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Conserved domains on  [gi|503058085|ref|WP_013293061|]
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class I SAM-dependent methyltransferase [Gallionella capsiferriformans]

Protein Classification

class I SAM-dependent methyltransferase( domain architecture ID 10552639)

class I SAM-dependent methyltransferase that catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor

CATH:  2.20.25.110
EC:  2.1.1.-
Gene Ontology:  GO:1904047|GO:0008168
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Methyltransf_14 pfam08484
C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase ...
 251-404 1.44e-65

C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.


:

Pssm-ID: 430022  Cd Length: 160  Bit Score: 206.15  E-value: 1.44e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  251 KGGSVRLVAQLK-SARRSVDPSVGELIGEEHASGMRDAETYRKFAREIADAKHQLLSLLMGFKAAGKKIAGFGASHSTTT 329
Cdd:pfam08484   3 HGGSLRVYAARKeGGARPVSPAVAALLAEERAAGLDTLATYAGFAERVERVKDELLALLIDLKAEGKRVAGYGAAAKGNT 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503058085  330 LICHFGLAP-FIDYLVDDNPVKQGRYSPGFHLPVFSADKLIADQPDYVIMLGWQHRHSIMAKHP--LMNGTQWIIPLP 404
Cdd:pfam08484  83 LLNYCGIGPdLLDYVVDRNPAKQGRYTPGTHIPIVPPEKLREDRPDYVLILPWNLADEIMAQLAeyREWGGKFIVPVP 160
Methyltransf_13 pfam08421
Putative zinc binding domain; This domain is found at the N-terminus of bacterial ...
 12-70 5.43e-16

Putative zinc binding domain; This domain is found at the N-terminus of bacterial methyltransferases and contains four conserved cysteines suggesting a potential zinc binding domain.


:

Pssm-ID: 429987  Cd Length: 62  Bit Score: 71.84  E-value: 5.43e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503058085   12 CRLCGGNRIATVFKLADTPMEDQFVI-GPLEQP--FFPLELALCEDCGYLHLPHIVSPEASY 70
Cdd:pfam08421   1 CRLCGSPLLTPFLDLGRQPLANAFLTpEQLDQPepFYPLRLVVCEDCGLVQLEEVVPPEELF 62
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 106-244 2.41e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


:

Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 73.23  E-value: 2.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  106 VVDLGSNDGSMLASFKRQGMQVVGVEPaasiaaRANQAGLETVNDFFTAEVAANITGKYGKASIVTANYMYANIDDVTEF 185
Cdd:pfam13489  26 VLDFGCGTGIFLRLLRAQGFSVTGVDP------SPIAIERALLNVRFDQFDEQEAAVPAGKFDVIVAREVLEHVPDPPAL 99

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 503058085  186 TRSVARLLGPDGIFVVET--GYHPEQMKIRMFDY--IYHEHFSYFTVEVLQHLFAASGLELIH 244
Cdd:pfam13489 100 LRQIAALLKPGGLLLLSTplASDEADRLLLEWPYlrPRNGHISLFSARSLKRLLEEAGFEVVS 162
 
Name Accession Description Interval E-value
Methyltransf_14 pfam08484
C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase ...
 251-404 1.44e-65

C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.


Pssm-ID: 430022  Cd Length: 160  Bit Score: 206.15  E-value: 1.44e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  251 KGGSVRLVAQLK-SARRSVDPSVGELIGEEHASGMRDAETYRKFAREIADAKHQLLSLLMGFKAAGKKIAGFGASHSTTT 329
Cdd:pfam08484   3 HGGSLRVYAARKeGGARPVSPAVAALLAEERAAGLDTLATYAGFAERVERVKDELLALLIDLKAEGKRVAGYGAAAKGNT 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503058085  330 LICHFGLAP-FIDYLVDDNPVKQGRYSPGFHLPVFSADKLIADQPDYVIMLGWQHRHSIMAKHP--LMNGTQWIIPLP 404
Cdd:pfam08484  83 LLNYCGIGPdLLDYVVDRNPAKQGRYTPGTHIPIVPPEKLREDRPDYVLILPWNLADEIMAQLAeyREWGGKFIVPVP 160
Methyltransf_13 pfam08421
Putative zinc binding domain; This domain is found at the N-terminus of bacterial ...
 12-70 5.43e-16

Putative zinc binding domain; This domain is found at the N-terminus of bacterial methyltransferases and contains four conserved cysteines suggesting a potential zinc binding domain.


