NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|503007697|ref|WP_013242673|]
View 

DUF3263 domain-containing protein [Corynebacterium pseudotuberculosis]

Protein Classification

DUF3263 domain-containing protein( domain architecture ID 10569413)

uncharacterized DUF3263 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3263 pfam11662
Protein of unknown function (DUF3263); This family of proteins with unknown function appears ...
 17-87 2.80e-25

Protein of unknown function (DUF3263); This family of proteins with unknown function appears to be restricted to Actinobacteria.


:

Pssm-ID: 431988  Cd Length: 74  Bit Score: 89.55  E-value: 2.80e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 503007697  17 EKQLALLAFEERAPHSLGAKEEAIREELGISPVRYFQSLNRAIDVPEVMSEYPVLTARLRRIRDQRADRRA 87
Cdd:pfam11662  4 DRDRAILAFERQWWRHAGAKEQAIRERFGLSPTRYYQLLNALIDDPAALAADPVLVKRLRRLRAARRRARS 74
 
Name Accession Description Interval E-value
DUF3263 pfam11662
Protein of unknown function (DUF3263); This family of proteins with unknown function appears ...
 17-87 2.80e-25

Protein of unknown function (DUF3263); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431988  Cd Length: 74  Bit Score: 89.55  E-value: 2.80e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 503007697  17 EKQLALLAFEERAPHSLGAKEEAIREELGISPVRYFQSLNRAIDVPEVMSEYPVLTARLRRIRDQRADRRA 87
Cdd:pfam11662  4 DRDRAILAFERQWWRHAGAKEQAIRERFGLSPTRYYQLLNALIDDPAALAADPVLVKRLRRLRAARRRARS 74
 
Name Accession Description Interval E-value
DUF3263 pfam11662
Protein of unknown function (DUF3263); This family of proteins with unknown function appears ...
 17-87 2.80e-25

Protein of unknown function (DUF3263); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431988  Cd Length: 74  Bit Score: 89.55  E-value: 2.80e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 503007697  17 EKQLALLAFEERAPHSLGAKEEAIREELGISPVRYFQSLNRAIDVPEVMSEYPVLTARLRRIRDQRADRRA 87
Cdd:pfam11662  4 DRDRAILAFERQWWRHAGAKEQAIRERFGLSPTRYYQLLNALIDDPAALAADPVLVKRLRRLRAARRRARS 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH