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Conserved domains on  [gi|503472725|ref|WP_013707386|]
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ATP synthase F1 subunit gamma [Desulfobacca acetoxidans]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10000722)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 3.01e-138

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 439994  Cd Length: 288  Bit Score: 391.43  E-value: 3.01e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEERE-VKRVGLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:COG0224   80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGA--VSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTS 238
Cdd:COG0224  160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEweTRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 503472725 239 EHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:COG0224  240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 3.01e-138

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 391.43  E-value: 3.01e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEERE-VKRVGLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:COG0224   80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGA--VSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTS 238
Cdd:COG0224  160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEweTRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 503472725 239 EHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:COG0224  240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-289 3.38e-134

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 381.33  E-value: 3.38e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPRE-VKKALLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:PRK13423  80 VVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:PRK13423 160 YLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEH 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 503472725 241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALKG 289
Cdd:PRK13423 240 GARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALKG 288
ATP-synt pfam00231
ATP synthase;
3-286 2.12e-129

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 368.78  E-value: 2.12e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725    3 TLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQaEKVEKVELVLM 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLER-REVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   83 TADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKF-DFSNAQTVARDSVSPF 161
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLGDKpTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEE-GAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEeEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 503472725  241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEA 286
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 1.50e-114

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 331.08  E-value: 1.50e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   2 ATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQaEKVEKVELVL 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEK-REVKKVLLIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  82 MTADRGLCGSFNMNLINAADKFIKQkkAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSPF 161
Cdd:cd12151   80 ITSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDF 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPE--AAEEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSE 239
Cdd:cd12151  158 LNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASE 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 503472725 240 HAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGA 284
Cdd:cd12151  238 QAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 7.85e-105

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 306.53  E-value: 7.85e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725    2 ATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELVL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSRE-VKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   82 MTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSPF 161
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEG-AVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGfKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 503472725  241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 3.01e-138

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 391.43  E-value: 3.01e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEERE-VKRVGLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:COG0224   80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGA--VSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTS 238
Cdd:COG0224  160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEweTRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 503472725 239 EHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:COG0224  240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-289 3.38e-134

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 381.33  E-value: 3.38e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPRE-VKKALLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:PRK13423  80 VVTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:PRK13423 160 YLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEH 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 503472725 241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALKG 289
Cdd:PRK13423 240 GARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALKG 288
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-289 1.39e-129

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 369.84  E-value: 1.39e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEKVEKVELV 80
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREEIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVIDG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGAV--SQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTS 238
Cdd:PRK13424 161 YLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAgaSSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTSAS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 503472725 239 EHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALKG 289
Cdd:PRK13424 241 EHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALKG 291
ATP-synt pfam00231
ATP synthase;
3-286 2.12e-129

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 368.78  E-value: 2.12e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725    3 TLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQaEKVEKVELVLM 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLER-REVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   83 TADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKF-DFSNAQTVARDSVSPF 161
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLGDKpTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEE-GAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEeEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 503472725  241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEA 286
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 4.07e-127

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 363.28  E-value: 4.07e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEpEAHPFFQQAEkVEKVELV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASE-YDHPLLVERE-VKRVGYI 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:PRK05621  79 VVTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGaVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:PRK05621 159 YDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE-TSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 503472725 241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 1.50e-114

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 331.08  E-value: 1.50e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   2 ATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQaEKVEKVELVL 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEK-REVKKVLLIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  82 MTADRGLCGSFNMNLINAADKFIKQkkAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSPF 161
Cdd:cd12151   80 ITSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDF 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPE--AAEEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSE 239
Cdd:cd12151  158 LNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASE 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 503472725 240 HAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGA 284
Cdd:cd12151  238 QAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 7.85e-105

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 306.53  E-value: 7.85e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725    2 ATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELVL 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSRE-VKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   82 MTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSPF 161
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  162 TNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEG-AVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSEH 240
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGfKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 503472725  241 AARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-289 4.89e-87