Pssm-ID: 429987  Cd Length: 62  Bit Score: 71.84  E-value: 5.43e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503058085   12 CRLCGGNRIATVFKLADTPMEDQFVI-GPLEQP--FFPLELALCEDCGYLHLPHIVSPEASY 70
Cdd:pfam08421   1 CRLCGSPLLTPFLDLGRQPLANAFLTpEQLDQPepFYPLRLVVCEDCGLVQLEEVVPPEELF 62
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 106-244 2.41e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 73.23  E-value: 2.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  106 VVDLGSNDGSMLASFKRQGMQVVGVEPaasiaaRANQAGLETVNDFFTAEVAANITGKYGKASIVTANYMYANIDDVTEF 185
Cdd:pfam13489  26 VLDFGCGTGIFLRLLRAQGFSVTGVDP------SPIAIERALLNVRFDQFDEQEAAVPAGKFDVIVAREVLEHVPDPPAL 99

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 503058085  186 TRSVARLLGPDGIFVVET--GYHPEQMKIRMFDY--IYHEHFSYFTVEVLQHLFAASGLELIH 244
Cdd:pfam13489 100 LRQIAALLKPGGLLLLSTplASDEADRLLLEWPYlrPRNGHISLFSARSLKRLLEEAGFEVVS 162
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
66-247 4.93e-13

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 66.95  E-value: 4.93e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  66 PEASYTDY--VYVSSLTVGLthHYD---QYAQKIINDWAVPASALVVDLGSNDGSMLASFKRQGMQVVGVEPAASIAARA 140
Cdd:COG4976    7 VEALFDQYadSYDAALVEDL--GYEapaLLAEELLARLPPGPFGRVLDLGCGTGLLGEALRPRGYRLTGVDLSEEMLAKA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 141 NQAGLETvnDFFTAEVAAnITGKYGKASIVTANYMYANIDDVTEFTRSVARLLGPDGIFVVETGYHPEqmkirmfdyiyh 220
Cdd:COG4976   85 REKGVYD--RLLVADLAD-LAEPDGRFDLIVAADVLTYLGDLAAVFAGVARALKPGGLFIFSVEDADG------------ 149

                        170       180       190
                 ....*....|....*....|....*....|.
gi 503058085 221 EHFSYFTVEVLQHLFAASGLE----LIHAEK 247
Cdd:COG4976  150 SGRYAHSLDYVRDLLAAAGFEvpglLVVARK 180
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 106-202 7.01e-04

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 38.95  E-value: 7.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 106 VVDLGSNDG-SMLASFKRQGMQVVGVE---PAASIAARANQAGLETVNDFFTAEVAANITGKYGKASIVTANYMY-ANID 180
Cdd:cd02440    2 VLDLGCGTGaLALALASGPGARVTGVDispVALELARKAAAALLADNVEVLKGDAEELPPEADESFDVIISDPPLhHLVE 81

                         90       100
                 ....*....|....*....|..
gi 503058085 181 DVTEFTRSVARLLGPDGIFVVE 202
Cdd:cd02440   82 DLARFLEEARRLLKPGGVLVLT 103
 
Name Accession Description Interval E-value
Methyltransf_14 pfam08484
C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase ...
 251-404 1.44e-65

C-methyltransferase C-terminal domain; This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.


Pssm-ID: 430022  Cd Length: 160  Bit Score: 206.15  E-value: 1.44e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  251 KGGSVRLVAQLK-SARRSVDPSVGELIGEEHASGMRDAETYRKFAREIADAKHQLLSLLMGFKAAGKKIAGFGASHSTTT 329
Cdd:pfam08484   3 HGGSLRVYAARKeGGARPVSPAVAALLAEERAAGLDTLATYAGFAERVERVKDELLALLIDLKAEGKRVAGYGAAAKGNT 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503058085  330 LICHFGLAP-FIDYLVDDNPVKQGRYSPGFHLPVFSADKLIADQPDYVIMLGWQHRHSIMAKHP--LMNGTQWIIPLP 404
Cdd:pfam08484  83 LLNYCGIGPdLLDYVVDRNPAKQGRYTPGTHIPIVPPEKLREDRPDYVLILPWNLADEIMAQLAeyREWGGKFIVPVP 160
Methyltransf_13 pfam08421
Putative zinc binding domain; This domain is found at the N-terminus of bacterial ...
 12-70 5.43e-16

Putative zinc binding domain; This domain is found at the N-terminus of bacterial methyltransferases and contains four conserved cysteines suggesting a potential zinc binding domain.


