|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
7-645 |
2.34e-95 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 307.55 E-value: 2.34e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 7 LAIGLSLLAIGANAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSgLTASFDFSEND-- 84
Cdd:COG4771 4 ASLLLLLALAAQAADALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALR-LLPGVSVTRSGgr 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 85 -MSSRLQMNGLGNAYVLILIDGRRLHGDN-GGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREQGvM 162
Cdd:COG4771 83 gGSSGISIRGLGGDRVLVLIDGVPVNNPAlGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDEL-E 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 163 VENTTRVGTYGDIRQHNGVALNY--GKLSSYTNFQLQHSDGWQNTaeeaiqqteyhiTDSRNKTVNRHTNWQIAERLTYQ 240
Cdd:COG4771 162 GSVSLGYGSNGNGTYSGSLSLGGpgDKLSFLLSGSYRDRDGYLDY------------RNGGFVGNSGYERYNLNAKLGYR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 241 LTPAIELYADGSiYWKRIYRPCGHHPGVDVKTWDLQYNNASASVGGKWKLNktdvitldadwkkhaYNYAYTDT-TLTDG 319
Cdd:COG4771 230 LSDNHRLSLSGG-YSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSLR---------------YNGDLGDNlDLSLY 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 320 YVNGRFTNYFPYFPGDKELQSDQRLTNISLKGIFALPY--EQQLSAGLEYRYDWLKAPMRVAGGKATDNTEALYVQDEWA 397
Cdd:COG4771 294 YSRTDRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYPLggNHTLTLGAEYRYDDLDSSSFLGGADASRDTYGLFAQDEWK 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 398 LLDPLHITGGLRLTRNEGFG----TRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYikNMNGVYLYLGNEDLK 472
Cdd:COG4771 374 LTDKLTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDnLTLRASYGRGFRAPSLAELYGSG--TGTPGRYVLGNPDLK 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 473 AQTSNYFGASVEYTIGH--LTLTLAPYINKVDRMITLVTIPTkqapgelitkyDPIRVRQYQNMEDAKTYGVDFTVRYQ- 549
Cdd:COG4771 452 PETSDNYELGLEYRLGNggLSLSLTGFYTDIKDLIVLVPVGP-----------GPGDVLQYENVGKARTYGLELELKYRl 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 550 GKHFTAGGSYSYLDTEANQYDTENDvmqkvtIDGMAHHKANVYATWnhQFSKKYQLGVGIY---GRLSSKRYYQIDGDGK 626
Cdd:COG4771 521 GKGLTLTASYTYLDSKIDDGDTGEP------LPNVPPHKANLGLDY--RLPKWWLLLLLTRyygGRYVTPPSGRLEGYTP 592
|
650
....*....|....*....
gi 502828280 627 GYQLWRLSTNHQIGRLLKV 645
Cdd:COG4771 593 GYTLLDLRASYKLTKNLTL 611
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
51-682 |
4.19e-70 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 240.82 E-value: 4.19e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 51 TEVISRRQLQQYAGKSIEDIL---SGLTASFDFSENdmSSRLQMNGLGNAYVLILIDGRRLHGDNGGEN-DLSLIDPHNI 126
Cdd:cd01347 2 VSVITAEDIEKQPATSLADLLrriPGVSVTRGGGGG--GSTISIRGFGPDRTLVLVDGLPLASSNYGRGvDLNTIPPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 127 EKIEIVKGASSALYGSDAIAGVINIITRKH-REQGVMVenTTRVGTYGDIRQHNGVALNYGKLSSYTNFqlqhsDGWQNT 205
Cdd:cd01347 80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPtDEFGGSV--TAGYGSDNSGSSGGGGFDVSGALADDGAF-----GARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 206 aeeAIQQTEYHITDSRNKTVNRHTNWQIAERLTYQLTPAIELYADGSIYWKRI------YRPCGHHPGVDVKTWDLQYNN 279
Cdd:cd01347 153 ---AYRDGDGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDAdgpggtLPANGTGSSLGGGPSSNTNGD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 280 ASASVGGKWKLNKTDVITLDADWKKHAYN----YAYTDTTLTDGYVNGRFTNYFPYFPGDK---ELQSDQRLTNISLKGI 352
Cdd:cd01347 230 RDWDYRDRYRKRASLGLEHDLNDTGWTLRanlsYSYTDNDGDPLILNGGNNAAGGDLGRSGyssERDTTQLGFDAGLNAP 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 353 FA-LPYEQQLSAGLEYRYDwlkapmrvaggKATDNTEALYVQDEWALLDPLHITGGLRLTRNEG--------------FG 417
Cdd:cd01347 310 FGtGPVAHTLTLGVEYRRE-----------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYDQdskdtiaggttakkSY 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 418 TRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYIKNMNGVYlylGNEDLKAQTSNYFGASVEYTIGH-LTLTLA 495
Cdd:cd01347 379 SHWSPSLGLVYKLTDgLSLYASYSQGFRAPSLGELYGGGSHGGTAAV---GNPNLKPEKSKQYELGLKYDPGDgLTLSAA 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 496 PYINKVDRMITLVTIPTKQAPgelitkydpirVRQYQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEANQYDTEND 574
Cdd:cd01347 456 LFRIDIKNEIVSTPTNTGLGL-----------VTVYVNGGKARIRGVELEASYDlTDGLGLTGSYTYTDTEVKRTDGATT 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 575 vmqKVTIDGMAHHKANVYATWNHQFSKkyqLGVGIYGRLSSKRYYQIDGDG-----KGYQLWRLSTNHQIGRLLKVDAGI 649
Cdd:cd01347 525 ---GNRLPGIPKHTANLGLDYELPDEG---LTAGGGVRYRGKQYADTANGNntvkvPGYTLVDLSASYQFTKNLTLRLGV 598
|
650 660 670
....*....|....*....|....*....|....*..
gi 502828280 650 DNIFD----FVDRTPHGLHLGTTSPGRTIYASLTLRF 682
Cdd:cd01347 599 NNLFDkdyyTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
30-682 |
5.36e-50 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 185.67 E-value: 5.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 30 LQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDIL---SGLTASFDFSENDMSsrLQMNGLGNAYVLILIDGR 106
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALntvPGVDVTGGGRPPGQS--INIRGLQDNRVLVVVDGA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 107 RLHGDNGGENDLSL-IDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREqgvMVENTTRVGtyGDIRQHNGVALNY 185
Cdd:TIGR01785 79 RQNYQRGGAHNGSLfVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAD---LLRPGQLFG--GLAKLSYGSNNNS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 186 GKLSSYtnFQLQHSDGWQ-------NTAEEAIQQTEYHITDSRNKTVNRhtnwqiAERLTYQLTPAIEL-YADGSIYWKr 257
Cdd:TIGR01785 154 FGGSVA--VAGRLDDNLDalvaatyRDGGNYRNGNKEEATNSAYVQKNL------LAKLGWQLDDAQRLeFSYFTTEGS- 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 258 iyrpcghhpgvdvktWDLQYNNA---SASVGGKWKLNKTDVITLDadwkkhaYNYAYTDTTLTDGYVNGRFTNYF----- 329
Cdd:TIGR01785 225 ---------------LDEAQNSGpgtEYVLGSSSTLLASSTRDRS-------ATLTYNWTPEDNPWLDATASLYYnrten 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 330 -PYFPGDKELQSDQrlTNISLKGI-------FALPYEQQLSAGLEYRYDwlKAP-----------MRVAGGKATDNTEAL 390
Cdd:TIGR01785 283 dNDRSARGVGREEG--YQYTTYGAtlqntsrFDVASWSTLTYGVDWMKD--KRRtesfdpnsvttIVPNPPSAKEYFFGL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 391 YVQDEWALLD-PLHITGGLRLTRNE-----GFGT--------RLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQY 455
Cdd:TIGR01785 359 FLQDNIPLLDdRLTLSAGLRYDHYKlspktTADTeavdrsysRWSPSLGLSYKPVDwLTLYASYSQGFRAPSIDELYGTG 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 456 I-KNMNGVYLYLGNEDLKAQTS-------NYFGASVEYTIGHLTLTLAPYINKVDRMITLVTIPTKQAPGELITKYdpir 527
Cdd:TIGR01785 439 DhPGTPGGYTFAPNPNLKPETSktwelgaNLSFDNLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMNNIT---- 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 528 vrQYQNMEDAKTYGVDFTVRYQGKHFTAGGSYSYL---DTEANQYDTENDVMQKVTIDGMAHHKANVYATWNHQFSKKYQ 604
Cdd:TIGR01785 515 --QYVNIDGARIRGIEASASYDAGLWATGLSYGYTigkDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQS 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 605 lGVGIYGRLSSkryyQIDGDGKGYQLWRLSTNHQIGRL--LKVDAGIDNIFDFVDRTPHGLHLGTtsPGRTIYASLTLRF 682
Cdd:TIGR01785 593 -ESPTTEDVAA----NGLLTTPGYTVVDLYATYQPNAVkgLTVRFGVNNLTDRKYTPAQSVPGAG--PGRNFKGSVKYQF 665
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
10-682 |
8.98e-48 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 179.31 E-value: 8.98e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 10 GLSLLAIGAnAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSGLTASFDFSENDMSSRL 89
Cdd:PRK10064 11 GLCASAISC-AWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 90 QMNGLGNAYVLILIDGRRLHGDN----GGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREQ--GVMV 163
Cdd:PRK10064 90 SIRGLDSSYTLILIDGKRVNSRNavfrHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKwhGTVT 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 164 ENTTrvgtygdIRQHNGVALNYgKLSSYTNFQLqhsdgwqntAEEAIQQTEYHITDSRNKtvnrhTNWQIAERLTYQLTP 243
Cdd:PRK10064 170 VDTT-------IQEHRDRGDTY-NGQFFTSGPL---------IDGVLGMKAYGSLAKREK-----DDPQNSTTTDTGETP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 244 AIELYA--DGSIYWKriYRPCGHHP-----GVDVKTWD--------LQYNNASASVGGKWKLNKTDVitldadwkkhayn 308
Cdd:PRK10064 228 RIEGFTsrDGNVEFA--WTPNQNHDftagyGFDRQDRDsdsldknrLERQNYSLSHNGRWDYGNSEL------------- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 309 YAYTDttltdgyvngRFTNyfpYFPGDKELQSDQrltNISLKGIFALP---YEQQLSAGLEYRYDWLKAPMRVAGGKATD 385
Cdd:PRK10064 293 KYYGE----------KVEN---KNPGNSSPITSE---SNSIDGKYTLPltaINQFLTFGGEWRHDKLSDAVNLTGGTSSK 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 386 NT---EALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYIKNMNG 461
Cdd:PRK10064 357 TSasqYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDtVTVKGGWATAFKAPSLLQLSPDWTSNSCR 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 462 VYLYL-GNEDLKAQTSNYFGASVEYT-----IGHLTLTLAPYINKVDRMITLV-TIPTKQAPG-------ELITKYDPIR 527
Cdd:PRK10064 437 GACKIvGSPDLKPETSESWELGLYYMgeegwLEGVESSVTVFRNDVDDRISISrTSDVNAAPGyqnfvgfETNGRGRRVP 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 528 VRQYQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEanqyDTENDvmQKVTIDGMAHHKANVYATWNHQFSKKYQLG 606
Cdd:PRK10064 517 VFRYYNVNKARIQGVETELKIPfNDEWKLSLNYTYNDGR----DVSNG--ENKPLSDLPFHTANGTLDWKPLALEDWSFY 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 607 V-GIYgrLSSKRyyQIDGDGK---GYQLWRLSTNHQIGRLLKVDAGIDNIFDF-VDRTPHGLhlgtTSPGRTIYASLTLR 681
Cdd:PRK10064 591 VsGNY--TGQKR--ADSATAKtpgGYTIWNTGAAWQVTKDVKLRAGVLNLGDKdLSRDDYSY----NEDGRRYFMAVDYR 662
|
.
