|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13426 |
PRK13426 |
F0F1 ATP synthase subunit gamma; Provisional |
1-324 |
2.74e-177 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 237385 Cd Length: 291 Bit Score: 491.99 E-value: 2.74e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:PRK13426 1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYaETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:PRK13426 81 FSSNTSLCGGFNANIIKLLLQTIGEY-RTLGQDNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESELQADHERdlesviatKQSQEYlknrgerkdegakseevkpln 240
Cdd:PRK13426 160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEHAG--------GVANDY--------------------- 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 dnfIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:PRK13426 211 ---IIEPSADTVLNDLIPKLLSLKIYTALLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGG 287
|
....
gi 502828258 321 SVNN 324
Cdd:PRK13426 288 SMAN 291
|
|
| ATP-synt |
pfam00231 |
ATP synthase; |
3-321 |
2.35e-117 |
|
ATP synthase;
Pssm-ID: 459722 Cd Length: 285 Bit Score: 339.89 E-value: 2.35e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 3 SLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVFS 82
Cdd:pfam00231 1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 83 SNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYS-ALADHPNVHDCIEIAMELGRK 161
Cdd:pfam00231 81 SDRGLCGGFNSNVIKAARALIEELLA--EGKEVKLIVVGRKGRDYFKKRGYEVILEFTgSLGDKPTFEEAAEIADELLDA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgerkdegaksEEVKPLND 241
Cdd:pfam00231 159 FLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEE-----------------------------------EEEEESLA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 242 NFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGGS 321
Cdd:pfam00231 204 DYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGA 283
|
|
| AtpG |
COG0224 |
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ... |
1-321 |
9.82e-117 |
|
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 439994 Cd Length: 288 Bit Score: 338.28 E-value: 9.82e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:COG0224 1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:COG0224 81 ITSDRGLCGGFNSNVLKAAEELIKELQA--EGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVEselqadherdlesviatkqsqeylknrgerkdegAKSEEVKPLN 240
Cdd:COG0224 159 AFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPE----------------------------------ELEEAEWETR 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 DNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:COG0224 205 ADYIFEPSPEEILDALLPRYLESQIYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGG 284
|
.
gi 502828258 321 S 321
Cdd:COG0224 285 A 285
|
|
| F1-ATPase_gamma |
cd12151 |
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ... |
2-321 |
1.26e-99 |
|
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.
Pssm-ID: 213394 Cd Length: 282 Bit Score: 294.87 E-value: 1.26e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 2 PSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVF 81
Cdd:cd12151 1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 82 SSNSSLCGGFNANIIKqmthAVNEYAETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGRK 161
Cdd:cd12151 81 TSDRGLCGGFNSNIIK----AAEELIKEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgerkdegakSEEVKPLND 241
Cdd:cd12151 157 FLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEE----------------------------------EEESEGSRS 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 242 NFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGGS 321
Cdd:cd12151 203 DYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
|
|
| ATPsyn_F1gamma |
TIGR01146 |
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ... |
2-320 |
1.25e-80 |
|
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273469 Cd Length: 286 Bit Score: 246.44 E-value: 1.25e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 2 PSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVF 81
Cdd:TIGR01146 1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 82 SSNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGRK 161
Cdd:TIGR01146 81 TSDRGLCGGYNSNVLKRVRARAKELKA--AGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVeselQADHErdlesviATKQSQEYlknrgerkdegakseevkplnd 241
Cdd:TIGR01146 159 FDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSA----QGPDE-------GFKFSQDY---------------------- 205
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 502828258 242 nfIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:TIGR01146 206 --IFEPDEEEILDDLLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAG 282
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13426 |
PRK13426 |
F0F1 ATP synthase subunit gamma; Provisional |
1-324 |
2.74e-177 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 237385 Cd Length: 291 Bit Score: 491.99 E-value: 2.74e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:PRK13426 1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYaETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:PRK13426 81 FSSNTSLCGGFNANIIKLLLQTIGEY-RTLGQDNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESELQADHERdlesviatKQSQEYlknrgerkdegakseevkpln 240
Cdd:PRK13426 160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAEHAG--------GVANDY--------------------- 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 dnfIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:PRK13426 211 ---IIEPSADTVLNDLIPKLLSLKIYTALLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGG 287
|
....
gi 502828258 321 SVNN 324
Cdd:PRK13426 288 SMAN 291
|
|
| ATP-synt |
pfam00231 |
ATP synthase; |
3-321 |
2.35e-117 |
|
ATP synthase;
Pssm-ID: 459722 Cd Length: 285 Bit Score: 339.89 E-value: 2.35e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 3 SLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVFS 82
Cdd:pfam00231 1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 83 SNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYS-ALADHPNVHDCIEIAMELGRK 161
Cdd:pfam00231 81 SDRGLCGGFNSNVIKAARALIEELLA--EGKEVKLIVVGRKGRDYFKKRGYEVILEFTgSLGDKPTFEEAAEIADELLDA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgerkdegaksEEVKPLND 241
Cdd:pfam00231 159 FLAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEE-----------------------------------EEEEESLA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 242 NFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGGS 321
Cdd:pfam00231 204 DYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGA 283
|
|
| AtpG |
COG0224 |
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ... |
1-321 |
9.82e-117 |
|
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 439994 Cd Length: 288 Bit Score: 338.28 E-value: 9.82e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:COG0224 1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:COG0224 81 ITSDRGLCGGFNSNVLKAAEELIKELQA--EGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVEselqadherdlesviatkqsqeylknrgerkdegAKSEEVKPLN 240
Cdd:COG0224 159 AFLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPE----------------------------------ELEEAEWETR 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 DNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:COG0224 205 ADYIFEPSPEEILDALLPRYLESQIYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGG 284
|
.
gi 502828258 321 S 321
Cdd:COG0224 285 A 285
|
|
| F1-ATPase_gamma |
cd12151 |
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ... |
2-321 |
1.26e-99 |
|
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.
Pssm-ID: 213394 Cd Length: 282 Bit Score: 294.87 E-value: 1.26e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 2 PSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVF 81
Cdd:cd12151 1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 82 SSNSSLCGGFNANIIKqmthAVNEYAETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGRK 161
Cdd:cd12151 81 TSDRGLCGGFNSNIIK----AAEELIKEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgerkdegakSEEVKPLND 241
Cdd:cd12151 157 FLNGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEE----------------------------------EEESEGSRS 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 242 NFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGGS 321
Cdd:cd12151 203 DYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
|
|
| PRK05621 |
PRK05621 |
F0F1 ATP synthase subunit gamma; Validated |
1-321 |
5.73e-94 |
|
F0F1 ATP synthase subunit gamma; Validated
Pssm-ID: 235535 Cd Length: 284 Bit Score: 280.46 E-value: 5.73e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSfLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:PRK05621 1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISH-LASASEYDHPLLVEREVKRVGYIV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYAETigRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:PRK05621 80 VTSDRGLCGGYNSNIIKKVLELIKELEAQ--GKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviATKQSQEYlknrgerkdegakseevkpln 240
Cdd:PRK05621 158 AYDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEE-------------EEETSWDY--------------------- 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 dnfIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:PRK05621 204 ---EYEPDAEEILDALLPRYVESQIYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGG 280
|
.
gi 502828258 321 S 321
Cdd:PRK05621 281 A 281
|
|
| ATPsyn_F1gamma |
TIGR01146 |
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ... |
2-320 |
1.25e-80 |
|
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273469 Cd Length: 286 Bit Score: 246.44 E-value: 1.25e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 2 PSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVVF 81
Cdd:TIGR01146 1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 82 SSNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGRK 161
Cdd:TIGR01146 81 TSDRGLCGGYNSNVLKRVRARAKELKA--AGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 162 FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVeselQADHErdlesviATKQSQEYlknrgerkdegakseevkplnd 241
Cdd:TIGR01146 159 FDAGEFDELYIVYNKFVSSISQEPTVKQLLPLSA----QGPDE-------GFKFSQDY---------------------- 205
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 502828258 242 nfIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:TIGR01146 206 --IFEPDEEEILDDLLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAG 282
|
|
| PRK13423 |
PRK13423 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
1.20e-79 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 237384 Cd Length: 288 Bit Score: 244.20 E-value: 1.20e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:PRK13423 1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYAEtiGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMELGR 160
Cdd:PRK13423 81 VTSDRGLCGGFNSNLCKAAERFLKENKD--EFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 161 KFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgerKDEGAKSEevkpln 240
Cdd:PRK13423 159 GYLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEA----------------------------ADDEYLPE------ 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 241 dnFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIVGG 320
Cdd:PRK13423 205 --YIYEPSRDALLAELLPKHVEVQIYRALLESVASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSG 282
|
.
gi 502828258 321 S 321
Cdd:PRK13423 283 A 283
|
|
| PRK13425 |
PRK13425 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
3.17e-58 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 139564 Cd Length: 291 Bit Score: 189.25 E-value: 3.17e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLA-AEAEAQTIYDQERPVKRAALV 79
Cdd:PRK13425 1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAkVDTSLNPLLSPRSEVNKVLVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 80 VFSSNSSLCGGFNANIIKQMTHAVNE-YAETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMEL 158
Cdd:PRK13425 81 LITSDRGLCGAFNTNIIKLAQKVIHEdYAALHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAETA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 159 GRKFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVEselqadherdlesviatkqsqeylknrgERKDEGAkseevkp 238
Cdd:PRK13425 161 SGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPE----------------------------KPGAEGG------- 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 239 lnDNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIV 318
Cdd:PRK13425 206 --SDYIYEPSPAAIIDELVPKHLNTQVWRMMLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIV 283
|
...
gi 502828258 319 GGS 321
Cdd:PRK13425 284 AGA 286
|
|
| PRK14111 |
PRK14111 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
5.45e-58 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 184515 Cd Length: 290 Bit Score: 188.47 E-value: 5.45e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLA---AEAEAQTIYDQERPVKRAA 77
Cdd:PRK14111 1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTArtvGAARVGPLLEKRPTVKRVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 78 LVVFSSNSSLCGGFNANIIKQMTHAVNEyaETIGRDNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAME 157
Cdd:PRK14111 81 LILVTPDRGLAGSLNANVLRRAIRFITD--ERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 158 LGRKFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDveselqADHERDLESViatkqsqeylknrgerkdegakseevk 237
Cdd:PRK14111 159 AINGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIE------PPEISTTTVV--------------------------- 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 238 plndNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDI 317
Cdd:PRK14111 206 ----DYTYEPSPEEVLRALLPRFVEVQLYQAVLESIASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEI 281
|
....
gi 502828258 318 VGGS 321
Cdd:PRK14111 282 ASGA 285
|
|
| PRK13424 |
PRK13424 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
7.27e-58 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 172047 Cd Length: 291 Bit Score: 188.42 E-value: 7.27e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLA-AEAEAQTIYDQERPVKRAALV 79
Cdd:PRK13424 1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASrADSSAHPLLEVREEIKTCGIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 80 VFSSNSSLCGGFNANIIKQ-MTHAVNEYAEtiGRDnVEIYPIGRKVYEKARKMGLNVqgeYSALADHPNVHDcIEIAMEL 158
Cdd:PRK13424 81 LITSDRGLCGSFNANLINAaLKLAKQKTAE--GKT-VKFYCVGKKGRDAIRKTDFEI---VTAYADQMTSFD-FQLANSI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 159 GRK----FAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESElqadherdlesviatkqsqeylknrgERKDEGAKSE 234
Cdd:PRK13424 154 GLEvidgYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEA--------------------------EEEEAGASSE 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 235 evkplndnFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSEL 314
Cdd:PRK13424 208 --------YIYEPSVEGLLAELLPRFIKVQIYRGLLDTSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITREL 279
|
....*..