Pssm-ID: 429987  Cd Length: 62  Bit Score: 71.84  E-value: 5.43e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503058085   12 CRLCGGNRIATVFKLADTPMEDQFVI-GPLEQP--FFPLELALCEDCGYLHLPHIVSPEASY 70
Cdd:pfam08421   1 CRLCGSPLLTPFLDLGRQPLANAFLTpEQLDQPepFYPLRLVVCEDCGLVQLEEVVPPEELF 62
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 106-244 2.41e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 73.23  E-value: 2.41e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  106 VVDLGSNDGSMLASFKRQGMQVVGVEPaasiaaRANQAGLETVNDFFTAEVAANITGKYGKASIVTANYMYANIDDVTEF 185
Cdd:pfam13489  26 VLDFGCGTGIFLRLLRAQGFSVTGVDP------SPIAIERALLNVRFDQFDEQEAAVPAGKFDVIVAREVLEHVPDPPAL 99

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 503058085  186 TRSVARLLGPDGIFVVET--GYHPEQMKIRMFDY--IYHEHFSYFTVEVLQHLFAASGLELIH 244
Cdd:pfam13489 100 LRQIAALLKPGGLLLLSTplASDEADRLLLEWPYlrPRNGHISLFSARSLKRLLEEAGFEVVS 162
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
66-247 4.93e-13

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 66.95  E-value: 4.93e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  66 PEASYTDY--VYVSSLTVGLthHYD---QYAQKIINDWAVPASALVVDLGSNDGSMLASFKRQGMQVVGVEPAASIAARA 140
Cdd:COG4976    7 VEALFDQYadSYDAALVEDL--GYEapaLLAEELLARLPPGPFGRVLDLGCGTGLLGEALRPRGYRLTGVDLSEEMLAKA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 141 NQAGLETvnDFFTAEVAAnITGKYGKASIVTANYMYANIDDVTEFTRSVARLLGPDGIFVVETGYHPEqmkirmfdyiyh 220
Cdd:COG4976   85 REKGVYD--RLLVADLAD-LAEPDGRFDLIVAADVLTYLGDLAAVFAGVARALKPGGLFIFSVEDADG------------ 149

                        170       180       190
                 ....*....|....*....|....*....|.
gi 503058085 221 EHFSYFTVEVLQHLFAASGLE----LIHAEK 247
Cdd:COG4976  150 SGRYAHSLDYVRDLLAAAGFEvpglLVVARK 180
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 87-203 5.44e-13

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 65.42  E-value: 5.44e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  87 YDQYAQKIINDWAvPASALVVDLGSNDGSMLASFKRQGMQVVGVEPAASIAARANQAGLETVNDFFTAEVaANITGKYGK 166
Cdd:COG2227   10 WDRRLAALLARLL-PAGGRVLDVGCGTGRLALALARRGADVTGVDISPEALEIARERAAELNVDFVQGDL-EDLPLEDGS 87

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 503058085 167 ASIVTANYMYANIDDVTEFTRSVARLLGPDGIFVVET 203
Cdd:COG2227   88 FDLVICSEVLEHLPDPAALLRELARLLKPGGLLLLST 124
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 85-213 2.76e-08

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 52.30  E-value: 2.76e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  85 HHYDQYaQKIINDWAVPASALVVDLGSNDGSMLASFKRQGMQVVGVEPAASIAARANQ-AGLETVNDFFTAEVAANITGK 163
Cdd:COG2226    6 ARYDGR-EALLAALGLRPGARVLDLGCGTGRLALALAERGARVTGVDISPEMLELARErAAEAGLNVEFVVGDAEDLPFP 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 503058085 164 YGKASIVTANYMYANIDDVTEFTRSVARLLGPDGIFVVETGYHPEQMKIR 213
Cdd:COG2226   85 DGSFDLVISSFVLHHLPDPERALAEIARVLKPGGRLVVVDFSPPDLAELE 134
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 101-202 5.84e-06

