.87e-84

Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group of small soluble enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). This family includes protein tyrosine phosphatases, arginine phosphatases and arsenate reductases.


The actual alignment was detected with superfamily member TIGR02691:

Pssm-ID: 469616  Cd Length: 129  Bit Score: 242.77  E-value: 2.87e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLCSDA 85
Cdd:TIGR02691   1 IYFLCTGNSCRSQMAEGWGKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDLIDLDILNKADLVVTLCGDA 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 503492307   86 EKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDF 134
Cdd:TIGR02691  81 RDKCPATPPHVKREHWGLDDPARAEGTEEEKWAVFRRVRDEIKERVKDF 129
 
Name Accession Description Interval E-value
arsC_pI258_fam TIGR02691
arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent ...
 6-134 2.87e-84

arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent arsenate reductase of Staphylococcus aureaus plasmid pI258 and other mechanistically similar arsenate reductases. The mechanism involves an intramolecular disulfide bond cascade, and aligned members of this family have four absolutely conserved Cys residues. This group of arsenate reductases belongs to the low-molecular weight protein-tyrosine phosphatase family (pfam01451), as does a group of glutathione/glutaredoxin type arsenate reductases (TIGR02689). At least two other, non-homologous groups of arsenate reductases involved in arsenical resistance are also known. This enzyme reduces arsenate to arsenite, which may be more toxic but which is more easily exported. [Cellular processes, Detoxification]


Pssm-ID: 131738  Cd Length: 129  Bit Score: 242.77  E-value: 2.87e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLCSDA 85
Cdd:TIGR02691   1 IYFLCTGNSCRSQMAEGWGKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDLIDLDILNKADLVVTLCGDA 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 503492307   86 EKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDF 134
Cdd:TIGR02691  81 RDKCPATPPHVKREHWGLDDPARAEGTEEEKWAVFRRVRDEIKERVKDF 129
LMWP_ArsC cd16345
Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the ...
 6-134 3.49e-77

Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).


Pssm-ID: 319973  Cd Length: 132  Bit Score: 224.64  E-value: 3.49e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLCSDA 85
Cdd:cd16345    2 VLFLCTGNSARSQMAEALLRHLGGDRFEAYSAGSEPAGVNPLAIEVMKEIGIDISGQRSKSLDEFLGQEFDYVITVCDNA 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 503492307  86 EKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDF 134
Cdd:cd16345   82 AEVCPVFPGAVKRLHWGFPDPAAAEGSEEEKLEAFRRVRDEIKERIEAL 130
PRK13530 PRK13530
arsenate reductase (thioredoxin);
1-135 8.79e-77

arsenate reductase (thioredoxin);


Pssm-ID: 237415  Cd Length: 133  Bit Score: 223.85  E-value: 8.79e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   1 MGQKTIYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVT 80
Cdd:PRK13530   1 MNKKTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMKEVGIDISNQTSDIIDNDILNNADLVVT 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 503492307  81 LCSDAEKRCPITPPQVARQHWPFPDPAAAtgssseQLQVFREVRDAIKARIIDFA 135
Cdd:PRK13530  81 LCSHADDVCPSTPPHVKRVHWGFDDPAGK------EWSEFQRVRDEIGERIKRFA 129
Wzb COG0394
Protein-tyrosine-phosphatase [Signal transduction mechanisms];
1-136 5.76e-52

Protein-tyrosine-phosphatase [Signal transduction mechanisms];


Pssm-ID: 440163  Cd Length: 137  Bit Score: 161.10  E-value: 5.76e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   1 MGQKTIYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHG-VNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVV 79
Cdd:COG0394    1 MMPKRVLFVCTGNICRSPMAEALLRHLAGGRVEVDSAGTEPGGpVDPRAVAVLAERGIDLSGHRSRQLDEEDLPEFDLVI 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 503492307  80 TLCSDA-EKRCPITPPQV-ARQHWPFPDPAAATgssseqLQVFREVRDAIKARIIDFAN 136
Cdd:COG0394   81 TMCDSAaEELCPLFPGAAkLLLHWDVPDPYYGG------LEAFREVRDEIERRIEALLA 133
LMWPc smart00226
Low molecular weight phosphatase family;
6-136 6.70e-31