gi 502828280 682 F 682
Cdd:PRK10064 663 F 663
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
277-681 |
3.53e-36 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 142.60 E-value: 3.53e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 277 YNNASASVGGKWKLNKTDVITLDADwkkhaYNYAYTDTTLTDGYVNGRFTNYFPYFPGDKELQSDQRLTNISLKGIFALP 356
Cdd:pfam00593 58 TDRKRLSLGYDYDLGDGLSWLSTLR-----LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHD 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 357 Y---EQQLSAGLEYRYDWLK--------APMRVAGGKATDNTEALYVQDEWALLDPLHITGGLRLTRNEGFGT------- 418
Cdd:pfam00593 133 LllgVELRTAGLDYRRLDDDaydpydpaNPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDdgngggd 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 419 -------RLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELhYQYIKNMNGVYLYLGNEDLKAQTSNYFGASVEYTIGHL 490
Cdd:pfam00593 213 nfsrsysAFSPRLGLVYKPTDnLSLYASYSRGFRAPSLGEL-YGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 491 TLTLAPYINKVDRMITLVTIPTkqapgelitkYDPIRVRQYQNMEDAKTYGVDFTVRYQG-KHFTAGGSYSYLDTEANQY 569
Cdd:pfam00593 292 SLSLALFYIDIKNLITSDPDGP----------GLGGTVYTYTNVGKARIRGVELELSGRLwGLGLSGGGYTYTDADDDAD 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 570 DTENDvmqkVTIDGMAHHKANVYATWNHQfSKKYQLGVGI-YGRLSSKRYYQIDGDGK--GYQLWRLSTNHQIGRLLKVD 646
Cdd:pfam00593 362 ADDTG----NPLPNVPRHTANLGLTYDFP-LGGWGARLGArYVGSGERRYGDAANTFKtpGYTLVDLSAGYRLNKNLTLR 436
|
410 420 430
....*....|....*....|....*....|....*....
gi 502828280 647 AGIDNIFDFVDRTPHGLHLGTTS----PGRTIYASLTLR 681
Cdd:pfam00593 437 LGVNNLFDKYYKRYYSSGGGNLGgypgPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
7-645 |
2.34e-95 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 307.55 E-value: 2.34e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 7 LAIGLSLLAIGANAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSgLTASFDFSEND-- 84
Cdd:COG4771 4 ASLLLLLALAAQAADALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALR-LLPGVSVTRSGgr 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 85 -MSSRLQMNGLGNAYVLILIDGRRLHGDN-GGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREQGvM 162
Cdd:COG4771 83 gGSSGISIRGLGGDRVLVLIDGVPVNNPAlGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDEL-E 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 163 VENTTRVGTYGDIRQHNGVALNY--GKLSSYTNFQLQHSDGWQNTaeeaiqqteyhiTDSRNKTVNRHTNWQIAERLTYQ 240
Cdd:COG4771 162 GSVSLGYGSNGNGTYSGSLSLGGpgDKLSFLLSGSYRDRDGYLDY------------RNGGFVGNSGYERYNLNAKLGYR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 241 LTPAIELYADGSiYWKRIYRPCGHHPGVDVKTWDLQYNNASASVGGKWKLNktdvitldadwkkhaYNYAYTDT-TLTDG 319
Cdd:COG4771 230 LSDNHRLSLSGG-YSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSLR---------------YNGDLGDNlDLSLY 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 320 YVNGRFTNYFPYFPGDKELQSDQRLTNISLKGIFALPY--EQQLSAGLEYRYDWLKAPMRVAGGKATDNTEALYVQDEWA 397
Cdd:COG4771 294 YSRTDRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYPLggNHTLTLGAEYRYDDLDSSSFLGGADASRDTYGLFAQDEWK 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 398 LLDPLHITGGLRLTRNEGFG----TRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYikNMNGVYLYLGNEDLK 472
Cdd:COG4771 374 LTDKLTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDnLTLRASYGRGFRAPSLAELYGSG--TGTPGRYVLGNPDLK 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 473 AQTSNYFGASVEYTIGH--LTLTLAPYINKVDRMITLVTIPTkqapgelitkyDPIRVRQYQNMEDAKTYGVDFTVRYQ- 549
Cdd:COG4771 452 PETSDNYELGLEYRLGNggLSLSLTGFYTDIKDLIVLVPVGP-----------GPGDVLQYENVGKARTYGLELELKYRl 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 550 GKHFTAGGSYSYLDTEANQYDTENDvmqkvtIDGMAHHKANVYATWnhQFSKKYQLGVGIY---GRLSSKRYYQIDGDGK 626
Cdd:COG4771 521 GKGLTLTASYTYLDSKIDDGDTGEP------LPNVPPHKANLGLDY--RLPKWWLLLLLTRyygGRYVTPPSGRLEGYTP 592
|
650
....*....|....*....
gi 502828280 627 GYQLWRLSTNHQIGRLLKV 645
Cdd:COG4771 593 GYTLLDLRASYKLTKNLTL 611
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
30-654 |
1.98e-75 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 255.52 E-value: 1.98e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 30 LQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILsGLTASFDFSENDM-SSRLQMNGLGNAY--VLILIDGR 106
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLL-RRVPGVSVTSAGGgAGQISIRGFGGGGnrVLVLVDGV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 107 RLHGDNGGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHR-EQGVMVEntTRVGTYGDIRQHNGVALNY 185
Cdd:COG1629 80 PLNDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKdGKGGEVS--ASYGSYGTYRASLSLSGGN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 186 GKLSSYTNFQLQHSDGWQNTaeeaiqqteyhiTDSRNKTVNRHTNWQIAERLTYQLT---PAIELYADGSIYWKRIYRPC 262
Cdd:COG1629 158 GKLAYRLSASYRDSDGYRDN------------SDSDRYNLRAKLGYQLGDDTRLTLSasySDSDQDSPGYLTLAALRPRG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 263 GHHPGVDVKTWDLQ-YNNASASVGGKWK-LNKTDVITLDADWKKHAYNYAYTDTTLTDGYVNGRFTNYfpyfpgdkelQS 340
Cdd:COG1629 226 AMDDGTNPYSNDTDdNTRDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDF----------DN 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 341 DQRLTNISLKGIFALPYEQQLSAGLEYRYDWLKAPMRVAGG--------------KATDNTEALYVQDEWALLDPLHITG 406
Cdd:COG1629 296 RTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLgsgslptltsgaddDGTTTSLALYAQDTYKLTDKLTLTA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 407 GLRLTRNEGFG----------------TRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYIKNMNgvylyLGNE 469
Cdd:COG1629 376 GLRYDYVSYDVddtvtgtdsasgsrsySAFSPSLGLTYQLSPnLSLYASYSRGFRAPTFGELYANGTDPYS-----VGNP 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 470 DLKAQTSNYF--GASVEYTIGHLTLTLAPYINKVDRMITLVTIPTkqapgelitkyDPIRVRQYQNMEDAKTYGVDFTVR 547
Cdd:COG1629 451 DLKPETSTNYelGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPN-----------DSGFSTYYTNAGKARSYGVELELS 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 548 YQ-GKHFTAGGSYSYLDTEANQYDTENDVMQKVTIDGMAHHKANVYATWNHQfskkYQLGVGIYGRLSSKRYYQIDGDGK 626
Cdd:COG1629 520 YQlTPGLSLNASYSYTDAKFDDDTDGSADLDGNRLPGVPPLTANLGLTYEFP----GGWSLGLGVRYVGDRYLDDANTQG 595
|
650 660 670
....*....|....*....|....*....|.
gi 502828280 627 ---GYQLWRLSTNHQIGRLLKVDAGIDNIFD 654
Cdd:COG1629 596 apgGYTLVDLGAGYRFGDNLTLSLGVDNLFD 626
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
51-682 |
4.19e-70 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 240.82 E-value: 4.19e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 51 TEVISRRQLQQYAGKSIEDIL---SGLTASFDFSENdmSSRLQMNGLGNAYVLILIDGRRLHGDNGGEN-DLSLIDPHNI 126
Cdd:cd01347 2 VSVITAEDIEKQPATSLADLLrriPGVSVTRGGGGG--GSTISIRGFGPDRTLVLVDGLPLASSNYGRGvDLNTIPPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 127 EKIEIVKGASSALYGSDAIAGVINIITRKH-REQGVMVenTTRVGTYGDIRQHNGVALNYGKLSSYTNFqlqhsDGWQNT 205
Cdd:cd01347 80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPtDEFGGSV--TAGYGSDNSGSSGGGGFDVSGALADDGAF-----GARLYG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 206 aeeAIQQTEYHITDSRNKTVNRHTNWQIAERLTYQLTPAIELYADGSIYWKRI------YRPCGHHPGVDVKTWDLQYNN 279
Cdd:cd01347 153 ---AYRDGDGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDAdgpggtLPANGTGSSLGGGPSSNTNGD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 280 ASASVGGKWKLNKTDVITLDADWKKHAYN----YAYTDTTLTDGYVNGRFTNYFPYFPGDK---ELQSDQRLTNISLKGI 352
Cdd:cd01347 230 RDWDYRDRYRKRASLGLEHDLNDTGWTLRanlsYSYTDNDGDPLILNGGNNAAGGDLGRSGyssERDTTQLGFDAGLNAP 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 353 FA-LPYEQQLSAGLEYRYDwlkapmrvaggKATDNTEALYVQDEWALLDPLHITGGLRLTRNEG--------------FG 417
Cdd:cd01347 310 FGtGPVAHTLTLGVEYRRE-----------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYDQdskdtiaggttakkSY 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 418 TRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYIKNMNGVYlylGNEDLKAQTSNYFGASVEYTIGH-LTLTLA 495
Cdd:cd01347 379 SHWSPSLGLVYKLTDgLSLYASYSQGFRAPSLGELYGGGSHGGTAAV---GNPNLKPEKSKQYELGLKYDPGDgLTLSAA 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 496 PYINKVDRMITLVTIPTKQAPgelitkydpirVRQYQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEANQYDTEND 574
Cdd:cd01347 456 LFRIDIKNEIVSTPTNTGLGL-----------VTVYVNGGKARIRGVELEASYDlTDGLGLTGSYTYTDTEVKRTDGATT 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 575 vmqKVTIDGMAHHKANVYATWNHQFSKkyqLGVGIYGRLSSKRYYQIDGDG-----KGYQLWRLSTNHQIGRLLKVDAGI 649
Cdd:cd01347 525 ---GNRLPGIPKHTANLGLDYELPDEG---LTAGGGVRYRGKQYADTANGNntvkvPGYTLVDLSASYQFTKNLTLRLGV 598
|
650 660 670
....*....|....*....|....*....|....*..
gi 502828280 650 DNIFD----FVDRTPHGLHLGTTSPGRTIYASLTLRF 682
Cdd:cd01347 599 NNLFDkdyyTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
30-682 |
5.36e-50 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 185.67 E-value: 5.36e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 30 LQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDIL---SGLTASFDFSENDMSsrLQMNGLGNAYVLILIDGR 106
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALntvPGVDVTGGGRPPGQS--INIRGLQDNRVLVVVDGA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 107 RLHGDNGGENDLSL-IDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREqgvMVENTTRVGtyGDIRQHNGVALNY 185
Cdd:TIGR01785 79 RQNYQRGGAHNGSLfVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAD---LLRPGQLFG--GLAKLSYGSNNNS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 186 GKLSSYtnFQLQHSDGWQ-------NTAEEAIQQTEYHITDSRNKTVNRhtnwqiAERLTYQLTPAIEL-YADGSIYWKr 257
Cdd:TIGR01785 154 FGGSVA--VAGRLDDNLDalvaatyRDGGNYRNGNKEEATNSAYVQKNL------LAKLGWQLDDAQRLeFSYFTTEGS- 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 258 iyrpcghhpgvdvktWDLQYNNA---SASVGGKWKLNKTDVITLDadwkkhaYNYAYTDTTLTDGYVNGRFTNYF----- 329
Cdd:TIGR01785 225 ---------------LDEAQNSGpgtEYVLGSSSTLLASSTRDRS-------ATLTYNWTPEDNPWLDATASLYYnrten 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 330 -PYFPGDKELQSDQrlTNISLKGI-------FALPYEQQLSAGLEYRYDwlKAP-----------MRVAGGKATDNTEAL 390
Cdd:TIGR01785 283 dNDRSARGVGREEG--YQYTTYGAtlqntsrFDVASWSTLTYGVDWMKD--KRRtesfdpnsvttIVPNPPSAKEYFFGL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 391 YVQDEWALLD-PLHITGGLRLTRNE-----GFGT--------RLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQY 455
Cdd:TIGR01785 359 FLQDNIPLLDdRLTLSAGLRYDHYKlspktTADTeavdrsysRWSPSLGLSYKPVDwLTLYASYSQGFRAPSIDELYGTG 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 456 I-KNMNGVYLYLGNEDLKAQTS-------NYFGASVEYTIGHLTLTLAPYINKVDRMITLVTIPTKQAPGELITKYdpir 527
Cdd:TIGR01785 439 DhPGTPGGYTFAPNPNLKPETSktwelgaNLSFDNLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMNNIT---- 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 528 vrQYQNMEDAKTYGVDFTVRYQGKHFTAGGSYSYL---DTEANQYDTENDVMQKVTIDGMAHHKANVYATWNHQFSKKYQ 604
Cdd:TIGR01785 515 --QYVNIDGARIRGIEASASYDAGLWATGLSYGYTigkDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQS 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 605 lGVGIYGRLSSkryyQIDGDGKGYQLWRLSTNHQIGRL--LKVDAGIDNIFDFVDRTPHGLHLGTtsPGRTIYASLTLRF 682
Cdd:TIGR01785 593 -ESPTTEDVAA----NGLLTTPGYTVVDLYATYQPNAVkgLTVRFGVNNLTDRKYTPAQSVPGAG--PGRNFKGSVKYQF 665
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
10-682 |
8.98e-48 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 179.31 E-value: 8.98e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 10 GLSLLAIGAnAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSGLTASFDFSENDMSSRL 89
Cdd:PRK10064 11 GLCASAISC-AWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 90 QMNGLGNAYVLILIDGRRLHGDN----GGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREQ--GVMV 163
Cdd:PRK10064 90 SIRGLDSSYTLILIDGKRVNSRNavfrHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKwhGTVT 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 164 ENTTrvgtygdIRQHNGVALNYgKLSSYTNFQLqhsdgwqntAEEAIQQTEYHITDSRNKtvnrhTNWQIAERLTYQLTP 243
Cdd:PRK10064 170 VDTT-------IQEHRDRGDTY-NGQFFTSGPL---------IDGVLGMKAYGSLAKREK-----DDPQNSTTTDTGETP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 244 AIELYA--DGSIYWKriYRPCGHHP-----GVDVKTWD--------LQYNNASASVGGKWKLNKTDVitldadwkkhayn 308
Cdd:PRK10064 228 RIEGFTsrDGNVEFA--WTPNQNHDftagyGFDRQDRDsdsldknrLERQNYSLSHNGRWDYGNSEL------------- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 309 YAYTDttltdgyvngRFTNyfpYFPGDKELQSDQrltNISLKGIFALP---YEQQLSAGLEYRYDWLKAPMRVAGGKATD 385
Cdd:PRK10064 293 KYYGE----------KVEN---KNPGNSSPITSE---SNSIDGKYTLPltaINQFLTFGGEWRHDKLSDAVNLTGGTSSK 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 386 NT---EALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYIKNMNG 461
Cdd:PRK10064 357 TSasqYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDtVTVKGGWATAFKAPSLLQLSPDWTSNSCR 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 462 VYLYL-GNEDLKAQTSNYFGASVEYT-----IGHLTLTLAPYINKVDRMITLV-TIPTKQAPG-------ELITKYDPIR 527
Cdd:PRK10064 437 GACKIvGSPDLKPETSESWELGLYYMgeegwLEGVESSVTVFRNDVDDRISISrTSDVNAAPGyqnfvgfETNGRGRRVP 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 528 VRQYQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEanqyDTENDvmQKVTIDGMAHHKANVYATWNHQFSKKYQLG 606
Cdd:PRK10064 517 VFRYYNVNKARIQGVETELKIPfNDEWKLSLNYTYNDGR----DVSNG--ENKPLSDLPFHTANGTLDWKPLALEDWSFY 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 607 V-GIYgrLSSKRyyQIDGDGK---GYQLWRLSTNHQIGRLLKVDAGIDNIFDF-VDRTPHGLhlgtTSPGRTIYASLTLR 681
Cdd:PRK10064 591 VsGNY--TGQKR--ADSATAKtpgGYTIWNTGAAWQVTKDVKLRAGVLNLGDKdLSRDDYSY----NEDGRRYFMAVDYR 662
|
.
gi 502828280 682 F 682
Cdd:PRK10064 663 F 663
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
10-682 |
7.06e-41 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 159.29 E-value: 7.06e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 10 GLSLLAIGANAQTDIWRADS---LQEVVVTGTGTQHL----------------LKDAPVQTEVISRRQLQQYAGKSIEDI 70
Cdd:COG4773 9 GLAAAAAGALAQAAAAAAAEattLPEVTVTGTAEGTGgytakssstatkldtpLRETPQSVSVVTRQLIEDQGATTLDDA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 71 L---SGLTASFDFSenDMSSRLQMNGLGNAYvlILIDGRRLHGDNGGendlsLIDPHNIEKIEIVKGASSALYGSDAIAG 147
Cdd:COG4773 89 LrnvPGVTVSSYDG--GGRDSFSIRGFSIDN--YLRDGLPLGGFGGG-----QPDTANLERVEVLKGPAGLLYGAGSPGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 148 VINIITRK-HREQGVMVenTTRVGTYGDIRQH---NGvALN-YGKLSSYTNFQLQHSDGWQNTaeeaiqqteyhiTDSRN 222
Cdd:COG4773 160 LVNLVTKRpTAEPQGEV--SLSAGSWDTYRATadvGG-PLNeDGTLRYRLNAAYEDGDSFRDG------------VDNRR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 223 KTvnrhtnwqIAERLTYQLTPAIELYADGSIYWKRIYRPCGHHPGVDVKTwDLqynNASASVGGKWKLNKTDVIT----- 297
Cdd:COG4773 225 TL--------IAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLL-DL---PRSTNLGEPWDYYDTETTTlfael 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 298 ---LDADWK-KHAYNYAYTDTTLTDGYVNGRF---TNYFPYFPGDKELQSDQRLTNISLKGIFAL-PYEQQLSAGLEYR- 368
Cdd:COG4773 293 ehrFNDDWSlRANARYSDSDRDGRSAYAYGAPdaaTGTLTRYASARDGDSRSDSLDANLNGKFETgGLEHTLLVGADYSr 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 369 ---------------YDWLKAPMRVAGGKATDNTE-----ALYVQDEWALLDPLHITGGLRLTRNEGFG----------- 417
Cdd:COG4773 373 ydsdsdsatagtiniYNPVYGNLPEPDFDASDTDTttrqtGLYAQDQISLTDRLSLLLGGRYDWYETDStnrlggsttsy 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 418 --TRLTPKLSAMLKLGD-LRLRATWSQGYKtptpkelhyqyiknmNGVYLYLGNEDLKAQTS-NY-FGASVEYTIGHLTL 492
Cdd:COG4773 453 ddSAFTPRAGLVYDLTPgLSLYASYSESFE---------------PQSGADNNGNPLDPETGkQYeAGVKGELFDGRLNA 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 493 TLAPY-INKVDRMITlvtiptkqapgelitkyDPIRVRQYQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEANQyD 570
Cdd:COG4773 518 TLAVFdITQKNVATT-----------------DPDNPNFYVQVGEVRSRGVELELSGElTPGLNLIAGYTYTDAKITK-D 579
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 571 TENDVMQKVTidGMAHHKANVYATWNHQFSKKYQLGVGIYGRLSSKRYYQIDGDGK--GYQLWRLSTNHQIGRLLKVDAG 648
Cdd:COG4773 580 ADALEGKRLT--NVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTlpSYTLVDAGARYDLGKNWTLQLN 657
|
730 740 750
....*....|....*....|....*....|....*...
gi 502828280 649 IDNIFD---FVD-RTPHGLHLGttsPGRTIYASLTLRF 682
Cdd:COG4773 658 VNNLFDkkyYASsGSRGYVYYG---APRNVRLSLSYKF 692
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
7-682 |
1.18e-40 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 158.40 E-value: 1.18e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 7 LAIGLSLLAIGANAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILS---GLTASFDFSEN 83
Cdd:PRK13483 10 SALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLdvpGVVVTGGGDRT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 84 DMSSRlqmnGLGNAYVLILIDGRRL-------HGDNGGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKH 156
Cdd:PRK13483 90 DISLR----GMGSQYTLILVDGKRQssretrpNSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITRKV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 157 REQ--------GVMVENTTRvgtyGDIRQHNgVALNyGKLSSyTNFQLQHSDGWQNTAEEAIqqtEYHITDSRNKTVNRH 228
Cdd:PRK13483 166 PNEwqgevrldTTLQENSDS----GNVYQAN-FFVN-GPLIK-DLLGLQLYGQYTQREEDDI---EGGYRDKDARSLTAK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 229 TNWQIAER--LTYQLTPAIELYADG---SIYWKRIYRPCGHHPGVDVKTWDLQYNNASASVGGKWklnktdvitldadwk 303
Cdd:PRK13483 236 LALTPNEDhdIMLEVGTSNQERDSTvgkTVAPLAPGESCGRRGCPESSTTEYERSTVSLSHTGRW--------------- 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 304 khaynyaytDTTLTDGYVN-GRFTNyfpyfpgdkeLQSDQRLTNISLKGIFALP--YEQQLSAGLEYRYDWL--KAPMRV 378
Cdd:PRK13483 301 ---------DFGTSDTYIQhEEFDN----------KSREMKIKNTDFQSSLVAPlgQEHTLTFGAAYNHQDLtdETSNQI 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 379 AGGKATDNTE-ALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYI 456
Cdd:PRK13483 362 SDLTDISRTQwAVFSEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPsWTVKGGVSTGFRAPSLRQTTPDWG 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 457 KNMNGVYLYlGNEDLKAQTSNYFGASVEYTIGH-LTLTLAPYINKVDRMITLVTIPTKQ---APGELITkyDPIrvrQYQ 532
Cdd:PRK13483 442 QVSRGGNIY-GNPDLKPETSLNKELGLYYDLGSgLTASLTVFYNEFKDKITRVACPATQctdGPNQFGA--DPT---TYV 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 533 NMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTE--ANQYdtendvmQKVTIDGMAHHKANVYATWnhQFSKKYQ--LGV 607
Cdd:PRK13483 516 NIDEAVTQGVEASLSYPiTSTLSLSGNYTYTDSEqkSGAY-------KGSPLNQLPKHLFQASLNW--EPTDRLNswARV 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 608 GIYGRLSSKryyqIDGDGKG------YQLWRLSTNHQIGRLLKVDAGIDNIFDF-VDRTPHglhlGTTSPGRTIYASLTL 680
Cdd:PRK13483 587 NYRGEESQP----TTGPSSSsfiapsYTFLDLGANYQLTDNLKLSAGIYNLFDKeINYEEY----GYVEDGRRYWLGMTY 658
|
..
gi 502828280 681 RF 682
Cdd:PRK13483 659 SF 660
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
33-328 |
3.83e-40 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 148.87 E-value: 3.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 33 VVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSGLtASFDFSEN---DMSSRLQMNGLGNAYVLILIDGRRLH 109
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRV-PGVQVSSSggpGSAASISIRGLGSNQTLVLIDGVPLN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 110 GDNGGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREqGVMVENTTRVGTYGDIRQHNGVALNYGKLS 189
Cdd:COG4206 80 DPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKK-GFKGSVSASYGSFGTRRLSASLSGGAGKFS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 190 SYTNFQLQHSDGWQNTAEEAIQQTEYhitdsRNKTVNRhtnwqiaeRLTYQLTPAIELYADGSIYWKRiyrpcghhpgVD 269
Cdd:COG4206 159 YSLSASYRRSDGYRYNDPDLRNNDGY-----ENTSLNA--------RLGYKLGDNGSLSLSGGYSDSE----------RG 215
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 502828280 270 VKTWDLQYNNASASVGGKWKLNKTDVITLDADWKKHAYNYAYTDTTLTDGYVNGRFTNY 328
Cdd:COG4206 216 YPGAVGSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGL 274
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
31-682 |
7.45e-39 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 153.72 E-value: 7.45e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 31 QEVVVTGTGTQHL----LKDAPVQTEVISRRQLQQYAGKSIEDIL---SGLTASFDFSENdmSSRLQMNGLGNAYVLILI 103
Cdd:TIGR01786 1 DTITVTATRTADPqrrdLSVTPASVSVISREQLKSQQVRNLRDLLryePGVSVVEGGRGG--SQGINIRGLDKNRVAVLV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 104 DGRRLHGDNGGENDLSL----IDPHNIEKIEIVKGASSALYGSDAIAGVINIIT-------RKHREQGVMVeNTTRVGTY 172
Cdd:TIGR01786 79 DGIRQNTSYGGQGSTFYainsIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTkdaadllKPGKDLGGLS-KLGYSSAN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 173 GDIRQHNGVALNYGKLssytNFQLQHSdgwQNTAEEAIQQTEYHITDSRNKTVNRHTNWQIAE---RLTYQLTPAIEL-- 247
Cdd:TIGR01786 158 NRFTQSVAAAGRNDDV----DALVQAT---YRRGHELKNGNKANIGNESKRSKPNPSDYKSQSflaKLGWQLNDAHRLgl 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 248 ---YADGSiYWKRIYRPCGHHPGVDVKTWDLQYNNASASVGGKWKLNKTDVITLDADWKKHAYNYAYTDTTLTDGYV--- 321
Cdd:TIGR01786 231 sleYTQTD-YDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYELNPDNSWLDTVKLALDKQYIQLYNYLnat 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 322 ----------NGRFTNYFPYFPG--DKELQSDQRLTNISLK-GIFAlpYEQQLSAGLEYRyDWLKAPMRVAG-----GKA 383
Cdd:TIGR01786 310 sasdypgvdkNGRYKDKYDYYTLgfDTNNKIEFSVHSLSLTyGLDR--FKDKVSTGDSRR-NLPTAAYNLYGyegenRPV 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 384 TDNTEALYVQDEWALLDPLHITGGLRL-----------TRNEGF----GTRLTPKLSAMLKLGD-LRLRATWSQGYKTPT 447
Cdd:TIGR01786 387 KGSNFGLFLQDNIKLGDWLSLSAGLRYdhyktdpkadeSKDYGAisktYSRWSPSLGLTYKPTPwLTLYYSYSQGFRAPS 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 448 PKELHYQYIKNMNGVYLYLGNEDLKAQTSNYFGASVEYTIGHLTLTLAPYINKVDRMITLVTIPTKQAPgelITKYDPIR 527
Cdd:TIGR01786 467 FDELYGTGAHPGGGPYTFLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIDLGIGVTAKGN---MAQVGSNT 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 528 VRQYQNMEDAKTYGVDFTVRYQGKHFTAGG-----SYSYLDTEANQYDTeNDVMQKVTidgmahhKANVYATWNHQFsKK 602
Cdd:TIGR01786 544 ITNYVNIDNARIRGIELSGRYDLGSFFSGPdgwttTLKYGYTKGKDSDT-NPWLNAIT-------PLKVVLGLGYDH-PD 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 603 YQLGVGIYGRLSSKR-------YYQIDGDG--------KGYQLWRLSTNHQIGRLLKVDAGIDNIFD------FVDRTPH 661
Cdd:TIGR01786 615 EKWGVGLTLTFSGAKdavdayaTYYENGEAakagplrtPSYTVVDLYGYYKPNKNLTLRFGVYNLLDrkyttwESARQAG 694
|
730 740
....*....|....*....|.
gi 502828280 662 GLHLGTTSPGRTIYASLTLRF 682
Cdd:TIGR01786 695 PLATGYTAPGRNYKASVEYKF 715
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
44-682 |
3.06e-36 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 145.02 E-value: 3.06e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 44 LKDAPVQTEVISRRQLQQYAGKSIEDIL---SGLTasFDFSENDMSSRLQMNGLgNAYVLILIDGRRlhgDNGGENdlsl 120
Cdd:COG4774 6 LLDTPQSVTVVTRELIEDQGATSLADALrnvPGVT--FGAGEGGNGDSFSIRGF-SASGDIYVDGLR---DPGQYR---- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 121 IDPHNIEKIEIVKGASSALYGSDAIAGVINIITRK-HREQGVMVenTTRVGTYGDIRQHNGVALNYGKLSSYT-NFQLQH 198
Cdd:COG4774 76 RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRpTDEPFTEV--TLTYGSDGQRRATLDVNGPLGDDLAYRlNGMYRD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 199 SDGWQNtaeeaiqqteyHITDSRnktvnrhtnWQIAERLTYQLTPAIELYADGSIYWKRI-------YRPCGHHPGVDVK 271
Cdd:COG4774 154 SDSYRD-----------GVDNDR---------WGIAPSLTWRLGDRTRLTLDYEYQDDDRtpdygvpAVANGRPVDVDRS 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 272 TW------DLQYNNASASVGGKWKLNktDVITLDADWKKHAYNYAYTDTTLTDGYVNGRFTNYFPYFPGDKELQSDQrlt 345
Cdd:COG4774 214 TFygqpddYSDSETDSATLRLEHDFN--DNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQ--- 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 346 nISLKGIFAL-PYEQQLSAGLEYRYDWLKAPMRVAGG--------------------------KATDNTEALYVQDEWAL 398
Cdd:COG4774 289 -TDLTGKFDTgGVKHTLLAGVEYSREDSDNARYSGGGtaptvnlynpvygapvtgptlggadnDSRTDTTGLYLQDTISL 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 399 LDPLHITGGLRL----TRNEGFGT----------RLTPKLSAMLKLGD-LRLRATWSQGYKTPTpkelhyqyiknmnGVY 463
Cdd:COG4774 368 TDRWSLLAGLRYdrfdTDYTDRTTgattssyddsAFSPRAGLVYKPTPnLSLYASYSTSFNPGG-------------GAP 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 464 LY-LGNEDLKAQTS-NY-FGASVEYTIGHLTLTLAPY-INKVDRMITlvtiptkqapgelitkyDPIRVRQYQNMEDAKT 539
Cdd:COG4774 435 SLsNAGQALDPEKSrQYeVGVKWDLLDGRLSLTAALFrIEKTNVRTT-----------------DPANPGVYVQTGEQRS 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 540 YGVDFTVRYQ-GKHFTAGGSYSYLDTEANQYDTENDVMQKVTidGMAHHKANVYATWNHQFSKkyqLGVGIYGRLSSKRY 618
Cdd:COG4774 498 RGVELEATGElTPGWSVLAGYTYLDAEITKSANAANVGNRLP--NVPRHSASLWTTYDLPLPG---LTLGGGVRYVGSRY 572
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502828280 619 YQIDGDGK--GYQLWRLSTNHQIGRLLKVDAGIDNIFD--FVDrTPHGLHLGTTSPGRTIYASLTLRF 682
Cdd:COG4774 573 ADAANTVKlpSYTRFDAGASYRLNKNLTLRLNVNNLTDkrYYA-SAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
277-681 |
3.53e-36 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 142.60 E-value: 3.53e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 277 YNNASASVGGKWKLNKTDVITLDADwkkhaYNYAYTDTTLTDGYVNGRFTNYFPYFPGDKELQSDQRLTNISLKGIFALP 356
Cdd:pfam00593 58 TDRKRLSLGYDYDLGDGLSWLSTLR-----LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHD 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 357 Y---EQQLSAGLEYRYDWLK--------APMRVAGGKATDNTEALYVQDEWALLDPLHITGGLRLTRNEGFGT------- 418
Cdd:pfam00593 133 LllgVELRTAGLDYRRLDDDaydpydpaNPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDdgngggd 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 419 -------RLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELhYQYIKNMNGVYLYLGNEDLKAQTSNYFGASVEYTIGHL 490
Cdd:pfam00593 213 nfsrsysAFSPRLGLVYKPTDnLSLYASYSRGFRAPSLGEL-YGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 491 TLTLAPYINKVDRMITLVTIPTkqapgelitkYDPIRVRQYQNMEDAKTYGVDFTVRYQG-KHFTAGGSYSYLDTEANQY 569
Cdd:pfam00593 292 SLSLALFYIDIKNLITSDPDGP----------GLGGTVYTYTNVGKARIRGVELELSGRLwGLGLSGGGYTYTDADDDAD 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 570 DTENDvmqkVTIDGMAHHKANVYATWNHQfSKKYQLGVGI-YGRLSSKRYYQIDGDGK--GYQLWRLSTNHQIGRLLKVD 646
Cdd:pfam00593 362 ADDTG----NPLPNVPRHTANLGLTYDFP-LGGWGARLGArYVGSGERRYGDAANTFKtpGYTLVDLSAGYRLNKNLTLR 436
|
410 420 430
....*....|....*....|....*....|....*....
gi 502828280 647 AGIDNIFDFVDRTPHGLHLGTTS----PGRTIYASLTLR 681
Cdd:pfam00593 437 LGVNNLFDKYYKRYYSSGGGNLGgypgPGRTFYLGLSYK 475
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-682 |
2.48e-35 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 142.76 E-value: 2.48e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 8 AIGLSLLAIGANAQTDiwrADSLQEVVVTGTGTQHL-LKDAPVQTEVISRRQLQQYAGKSIEDILS---GLTASfdfSEN 83
Cdd:COG4772 4 ALAAALLLAAAAAAEA---ATTLETVVVTGSRAAEArLKDVPGSVSVVDREELENQAATSLREVLRrvpGVNVQ---EED 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 84 DMSSRLQMN--GLGNAY---VLILIDGRRLHGDNGGENDLSLI-DPHNIEKIEIVKGASSALYGSDAIAGVINIITRK-H 156
Cdd:COG4772 78 GFGLRPNIGirGLGPRRsrgITLLEDGIPIAPAPYGDPAAYYFpDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTiP 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 157 REQGVMVENTtrVGTYGDIRQHNGVALNYGKLSSYTNFQLQHSDGWQntaeeaiQQTEYHITDsrnktVNRHTNWQIAER 236
Cdd:COG4772 158 TAFGGELRVT--GGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGFR-------DNSGFDIND-----FNAKLGYRLSDR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 237 ------LTYQ---------LTPAiELYADgsiyWKRIYRPcghhpgvdvktwDLQYNNASASVGGKWKLNKTDVITLDA- 300
Cdd:COG4772 224 qeltlkFQYYdedantpggLTDA-QFDAD----PRQSYRP------------ADQFDTRRTQLSLRYEHQLSDNTTLTTt 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 301 --------DWKKHAYNYAYTDTTLTDGYVNGRFTNYfpyfpGdkelqSDQRLT-NISLKGIfalpyEQQLSAGLEYRYDW 371
Cdd:COG4772 287 ayyndfsrNWYIRQNTADPNTPGLGLRGNPRGYRSY-----G-----IEPRLThRFELGGV-----PHTLEVGLRYHREE 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 372 LK-------APMRVAGGKATDNTE------ALYVQDEWALLDPLHITGGLRL----TRNEGFGTRLT------------- 421
Cdd:COG4772 352 EDrkqyvntYGQGRSGAGLRRDRRfsadalAAYAQNRFELTGRLTLTPGLRYehirRDRTDRYSTRTggddsgsnsysef 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 422 -PKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQyiknmNGvylylGNEDLKAQTSNYFGASVEYTIGH-LTLTLAPYI 498
Cdd:COG4772 432 lPGLGLLYQLTDnLQLYANVSRGFEPPTFGDLAYG-----NG-----GNPDLKPEKSWNYELGTRGRIGNgLSAEVALFY 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 499 NKVDRMITLVTIPTKQApgelitkydpirvRQYQNMEDAKTYGVDFTVRYQ-----GKHFTAGGSYSYLDTEanqYDTEN 573
Cdd:COG4772 502 IDYDNELGSCSAAGGDR-------------STFTNAGETRHQGLELALDYDllkggGLGLPLFAAYTYTDAE---FTSDF 565
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 574 DVmqkVT----IDGMAHHKANVYATWNHQfskkyQLGVGIYGRLSSKRY------YQIDGDGK--GYQLWRLSTNHQIGR 641
Cdd:COG4772 566 GP---VFagnrLPYVPRHQLTAGLGYEHG-----GWTANLNGRYVSEQFtdaantVADGSFGKipSYTVLDLSASYDFGK 637
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 502828280 642 LLKVDAGIDNIFD---FVDRTPHGLHLGTTSPGRTIYASLTLRF 682
Cdd:COG4772 638 NLSLFAGVNNLFDkryIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
3-682 |
7.52e-35 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 141.06 E-value: 7.52e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 3 LGKQLAIGLSLLAIGANAQTDiwradSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILS---GLTASFD 79
Cdd:PRK13513 13 LVIAAAISSQAYAAEKTNTAT-----PTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKdvpGVVVTGG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 80 FSENDMSSRlqmnGLGNAYVLILIDGRRL-------HGDNGGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINII 152
Cdd:PRK13513 88 GSTSDISIR----GMAAKYTLILVDGKRVdtrstrpNSDGSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINII 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 153 TRKHRE--QGVMVENTT--RVGTYGDIRQHNGVA---LNYGKLSSYTNFQLQHSDgwqntaEEAIQQTeYHITDSRNKTv 225
Cdd:PRK13513 164 TRKVQKewHGSLRADATlqEDSKSGDIFQTNAYAsgpLIDGLLGLKVSGLLSHRS------EDKIIDG-YNEQRMRNGT- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 226 nrhtnwqiaerLTYQLTPAielyadgsiywkriyrpcghhpgvDVKTWDLQ---YNNASASVGGKwklnktdviTLDADW 302
Cdd:PRK13513 236 -----------ATFSLTPD------------------------DNNEFDFEigrYVQDRNSTPGR---------TLALNG 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 303 KKHAYNYAYTDTTLT-DGYVN-GRFTNYFPY----FPGdKELQSDQRLTNISLKGIFAlpyEQQLSAGLEYRYDWL---- 372
Cdd:PRK13513 272 TNSDTQYDRNNYAIThNGYYDfGNSTSYIQRdetrNPS-RQMKSVDTIFNTQTSFLLD---DHTLSLGGQYRYEELydkg 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 373 -KAPMRVAGGKATDNTEALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKE 450
Cdd:PRK13513 348 nQLPSASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADqWTLKGGVSTGYRSPDLRQ 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 451 LHYQY-----IKNMNGvyLYLGNEDLKAQTsnyfgaSVEYTIGHL---------TLTL-----APYINKVDRMITLVTIP 511
Cdd:PRK13513 428 ATDNWgqltgGGGLPA--LILGNSDLKPEK------SISQEIGILwdnqenlnaSVTLfntdfKDKITEVRNCDTTNTDG 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 512 TKQAPGeliTKYDPIRVRqyQNMEDAKTYGVDFTVRYQ-GKHFTAGGSYSYLDTEANQYDTENDVMQKvtidgMAHHKAN 590
Cdd:PRK13513 500 QCVFNG---INYDFISDR--INVDKANMRGVEATFNWDiNQAWSLATNYTFTQSEQKSGAFAGQPLNQ-----MPKHMAN 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 591 vyATWNHQFSKKYQLGVGIYGRLSSKRYYQIDGDGKG---YQLWRLSTNHQIGRLLKVDAGIDNIFD-FVDRTPHglhlG 666
Cdd:PRK13513 570 --ATLNWQTTEDFATWIRINYRGKTSEYLNRTSMGSGtpsYTFVDLGASYQLTKELRLMGGVYNLLDkRVDIDVN----D 643
|
730
....*....|....*.