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 261.67  E-value: 4.89e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEKVEKVELV 80
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRSEVNKVLVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGI---GVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDS 157
Cdd:PRK13425  81 LITSDRGLCGAFNTNIIKLAQKVIHEDYAALHakgGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAETA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 158 VSPFTNAEVQEVYLIYANFVNMVTqrPVLIP--LLPIIPEAAeEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLEN 235
Cdd:PRK13425 161 SGMYLRGEVDKVVVVYNEFKSVLA--PNLKSevLLPITPEKP-GAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLES 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 503472725 236 STSEHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALKG 289
Cdd:PRK13425 238 NAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQG 291
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-289 1.45e-84

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 255.49  E-value: 1.45e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEP--EAHPFFQQAEKVEKVE 78
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVGaaRVGPLLEKRPTVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  79 LVLMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSV 158
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 159 SPFTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGAVSqEYITEPAADQFLEYLLPRYINVMVYQGFLENSTS 238
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVV-DYTYEPSPEEVLRALLPRFVEVQLYQAVLESIAS 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 503472725 239 EHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALKG 289
Cdd:PRK14111 240 EHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALGS 290
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-288 8.03e-81

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 245.83  E-value: 8.03e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATL--RDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVE 78
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERRE-EKNVD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  79 LVLMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNK-FDFSNAQTVARDS 157
Cdd:PRK14110  80 LVIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVFRKeINFSVVKEVGGIL 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 158 VSPFTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPEAAEEGAVSQE-YITEPAADQFLEYLLPRYINVMVYQGFLENS 236
Cdd:PRK14110 160 ASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKLDELSvYNIEVSEEEFLDKLLQLYLNYQLYRALVESN 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 503472725 237 TSEHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEALK 288
Cdd:PRK14110 240 AAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-287 2.13e-68

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 214.03  E-value: 2.13e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEKVEKVELV 80
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEKIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVSP 160
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 161 FTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIP-EAAEEGAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLENSTSE 239
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLEPpTAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 503472725 240 HAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:PRK13427 241 QIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-287 3.14e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 206.17  E-value: 3.14e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASrVEPEAHPFFQQAEKVEKVELV 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLS-ADLDVESPFTVERPVKRVAIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGI-GVVLTTVGRKGRDYFRRRQADIRQTYVDVWNKFDFSNAQTVARDSVS 159
Cdd:PRK13426  80 VFSSNTSLCGGFNANIIKLLLQTIGEYRTLGQdNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 160 PFTNAEVQEVYLIYANFVNMVTQRPVLIPLLPI---IPEAAEE-GAVSQEYITEPAADQFLEYLLPRYINVMVYQGFLEN 235
Cdd:PRK13426 160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIdlsQEKNAEHaGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALLDS 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 503472725 236 STSEHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:PRK13426 240 NASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-287 6.65e-43

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 148.66  E-value: 6.65e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725   1 MATLRDIRQKIAAVKKTQQITKAMNMVSAAKLRGAQTRMEQFRPYAAAFKQMLASIASRVEPEAHPFFQQAEkVEKVELV 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRD-VKRVGYI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725  81 LMTADRGLCGSFNMNLINAADKFIKQKKAEGIGVVLTTVGRKGRDYFRRRQaDIRQTYVDVWNKFDFSNAQTVARDSVS- 159
Cdd:PRK13422  80 VTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLK-DVNIVATAHYNDKDKEGSIRAIGGAVKv 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 160 ---PFTNAEVQEVYLIYANFVNMVTQRPVLIPLLPIIPE-AAEEGAVSQE--------YITEPAADQFLEYLLPRYINVM 227
Cdd:PRK13422 159 mldKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIfSAEEIKANKEkatkghwdYIYERDIEEVLNALCIRYIEAQ 238

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 503472725 228 VYQGFLENSTSEHAARMTAMDNASSNCKDMITSLTMVMNKARQAAITKELMDIIGGAEAL 287
Cdd:PRK13422 239 VRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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