gi 502828258 315 LDIVGGS 321
Cdd:PRK13424 280 MDIVGGA 286
|
|
| PRK13427 |
PRK13427 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
1.32e-49 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 172049 Cd Length: 289 Bit Score: 167.04 E-value: 1.32e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYdQERP--VKRAAL 78
Cdd:PRK13427 1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPY-LRRPekIRTVAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 79 VVFSSNSSLCGGFNANIIKQMTHAVNEYaETIGRdNVEIYPIGRKVYEKARKMGLNVQGEYSALADHPNVHDCIEIAMEL 158
Cdd:PRK13427 80 LIITANRGLCGGFNSNLNRMAKARIAEL-KKKGV-NVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 159 GRKFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVEselqadherdlesviatkqsqeylknrgERKDEGAkseevkp 238
Cdd:PRK13427 158 MERFANESVDAVEIASTVYYSAASQKPETTRVLPLEPP----------------------------TAAAEGS------- 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 239 LNDNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDIV 318
Cdd:PRK13427 203 VQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANASEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIV 282
|
...
gi 502828258 319 GGS 321
Cdd:PRK13427 283 GGA 285
|
|
| PRK14110 |
PRK14110 |
F0F1 ATP synthase subunit gamma; Provisional |
1-318 |
4.77e-42 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 184514 Cd Length: 291 Bit Score: 147.22 E-value: 4.77e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSL--KEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPY-EELLEHILKSFLAAEAEAQTIYDQeRPVKRAA 77
Cdd:PRK14110 1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYsEKLYELISDLAAHIDRESHPLLER-REEKNVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 78 LVVFSSNSSLCGGFNANIIKQMTHAVNEYAETigRDNVEIYPIGRKVYEKARKMGLNVQGEYSAL-ADHPNVHDCIEIAM 156
Cdd:PRK14110 80 LVIITADRGLAGAFNSNVIKTAERLIQEKQSE--GVRVNLILIGRKGVQYFSKRGYNIIKSYEDVfRKEINFSVVKEVGG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 157 ELGRKFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIDVESELQadherdlesviatkqsqeylknrgerkdegaKSEEV 236
Cdd:PRK14110 158 ILASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEK-------------------------------KLDEL 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 237 KPLNdnfiVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLD 316
Cdd:PRK14110 207 SVYN----IEVSEEEFLDKLLQLYLNYQLYRALVESNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELID 282
|
..
gi 502828258 317 IV 318
Cdd:PRK14110 283 IV 284
|
|
| PRK13422 |
PRK13422 |
F0F1 ATP synthase subunit gamma; Provisional |
1-321 |
1.39e-33 |
|
F0F1 ATP synthase subunit gamma; Provisional
Pssm-ID: 184046 Cd Length: 298 Bit Score: 125.16 E-value: 1.39e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 1 MPSLKEIKGRIASVNSTRKITSAMKMVASSKLHHAQVAIQNMLPYEELLEHILKSFLAAEAEAQTIYDQERPVKRAALVV 80
Cdd:PRK13422 1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 81 FSSNSSLCGGFNANIIKQMTHAVNEYAETigRDNVEIYPIGRKV---YEKARKMGLNVQGEYSALADHPNVHDCIEIAME 157
Cdd:PRK13422 81 TSTDRGLCGGLNINLFKHVLKEIKNNIED--RVGVDVCVIGSKAenfFAKLKDVNIVATAHYNDKDKEGSIRAIGGAVKV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 158 LGRKFAQGEIDKVELIYHHFKSAGSQVLTRKTFLPIdveselqadheRDLesviatkQSQEYLKNRGERKDEGakseevk 237
Cdd:PRK13422 159 MLDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPI-----------QDI-------FSAEEIKANKEKATKG------- 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502828258 238 plNDNFIVEPDMNCVLSLLMPKLAHLMLYTALLDSNASEHAARMVAMQTATDNADELLRQLNLQYNKSRQQAITSELLDI 317
Cdd:PRK13422 214 --HWDYIYERDIEEVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEI 291
|
....
gi 502828258 318 VGGS 321
Cdd:PRK13422 292 CSGA 295
|
|
|