gi 502828280 667 TTSPGRTIYASLTLRF 682
Cdd:PRK13513 644 KVLDGRRYMVGASYDF 659
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
1-597 |
1.96e-33 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 136.68 E-value: 1.96e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 1 MKLGKQLAIGLSLLAIGANAQTDIWRADSLQEVVVTGTGTQHLLKDAPVQTEVISRRQLQQyagKSIEDI------LSGL 74
Cdd:PRK13484 1 MKNKYIIAPGIAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQK---KPVSDLvdavkdVEGI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 75 TASFDFSENDMSSRlqmnGLGNAYVLILIDGRRLHG----DNG-GENDLSLIDPHN-IEKIEIVKGASSALYGSDAIAGV 148
Cdd:PRK13484 78 SITGGNEKPDISIR----GLSGDYTLILVDGRRQSGresrPNGsGGFEAGFIPPVEaIERIEVIRGPMSSLYGSDAIGGV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 149 INIITRKhreqgvmVENTTRVG--TYGDIRQHNGVALNYGKLSSYTN-------FQLQHSDGWQNTAEEAIQQTEYHiTD 219
Cdd:PRK13484 154 INIITKP-------VNNQTWDGvlGLGGIIQEHGKFGNSTTNDFYLSgplikdkLGLQLYGGMNYRKEDSISQGTPA-KD 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 220 SRNKTVNRH---TNWQI------AERLTYQLTPAIELYA---DGSIYWKRIYRPCGHhpgvDVKTWDLQYNNASASVGGK 287
Cdd:PRK13484 226 NKNITATLQftpTESQKfvfeygKNNQVHTLTPGESLDAwtmRGNLKQPNSKRETHN----SRSHWVAAWNAQGEILHPE 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 288 WKLNKTDVITLDADWKKHAYN---YAYTD--TTLTDGYVNGRFTNYFPyfpgdkelqsdqrltnislkgifalpyEQQLS 362
Cdd:PRK13484 302 IAVYQEKVIREVKSGKKDKYNhwdLNYESrkPEITNTIIDAKVTAFLP---------------------------ENVLT 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 363 AGLEYRYDWLKAPMRVaGGKATDNT------EALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRL 435
Cdd:PRK13484 355 IGGQFQHAELRDDSAT-GKKTTETQsvsikqKAVFIENEYAATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDnLTL 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 436 RATWSQGYKTPTPKELHYQY-IKNMNGVYLYLGNEDLKAQTSNYFGASVEYTIG-----HLTLTLAPYINKVdrmitlvt 509
Cdd:PRK13484 434 KGGIAKAFRAPSIREVSPGFgTLTQGGASIMYGNRDLKPETSVTEEIGIIYSNDsgfsaSATLFNTDFKNKL-------- 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 510 ipTKQAPGELitkyDPI---RVRQYQNMEDAKTYGVDFTVR---YQGKHFTAggSYSYLDTEANQYDTE--NDVMQKVTI 581
Cdd:PRK13484 506 --TSYDIGTK----DPVtglNTFIYDNVGEANIRGVELATQipvYDKWHVSA--NYTFTDSRRKSDDESlnGKSLKGEPL 577
|
650
....*....|....*.
gi 502828280 582 DGMAHHKANVYATWNH 597
Cdd:PRK13484 578 ERTPRHAANAKLEWDY 593
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
1-682 |
1.22e-29 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 125.25 E-value: 1.22e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 1 MKLGKQLAIGLSLLAIG--ANAQTDIWRADSLQEVVVTGTGTQHLlKDAP----VQTEVISRRQlqqyAGKSIEDI---- 70
Cdd:PRK13528 3 MRVNKILWLLTVLLVGLnsPVSAAESSDDDNGETMVVEATAEQEL-KQQPgvsiITAEDIKKRP----PVNDLSDIirkm 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 71 ----LSGLTASFDFSENdmsSRLQMNGLGNAYVLILIDGRRLHGDNG------GEN----DLSLIDPHNIEKIEIVKGAS 136
Cdd:PRK13528 78 pgvnLTGNSASGTRGNN---RQIDIRGMGPENTLILIDGVPVTSRNSvryswrGERdtrgDTNWVPPEMVERIEVIRGPA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 137 SALYGSDAIAGVINIITRK--HREQGVMV--ENTTRVGTYGDIRQHN--------GVALNYgklSSYTNFQLQHSDGW-- 202
Cdd:PRK13528 155 AARYGSGAAGGVVNIITKRptNDWHGSLSlyTNQPESSKEGATRRANfslsgplaGDALTM---RLYGNLNKTDADSWdi 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 203 ---QNTAEEAIQQteyhitDSRNKTVNRHTNWQIAERLTYQLTPAielYA-DGSIYwkriyrpcghhpgvdvkTWDLQYN 278
Cdd:PRK13528 232 nssAGTKNAAGRE------GVRNKDINGVLSWKMTPQQILDFEAG---YSrQGNIY-----------------AGDTQNS 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 279 NASASVGGKWKLNK-TDV-------ITLDADW----KKHAYNYAYTDTTLTD----GYVNGRFTNYFPYfpgdkelqSDQ 342
Cdd:PRK13528 286 NSSAVTESLAKSGKeTNRlyrqnygLTHNGIWdwgqSRLGFYYEKTNNTRMNeglaGGGEGRITADQTF--------TTS 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 343 RLTNISLKG----IFALPYEQQLSAGLEYRYDWLKAP--MR--VAGG--------------KATDNTEALYVQDEWALLD 400
Cdd:PRK13528 358 RLESYRTSGelnvPLNWLFEQTLTVGAEWNRDELNDPssTSltVKDGdiggisgsaadrssKNKSEISALYVEDNIEPVP 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 401 PLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHYQYI-----------KNMNGVYLyLGN 468
Cdd:PRK13528 438 GTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDyFKVKAGIARAFKAPNLYQSSEGYLlysrgngcpkdITSGGCYL-VGN 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 469 EDLKAQTSNYFGASVEYTIGHLTLTLAPYINKVDRMITLVTIPTKQAPgelitkyDPIRVRQYQNMEDAKTYGVD--FTV 546
Cdd:PRK13528 517 KNLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDDVIGRTA-------SGAYILQWQNGGKAVVEGLEgnLLV 589
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 547 RYQGKHFTAGGSYSYLdTEANQYDTEN--DVMQKVTIDGMAHHKAnvyatwNHQFSkkYQLGVGIYGRLSSKRYYQIDGD 624
Cdd:PRK13528 590 PLMKDRLNWNTNATYM-ITSEQKDTGNplSVIPKYTINSTLDWQI------TQALS--ANVNWTLYGKQKPRTHAESRSE 660
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 625 GKG---------YQLWRLSTNHQIGRLLKVDAGIDNIFD-FVDRTPHGlhlGTT--SPGRTIYASLTLRF 682
Cdd:PRK13528 661 ETGglsgkelgaYSLVGVNVNYDINKNLRLNVGVSNLFDkQIYREGEG---ANTynEPGRAYYAGVTASF 727
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
44-148 |
1.39e-27 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 107.35 E-value: 1.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 44 LKDAPVQTEVISRRQLQQYAGKSIEDILSGLTA-SFDFSENDMSSRLQMNGLGNAYVLILIDGRRLHGDNGGENDLSLID 122
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGvSVSSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSGGGGSVDLNSID 81
|
90 100
....*....|....*....|....*.