Low molecular weight phosphatase family;


Pssm-ID: 197586  Cd Length: 134  Bit Score: 107.56  E-value: 6.70e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307     6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEK---HGVNPMAVQVMAEAGVDISSQTSKlIDPTILNHADLVVTLC 82
Cdd:smart00226   1 ILFVCTGNICRSPMAEALFKAYVGDRVKIDSAGTGAwvgGGADPRAVKVLKEHGIDLSHHASQ-LTSSDFKNADLVLAMD 79

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    83 SD-AEKRCPITPP-QVARQHW----PFPDPAaatgssSEQLQVFREVRDAIKARIIDFAN 136
Cdd:smart00226  80 GShLRNICRLKPPsRAKVELFghyvDVDDPY------YGGIDGFERVYDELENALQEFLK 133
LMWPc pfam01451
Low molecular weight phosphotyrosine protein phosphatase;
6-135 3.68e-25

Low molecular weight phosphotyrosine protein phosphatase;


Pssm-ID: 460216  Cd Length: 142  Bit Score: 93.21  E-value: 3.68e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    6 IYFLCTGNSCRSQMAEGFGKQY-----LGDHYRVFSAGIE---KHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADL 77
Cdd:pfam01451   1 ILFVCTGNICRSPMAEAIFRRElekagLGDKVEVDSAGTGawpGNPADPRAVEVLKEHGIDLSGHYARQLSTEDFASFDL 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503492307   78 VVTLCSDAEKR-CPITPPQVARQ---------HWPFPDPAaatGSSSEQlqvFREVRDAIKARIIDFA 135
Cdd:pfam01451  81 ILAMDSEHKRDlCPLAPERYRAKvmllgeygeQLDIPDPY---YGSIDA---FEEVRDLIERRCRQLL 142
 
Name Accession Description Interval E-value
arsC_pI258_fam TIGR02691
arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent ...
 6-134 2.87e-84

arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent arsenate reductase of Staphylococcus aureaus plasmid pI258 and other mechanistically similar arsenate reductases. The mechanism involves an intramolecular disulfide bond cascade, and aligned members of this family have four absolutely conserved Cys residues. This group of arsenate reductases belongs to the low-molecular weight protein-tyrosine phosphatase family (pfam01451), as does a group of glutathione/glutaredoxin type arsenate reductases (TIGR02689). At least two other, non-homologous groups of arsenate reductases involved in arsenical resistance are also known. This enzyme reduces arsenate to arsenite, which may be more toxic but which is more easily exported. [Cellular processes, Detoxification]


Pssm-ID: 131738  Cd Length: 129  Bit Score: 242.77  E-value: 2.87e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLCSDA 85
Cdd:TIGR02691   1 IYFLCTGNSCRSQMAEGWGKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDLIDLDILNKADLVVTLCGDA 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 503492307   86 EKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDF 134
Cdd:TIGR02691  81 RDKCPATPPHVKREHWGLDDPARAEGTEEEKWAVFRRVRDEIKERVKDF 129
LMWP_ArsC cd16345
Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the ...
 6-134 3.49e-77

Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).


