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Conserved domains on  [gi|502737413|ref|WP_012972397|]
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DUF302 domain-containing protein [Allochromatium vinosum]

Protein Classification

DUF302 domain-containing protein( domain architecture ID 10201466)

DUF302 domain-containing protein may form homodimers

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF302 cd14797
Uncharacterized domain family DUF302; These domains are mostly found in bacterial ...
 28-151 1.54e-28

Uncharacterized domain family DUF302; These domains are mostly found in bacterial single-domain proteins and have been shown to form homodimers; they may also bind zinc. Also characterized as COG3439.


:

Pssm-ID: 269820  Cd Length: 124  Bit Score: 101.86  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502737413  28 LKEKPSPYAFDATVTAITEKAQAQGWEVAKVFDFQTALVAHQRPDPgRIKVLKLCSPEYASRMFSRDETklVAVMAPCSI 107
Cdd:cd14797    1 LITVTSPYSFDETVERLKEALKEEGFGVLAEIDHQATLKELGLDLP-PYTILGFCNPKLATPLLQADPR--IGLLLPCRV 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 502737413 108 AVYEKADGRTYVSTMNMALMWRLMGDD-IGPILADIAEEDARILD 151
Cdd:cd14797   78 LVYEDDDGKVWVSYMDPSALAALFGNPeLKEVAKEVEEKLEKIID 122
 
Name Accession Description Interval E-value
DUF302 cd14797
Uncharacterized domain family DUF302; These domains are mostly found in bacterial ...
 28-151 1.54e-28

Uncharacterized domain family DUF302; These domains are mostly found in bacterial single-domain proteins and have been shown to form homodimers; they may also bind zinc. Also characterized as COG3439.


Pssm-ID: 269820  Cd Length: 124  Bit Score: 101.86  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502737413  28 LKEKPSPYAFDATVTAITEKAQAQGWEVAKVFDFQTALVAHQRPDPgRIKVLKLCSPEYASRMFSRDETklVAVMAPCSI 107
Cdd:cd14797    1 LITVTSPYSFDETVERLKEALKEEGFGVLAEIDHQATLKELGLDLP-PYTILGFCNPKLATPLLQADPR--IGLLLPCRV 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 502737413 108 AVYEKADGRTYVSTMNMALMWRLMGDD-IGPILADIAEEDARILD 151
Cdd:cd14797   78 LVYEDDDGKVWVSYMDPSALAALFGNPeLKEVAKEVEEKLEKIID 122
COG3439 COG3439
Uncharacterized conserved protein, DUF302 family [Function unknown];
28-151 6.43e-26

Uncharacterized conserved protein, DUF302 family [Function unknown];


Pssm-ID: 442664  Cd Length: 128  Bit Score: 95.35  E-value: 6.43e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502737413  28 LKEKPSPYAFDATVTAITEKAQAQGWEVAKVFDFQTALVAHQRPDPgRIKVLKLCSPEYASRMFSRDetKLVAVMAPCSI 107
Cdd:COG3439    6 LITVESPKSFDETVERLEEALKEEGFGVLAEIDVSATLKELGLDLR-PYRILGFCNPKLATRLLQAD--PEIGLLLPCRV 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 502737413 108 AVYEKADGRTYVSTMNMALMWRLMGD-DIGPILADIAEEDARILD 151
Cdd:COG3439   83 LVYEDEDGKVWVSYMDPSALAKLFGNpELKEVAEEVEEALEKILE 127
DUF302 pfam03625
Domain of unknown function DUF302; Domain is found in an undescribed set of proteins. Normally ...
 59-124 2.80e-10

Domain of unknown function DUF302; Domain is found in an undescribed set of proteins. Normally occurs uniquely within a sequence, but is found as a tandem repeat. Shows interesting phylogenetic distribution with majority of examples in bacteria and archaea, but it is also found in some fungal proteins. The hypothetical protein TT1751 from Thermus thermophilus has a beta-alpha-beta(4)-alpha structural fold.


Pssm-ID: 460993  Cd Length: 63  Bit Score: 52.87  E-value: 2.80e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 502737413   59 FDFQTALVAHQRPDPGRIKVLKLCSPEYASRMFSRDETklVAVMAPCSIAVYEKaDGRTYVSTMNM 124
Cdd:pfam03625   1 IDHSATLKAKGGLDLPPYRILGFCNPKLATELLQADPA--IGLLLPCRVLVYEE-DGKTWVSYMDP 63
 
Name Accession Description Interval E-value
DUF302 cd14797
Uncharacterized domain family DUF302; These domains are mostly found in bacterial ...
 28-151 1.54e-28

Uncharacterized domain family DUF302; These domains are mostly found in bacterial single-domain proteins and have been shown to form homodimers; they may also bind zinc. Also characterized as COG3439.


Pssm-ID: 269820  Cd Length: 124  Bit Score: 101.86  E-value: 1.54e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502737413  28 LKEKPSPYAFDATVTAITEKAQAQGWEVAKVFDFQTALVAHQRPDPgRIKVLKLCSPEYASRMFSRDETklVAVMAPCSI 107
Cdd:cd14797    1 LITVTSPYSFDETVERLKEALKEEGFGVLAEIDHQATLKELGLDLP-PYTILGFCNPKLATPLLQADPR--IGLLLPCRV 77

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 502737413 108 AVYEKADGRTYVSTMNMALMWRLMGDD-IGPILADIAEEDARILD 151
Cdd:cd14797   78 LVYEDDDGKVWVSYMDPSALAALFGNPeLKEVAKEVEEKLEKIID 122
COG3439 COG3439
Uncharacterized conserved protein, DUF302 family [Function unknown];
28-151 6.43e-26

Uncharacterized conserved protein, DUF302 family [Function unknown];


Pssm-ID: 442664  Cd Length: 128  Bit Score: 95.35  E-value: 6.43e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502737413  28 LKEKPSPYAFDATVTAITEKAQAQGWEVAKVFDFQTALVAHQRPDPgRIKVLKLCSPEYASRMFSRDetKLVAVMAPCSI 107
Cdd:COG3439    6 LITVESPKSFDETVERLEEALKEEGFGVLAEIDVSATLKELGLDLR-PYRILGFCNPKLATRLLQAD--PEIGLLLPCRV 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 502737413 108 AVYEKADGRTYVSTMNMALMWRLMGD-DIGPILADIAEEDARILD 151
Cdd:COG3439   83 LVYEDEDGKVWVSYMDPSALAKLFGNpELKEVAEEVEEALEKILE 127
DUF302 pfam03625
Domain of unknown function DUF302; Domain is found in an undescribed set of proteins. Normally ...
 59-124 2.80e-10

Domain of unknown function DUF302; Domain is found in an undescribed set of proteins. Normally occurs uniquely within a sequence, but is found as a tandem repeat. Shows interesting phylogenetic distribution with majority of examples in bacteria and archaea, but it is also found in some fungal proteins. The hypothetical protein TT1751 from Thermus thermophilus has a beta-alpha-beta(4)-alpha structural fold.


Pssm-ID: 460993  Cd Length: 63  Bit Score: 52.87  E-value: 2.80e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 502737413   59 FDFQTALVAHQRPDPGRIKVLKLCSPEYASRMFSRDETklVAVMAPCSIAVYEKaDGRTYVSTMNM 124
Cdd:pfam03625   1 IDHSATLKAKGGLDLPPYRILGFCNPKLATELLQADPA--IGLLLPCRVLVYEE-DGKTWVSYMDP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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