gi 502828280 123 PHNIEKIEIVKGASSALYGSDAIAGV 148
Cdd:pfam07715 82 PEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
33-654 |
4.14e-25 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 110.88 E-value: 4.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 33 VVVTGTGTQHLLKDAPVQTEVISRRQLQ--QY-----AGKSIE--DILSGL--TASFDFSendmssrlqMNGLGNAYVLI 101
Cdd:PRK13486 28 MIVSASGYEKKLTNAAASVSVISQEELQssQYhdlaeALRSVEgvDVESGTgkTGGLEIS---------IRGMPASYTLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 102 LIDGRRLHGD-----NG-GENDLSLIDP-HNIEKIEIVKGASSALYGSDAIAGVINIITRKHREQ-------GVMVENTT 167
Cdd:PRK13486 99 LIDGVRQGGSsdvtpNGfSAMNTGFMPPlAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKwlssvnaGLNLQESN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 168 RVGTYGDIRQHNGVALNYGKLSSYTNFQLQHSDGWQNTAEEAIQQTEY-HITDSRNKTVNRHTNWQIAERltyqltpaie 246
Cdd:PRK13486 179 KWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRIpYPTESQNYNLGARLDWKASEQ---------- 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 247 lyadgSIYWkriyrpcghhpgVDVKTWDLQYNNASASVGgkwKLNKTDVITLDADWKKHAYNYaytDTTLTDG----YVN 322
Cdd:PRK13486 249 -----DVLW------------FDMDTTRQRYDNRDGQLG---SLTGGYDRTLRYERNKISAGY---DHTFTFGtwksYLN 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 323 GRFTNYFPYFPGDKELQSDQ----------RLTNISLKGIFALPY--EQQLSAGLEYRYDWLKAPMRVA--GGKATDNTE 388
Cdd:PRK13486 306 WNETENKGRELVRSVLKRDKwglagqprelKESNLILNSLLLTPLgeSHLVTVGGEFQSSSMKDGVVLAstGETFRQKSW 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 389 ALYVQDEWALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLKLGD-LRLRATWSQGYKTPTPKELHyqyiKNMNGV----- 462
Cdd:PRK13486 386 SVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADaWTLKGGVTTGYKAPRMGQLH----KGISGVsgqgk 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 463 YLYLGNEDLKAQTSNYFGASVEYTIGH-LTLTLAPYINKVDRMITLVTIPTKqapgelitkydpirVRQYQNMEDAKTYG 541
Cdd:PRK13486 462 TNLLGNPDLKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKIVSYSINDN--------------TNSYVNSGKARLHG 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 542 VDF--TVRYQGKHFTAGGSYSYldTEANQYDTEND-VMQKVTIDGMAHHKAN-----VYATW-NHQFSKKYQLGVGIYGR 612
Cdd:PRK13486 528 VEFagTLPLWSEDVTLSLNYTW--TRSEQRDGDNKgAPLSYTPEHMVNAKLNwqiteEVASWlGARYRGKTPRFTQNYSS 605
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 502828280 613 LSSKRYYQIDGDGKGYQLWRL---STNHQIGRLLKVDAGIDNIFD 654
Cdd:PRK13486 606 LSAVQKKVYDEKGEYLKAWTVvdaGLSWKMTDALTLNAAVNNLLN 650
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
46-682 |
2.11e-24 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 108.65 E-value: 2.11e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 46 DAPVQTEVISRRQLQQYAGKSIEDILSGLTASFDFSENDMSSRLQMN----GLGNAYVLILIDGRRLHGDNGgendLSLI 121
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITirgfGLEVDIDNVYLDGVPLLSRGN----LAIV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 122 DPHNIEKIEIVKGASSALYGSDAIAGVINIITRK--HREQGVMVENTTRVGTYGDIRQHNG-VALNyGKLSSYTNFQLQH 198
Cdd:TIGR01783 77 DPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRpqDEPKGSVTFGAGTRSGYRTAFDLGGpLGAD-GTFRGRLNGARQD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 199 SDGWQNTAEEAIQqteyhitdsrnktvnrhtnwQIAERLTYQLTPAIELYADGSIYWKRI---YRPCGHHPGVDVKTwdl 275
Cdd:TIGR01783 156 GDSFYDGAGEETR--------------------LGATATDWQLDDRTLLRLGAYYQKERDrggYGGLPASGGTSGRD--- 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 276 qyNNASASVGGKWKLNKTDVITLDADWK-KHAYNYAYTDT-------TLTDGYVNGRF-----TNYFPYFPGDKELQSDQ 342
Cdd:TIGR01783 213 --LSSDRYLGTSSNRNYDDREYLSYGLSlEYQFNDVWTGKqnlrysyFDTDSNQVQASgyssdGGLFGRSLTVVNVKQDR 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 343 RLTNISLKGIFAL-PYEQQLSAGLEY----RYDWLKAPM-------RVAGGKATD---------------NTEALYVQDE 395
Cdd:TIGR01783 291 VQIDAGLDGEFETgPIEHDLLLGVSYgqrtTNRFNNTGYpsdniysLTATSSARTdigdspkdralssttKALNGVALQR 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 396 WALLDPLHITGGLRLTRN-------------EGFGTRLTPKLSAMLKL-GDLRLRATWSQGYKTPTPKELHYQyiknmng 461
Cdd:TIGR01783 371 ILLADKWTLTLGGRYDSVdvksnngvagstgKRDDSQFTPSLGVAYKPtDDWSLYASYAESFKPGGYYPKGAG------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 462 vylyLGNEDLKAQTSNYFGASVEYTIG-HLTLTLAPYINKVDRMITlvtiptkqapgelitkYDPIRVRQYQNMEDAKTY 540
Cdd:TIGR01783 444 ----NSGDILEPEKGKNYELGVRYDLGdSLLATAALFRITKDNQLV----------------QDPVNGTFSVNAGKTRNR 503
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 541 GVDFTVRYQ-GKHFTAGGSYSYLDTEAnqYDTENDVMQKVTIDGMAHHKANVYATWNHqFSKKYQLGVGIYGRLSSKRYY 619
Cdd:TIGR01783 504 GVELEARGYlTPGLSLSAGYTYTDAEF--TEDTNGDTQGNTVPFVPKHTASLWASYAP-PVGDNGLTLGGGVQYTGKAYV 580
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 502828280 620 QIDGDGK--GYQLWRLSTNHQIGRLLKVDA--GIDNIFDfVDRTPHGLHLGTT-----SPGRTIYASLTLRF 682
Cdd:TIGR01783 581 DGGNTGKvpSYTVVDLSVRYDLTKKKNLTLalNVNNLFD-RDYYTSGYRWGPSayiypGAPRTVGLSVSYDF 651
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
93-682 |
1.77e-20 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 96.25 E-value: 1.77e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 93 GLGNAYVLILIDGRRLHGDNG------GEN----DLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRKHREqgvm 162
Cdd:PRK13524 103 GMGPENTLILIDGKPVSSRNSvrygwrGERdtrgDTNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTG---- 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 163 vENTTRVGTYGDIRQHN--------GVALNyGKLSS------YTNFQLQHSDGWQ-NTAEEAIQQTEYHIT------DSR 221
Cdd:PRK13524 179 -EWHGSWNTYFNAPEHKaegatkrtNFSLS-GPLGDelsfrlYGNLNKTQADAWDiNQGHQSARTGSYAGTlpagreGVI 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 222 NKTVNRHTNWQIAERLTyqltpaIELYA----DGSIYwkriyrpcghhpgvdvkTWDLQYNNASASV---GGKwklnKTD 294
Cdd:PRK13524 257 NKDINGLLRWDFAPLQS------LELEAgysrQGNLY-----------------AGDTQNTNSDALVkslYGK----ETN 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 295 VITLDA---------DWKKHAYNYA---YTDTTLTD----GYVNGRFTNyfpyfpgDKELQSDQRLTNISLKGIFALPY- 357
Cdd:PRK13524 310 RMYRQNyalthrggwDNGVSTSNYAqyeHTRNSRLPeglaGGTEGIFNE-------KATQFSTIDLDDVMLHSEVNLPFd 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 358 ---EQQLSAGLEYRYDWLKAPM-----RVAGG------------KATDNTEALYVQDEWALLDPLHITGGLRLTRNEGFG 417
Cdd:PRK13524 383 llvNQTLTLGTEWNQQRMKDPSsntqaLTSGGaipgvsatgrspYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVG 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 418 TRLTPKLSAMLKLGD-LRLRATWSQGYKTPT-----PKELHYQ-----YIKNMNGVYLyLGNEDLKAQTSNYFGASVEYT 486
Cdd:PRK13524 463 NNWSPSLNLSQGLGDdFTLKMGIARAYKAPNlyqtnPNYILYSkgqgcYASAGNGCYL-QGNDDLKAETSVNKEIGLEFK 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 487 IGHLTLTLAPYINKVDRMITLVTIPTKQAPGeliTKYDpirVRQYQNMEDAKTYGVD----------------FTVRYQG 550
Cdd:PRK13524 542 RDGWLAGLTWFRNDYRNKIEAGYVPVGTNSV---GKTD---IYQWENVPKAVVEGLEgtlnvpvsetvnwtnnLTYMLQS 615
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 551 KHFTAGGSYSyldteanqydtendVMQKVTIDGM----AHHKANVyatwnhqfskkyQLGVGIYGRLSSKRY-YQIDG-- 623
Cdd:PRK13524 616 KNKTTGDPLS--------------IIPEYTLNSTlswqATEDLSL------------QSTFTWYGKQKPKKYnYKGQPvt 669
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 502828280 624 -----DGKGYQLWRLSTNHQIGRLLKVDAGIDNIFD----------FVDRTPHGLHLGT-TSPGRTIYASLTLRF 682
Cdd:PRK13524 670 gsatkEVSPYSIVGLSATYDVTKNVSLTGGVDNLFDkrlwregnaqTTGDLIAGAGAYTyNEPGRTYYMSLNTHF 744
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
5-654 |
6.68e-15 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 78.11 E-value: 6.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 5 KQLAIGLSLLAIGANAQTDiwRADSLqevVVTGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILSGLtASFDFSEND 84
Cdd:PRK10641 5 ASLLTALSVTAFSGWAQDT--SPDTL---VVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRL-PGVDIAQNG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 85 ---MSSRLQMNGLGNAYVLILIDGRRLHGDN-GGENDLSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRkhreqg 160