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 46.83  E-value: 5.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 101 PASALVVDLGSNDGSMLASF-KRQGMQVVGVEPAAS-IA---ARANQAGLETVnDFFTAEVAANITGKYGKASIVTANYM 175
Cdd:COG0500   25 PKGGRVLDLGCGTGRNLLALaARFGGRVIGIDLSPEaIAlarARAAKAGLGNV-EFLVADLAELDPLPAESFDLVVAFGV 103

                         90       100
                 ....*....|....*....|....*....
gi 503058085 176 Y--ANIDDVTEFTRSVARLLGPDGIFVVE 202
Cdd:COG0500  104 LhhLPPEEREALLRELARALKPGGVLLLS 132
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 107-201 1.57e-05

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 43.04  E-value: 1.57e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  107 VDLGSNDGSMLASFKRQGMQVVGVEPAASIAARANQAGLETVNDFFTAEvAANITGKYGKASIVTANYMYANIDDVTEFT 186
Cdd:pfam08241   1 LDVGCGTGLLTELLARLGARVTGVDISPEMLELAREKAPREGLTFVVGD-AEDLPFPDNSFDLVLSSEVLHHVEDPERAL 79

                          90
                  ....*....|....*
gi 503058085  187 RSVARLLGPDGIFVV 201
Cdd:pfam08241  80 REIARVLKPGGILII 94
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 106-204 2.51e-04

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 41.07  E-value: 2.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 106 VVDLGSNDGSMLASF-KRQGMQVVGV----EPAASIAARANQAGLETVNDFFTAEVAA-NITGKYGKASIVTAnYMYANI 179
Cdd:COG2230   55 VLDIGCGWGGLALYLaRRYGVRVTGVtlspEQLEYARERAAEAGLADRVEVRLADYRDlPADGQFDAIVSIGM-FEHVGP 133

                         90       100
                 ....*....|....*....|....*
gi 503058085 180 DDVTEFTRSVARLLGPDGIFVVETG 204
Cdd:COG2230  134 ENYPAYFAKVARLLKPGGRLLLHTP 158
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 107-199 4.54e-04

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 39.27  E-value: 4.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  107 VDLGSNDGSMLASFKRQ--GMQVVGVE--PAASIAARANQAGLE-TVNDFFTAEVAANITGKYGKASIVTANYMYANIDD 181
Cdd:pfam08242   1 LEIGCGTGTLLRALLEAlpGLEYTGLDisPAALEAARERLAALGlLNAVRVELFQLDLGELDPGSFDVVVASNVLHHLAD 80

                          90
                  ....*....|....*...
gi 503058085  182 VTEFTRSVARLLGPDGIF 199
Cdd:pfam08242  81 PRAVLRNIRRLLKPGGVL 98
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 106-202 7.01e-04

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 38.95  E-value: 7.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085 106 VVDLGSNDG-SMLASFKRQGMQVVGVE---PAASIAARANQAGLETVNDFFTAEVAANITGKYGKASIVTANYMY-ANID 180
Cdd:cd02440    2 VLDLGCGTGaLALALASGPGARVTGVDispVALELARKAAAALLADNVEVLKGDAEELPPEADESFDVIISDPPLhHLVE 81

                         90       100
                 ....*....|....*....|..
gi 503058085 181 DVTEFTRSVARLLGPDGIFVVE 202
Cdd:cd02440   82 DLARFLEEARRLLKPGGVLVLT 103
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 106-197 1.27e-03

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 37.93  E-value: 1.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503058085  106 VVDLGSNDGSMLASF-KRQGMQVVGVEPAASIAARANQ-AGLETVNDFFTAEVAANITGKYGKASIVTANYM--YANIDD 181
Cdd:pfam13649   1 VLDLGCGTGRLTLALaRRGGARVTGVDLSPEMLERARErAAEAGLNVEFVQGDAEDLPFPDGSFDLVVSSGVlhHLPDPD 80

                          90
                  ....*....|....*.
gi 503058085  182 VTEFTRSVARLLGPDG 197
Cdd:pfam13649  81 LEAALREIARVLKPGG 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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