Pssm-ID: 319973  Cd Length: 132  Bit Score: 224.64  E-value: 3.49e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLCSDA 85
Cdd:cd16345    2 VLFLCTGNSARSQMAEALLRHLGGDRFEAYSAGSEPAGVNPLAIEVMKEIGIDISGQRSKSLDEFLGQEFDYVITVCDNA 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 503492307  86 EKRCPITPPQVARQHWPFPDPAAATGSSSEQLQVFREVRDAIKARIIDF 134
Cdd:cd16345   82 AEVCPVFPGAVKRLHWGFPDPAAAEGSEEEKLEAFRRVRDEIKERIEAL 130
PRK13530 PRK13530
arsenate reductase (thioredoxin);
1-135 8.79e-77

arsenate reductase (thioredoxin);


Pssm-ID: 237415  Cd Length: 133  Bit Score: 223.85  E-value: 8.79e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   1 MGQKTIYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVT 80
Cdd:PRK13530   1 MNKKTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMKEVGIDISNQTSDIIDNDILNNADLVVT 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 503492307  81 LCSDAEKRCPITPPQVARQHWPFPDPAAAtgssseQLQVFREVRDAIKARIIDFA 135
Cdd:PRK13530  81 LCSHADDVCPSTPPHVKRVHWGFDDPAGK------EWSEFQRVRDEIGERIKRFA 129
Wzb COG0394
Protein-tyrosine-phosphatase [Signal transduction mechanisms];
1-136 5.76e-52

Protein-tyrosine-phosphatase [Signal transduction mechanisms];


Pssm-ID: 440163  Cd Length: 137  Bit Score: 161.10  E-value: 5.76e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   1 MGQKTIYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKHG-VNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVV 79
Cdd:COG0394    1 MMPKRVLFVCTGNICRSPMAEALLRHLAGGRVEVDSAGTEPGGpVDPRAVAVLAERGIDLSGHRSRQLDEEDLPEFDLVI 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 503492307  80 TLCSDA-EKRCPITPPQV-ARQHWPFPDPAAATgssseqLQVFREVRDAIKARIIDFAN 136
Cdd:COG0394   81 TMCDSAaEELCPLFPGAAkLLLHWDVPDPYYGG------LEAFREVRDEIERRIEALLA 133
LMWP cd00115
Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group ...
 6-135 1.25e-35

Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group of small soluble enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). This family includes protein tyrosine phosphatases, arginine phosphatases and arsenate reductases.


Pssm-ID: 319970  Cd Length: 137  Bit Score: 119.90  E-value: 1.25e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEKH---GVNPMAVQVMAEAGVDIsSQTSKLIDPTILNHADLVVTLC 82
Cdd:cd00115    2 ILFICTGNICRSPMAEAIFKQLLGDEWKVDSAGTGAHhgeGADPRAVRVLKEVGIDI-SHRSDQIKSEHLDNYDLVLVMD 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503492307  83 SDAEKRCPITPPQ---------VARQHWPFPDPAAAtgssseQLQVFREVRDAIKARIIDFA 135
Cdd:cd00115   81 GSNLDKIPRIFPEargktwlphVKLEHGEIDDPYRG------DIEDFRRVRDELENASKRFA 136
LMWPc smart00226
Low molecular weight phosphatase family;
6-136 6.70e-31

Low molecular weight phosphatase family;


Pssm-ID: 197586  Cd Length: 134  Bit Score: 107.56  E-value: 6.70e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307     6 IYFLCTGNSCRSQMAEGFGKQYLGDHYRVFSAGIEK---HGVNPMAVQVMAEAGVDISSQTSKlIDPTILNHADLVVTLC 82
Cdd:smart00226   1 ILFVCTGNICRSPMAEALFKAYVGDRVKIDSAGTGAwvgGGADPRAVKVLKEHGIDLSHHASQ-LTSSDFKNADLVLAMD 79

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    83 SD-AEKRCPITPP-QVARQHW----PFPDPAaatgssSEQLQVFREVRDAIKARIIDFAN 136
Cdd:smart00226  80 GShLRNICRLKPPsRAKVELFghyvDVDDPY------YGGIDGFERVYDELENALQEFLK 133
LMWPc pfam01451
Low molecular weight phosphotyrosine protein phosphatase;
6-135 3.68e-25

Low molecular weight phosphotyrosine protein phosphatase;