Cdd:PRK10641 79 glgQLSSLFIRGTNSSHVLVLIDGVRLNQAGiSGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITT------ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 161 vmventtrvgtygdiRQHNGVALNYGklssytnfqlQHSDGWQNTaEEAIQQTeyhITDsrNKTVNRHTNwqiaerltYQ 240
Cdd:PRK10641 153 ---------------RDKPGTTLSAG----------WGSNGYQNY-DGSTQQQ---LGD--NTRVTLAGD--------YT 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 241 LTPAIELYADGSIYW-----------KRIYRPCGHH-----------PGVDVKT-WDLQYNNASASvggkWKLNKTDVIT 297
Cdd:PRK10641 194 YTKGFDVVAYGNTGTqaqpdrdgfmsKTLWGGLEHQfndqwsgfvrgYGYDNRTdYDAYYSPGSPL----IDTRQLYSQS 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 298 LDADWKKHAYNYAytdTTLTDGYVNGRFTNYFP----YFPGDKELQSDQRltNISLKGIFALPYeQQLSAGLEYRYDWLK 373
Cdd:PRK10641 270 WDAGLRYNGGIYS---SQLIASYSHSKDYNYDPhygrYDSSATLDDMKQY--NVQWGNTVQVGH-GNISAGVDWQKQTTT 343
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 374 A-PMRVAGGKATDNTeALYVQDEwALLDPLHITGGLRLTRNEGFGTRLTPKLSAMLK-LGDLRLRATWSQGYKTPtpkel 451
Cdd:PRK10641 344 PgTGYVPDGYDQRNT-GIYLTGQ-QQIGDVTLEGAARSDDNSQFGWHGTWQTSAGWEfIDGYRFIASYGTAFKAP----- 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 452 hyqyikNMNGVYLYLGNEDLKAQTSNYFGASVEYTIGHLTLTLAPYINKVDRMITlvtiptkqapgelitkYDPIRVRqY 531
Cdd:PRK10641 417 ------NLGQLYGFYGNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLID----------------YDDHTLK-Y 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 532 QNMEDAKTYGVDFTVRYQGKHFTAGGSYSYLDTeanQYDTENDVMQKvtidgMAHHKANVYATWNhqfskKYQLGVGIYG 611
Cdd:PRK10641 474 YNVGKATIKGVEWTGNFDTGPLTHQVTLDYVDP---RNAITDEPLAR-----RAKQQVKYQLDWQ-----LYDFDWGVTY 540
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 502828280 612 RLSSKRYyqiDGDGK----------GYQLWRLSTNHQIGRLLKVDAGIDNIFD 654
Cdd:PRK10641 541 QYLGTRY---DKDYStypyqtvklgGVSLWDLAVSYPVTSHLTVRGKIANLFD 590
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
27-160 |
1.62e-08 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 57.99 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 27 ADSLQEVVVTGTGTQHLlKDAPVQTEVISRRQLQQYAGKSIEDILSGLTASFDFSEND----MSSRLQMNGL----GNAY 98
Cdd:TIGR04056 75 TQELDEVVVVGYGTQKK-KSLTGAVSTVKAKELKKVPVSNLSNALQGKVAGVIITQSSgepgGDAEIWIRGIssfgGNNS 153
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 502828280 99 VLILIDGRRlhgdngGENDLSLIDPHNIEKIEIVKGASS-ALYGSDAIAGVInIITRKHREQG 160
Cdd:TIGR04056 154 PLYVIDGVP------RDNGLSDLNPEDIESISVLKDASAtAIYGSRGANGVI-LITTKRGKEG 209
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
30-682 |
1.21e-05 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 48.87 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 30 LQEVVVTGT-----GTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILS---GLTASFDFSENdmsSRLQMNGLGNAYVLI 101
Cdd:TIGR01782 1 LDAVQVTGQrasleKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQrvpGVSIERDQGEG---RYVSVRGLGPSYNRT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 102 LIDGRRL-HGDNGG-ENDLSLIDPHNIEKIEIVKgASSALYGSDAIAGVINIITRK---HREQGV----------MVENT 166
Cdd:TIGR01782 78 TLNGRTIaSTDSGGrAFSLDLLPSELVSGVEVYK-TPTADMDEGGIGGTVDLRTRSpfdYDGRTLsgsaqggyndLAGKD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 167 TRVGTY-GDIRQHNG-------VALNYGKLSSYTNFQLQHSDGWQNTAE----EAIQQTEYHITDSRNKTvnrhTNWQIA 234
Cdd:TIGR01782 157 KPGPRGaASYSWTFGdgqfgvlLSASYQKRDFAEDNVETENWGTYTSADggaqGLYFPRGVRYRSYRNDR----ERKGVN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 235 ERLTYQLTPAIELYADG----------SIYWKRIYRPCGHHPG----------------------VDVKTWDLQYNNASA 282
Cdd:TIGR01782 233 GSLQWRPSDALELYLDTlyskydddetRQQIEFRTLNGGSTVItsnqtatsgalvqgtvanlqilVEARYNEEKETTTSL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 283 SVGGKWKLNK-------------------------------------TDVITL--------DADWKKHAYNYAY------ 311
Cdd:TIGR01782 313 TLGGEWTGDRwtldgdlgyskatrdrpdrvtrfftaptpgydfdyrgGPTLTLgtpadgddASNYTNPANGELRrtqisy 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 312 ---TDTTLT-------DGYVNG---------------RFTNYFPYFPGDKELQSDQRLTNISLKGI---FALPYEQQLSA 363
Cdd:TIGR01782 393 qkaEDSEDAaqldatfDGPFTSlkfgvryrrrdktnrGSRYRRSIIGATGASGLAGVPSDLAGAGLdggLGGPLTGWDPA 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 364 GleYRYDWLKAPMRVAGGKATDNTE-------------ALYVQDEWALLDPLHITGGLRLTRNE---------------- 414
Cdd:TIGR01782 473 D--LDAFLNAARGDAAGGGTYTYAStapntytvtedttAAYAMANFDTGLRLRGNVGVRYERTDqtsdgwqsqpaangtg 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 415 ------GFGTRLT---PKLSAMLKLGD-LRLRATWSQGYKTPTPKEL----HYQYIKNMNGVYLYLGNEDLKAQTSNYFG 480
Cdd:TIGR01782 551 svlvpvSADRDYTdvlPSLNLAYDLTDdLVLRFAASKTITRPDFGDLaantSLSDDGTGGTVTVSGGNPDLKPYESDNLD 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 481 ASVEY---TIGHLTLTLapYINKVDRMITlVTIPTKQAPGELITKYDPIRVRQYQNMEDA-KTYGVDFTV--RYQG---- 550
Cdd:TIGR01782 631 LSLEWyfgPGGLLSAAV--FYKDIKNFIV-TTTSTETNDGGGGLVVAGVLVSRPVNGGKAgKIRGVELGYqqTFDFlpgp 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 551 -KHFTAGGSYSYLDTEANqYDTENDVMQKVTIDGMAHHKANVYATWNhqfskKYQLGVgiygRLSSKR---YYQIDGDG- 625
Cdd:TIGR01782 708 lSGFGVQANYTYVDSEAD-PSVDGVQRRKLPLPGLSKNTANATLYYE-----KGGFSA----RLSYNYrsdYLLDVGGSn 777
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502828280 626 --------KGYQLWRLSTNHQIGRLLKVDAGIDNIFDFVDRTPHGLH---LGTTSPGRTIYASLTLRF 682
Cdd:TIGR01782 778 inrldryvDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTGGKqrpREYVETGRTYMLGLRYKF 845
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
36-155 |
1.44e-04 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 45.14 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 36 TGTGTQHLLKDAPVQTEVISRRQLQQYAGKSIEDILsGLTASFDFSENDMSSR---LQMNGLG------NAYvlilIDGR 106
Cdd:PRK10044 68 TGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEAL-SYTPGVSVGTRGASNTydhLIIRGFAasgqsqNNY----LDGL 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 502828280 107 RLHGDNGGEndlSLIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRK 155
Cdd:PRK10044 143 KLQGNFYND---AVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKR 188
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
8-157 |
2.05e-04 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 44.80 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 8 AIGLSLLAIGANAQTDIWRADS---LQEVVVTGTGTQHLLK--------------DAPVQTEVISRRQLQQYAGKSIEDI 70
Cdd:PRK09840 15 LAFFAGLCIGITPVAQALAAEGqtnADDTLVVEASTPSLYApdqsadpkfsqplaDTTQTITVISEQVIKDQGATNLTEA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828280 71 LSGL--TASFDFSENDMSSR---LQMNGLgNAYVLILIDGRRlhgdnggenDLSLI--DPHNIEKIEIVKGASSALYGSD 143
Cdd:PRK09840 95 LRNVpgVGTFFAGENGNTTTgdaIYMRGF-DTSNSIYVDGIR---------DIGSIsrDTFNTEQVEVIKGPSGTDYGRS 164
|
170
....*....|....
gi 502828280 144 AIAGVINIITRKHR 157
Cdd:PRK09840 165 APTGSINMISKQPR 178
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
120-155 |
9.50e-04 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 42.48 E-value: 9.50e-04
10 20 30
....*....|....*....|....*....|....*.
gi 502828280 120 LIDPHNIEKIEIVKGASSALYGSDAIAGVINIITRK 155
Cdd:PRK14050 152 QIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKR 187
|
|
| SusC_RagA_signa |
TIGR04057 |
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; This model ... |
125-154 |
7.16e-03 |
|
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; This model describes a 31-residue signature region of the SusC/RagA family of outer membrane proteins from the Bacteriodetes. While many TonB-dependent outer membrane receptors are associated with siderophore import, this family seems to include generalized nutrient receptors that may convey fairly large oligomers of protein or carbohydrate. This family occurs in high copy numbers in the most abundant species of the human gut microbiome.
Pssm-ID: 274949 [Multi-domain] Cd Length: 31 Bit Score: 34.48 E-value: 7.16e-03
10 20 30
....*....|....*....|....*....|.
gi 502828280 125 NIEKIEIVKGASS-ALYGSDAIAGVINIITR 154
Cdd:TIGR04057 1 DIESISVLKDASAaAIYGSRGANGVILITTK 31
|
|
| |