Pssm-ID: 460216  Cd Length: 142  Bit Score: 93.21  E-value: 3.68e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307    6 IYFLCTGNSCRSQMAEGFGKQY-----LGDHYRVFSAGIE---KHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADL 77
Cdd:pfam01451   1 ILFVCTGNICRSPMAEAIFRRElekagLGDKVEVDSAGTGawpGNPADPRAVEVLKEHGIDLSGHYARQLSTEDFASFDL 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503492307   78 VVTLCSDAEKR-CPITPPQVARQ---------HWPFPDPAaatGSSSEQlqvFREVRDAIKARIIDFA 135
Cdd:pfam01451  81 ILAMDSEHKRDlCPLAPERYRAKvmllgeygeQLDIPDPY---YGSIDA---FEEVRDLIERRCRQLL 142
LMWPAP cd16344
low molecular weight protein arginine phosphatase; Low molecular weight protein arginine ...
 4-80 2.01e-23

low molecular weight protein arginine phosphatase; Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.


Pssm-ID: 319972  Cd Length: 142  Bit Score: 88.64  E-value: 2.01e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   4 KTIYFLCTGNSCRSQMAEGFGKQYLGD-HYRVFSAGI---EKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVV 79
Cdd:cd16344    1 MKILFVCTGNTCRSPMAEAILKKLLEElDVEVKSAGIfavDGSPASPNAVEVLKEKGIDLSGHRSQQLTEELLEWADLIL 80


                 .
gi 503492307  80 T 80
Cdd:cd16344   81 T 81
LMWPTP cd16343
Low molecular weight protein tyrosine phosphatase; Low molecular weight protein tyrosine ...
 4-90 1.47e-15

Low molecular weight protein tyrosine phosphatase; Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.


Pssm-ID: 319971  Cd Length: 147  Bit Score: 68.62  E-value: 1.47e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   4 KTIYFLCTGNSCRSQMAEGFGKQYL----GDHYRVFSAGI----EKHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHA 75
Cdd:cd16343    1 KKILFVCLGNICRSPMAEAVLRHLLpkagGDDVEVDSAGTsawhGGEPPDPRARAVLKEHGIDLSGHRARQLTAEDFDEF 80

                         90
                 ....*....|....*....
gi 503492307  76 DLVVTL----CSDAEKRCP 90
Cdd:cd16343   81 DLILAMdesnLRDLRRLAP 99
PRK10126 PRK10126
low molecular weight protein-tyrosine-phosphatase Wzb;
6-129 1.80e-05

low molecular weight protein-tyrosine-phosphatase Wzb;


Pssm-ID: 182256  Cd Length: 147  Bit Score: 41.82  E-value: 1.80e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   6 IYFLCTGNSCRSQMAEGFGKQYLGDhYRVFSAGIEK---HGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTLc 82
Cdd:PRK10126   5 ILVVCVGNICRSPTAERLLQRYHPE-LKVESAGLGAlvgKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTM- 82

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307  83 sdaEKR-----CPITPPQVAR----QHW----PFPDPaaatgssseqlqvFREVRDAIKA 129
Cdd:PRK10126  83 ---EKRhierlCEMAPEMRGKvmlfGHWdnecEIPDP-------------YRKSREAFEA 126
etp PRK11391
phosphotyrosine-protein phosphatase; Provisional
 5-106 2.57e-04

phosphotyrosine-protein phosphatase; Provisional


Pssm-ID: 138553  Cd Length: 144  Bit Score: 38.85  E-value: 2.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503492307   5 TIYFLCTGNSCRSQMAEGFGKQYLGDhYRVFSAGIE---KHGVNPMAVQVMAEAGVDISSQTSKLIDPTILNHADLVVTL 81
Cdd:PRK11391   4 SILVVCTGNICRSPIGERLLRKRLPG-VKVKSAGVHglvKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAM 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 503492307  82 CSDAEKRCPITPPQVARQHWPF---------PDP 106
Cdd:PRK11391  83 ESEHIAQVTAIAPEVRGKTMLFgqwleqkeiPDP 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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